Pregenerated sensors for LINC02152 (Homo sapiens)
Ensembl gene IDs: ENSG00000261319Ensembl transcript IDs: ENST00000566208.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGGCTTTGCTCGTGCTGTGTGCTTTTCTGTTGCATCTTCTCCTGCTaGCCCTTGACCTCAAACACAGGGAACACCTGGACTACCTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: WLCSCCVLFCCIFSC*PLTSNTGNTWTTWS Trigger: TGACCAGGTAGTCCAGGTGTTCCCTGTGTTTGAGGTCAAGGGGCAGCAGGAGAAGATGCAACAGAAAAGCACACAGCACGAGCAAAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566208.1 |
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| CDS CCA 90 bp | TCCTGCTGCCCCTTGACCTCAAACACAGGGAACACCTGGACTACCTaGTCAGACTTTAAGAGACAGCACAGCTGCTACCTTCTCCGGATT | + |
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Preference number: 5 (lower is better) Translates to: SCCPLTSNTGNTWTT*SDFKRQHSCYLLRI Trigger: AATCCGGAGAAGGTAGCAGCTGTGCTGTCTCTTAAAGTCTGACCAGGTAGTCCAGGTGTTCCCTGTGTTTGAGGTCAAGGGGCAGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566208.1 |
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| CDS CCA 90 bp | TGCATCTTCTCCTGCTGCCCCTTGACCTCAAACACAGGGAACACCTaGACTACCTGGTCAGACTTTAAGAGACAGCACAGCTGCTACCTT | + |
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Preference number: 5 (lower is better) Translates to: CIFSCCPLTSNTGNT*TTWSDFKRQHSCYL Trigger: AAGGTAGCAGCTGTGCTGTCTCTTAAAGTCTGACCAGGTAGTCCAGGTGTTCCCTGTGTTTGAGGTCAAGGGGCAGCAGGAGAAGATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566208.1 |
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| CDS GCA 90 bp | GCTGTTTTGTGCCCGTCTGTCTTAGAATATTTTGTTTCTACCACCTaGATACTCTTACCTGGGCTCCCACTCCACTGCTCAACCATTGCC | + |
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Preference number: 5 (lower is better) Translates to: AVLCPSVLEYFVSTT*ILLPGLPLHCSTIA Trigger: GGCAATGGTTGAGCAGTGGAGTGGGAGCCCAGGTAAGAGTATGCAGGTGGTAGAAACAAAATATTCTAAGACAGACGGGCACAAAACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566208.1 |
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| CDS CCA 90 bp | GTAGCAGCAGAAGCTGTTGCAGGTGATAGCTGTTTTTCAGCTATGTaGCTTTGCTCGTGCTGTGTGCTTTTCTGTTGCATCTTCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: VAAEAVAGDSCFSAM*LCSCCVLFCCIFSC Trigger: GCAGGAGAAGATGCAACAGAAAAGCACACAGCACGAGCAAAGCCACATAGCTGAAAAACAGCTATCACCTGCAACAGCTTCTGCTGCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566208.1 |
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| CDS CCA 90 bp | GTCTGTCTTAGAATATTTTGTTTCTACCACCTGCATACTCTTACCTaGGCTCCCACTCCACTGCTCAACCATTGCCTTGGGAACTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: VCLRIFCFYHLHTLT*APTPLLNHCLGNSL Trigger: AAGGGAGTTCCCAAGGCAATGGTTGAGCAGTGGAGTGGGAGCCCAGGTAAGAGTATGCAGGTGGTAGAAACAAAATATTCTAAGACAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566208.1 |
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| CDS CCA 72 bp | TCCTGCTGCCCCTTGACCTCAAACACAGGGAACACCTaGACTACCTGGTCAGACTTTAAGAGACAGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: SCCPLTSNTGNT*TTWSDFKRQHS Trigger: GCTGTGCTGTCTCTTAAAGTCTGACCAGGTAGTCCAGGTGTTCCCTGTGTTTGAGGTCAAGGGGCAGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566208.1 |
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| CDS GCA 72 bp | ACCACCTGCATACTCTTACCTGGGCTCCCACTCCACTaGTCAACCATTGCCTTGGGAACTCCCTTCCATTAT | + |
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Preference number: 6 (lower is better) Translates to: TTCILLPGLPLH*STIALGTPFHY Trigger: ATAATGGAAGGGAGTTCCCAAGGCAATGGTTGAGCAGTGGAGTGGGAGCCCAGGTAAGAGTATGCAGGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566208.1 |
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| CDS GCA 72 bp | TCGTGCTGTGTGCTTTTCTGTTGCATCTTCTCCTGCTaGCCCTTGACCTCAAACACAGGGAACACCTGGACT | + |
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Preference number: 6 (lower is better) Translates to: SCCVLFCCIFSC*PLTSNTGNTWT Trigger: AGTCCAGGTGTTCCCTGTGTTTGAGGTCAAGGGGCAGCAGGAGAAGATGCAACAGAAAAGCACACAGCACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566208.1 |
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| CDS CCA 72 bp | CCCTTGACCTCAAACACAGGGAACACCTGGACTACCTaGTCAGACTTTAAGAGACAGCACAGCTGCTACCTT | + |
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Preference number: 6 (lower is better) Translates to: PLTSNTGNTWTT*SDFKRQHSCYL Trigger: AAGGTAGCAGCTGTGCTGTCTCTTAAAGTCTGACCAGGTAGTCCAGGTGTTCCCTGTGTTTGAGGTCAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566208.1 |
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| CDS CCA 72 bp | AGAATATTTTGTTTCTACCACCTGCATACTCTTACCTaGGCTCCCACTCCACTGCTCAACCATTGCCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: RIFCFYHLHTLT*APTPLLNHCLG Trigger: CCCAAGGCAATGGTTGAGCAGTGGAGTGGGAGCCCAGGTAAGAGTATGCAGGTGGTAGAAACAAAATATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566208.1 |
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| CDS CCA 72 bp | GAAGCTGTTGCAGGTGATAGCTGTTTTTCAGCTATGTaGCTTTGCTCGTGCTGTGTGCTTTTCTGTTGCATC | + |
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Preference number: 6 (lower is better) Translates to: EAVAGDSCFSAM*LCSCCVLFCCI Trigger: GATGCAACAGAAAAGCACACAGCACGAGCAAAGCCACATAGCTGAAAAACAGCTATCACCTGCAACAGCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566208.1 |
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| CDS CCA 72 bp | TCAAAATGGAAATGCTTCCTTTCCCTTGATCCCAACTaGCCCACATGCCCAAATCCATCGCTGTATGGTATG | + |
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Preference number: 6 (lower is better) Translates to: SKWKCFLSLDPN*PTCPNPSLYGM Trigger: CATACCATACAGCGATGGATTTGGGCATGTGGGCCAGTTGGGATCAAGGGAAAGGAAGCATTTCCATTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566208.1 |
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| CDS CAA 72 bp | TTCCTAGGGCTGGGACTGTCCTGTCAGATCACGTTGTaGGCTGATACTGGAATAAAATCTAAGAGGAGTACA | + |
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Preference number: 6 (lower is better) Translates to: FLGLGLSCQITL*ADTGIKSKRST Trigger: TGTACTCCTCTTAGATTTTATTCCAGTATCAGCCAACAACGTGATCTGACAGGACAGTCCCAGCCCTAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566208.1 |
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| CDS CAA 72 bp | CATTTCCTAGGGCTGGGACTGTCCTGTCAGATCACGTaGTTGGCTGATACTGGAATAAAATCTAAGAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: HFLGLGLSCQIT*LADTGIKSKRS Trigger: ACTCCTCTTAGATTTTATTCCAGTATCAGCCAACAACGTGATCTGACAGGACAGTCCCAGCCCTAGGAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566208.1 |
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