Pregenerated sensors for LINC02140 (Homo sapiens)
Ensembl gene IDs: ENSG00000261803Ensembl transcript IDs: ENST00000562614.1, ENST00000566649.1, ENST00000660155.1, ENST00000661222.1, ENST00000668085.1, ENST00000669832.1
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGTGATGATCATGCCCTGGCCCACCCTTATCTCAGAGCTCCGATCTaGCGCAACCAGTCCCCATGCCAGGCGGCCAGGCTGGGGTCGGTC | + |
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Preference number: 5 (lower is better) Translates to: GDDHALAHPYLRAPI*RNQSPCQAARLGSV Trigger: GACCGACCCCAGCCTGGCCGCCTGGCATGGGGACTGGTTGCGTCAGATCGGAGCTCTGAGATAAGGGTGGGCCAGGGCATGATCATCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 ENST00000669832.1 |
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| CDS TCA 90 bp | AGGCGGCGGGGACTATTAACGGTCACATGGAGGCCGCCGCATCTGTaGTGGCAGAGCGGGTCGGTGGGTCCCCACTGCTGTGTTTACTGC | + |
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Preference number: 5 (lower is better) Translates to: RRRGLLTVTWRPPHL*WQSGSVGPHCCVYC Trigger: GCAGTAAACACAGCAGTGGGGACCCACCGACCCGCTCTGCCATCACAGATGCGGCGGCCTCCATGTGACCGTTAATAGTCCCCGCCGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000566649.1 ENST00000661222.1 |
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| CDS TCA 90 bp | AGGATAGGAGTGGGGGTTAGGTGGAAGGGGCTCTGGTCCTGCAGCTaGACCTTGACAGAACAGCCCTGGGTTCCTGCCAAAGATTTCATT | + |
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Preference number: 5 (lower is better) Translates to: RIGVGVRWKGLWSCS*TLTEQPWVPAKDFI Trigger: AATGAAATCTTTGGCAGGAACCCAGGGCTGTTCTGTCAAGGTTCAGCTGCAGGACCAGAGCCCCTTCCACCTAACCCCCACTCCTATCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 |
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| CDS TCA 90 bp | GAGTGGGGGTTAGGTGGAAGGGGCTCTGGTCCTGCAGCTGAACCTTaGCAGAACAGCCCTGGGTTCCTGCCAAAGATTTCATTTGAAGTT | + |
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Preference number: 5 (lower is better) Translates to: EWGLGGRGSGPAAEP*QNSPGFLPKISFEV Trigger: AACTTCAAATGAAATCTTTGGCAGGAACCCAGGGCTGTTCTGTCAAGGTTCAGCTGCAGGACCAGAGCCCCTTCCACCTAACCCCCACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 |
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| CDS TCA 90 bp | GGTGGCCTCCACTCTGCCTCTCACAAGCGGTTTCCAAGGTGGCAATaGGGATGGCTGTTCACAAATCAGCAAAGTGCAGAGCTCTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: GGLHSASHKRFPRWQ*GWLFTNQQSAELFL Trigger: CAGAAAGAGCTCTGCACTTTGCTGATTTGTGAACAGCCATCCTCATTGCCACCTTGGAAACCGCTTGTGAGAGGCAGAGTGGAGGCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660155.1 |
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| CDS GCA 90 bp | GGGATGTCTGTCTGTCCGATTGCTGTGTTACTTCCCTCAAGTCTGTaGACTTCTCTGGGCCAAGTCTTCTCAGTTGGAAAATGGAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: GMSVCPIAVLLPSSL*TSLGQVFSVGKWSW Trigger: CCAACTCCATTTTCCAACTGAGAAGACTTGGCCCAGAGAAGTGCACAGACTTGAGGGAAGTAACACAGCAATCGGACAGACAGACATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 ENST00000669832.1 |
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| CDS TCA 90 bp | GAAGGGCCTAGAGCAAATAGGCTTAGTTTTCTGCCCAGTGGAGGCTaGAGTAGAGACAGATCTTTGGCCTCTTCTGGAAGTGCTGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: EGPRANRLSFLPSGG*SRDRSLASSGSAVE Trigger: TTCAACAGCACTTCCAGAAGAGGCCAAAGATCTGTCTCTACTTCAGCCTCCACTGGGCAGAAAACTAAGCCTATTTGCTCTAGGCCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 ENST00000669832.1 |
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| CDS GCA 90 bp | ATGGCTGTTCACAAATCAGCAAAGTGCAGAGCTCTTTCTGTGAGATaGTTAATTTTTGTGAGTTGTGGAACCCTATTTATTTTATGTGAC | + |
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Preference number: 5 (lower is better) Translates to: MAVHKSAKCRALSVR*LIFVSCGTLFILCD Trigger: GTCACATAAAATAAATAGGGTTCCACAACTCACAAAAATTAAGCATCTCACAGAAAGAGCTCTGCACTTTGCTGATTTGTGAACAGCCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660155.1 |
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| CDS TCA 72 bp | GGACTATTAACGGTCACATGGAGGCCGCCGCATCTGTaGTGGCAGAGCGGGTCGGTGGGTCCCCACTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: GLLTVTWRPPHL*WQSGSVGPHCC Trigger: ACAGCAGTGGGGACCCACCGACCCGCTCTGCCATCACAGATGCGGCGGCCTCCATGTGACCGTTAATAGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566649.1 ENST00000661222.1 |
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| CDS CCA 72 bp | CAAGTTGATTACACCACAAAGCAGGATGCTTTATCATaGGGGCCTCTCAGGAGGCGGCGGGAGGGGCGGTCA | + |
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Preference number: 6 (lower is better) Translates to: QVDYTTKQDALS*GPLRRRREGRS Trigger: TGACCGCCCCTCCCGCCGCCTCCTGAGAGGCCCCCATGATAAAGCATCCTGCTTTGTGGTGTAATCAACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661222.1 |
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| CDS TCA 72 bp | TTAGGTGGAAGGGGCTCTGGTCCTGCAGCTGAACCTTaGCAGAACAGCCCTGGGTTCCTGCCAAAGATTTCA | + |
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Preference number: 6 (lower is better) Translates to: LGGRGSGPAAEP*QNSPGFLPKIS Trigger: TGAAATCTTTGGCAGGAACCCAGGGCTGTTCTGTCAAGGTTCAGCTGCAGGACCAGAGCCCCTTCCACCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 |
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| CDS TCA 72 bp | CCAGAGAATGGGGCTAGGCAGAAGGTGGCACGGTCATaGGACATCCTGCCACGAAGTGTAGCTTGTCCATTT | + |
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Preference number: 6 (lower is better) Translates to: PENGARQKVARS*DILPRSVACPF Trigger: AAATGGACAAGCTACACTTCGTGGCAGGATGTCTCATGACCGTGCCACCTTCTGCCTAGCCCCATTCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 ENST00000669832.1 |
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| CDS CCA 72 bp | ATGTTTAAGAAGGGGACGGACCATTTAGATGACAAATaGGCTTCAGGGCGCTGTCAGAACTTCCAGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: MFKKGTDHLDDK*ASGRCQNFQAA Trigger: CGCCGCCTGGAAGTTCTGACAGCGCCCTGAAGCCCATTTGTCATCTAAATGGTCCGTCCCCTTCTTAAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000566649.1 ENST00000661222.1 ENST00000669832.1 |
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| CDS TCA 72 bp | CACTCTGCCTCTCACAAGCGGTTTCCAAGGTGGCAATaGGGATGGCTGTTCACAAATCAGCAAAGTGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: HSASHKRFPRWQ*GWLFTNQQSAE Trigger: CTCTGCACTTTGCTGATTTGTGAACAGCCATCCTCATTGCCACCTTGGAAACCGCTTGTGAGAGGCAGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660155.1 |
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| CDS TCA 72 bp | GGACAAGGTGCAGTGATTTTGCAGACTGTTCTCTGGTaGGAAACCACAGCAGATGTGCCTCAGGAAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: GQGAVILQTVLW*ETTADVPQEAS Trigger: TGATGCTTCCTGAGGCACATCTGCTGTGGTTTCTCACCAGAGAACAGTCTGCAAAATCACTGCACCTTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 ENST00000669832.1 |
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| CDS GCA 72 bp | GTCTGTCCGATTGCTGTGTTACTTCCCTCAAGTCTGTaGACTTCTCTGGGCCAAGTCTTCTCAGTTGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: VCPIAVLLPSSL*TSLGQVFSVGK Trigger: TTTTCCAACTGAGAAGACTTGGCCCAGAGAAGTGCACAGACTTGAGGGAAGTAACACAGCAATCGGACAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 ENST00000669832.1 |
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| CDS CCA 72 bp | GTCTCTATTTTCTCCCAGGACCGTAGCAGGTATATCTaGGGATGTCTGTCTGTCCGATTGCTGTGTTACTTC | + |
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Preference number: 6 (lower is better) Translates to: VSIFSQDRSRYI*GCLSVRLLCYF Trigger: GAAGTAACACAGCAATCGGACAGACAGACATCCCCAGATATACCTGCTACGGTCCTGGGAGAAAATAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 ENST00000669832.1 |
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| CDS CCA 72 bp | GATTGGGCTACAGAGAATGATGAGGATGATGGTATTTaGGGATGGGTCTCTATTTTCTCCCAGGACCGTAGC | + |
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Preference number: 6 (lower is better) Translates to: DWATENDEDDGI*GWVSIFSQDRS Trigger: GCTACGGTCCTGGGAGAAAATAGAGACCCATCCCCAAATACCATCATCCTCATCATTCTCTGTAGCCCAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 ENST00000669832.1 |
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| CDS CAA 90 bp | TACTTCCCTCAAGTCTGTGCACTTCTCTGGGCCAAGTCTTCTCAGTaGGAAAATGGAGTTGGACAAGGTGCAGTGATTTTGCAGACTGTT | + |
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Preference number: 6 (lower is better) Translates to: YFPQVCALLWAKSSQ*ENGVGQGAVILQTV Trigger: AACAGTCTGCAAAATCACTGCACCTTGTCCAACTCCATTTTCCAACTGAGAAGACTTGGCCCAGAGAAGTGCACAGACTTGAGGGAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 ENST00000669832.1 |
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| CDS TCA 72 bp | AGAGCAAATAGGCTTAGTTTTCTGCCCAGTGGAGGCTaGAGTAGAGACAGATCTTTGGCCTCTTCTGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: RANRLSFLPSGG*SRDRSLASSGS Trigger: ACTTCCAGAAGAGGCCAAAGATCTGTCTCTACTTCAGCCTCCACTGGGCAGAAAACTAAGCCTATTTGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 ENST00000669832.1 |
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| CDS TCA 72 bp | CGGCGCTCATTAGGAGGTAATGCATGTATGGCAAGTTaGTTACACCACAAAGCAGGATGCTTTATCATGGGG | + |
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Preference number: 6 (lower is better) Translates to: RRSLGGNACMAS*LHHKAGCFIMG Trigger: CCCCATGATAAAGCATCCTGCTTTGTGGTGTAATCAACTTGCCATACATGCATTACCTCCTAATGAGCGCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661222.1 |
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| CDS GCA 72 bp | CAGAGCGGGTCGGTGGGTCCCCACTGCTGTGTTTACTaGTCCTTAATGTGGTATTGTTTACTCACAATTAAA | + |
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Preference number: 6 (lower is better) Translates to: QSGSVGPHCCVY*SLMWYCLLTIK Trigger: TTTAATTGTGAGTAAACAATACCACATTAAGGAGCAGTAAACACAGCAGTGGGGACCCACCGACCCGCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566649.1 ENST00000661222.1 |
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| CDS CCA 72 bp | TGCACTTCTCTGGGCCAAGTCTTCTCAGTTGGAAAATaGAGTTGGACAAGGTGCAGTGATTTTGCAGACTGT | + |
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Preference number: 6 (lower is better) Translates to: CTSLGQVFSVGK*SWTRCSDFADC Trigger: ACAGTCTGCAAAATCACTGCACCTTGTCCAACTCCATTTTCCAACTGAGAAGACTTGGCCCAGAGAAGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 ENST00000669832.1 |
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| CDS CAA 72 bp | GTAGAGACAGATCTTTGGCCTCTTCTGGAAGTGCTGTaGAATACACAGCCCCCTTTGATACACAGATCACCT | + |
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Preference number: 6 (lower is better) Translates to: VETDLWPLLEVL*NTQPPLIHRSP Trigger: AGGTGATCTGTGTATCAAAGGGGGCTGTGTATTCAACAGCACTTCCAGAAGAGGCCAAAGATCTGTCTCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 ENST00000669832.1 |
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| CDS GCA 72 bp | CTGCAGCTGAACCTTGACAGAACAGCCCTGGGTTCCTaGCAAAGATTTCATTTGAAGTTAGAATTTCATGGC | + |
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Preference number: 6 (lower is better) Translates to: LQLNLDRTALGS*QRFHLKLEFHG Trigger: GCCATGAAATTCTAACTTCAAATGAAATCTTTGGCAGGAACCCAGGGCTGTTCTGTCAAGGTTCAGCTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 |
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| CDS CCA 72 bp | AGAGGCGACAACACAAATATGGTAATACCATTTAGGTaGCACTCTGTGACCCAATCTCTGTGGCAAAACCAG | + |
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Preference number: 6 (lower is better) Translates to: RGDNTNMVIPFR*HSVTQSLWQNQ Trigger: CTGGTTTTGCCACAGAGATTGGGTCACAGAGTGCCACCTAAATGGTATTACCATATTTGTGTTGTCGCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000562614.1 ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 |
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| CDS GCA 72 bp | CTTGTCCATTTAGCACTGCCTAGCGGCTTTTCAGCCTaGGTTGTCTTAATTCAAGTTGTCATTCATAGACAA | + |
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Preference number: 6 (lower is better) Translates to: LVHLALPSGFSA*VVLIQVVIHRQ Trigger: TTGTCTATGAATGACAACTTGAATTAAGACAACGCAGGCTGAAAAGCCGCTAGGCAGTGCTAAATGGACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 ENST00000669832.1 |
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| CDS GCA 72 bp | GTGGCAATGAGGATGGCTGTTCACAAATCAGCAAAGTaGAGAGCTCTTTCTGTGAGATGCTTAATTTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: VAMRMAVHKSAK*RALSVRCLIFV Trigger: CACAAAAATTAAGCATCTCACAGAAAGAGCTCTGCACTTTGCTGATTTGTGAACAGCCATCCTCATTGCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660155.1 |
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| CDS CAA 90 bp | TGTACAGAGTGTTCATTGGATAAAATCTCAGGCCTGGAGCATCATTaGATTGGGCTACAGAGAATGATGAGGATGATGGTATTTGGGGAT | + |
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Preference number: 6 (lower is better) Translates to: CTECSLDKISGLEHH*IGLQRMMRMMVFGD Trigger: ATCCCCAAATACCATCATCCTCATCATTCTCTGTAGCCCAATCAAATGATGCTCCAGGCCTGAGATTTTATCCAATGAACACTCTGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 ENST00000669832.1 |
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| CDS CAA 72 bp | TGTTCATTGGATAAAATCTCAGGCCTGGAGCATCATTaGATTGGGCTACAGAGAATGATGAGGATGATGGTA | + |
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Preference number: 6 (lower is better) Translates to: CSLDKISGLEHH*IGLQRMMRMMV Trigger: TACCATCATCCTCATCATTCTCTGTAGCCCAATCAAATGATGCTCCAGGCCTGAGATTTTATCCAATGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 ENST00000669832.1 |
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| CDS CAA 90 bp | AGGGTTTCCAAGTTTCCTTCCGCTTCTGAGGGTTATAAACATCTGTaGCATGTCTACAAGTTATTTCTGAAAACCCAGCTTGGACTAATT | + |
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Preference number: 6 (lower is better) Translates to: RVSKFPSASEGYKHL*HVYKLFLKTQLGLI Trigger: AATTAGTCCAAGCTGGGTTTTCAGAAATAACTTGTAGACATGCAACAGATGTTTATAACCCTCAGAAGCGGAAGGAAACTTGGAAACCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 |
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| CDS CAA 72 bp | AAGTTTCCTTCCGCTTCTGAGGGTTATAAACATCTGTaGCATGTCTACAAGTTATTTCTGAAAACCCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: KFPSASEGYKHL*HVYKLFLKTQL Trigger: AAGCTGGGTTTTCAGAAATAACTTGTAGACATGCAACAGATGTTTATAACCCTCAGAAGCGGAAGGAAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000566649.1 ENST00000660155.1 ENST00000661222.1 ENST00000668085.1 |
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