RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02141 (Homo sapiens)

Ensembl gene IDs: ENSG00000261807

Ensembl transcript IDs: ENST00000568279.2

Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CAGGATAGTATTCTCCTGATTACTGTTTGGCTCCTTCATCTTTCTTaGCAGCTGCATCCATGGTCCTCTTCTATCCCACTGGATGGGATC +
Preference number: 5 (lower is better)
Translates to: QDSILLITVWLLHLS*QLHPWSSSIPLDGI
Trigger: GATCCCATCCAGTGGGATAGAAGAGGACCATGGATGCAGCTGGCAAGAAAGATGAAGGAGCCAAACAGTAATCAGGAGAATACTATCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS GCA 90 bp GCCAGAGGGTCACAGCATTCCACATTTCAGTTCACTGTAACCTTTTaGCCACAGGACTTGTGCAGAATCTCTTACAGATGGCAGTTCTAT +
Preference number: 5 (lower is better)
Translates to: ARGSQHSTFQFTVTF*PQDLCRISYRWQFY
Trigger: ATAGAACTGCCATCTGTAAGAGATTCTGCACAAGTCCTGTGGGCAAAAGGTTACAGTGAACTGAAATGTGGAATGCTGTGACCCTCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS GCA 90 bp GCTAGTGTTCCTATCTCTGATTCCTCTTCAATGCATGATTCACGCTaGTGCCAGAGGGTCACAGCATTCCACATTTCAGTTCACTGTAAC +
Preference number: 5 (lower is better)
Translates to: ASVPISDSSSMHDSR*CQRVTAFHISVHCN
Trigger: GTTACAGTGAACTGAAATGTGGAATGCTGTGACCCTCTGGCAGCAGCGTGAATCATGCATTGAAGAGGAATCAGAGATAGGAACACTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS GCA 90 bp AGTGTTCCTATCTCTGATTCCTCTTCAATGCATGATTCACGCTGCTaGCAGAGGGTCACAGCATTCCACATTTCAGTTCACTGTAACCTT +
Preference number: 5 (lower is better)
Translates to: SVPISDSSSMHDSRC*QRVTAFHISVHCNL
Trigger: AAGGTTACAGTGAACTGAAATGTGGAATGCTGTGACCCTCTGGCAGCAGCGTGAATCATGCATTGAAGAGGAATCAGAGATAGGAACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS CCA 90 bp AATAGCATCTTTAGCACCCAGGATAGTATTCTCCTGATTACTGTTTaGCTCCTTCATCTTTCTTGCCAGCTGCATCCATGGTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: NSIFSTQDSILLITV*LLHLSCQLHPWSSS
Trigger: AGAAGAGGACCATGGATGCAGCTGGCAAGAAAGATGAAGGAGCCAAACAGTAATCAGGAGAATACTATCCTGGGTGCTAAAGATGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS TCA 90 bp ACTGTGAGGTTCTTATATGAGGCTGGTGACACAGCCCAGTCAATGTaGGGAGTAAAACAGAAATACTGTGGAGAGAAGTCAAAGTGGAAA +
Preference number: 5 (lower is better)
Translates to: TVRFLYEAGDTAQSM*GVKQKYCGEKSKWK
Trigger: TTTCCACTTTGACTTCTCTCCACAGTATTTCTGTTTTACTCCTCACATTGACTGGGCTGTGTCACCAGCCTCATATAAGAACCTCACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS GCA 90 bp CATTCCACATTTCAGTTCACTGTAACCTTTTGCCCACAGGACTTGTaGAGAATCTCTTACAGATGGCAGTTCTATTCAGGTCCAATCAAA +
Preference number: 5 (lower is better)
Translates to: HSTFQFTVTFCPQDL*RISYRWQFYSGPIK
Trigger: TTTGATTGGACCTGAATAGAACTGCCATCTGTAAGAGATTCTGCACAAGTCCTGTGGGCAAAAGGTTACAGTGAACTGAAATGTGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS TCA 90 bp GCCTCAAATGCTCGTTTTCTTTATCTCCACACCAACTTCTTTTCTTaGTCTCTGAAGCCATTTAATAGCATCTTTAGCACCCAGGATAGT +
Preference number: 5 (lower is better)
Translates to: ASNARFLYLHTNFFS*SLKPFNSIFSTQDS
Trigger: ACTATCCTGGGTGCTAAAGATGCTATTAAATGGCTTCAGAGATCAAGAAAAGAAGTTGGTGTGGAGATAAAGAAAACGAGCATTTGAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS GCA 90 bp TGGCATTCTTCTTTTCCTAGTGTTCAAACTAGACCAAACACTCATTaGACACTTCCTTGCAACTACTTGTTAAAGCTTGTCTTTCAGACA +
Preference number: 5 (lower is better)
Translates to: WHSSFPSVQTRPNTH*TLPCNYLLKLVFQT
Trigger: TGTCTGAAAGACAAGCTTTAACAAGTAGTTGCAAGGAAGTGTGCAATGAGTGTTTGGTCTAGTTTGAACACTAGGAAAAGAAGAATGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS CCA 90 bp TTAAAGAGCACTTTCTCAAGGTGGACTTTAATGGTACCTAGACTGTaGCATTCTTCTTTTCCTAGTGTTCAAACTAGACCAAACACTCAT +
Preference number: 5 (lower is better)
Translates to: LKSTFSRWTLMVPRL*HSSFPSVQTRPNTH
Trigger: ATGAGTGTTTGGTCTAGTTTGAACACTAGGAAAAGAAGAATGCCACAGTCTAGGTACCATTAAAGTCCACCTTGAGAAAGTGCTCTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS GCA 90 bp CATAAATTGCTTAAACAGAACAAAAGGACCACTAGTTGCCATTACTaGAGAAAGGATTTAAGAGTGAGAGAGGAAAATGAAGTGGCAGAT +
Preference number: 5 (lower is better)
Translates to: HKLLKQNKRTTSCHY*RKDLRVREENEVAD
Trigger: ATCTGCCACTTCATTTTCCTCTCTCACTCTTAAATCCTTTCTGCAGTAATGGCAACTAGTGGTCCTTTTGTTCTGTTTAAGCAATTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS CCA 90 bp TTTTCTAATCACTCAAACTTCAAATTAAAGAGCACTTTCTCAAGGTaGACTTTAATGGTACCTAGACTGTGGCATTCTTCTTTTCCTAGT +
Preference number: 5 (lower is better)
Translates to: FSNHSNFKLKSTFSR*TLMVPRLWHSSFPS
Trigger: ACTAGGAAAAGAAGAATGCCACAGTCTAGGTACCATTAAAGTCCACCTTGAGAAAGTGCTCTTTAATTTGAAGTTTGAGTGATTAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS CAA 90 bp TGCCAGAGGGTCACAGCATTCCACATTTCAGTTCACTGTAACCTTTaGCCCACAGGACTTGTGCAGAATCTCTTACAGATGGCAGTTCTA +
Preference number: 6 (lower is better)
Translates to: CQRVTAFHISVHCNL*PTGLVQNLLQMAVL
Trigger: TAGAACTGCCATCTGTAAGAGATTCTGCACAAGTCCTGTGGGCAAAAGGTTACAGTGAACTGAAATGTGGAATGCTGTGACCCTCTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS CAA 90 bp ACACCCGGGCTTCAGTCTTTAAGAAATACTAGGAGACTGATAATTTaGGGGGCAGTGAAAATACTGTCCCAAGCTGTAGGAGCAGCACCA +
Preference number: 6 (lower is better)
Translates to: TPGLQSLRNTRRLII*GAVKILSQAVGAAP
Trigger: TGGTGCTGCTCCTACAGCTTGGGACAGTATTTTCACTGCCCCCAAAATTATCAGTCTCCTAGTATTTCTTAAAGACTGAAGCCCGGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS CCA 72 bp TTTTGCCCACAGGACTTGTGCAGAATCTCTTACAGATaGCAGTTCTATTCAGGTCCAATCAAACGTCTCCCG +
Preference number: 6 (lower is better)
Translates to: FCPQDLCRISYR*QFYSGPIKRLP
Trigger: CGGGAGACGTTTGATTGGACCTGAATAGAACTGCCATCTGTAAGAGATTCTGCACAAGTCCTGTGGGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS CCA 72 bp TTTAGCACCCAGGATAGTATTCTCCTGATTACTGTTTaGCTCCTTCATCTTTCTTGCCAGCTGCATCCATGG +
Preference number: 6 (lower is better)
Translates to: FSTQDSILLITV*LLHLSCQLHPW
Trigger: CCATGGATGCAGCTGGCAAGAAAGATGAAGGAGCCAAACAGTAATCAGGAGAATACTATCCTGGGTGCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS CAA 90 bp CAGCATTCCACATTTCAGTTCACTGTAACCTTTTGCCCACAGGACTaGTGCAGAATCTCTTACAGATGGCAGTTCTATTCAGGTCCAATC +
Preference number: 6 (lower is better)
Translates to: QHSTFQFTVTFCPQD*CRISYRWQFYSGPI
Trigger: GATTGGACCTGAATAGAACTGCCATCTGTAAGAGATTCTGCACAAGTCCTGTGGGCAAAAGGTTACAGTGAACTGAAATGTGGAATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS GCA 72 bp TCACAGCATTCCACATTTCAGTTCACTGTAACCTTTTaGCCACAGGACTTGTGCAGAATCTCTTACAGATGG +
Preference number: 6 (lower is better)
Translates to: SQHSTFQFTVTF*PQDLCRISYRW
Trigger: CCATCTGTAAGAGATTCTGCACAAGTCCTGTGGGCAAAAGGTTACAGTGAACTGAAATGTGGAATGCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS GCA 72 bp ATCACCTCCTTAGCTCTCAATATCAACCAGTCAGGTTaGTCGGGGACTGAATCTATTTCATTGCCTTGTCTT +
Preference number: 6 (lower is better)
Translates to: ITSLALNINQSG*SGTESISLPCL
Trigger: AAGACAAGGCAATGAAATAGATTCAGTCCCCGAGCAACCTGACTGGTTGATATTGAGAGCTAAGGAGGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS CCA 72 bp AAGCACGCTACTTTTACCAGATCCAATTGGAGCAAATaGCTCAAGCAGGACCATCAAACATACTGCACTCTT +
Preference number: 6 (lower is better)
Translates to: KHATFTRSNWSK*LKQDHQTYCTL
Trigger: AAGAGTGCAGTATGTTTGATGGTCCTGCTTGAGCCATTTGCTCCAATTGGATCTGGTAAAAGTAGCGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS CAA 72 bp GTCACAGCATTCCACATTTCAGTTCACTGTAACCTTTaGCCCACAGGACTTGTGCAGAATCTCTTACAGATG +
Preference number: 6 (lower is better)
Translates to: VTAFHISVHCNL*PTGLVQNLLQM
Trigger: CATCTGTAAGAGATTCTGCACAAGTCCTGTGGGCAAAAGGTTACAGTGAACTGAAATGTGGAATGCTGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS TCA 72 bp TTCTTATATGAGGCTGGTGACACAGCCCAGTCAATGTaGGGAGTAAAACAGAAATACTGTGGAGAGAAGTCA +
Preference number: 6 (lower is better)
Translates to: FLYEAGDTAQSM*GVKQKYCGEKS
Trigger: TGACTTCTCTCCACAGTATTTCTGTTTTACTCCTCACATTGACTGGGCTGTGTCACCAGCCTCATATAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS CAA 72 bp ATATGTCTCCAAGCACGCTACTTTTACCAGATCCAATaGGAGCAAATGGCTCAAGCAGGACCATCAAACATA +
Preference number: 6 (lower is better)
Translates to: ICLQARYFYQIQ*EQMAQAGPSNI
Trigger: TATGTTTGATGGTCCTGCTTGAGCCATTTGCTCCAATTGGATCTGGTAAAAGTAGCGTGCTTGGAGACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS CAA 72 bp ACATTTCAGTTCACTGTAACCTTTTGCCCACAGGACTaGTGCAGAATCTCTTACAGATGGCAGTTCTATTCA +
Preference number: 6 (lower is better)
Translates to: TFQFTVTFCPQD*CRISYRWQFYS
Trigger: TGAATAGAACTGCCATCTGTAAGAGATTCTGCACAAGTCCTGTGGGCAAAAGGTTACAGTGAACTGAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS CAA 90 bp AAAATGTTTATATGTCTCCAAGCACGCTACTTTTACCAGATCCAATaGGAGCAAATGGCTCAAGCAGGACCATCAAACATACTGCACTCT +
Preference number: 6 (lower is better)
Translates to: KMFICLQARYFYQIQ*EQMAQAGPSNILHS
Trigger: AGAGTGCAGTATGTTTGATGGTCCTGCTTGAGCCATTTGCTCCAATTGGATCTGGTAAAAGTAGCGTGCTTGGAGACATATAAACATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS CAA 72 bp TGGCCTACTACACTCGAACCACCATCCTCAGTGTATTaGTATGCACATCTATTTAGATGTAATGCTGATAAG +
Preference number: 6 (lower is better)
Translates to: WPTTLEPPSSVY*YAHLFRCNADK
Trigger: CTTATCAGCATTACATCTAAATAGATGTGCATACAAATACACTGAGGATGGTGGTTCGAGTGTAGTAGGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS CAA 90 bp AAGTTCATATGGCCTACTACACTCGAACCACCATCCTCAGTGTATTaGTATGCACATCTATTTAGATGTAATGCTGATAAGCCATTTACC +
Preference number: 6 (lower is better)
Translates to: KFIWPTTLEPPSSVY*YAHLFRCNADKPFT
Trigger: GGTAAATGGCTTATCAGCATTACATCTAAATAGATGTGCATACAAATACACTGAGGATGGTGGTTCGAGTGTAGTAGGCCATATGAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS TCA 72 bp GCTTGTGTTAACCTTGGTGAATGCATATCTTTTTCCTaGTTTAATTGCAATTGCCTGGAGCTTCAATCTGCA +
Preference number: 6 (lower is better)
Translates to: ACVNLGECISFS*FNCNCLELQSA
Trigger: TGCAGATTGAAGCTCCAGGCAATTGCAATTAAATCAGGAAAAAGATATGCATTCACCAAGGTTAACACAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS GCA 72 bp ATTATTGGGATGTTGGGGACAAGCTGTTCCATAAATTaGTTAAACAGAACAAAAGGACCACTAGTTGCCATT +
Preference number: 6 (lower is better)
Translates to: IIGMLGTSCSIN*LNRTKGPLVAI
Trigger: AATGGCAACTAGTGGTCCTTTTGTTCTGTTTAAGCAATTTATGGAACAGCTTGTCCCCAACATCCCAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS CCA 72 bp CACTCAAACTTCAAATTAAAGAGCACTTTCTCAAGGTaGACTTTAATGGTACCTAGACTGTGGCATTCTTCT +
Preference number: 6 (lower is better)
Translates to: HSNFKLKSTFSR*TLMVPRLWHSS
Trigger: AGAAGAATGCCACAGTCTAGGTACCATTAAAGTCCACCTTGAGAAAGTGCTCTTTAATTTGAAGTTTGAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS CAA 72 bp AATTATTGGGATGTTGGGGACAAGCTGTTCCATAAATaGCTTAAACAGAACAAAAGGACCACTAGTTGCCAT +
Preference number: 6 (lower is better)
Translates to: NYWDVGDKLFHK*LKQNKRTTSCH
Trigger: ATGGCAACTAGTGGTCCTTTTGTTCTGTTTAAGCAATTTATGGAACAGCTTGTCCCCAACATCCCAATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS CAA 72 bp CAGAGTATGAATCTTAATCTTGCTAACCAGGTGAACTaGCACGAGTCACTTAACTTCTCTGAGACTCATTTT +
Preference number: 6 (lower is better)
Translates to: QSMNLNLANQVN*HESLNFSETHF
Trigger: AAAATGAGTCTCAGAGAAGTTAAGTGACTCGTGCAAGTTCACCTGGTTAGCAAGATTAAGATTCATACTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS CAA 90 bp GTGTTTGTTTGTTTCATCCTGATTAAGCTGCAGCTTGTGTTAACCTaGGTGAATGCATATCTTTTTCCTGATTTAATTGCAATTGCCTGG +
Preference number: 6 (lower is better)
Translates to: VFVCFILIKLQLVLT*VNAYLFPDLIAIAW
Trigger: CCAGGCAATTGCAATTAAATCAGGAAAAAGATATGCATTCACCAAGGTTAACACAAGCTGCAGCTTAATCAGGATGAAACAAACAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS GCA 72 bp CTTAAACAGAACAAAAGGACCACTAGTTGCCATTACTaGAGAAAGGATTTAAGAGTGAGAGAGGAAAATGAA +
Preference number: 6 (lower is better)
Translates to: LKQNKRTTSCHY*RKDLRVREENE
Trigger: TTCATTTTCCTCTCTCACTCTTAAATCCTTTCTGCAGTAATGGCAACTAGTGGTCCTTTTGTTCTGTTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568279.2
CDS CAA 72 bp TGTTTCATCCTGATTAAGCTGCAGCTTGTGTTAACCTaGGTGAATGCATATCTTTTTCCTGATTTAATTGCA +
Preference number: 6 (lower is better)
Translates to: CFILIKLQLVLT*VNAYLFPDLIA
Trigger: TGCAATTAAATCAGGAAAAAGATATGCATTCACCAAGGTTAACACAAGCTGCAGCTTAATCAGGATGAAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568279.2