Pregenerated sensors for LINC02147 (Homo sapiens)
Ensembl gene IDs: ENSG00000249797Ensembl transcript IDs: ENST00000509367.2, ENST00000509669.1, ENST00000657852.1, ENST00000661774.1, ENST00000666478.1, ENST00000667067.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGCCAGGAAGAGAGGCCACAGCCGAAACCAACCCTGATAGCACCTTaGTCTTGGACTTCCAGCCTCCAGAAAGTTCCACGTGGCTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SQEERPQPKPTLIAP*SWTSSLQKVPRGLG Trigger: TCCTAAGCCACGTGGAACTTTCTGGAGGCTGGAAGTCCAAGATCAAGGTGCTATCAGGGTTGGTTTCGGCTGTGGCCTCTCTTCCTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000509367.2 ENST00000657852.1 ENST00000661774.1 ENST00000666478.1 |
||
| CDS GCA 90 bp | CACCGTTCTCCTGGAGTCACAGTTCACATCAACATATGGAGCTGTTaGTTCACACAAAGAGGCCACGTGAGGACACTGCGAGAAGATAGC | + |
|
Preference number: 5 (lower is better) Translates to: HRSPGVTVHINIWSC*FTQRGHVRTLREDS Trigger: GCTATCTTCTCGCAGTGTCCTCACGTGGCCTCTTTGTGTGAAGCAACAGCTCCATATGTTGATGTGAACTGTGACTCCAGGAGAACGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661774.1 |
||
| CDS CCA 90 bp | ACACTTTTCCACCGTTCTCCTGGAGTCACAGTTCACATCAACATATaGAGCTGTTGCTTCACACAAAGAGGCCACGTGAGGACACTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: TLFHRSPGVTVHINI*SCCFTQRGHVRTLR Trigger: TCGCAGTGTCCTCACGTGGCCTCTTTGTGTGAAGCAACAGCTCCATATGTTGATGTGAACTGTGACTCCAGGAGAACGGTGGAAAAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661774.1 |
||
| CDS TCA 90 bp | TGTGTCATTAGACGTTTGCCAAAACCTTCACACAAAGAGGCCACGTaGGGACACTGCGAGAAGATAGCTGTCTACAAGCCAGGAAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CVIRRLPKPSHKEAT*GHCEKIAVYKPGRE Trigger: CTCTCTTCCTGGCTTGTAGACAGCTATCTTCTCGCAGTGTCCTCACGTGGCCTCTTTGTGTGAAGGTTTTGGCAAACGTCTAATGACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509367.2 |
||
| CDS CCA 90 bp | TTGTATTTGAGGGACTTTTTCAGAGTGTTTCCCTCTCTTCTGATCTaGACCAGAATCTTTCGTTTTTGGTGGGTTCTGAACATCCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LYLRDFFRVFPSLLI*TRIFRFWWVLNILE Trigger: TTCCAGGATGTTCAGAACCCACCAAAAACGAAAGATTCTGGTCCAGATCAGAAGAGAGGGAAACACTCTGAAAAAGTCCCTCAAATACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000509669.1 ENST00000657852.1 ENST00000666478.1 ENST00000667067.1 |
||
| CDS CAA 90 bp | AAGCCAGGAAGAGAGGCCACAGCCGAAACCAACCCTGATAGCACCTaGATCTTGGACTTCCAGCCTCCAGAAAGTTCCACGTGGCTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: KPGREATAETNPDST*ILDFQPPESSTWLR Trigger: CCTAAGCCACGTGGAACTTTCTGGAGGCTGGAAGTCCAAGATCAAGGTGCTATCAGGGTTGGTTTCGGCTGTGGCCTCTCTTCCTGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000509367.2 ENST00000657852.1 ENST00000661774.1 ENST00000666478.1 |
||
| CDS TCA 72 bp | GAGAGGCCACAGCCGAAACCAACCCTGATAGCACCTTaGTCTTGGACTTCCAGCCTCCAGAAAGTTCCACGT | + |
|
Preference number: 6 (lower is better) Translates to: ERPQPKPTLIAP*SWTSSLQKVPR Trigger: ACGTGGAACTTTCTGGAGGCTGGAAGTCCAAGATCAAGGTGCTATCAGGGTTGGTTTCGGCTGTGGCCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000509367.2 ENST00000657852.1 ENST00000661774.1 ENST00000666478.1 |
||
| CDS CAA 72 bp | AGAGAGGCCACAGCCGAAACCAACCCTGATAGCACCTaGATCTTGGACTTCCAGCCTCCAGAAAGTTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: REATAETNPDST*ILDFQPPESST Trigger: CGTGGAACTTTCTGGAGGCTGGAAGTCCAAGATCAAGGTGCTATCAGGGTTGGTTTCGGCTGTGGCCTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000509367.2 ENST00000657852.1 ENST00000661774.1 ENST00000666478.1 |
||
| CDS GCA 72 bp | CCTGGAGTCACAGTTCACATCAACATATGGAGCTGTTaGTTCACACAAAGAGGCCACGTGAGGACACTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: PGVTVHINIWSC*FTQRGHVRTLR Trigger: TCGCAGTGTCCTCACGTGGCCTCTTTGTGTGAAGCAACAGCTCCATATGTTGATGTGAACTGTGACTCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661774.1 |
||
| CDS CCA 72 bp | CACCGTTCTCCTGGAGTCACAGTTCACATCAACATATaGAGCTGTTGCTTCACACAAAGAGGCCACGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HRSPGVTVHINI*SCCFTQRGHVR Trigger: CCTCACGTGGCCTCTTTGTGTGAAGCAACAGCTCCATATGTTGATGTGAACTGTGACTCCAGGAGAACGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661774.1 |
||
| CDS CAA 72 bp | TCCTGGAGTCACAGTTCACATCAACATATGGAGCTGTaGCTTCACACAAAGAGGCCACGTGAGGACACTGCG | + |
|
Preference number: 6 (lower is better) Translates to: SWSHSSHQHMEL*LHTKRPREDTA Trigger: CGCAGTGTCCTCACGTGGCCTCTTTGTGTGAAGCAACAGCTCCATATGTTGATGTGAACTGTGACTCCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661774.1 |
||
| CDS CAA 72 bp | AGAGAGGCCACAGCCGAAACCAACCCTGATAGCACCTaGATCTTGGACTTCCAGCCTCCAGAACATTTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: REATAETNPDST*ILDFQPPEHLV Trigger: AACTAAATGTTCTGGAGGCTGGAAGTCCAAGATCAAGGTGCTATCAGGGTTGGTTTCGGCTGTGGCCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667067.1 |
||
| CDS TCA 72 bp | ATCTGTTCATTTTTAACTTCACACAAAGAGGCCACGTaGGGACACTGCGAGAAGATAGCTGTCTACAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ICSFLTSHKEAT*GHCEKIAVYKP Trigger: TGGCTTGTAGACAGCTATCTTCTCGCAGTGTCCTCACGTGGCCTCTTTGTGTGAAGTTAAAAATGAACAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000509669.1 ENST00000666478.1 |
||
| CDS CCA 72 bp | AGGGACTTTTTCAGAGTGTTTCCCTCTCTTCTGATCTaGACCAGAATCTTTCGTTTTTGGTGGGTTCTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: RDFFRVFPSLLI*TRIFRFWWVLN Trigger: GTTCAGAACCCACCAAAAACGAAAGATTCTGGTCCAGATCAGAAGAGAGGGAAACACTCTGAAAAAGTCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000509669.1 ENST00000657852.1 ENST00000666478.1 ENST00000667067.1 |
||
| CDS CAA 90 bp | TTATTGTGGTCAAGCACATCATTTAAACTCTGTTTAATTTTGTATTaGAGGGACTTTTTCAGAGTGTTTCCCTCTCTTCTGATCTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: LLWSSTSFKLCLILY*RDFFRVFPSLLIWT Trigger: GGTCCAGATCAGAAGAGAGGGAAACACTCTGAAAAAGTCCCTCAAATACAAAATTAAACAGAGTTTAAATGATGTGCTTGACCACAATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000509669.1 ENST00000657852.1 ENST00000666478.1 ENST00000667067.1 |
||