Pregenerated sensors for LINC02149 (Homo sapiens)
Ensembl gene IDs: ENSG00000249332Ensembl transcript IDs: ENST00000502680.1, ENST00000511443.1, ENST00000651224.1
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAGGACAGGGCACAGGGCCAGATGGCTGGTTTCACCACTTGCCGATaGCAGGGCACCATTTTGGGTCCCCCATCTTGCTCTCATTGTCTA | + |
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Preference number: 5 (lower is better) Translates to: EDRAQGQMAGFTTCR*QGTILGPPSCSHCL Trigger: TAGACAATGAGAGCAAGATGGGGGACCCAAAATGGTGCCCTGGCATCGGCAAGTGGTGAAACCAGCCATCTGGCCCTGTGCCCTGTCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000511443.1 ENST00000651224.1 |
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| CDS GCA 90 bp | ACTTCTGAGGACAGGGCACAGGGCCAGATGGCTGGTTTCACCACTTaGCGATGCCAGGGCACCATTTTGGGTCCCCCATCTTGCTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: TSEDRAQGQMAGFTT*RCQGTILGPPSCSH Trigger: ATGAGAGCAAGATGGGGGACCCAAAATGGTGCCCTGGCATCGGCAAGTGGTGAAACCAGCCATCTGGCCCTGTGCCCTGTCCTCAGAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000511443.1 ENST00000651224.1 |
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| CDS GCA 90 bp | ACAGGGAATGTCCTTGAGTCCAAGTGGGCTGTCTCCTTAGGGGTGTaGTTGGGTGTCTATATCTGCTGCATATGTGCAGAGAATGATGCA | + |
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Preference number: 5 (lower is better) Translates to: TGNVLESKWAVSLGV*LGVYICCICAENDA Trigger: TGCATCATTCTCTGCACATATGCAGCAGATATAGACACCCAAGCACACCCCTAAGGAGACAGCCCACTTGGACTCAAGGACATTCCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000502680.1 ENST00000651224.1 |
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| CDS GCA 90 bp | ACGTTGGCTGACCCACAGAAAGCAAACCGGCTCTCACATGTTTCTTaGTCTCTCCAGAGCACACATCCATCCTTAAAGCTGTTTGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: TLADPQKANRLSHVS*SLQSTHPSLKLFGG Trigger: TCCACCAAACAGCTTTAAGGATGGATGTGTGCTCTGGAGAGAGCAAGAAACATGTGAGAGCCGGTTTGCTTTCTGTGGGTCAGCCAACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502680.1 ENST00000651224.1 |
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| CDS CCA 90 bp | ATCTTGCTCTCATTGTCTAGTGTTTTATGGCACCTCTTTCCACTATaGGGAGCTTTTTATCCATGTCACACATCTTCAAATACCTATGAG | + |
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Preference number: 5 (lower is better) Translates to: ILLSLSSVLWHLFPL*GAFYPCHTSSNTYE Trigger: CTCATAGGTATTTGAAGATGTGTGACATGGATAAAAAGCTCCCCATAGTGGAAAGAGGTGCCATAAAACACTAGACAATGAGAGCAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000651224.1 |
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| CDS CAA 72 bp | GGACAGGGCACAGGGCCAGATGGCTGGTTTCACCACTaGCCGATGCCAGGGCACCATTTTGGGTCCCCCATC | + |
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Preference number: 6 (lower is better) Translates to: GQGTGPDGWFHH*PMPGHHFGSPI Trigger: GATGGGGGACCCAAAATGGTGCCCTGGCATCGGCAAGTGGTGAAACCAGCCATCTGGCCCTGTGCCCTGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000511443.1 ENST00000651224.1 |
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| CDS GCA 72 bp | GACAGGGCACAGGGCCAGATGGCTGGTTTCACCACTTaGCGATGCCAGGGCACCATTTTGGGTCCCCCATCT | + |
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Preference number: 6 (lower is better) Translates to: DRAQGQMAGFTT*RCQGTILGPPS Trigger: AGATGGGGGACCCAAAATGGTGCCCTGGCATCGGCAAGTGGTGAAACCAGCCATCTGGCCCTGTGCCCTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000511443.1 ENST00000651224.1 |
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| CDS GCA 72 bp | GCACAGGGCCAGATGGCTGGTTTCACCACTTGCCGATaGCAGGGCACCATTTTGGGTCCCCCATCTTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: AQGQMAGFTTCR*QGTILGPPSCS Trigger: AGAGCAAGATGGGGGACCCAAAATGGTGCCCTGGCATCGGCAAGTGGTGAAACCAGCCATCTGGCCCTGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000511443.1 ENST00000651224.1 |
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| CDS CAA 90 bp | GGCCAGATGGCTGGTTTCACCACTTGCCGATGCCAGGGCACCATTTaGGGTCCCCCATCTTGCTCTCATTGTCTAGTGTTTTATGGCACC | + |
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Preference number: 6 (lower is better) Translates to: GQMAGFTTCRCQGTI*GPPSCSHCLVFYGT Trigger: GGTGCCATAAAACACTAGACAATGAGAGCAAGATGGGGGACCCAAAATGGTGCCCTGGCATCGGCAAGTGGTGAAACCAGCCATCTGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000511443.1 ENST00000651224.1 |
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| CDS CAA 72 bp | CTCAGTGAAATGACAGTCATAGGACTGGCGGAGACGTaGGCTGACCCACAGAAAGCAAACCGGCTCTCACAT | + |
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Preference number: 6 (lower is better) Translates to: LSEMTVIGLAET*ADPQKANRLSH Trigger: ATGTGAGAGCCGGTTTGCTTTCTGTGGGTCAGCCAACGTCTCCGCCAGTCCTATGACTGTCATTTCACTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502680.1 ENST00000651224.1 |
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| CDS CAA 72 bp | GCTGGTTTCACCACTTGCCGATGCCAGGGCACCATTTaGGGTCCCCCATCTTGCTCTCATTGTCTAGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: AGFTTCRCQGTI*GPPSCSHCLVF Trigger: AAACACTAGACAATGAGAGCAAGATGGGGGACCCAAAATGGTGCCCTGGCATCGGCAAGTGGTGAAACCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000511443.1 ENST00000651224.1 |
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| CDS CAA 90 bp | GGGAATGTCCTTGAGTCCAAGTGGGCTGTCTCCTTAGGGGTGTGCTaGGGTGTCTATATCTGCTGCATATGTGCAGAGAATGATGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: GNVLESKWAVSLGVC*GVYICCICAENDAG Trigger: TCCTGCATCATTCTCTGCACATATGCAGCAGATATAGACACCCAAGCACACCCCTAAGGAGACAGCCCACTTGGACTCAAGGACATTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000502680.1 ENST00000651224.1 |
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| CDS TCA 72 bp | CTAGGGCTTTCCGGAGCCCAGTGTGATTTGCACATCTaGTCTTCATCGATCCCAGTATCAGATGTGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: LGLSGAQCDLHI*SSSIPVSDVLW Trigger: CCACAGCACATCTGATACTGGGATCGATGAAGATCAGATGTGCAAATCACACTGGGCTCCGGAAAGCCCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511443.1 |
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| CDS CAA 72 bp | CTTGAGTCCAAGTGGGCTGTCTCCTTAGGGGTGTGCTaGGGTGTCTATATCTGCTGCATATGTGCAGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: LESKWAVSLGVC*GVYICCICAEN Trigger: ATTCTCTGCACATATGCAGCAGATATAGACACCCAAGCACACCCCTAAGGAGACAGCCCACTTGGACTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000502680.1 ENST00000651224.1 |
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| CDS CAA 90 bp | ATATCAATCCTCAGTGAAATGACAGTCATAGGACTGGCGGAGACGTaGGCTGACCCACAGAAAGCAAACCGGCTCTCACATGTTTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: ISILSEMTVIGLAET*ADPQKANRLSHVSC Trigger: GCAAGAAACATGTGAGAGCCGGTTTGCTTTCTGTGGGTCAGCCAACGTCTCCGCCAGTCCTATGACTGTCATTTCACTGAGGATTGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502680.1 ENST00000651224.1 |
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| CDS GCA 72 bp | GTCTCCTTAGGGGTGTGCTTGGGTGTCTATATCTGCTaGATATGTGCAGAGAATGATGCAGGAGGCTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: VSLGVCLGVYIC*ICAENDAGGFS Trigger: TGAAAAGCCTCCTGCATCATTCTCTGCACATATGCAGCAGATATAGACACCCAAGCACACCCCTAAGGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000502680.1 ENST00000651224.1 |
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| CDS GCA 72 bp | TGCACATCTGATCTTCATCGATCCCAGTATCAGATGTaGTGTGGAGAGGTCTCAGCCCTGTCATTTAACATA | + |
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Preference number: 6 (lower is better) Translates to: CTSDLHRSQYQM*CGEVSALSFNI Trigger: TATGTTAAATGACAGGGCTGAGACCTCTCCACAGCACATCTGATACTGGGATCGATGAAGATCAGATGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511443.1 |
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| CDS CAA 72 bp | CAGAGCAGAGGTCTGAGCTTGGGGAGTCTGCCATTATaGGTAGTGGACTTCATTAGCTGTTTAAAAACTCTA | + |
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Preference number: 6 (lower is better) Translates to: QSRGLSLGSLPL*VVDFISCLKTL Trigger: TAGAGTTTTTAAACAGCTAATGAAGTCCACTACCAATAATGGCAGACTCCCCAAGCTCAGACCTCTGCTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000651224.1 |
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| CDS TCA 72 bp | TCATTCAATAGTGAGACAGAATCAAGGGCCAGTGGGTaGGGAACAAGTCCTTCTAGAAGATATTTGTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: SFNSETESRASG*GTSPSRRYLCK Trigger: TTTGCACAAATATCTTCTAGAAGGACTTGTTCCTCACCCACTGGCCCTTGATTCTGTCTCACTATTGAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502680.1 ENST00000651224.1 |
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| CDS TCA 72 bp | TTAACATATGACCTGATGGAGTATGTTTGGAATGTGTaGTCCTCTTCCACTGAAGAGTGCATTGTAGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LTYDLMEYVWNV*SSSTEECIVGS Trigger: AGACCCTACAATGCACTCTTCAGTGGAAGAGGATCACACATTCCAAACATACTCCATCAGGTCATATGTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511443.1 |
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| CDS CCA 72 bp | TCATTGTCTAGTGTTTTATGGCACCTCTTTCCACTATaGGGAGCTTTTTATCCATGTCACACATCTTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: SLSSVLWHLFPL*GAFYPCHTSSN Trigger: ATTTGAAGATGTGTGACATGGATAAAAAGCTCCCCATAGTGGAAAGAGGTGCCATAAAACACTAGACAATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000651224.1 |
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