Pregenerated sensors for LINC02146 (Homo sapiens)
Ensembl gene IDs: ENSG00000249490Ensembl transcript IDs: ENST00000504244.1, ENST00000657947.1, ENST00000659986.1, ENST00000664531.1, ENST00000668626.1
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TATACTGAAGCAGGAAATTCCCCTGACCCCTTGGTGGGTGGGAACTaGAGTGCAGGCACTGGAGCTAGCCAGCTGCTTCAGCATTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: YTEAGNSPDPLVGGN*SAGTGASQLLQHWQ Trigger: CTGCCAATGCTGAAGCAGCTGGCTAGCTCCAGTGCCTGCACTGCAGTTCCCACCCACCAAGGGGTCAGGGGAATTTCCTGCTTCAGTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659986.1 |
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| CDS CCA 90 bp | AGTAAGCAAGAGGAAAGATCATTGCAATGTCACCATCCATATCACTaGAACCTGTGGGCGCTCAACCCTTCCCGGGAAGGGGCACGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SKQEERSLQCHHPYH*NLWALNPSREGARR Trigger: CCTGCGTGCCCCTTCCCGGGAAGGGTTGAGCGCCCACAGGTTCCAGTGATATGGATGGTGACATTGCAATGATCTTTCCTCTTGCTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664531.1 |
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| CDS CCA 90 bp | TGTTCCTTCACATGTTCAGATGTGTCCGGGGTTTCTTCCTTCCGGTaGTTTCATGGTCTCCCCGACTTGACTTCAGGAGTGAAGCCGCAG | + |
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Preference number: 5 (lower is better) Translates to: CSFTCSDVSGVSSFR*FHGLPDLTSGVKPQ Trigger: CTGCGGCTTCACTCCTGAAGTCAAGTCGGGGAGACCATGAAACCACCGGAAGGAAGAAACCCCGGACACATCTGAACATGTGAAGGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000504244.1 ENST00000657947.1 ENST00000659986.1 ENST00000664531.1 |
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| CDS GCA 90 bp | GGATTGCAGGTGGGTTCAAAAAGATGGAAAAGACAGGGAAATGGATaGTCTTTGGGAGCTGCTAGAGGAAATGGCAGCCAGGCCAACATG | + |
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Preference number: 5 (lower is better) Translates to: GLQVGSKRWKRQGNG*SLGAARGNGSQANM Trigger: CATGTTGGCCTGGCTGCCATTTCCTCTAGCAGCTCCCAAAGAGCATCCATTTCCCTGTCTTTTCCATCTTTTTGAACCCACCTGCAATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668626.1 |
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| CDS GCA 90 bp | GCTGAGCACACTGGGACTTCTGACCTACCAAACTTGATGACTTTATaGAGTGCTGACTGTGCAAGGGGAGACTCAAATGTCAATAGATGG | + |
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Preference number: 5 (lower is better) Translates to: AEHTGTSDLPNLMTL*SADCARGDSNVNRW Trigger: CCATCTATTGACATTTGAGTCTCCCCTTGCACAGTCAGCACTGCATAAAGTCATCAAGTTTGGTAGGTCAGAAGTCCCAGTGTGCTCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668626.1 |
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| CDS TCA 90 bp | AGATCATTGCAATGTCACCATCCATATCACCTGGTGGAAGGTAATTaGATCATACGGGCGGCTTTTTCCTGTGCTGTTCTCGTGATAGTG | + |
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Preference number: 5 (lower is better) Translates to: RSLQCHHPYHLVEGN*IIRAAFSCAVLVIV Trigger: CACTATCACGAGAACAGCACAGGAAAAAGCCGCCCGTATGATTCAATTACCTTCCACCAGGTGATATGGATGGTGACATTGCAATGATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657947.1 |
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| CDS TCA 90 bp | CACCTCAGTCTTAGAACCACAAATAAATTCAAGTGGACACAAACTTaGATAGGCTTGGAAGCACATTCCTCCTCAGGGCCTCCAGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: HLSLRTTNKFKWTQT*IGLEAHSSSGPPER Trigger: CCTTTCTGGAGGCCCTGAGGAGGAATGTGCTTCCAAGCCTATTCAAGTTTGTGTCCACTTGAATTTATTTGTGGTTCTAAGACTGAGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668626.1 |
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| CDS CCA 90 bp | ATAGGTTTAATTAGTGATAATGTGTCTGGAATTGGTTCCTTCCAGTaGGTTCTCGGTCTCGCTGACTTCAAGAATGAAGCCGCAGACCCT | + |
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Preference number: 5 (lower is better) Translates to: IGLISDNVSGIGSFQ*VLGLADFKNEAADP Trigger: AGGGTCTGCGGCTTCATTCTTGAAGTCAGCGAGACCGAGAACCCACTGGAAGGAACCAATTCCAGACACATTATCACTAATTAAACCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000504244.1 ENST00000657947.1 ENST00000659986.1 ENST00000664531.1 |
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| CDS CCA 90 bp | AGCAAGAGGAAAGATCATTGCAATGTCACCATCCATATCACCTGGTaGAAGGTAATTGAATCATACGGGCGGCTTTTTCCTGTGCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: SKRKDHCNVTIHITW*KVIESYGRLFPVLF Trigger: GAACAGCACAGGAAAAAGCCGCCCGTATGATTCAATTACCTTCCACCAGGTGATATGGATGGTGACATTGCAATGATCTTTCCTCTTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657947.1 |
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| CDS CCA 90 bp | GTAAGCAAGAGGAAAGATCATTGCAATGTCACCATCCATATCACCTaGTGGAAGGTAATTGAATCATACGGGCGGCTTTTTCCTGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: VSKRKDHCNVTIHIT*WKVIESYGRLFPVL Trigger: CAGCACAGGAAAAAGCCGCCCGTATGATTCAATTACCTTCCACCAGGTGATATGGATGGTGACATTGCAATGATCTTTCCTCTTGCTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657947.1 |
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| CDS CCA 90 bp | AGAAGGCAGATTCTCATAATGGGTTTCCAGTACAGAATTGTCCTCTaGCTATTTATGGTGATAAGTGAAGGAGTGAGAACTCTTAGCGTA | + |
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Preference number: 5 (lower is better) Translates to: RRQILIMGFQYRIVL*LFMVISEGVRTLSV Trigger: TACGCTAAGAGTTCTCACTCCTTCACTTATCACCATAAATAGCCAGAGGACAATTCTGTACTGGAAACCCATTATGAGAATCTGCCTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659986.1 |
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| CDS CCA 72 bp | AGTGCAGGCACTGGAGCTAGCCAGCTGCTTCAGCATTaGCAGGGGCAAACTCCACTCACTGGAACCTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: SAGTGASQLLQH*QGQTPLTGTCG Trigger: CCCACAGGTTCCAGTGAGTGGAGTTTGCCCCTGCCAATGCTGAAGCAGCTGGCTAGCTCCAGTGCCTGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659986.1 |
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| CDS CCA 72 bp | TCATTGCAATGTCACCATCCATATCACTGGAACCTGTaGGCGCTCAACCCTTCCCGGGAAGGGGCACGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SLQCHHPYHWNL*ALNPSREGARR Trigger: CCTGCGTGCCCCTTCCCGGGAAGGGTTGAGCGCCCACAGGTTCCAGTGATATGGATGGTGACATTGCAATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664531.1 |
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| CDS CCA 72 bp | AGATGTGTCCGGGGTTTCTTCCTTCCGGTGGTTTCATaGTCTCCCCGACTTGACTTCAGGAGTGAAGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: RCVRGFFLPVVS*SPRLDFRSEAA Trigger: TGCGGCTTCACTCCTGAAGTCAAGTCGGGGAGACCATGAAACCACCGGAAGGAAGAAACCCCGGACACATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000504244.1 ENST00000657947.1 ENST00000659986.1 ENST00000664531.1 |
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| CDS CAA 72 bp | GTTTCTTCCTTCCGGTGGTTTCATGGTCTCCCCGACTaGACTTCAGGAGTGAAGCCGCAGACCTCTGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: VSSFRWFHGLPD*TSGVKPQTSAV Trigger: CACTGCAGAGGTCTGCGGCTTCACTCCTGAAGTCAAGTCGGGGAGACCATGAAACCACCGGAAGGAAGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000504244.1 ENST00000657947.1 ENST00000659986.1 ENST00000664531.1 |
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| CDS CCA 72 bp | ACATGTTCAGATGTGTCCGGGGTTTCTTCCTTCCGGTaGTTTCATGGTCTCCCCGACTTGACTTCAGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: TCSDVSGVSSFR*FHGLPDLTSGV Trigger: CACTCCTGAAGTCAAGTCGGGGAGACCATGAAACCACCGGAAGGAAGAAACCCCGGACACATCTGAACATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000504244.1 ENST00000657947.1 ENST00000659986.1 ENST00000664531.1 |
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| CDS CCA 72 bp | TGTGATGTGGGCAGGACTCCTCCTGACACTCACTGTTaGCTTTCAAAGATGGAGGAAGGAGAGCATGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: CDVGRTPPDTHC*LSKMEEGEHEP Trigger: TGGCTCATGCTCTCCTTCCTCCATCTTTGAAAGCCAACAGTGAGTGTCAGGAGGAGTCCTGCCCACATCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668626.1 |
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| CDS CAA 72 bp | CCAGCTGAGCACACTGGGACTTCTGACCTACCAAACTaGATGACTTTATGCAGTGCTGACTGTGCAAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: PAEHTGTSDLPN*MTLCSADCARG Trigger: TCCCCTTGCACAGTCAGCACTGCATAAAGTCATCAAGTTTGGTAGGTCAGAAGTCCCAGTGTGCTCAGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668626.1 |
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| CDS TCA 72 bp | CAATGTCACCATCCATATCACCTGGTGGAAGGTAATTaGATCATACGGGCGGCTTTTTCCTGTGCTGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: QCHHPYHLVEGN*IIRAAFSCAVL Trigger: GAGAACAGCACAGGAAAAAGCCGCCCGTATGATTCAATTACCTTCCACCAGGTGATATGGATGGTGACATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657947.1 |
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| CDS GCA 72 bp | ACTGGGACTTCTGACCTACCAAACTTGATGACTTTATaGAGTGCTGACTGTGCAAGGGGAGACTCAAATGTC | + |
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Preference number: 6 (lower is better) Translates to: TGTSDLPNLMTL*SADCARGDSNV Trigger: GACATTTGAGTCTCCCCTTGCACAGTCAGCACTGCATAAAGTCATCAAGTTTGGTAGGTCAGAAGTCCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668626.1 |
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| CDS CCA 72 bp | ATTAGTGATAATGTGTCTGGAATTGGTTCCTTCCAGTaGGTTCTCGGTCTCGCTGACTTCAAGAATGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: ISDNVSGIGSFQ*VLGLADFKNEA Trigger: GGCTTCATTCTTGAAGTCAGCGAGACCGAGAACCCACTGGAAGGAACCAATTCCAGACACATTATCACTAAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000504244.1 ENST00000657947.1 ENST00000659986.1 ENST00000664531.1 |
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| CDS CAA 72 bp | TTTCAAAGATGGAGGAAGGAGAGCATGAGCCAAGGATaGCAGGTGGGTTCAAAAAGATGGAAAAGACAGGGA | + |
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Preference number: 6 (lower is better) Translates to: FQRWRKESMSQG*QVGSKRWKRQG Trigger: TCCCTGTCTTTTCCATCTTTTTGAACCCACCTGCAATCCTTGGCTCATGCTCTCCTTCCTCCATCTTTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668626.1 |
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| CDS TCA 72 bp | CTTAGAACCACAAATAAATTCAAGTGGACACAAACTTaGATAGGCTTGGAAGCACATTCCTCCTCAGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LRTTNKFKWTQT*IGLEAHSSSGP Trigger: AGGCCCTGAGGAGGAATGTGCTTCCAAGCCTATTCAAGTTTGTGTCCACTTGAATTTATTTGTGGTTCTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668626.1 |
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| CDS CCA 72 bp | ATTCTCATAATGGGTTTCCAGTACAGAATTGTCCTCTaGCTATTTATGGTGATAAGTGAAGGAGTGAGAACT | + |
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Preference number: 6 (lower is better) Translates to: ILIMGFQYRIVL*LFMVISEGVRT Trigger: AGTTCTCACTCCTTCACTTATCACCATAAATAGCCAGAGGACAATTCTGTACTGGAAACCCATTATGAGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659986.1 |
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