Pregenerated sensors for LINC02139 (Homo sapiens)
Ensembl gene IDs: ENSG00000278214Ensembl transcript IDs: ENST00000612023.1
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GATGGGCCACGGCAGCTGTTGCACAAAGGTGTTCCTGGCTCCAGCTaGCCTCAGGCGAGTCAAGTCTCCTCCTGGGCTGGGGGTTGCACC | + |
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Preference number: 5 (lower is better) Translates to: DGPRQLLHKGVPGSS*PQASQVSSWAGGCT Trigger: GGTGCAACCCCCAGCCCAGGAGGAGACTTGACTCGCCTGAGGTCAGCTGGAGCCAGGAACACCTTTGTGCAACAGCTGCCGTGGCCCATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS GCA 90 bp | GGCACGGGGTCCACGTGTCTCTCACAGATGGGCCACGGCAGCTGTTaGACAAAGGTGTTCCTGGCTCCAGCTGACCTCAGGCGAGTCAAG | + |
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Preference number: 5 (lower is better) Translates to: GTGSTCLSQMGHGSC*TKVFLAPADLRRVK Trigger: CTTGACTCGCCTGAGGTCAGCTGGAGCCAGGAACACCTTTGTGCAACAGCTGCCGTGGCCCATCTGTGAGAGACACGTGGACCCCGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS CCA 90 bp | GTCTCTCACAGATGGGCCACGGCAGCTGTTGCACAAAGGTGTTCCTaGCTCCAGCTGACCTCAGGCGAGTCAAGTCTCCTCCTGGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: VSHRWATAAVAQRCS*LQLTSGESSLLLGW Trigger: CCAGCCCAGGAGGAGACTTGACTCGCCTGAGGTCAGCTGGAGCCAGGAACACCTTTGTGCAACAGCTGCCGTGGCCCATCTGTGAGAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS GCA 90 bp | GGAGCATTTAGCACAGTGCCGGGCACACAGTCCCAGGATGACAGCTaGAGGTCTTCGGGGGTTCCATCTGCTCACGTACGTCTCTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: GAFSTVPGTQSQDDS*RSSGVPSAHVRLCP Trigger: GGGACAGAGACGTACGTGAGCAGATGGAACCCCCGAAGACCTGCAGCTGTCATCCTGGGACTGTGTGCCCGGCACTGTGCTAAATGCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS GCA 90 bp | TCCTGCAAAGGTTACACGAGATGCCCCAGGGAGCATTTAGCACAGTaGCGGGCACACAGTCCCAGGATGACAGCTGCAGGTCTTCGGGGG | + |
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Preference number: 5 (lower is better) Translates to: SCKGYTRCPREHLAQ*RAHSPRMTAAGLRG Trigger: CCCCCGAAGACCTGCAGCTGTCATCCTGGGACTGTGTGCCCGGCACTGTGCTAAATGCTCCCTGGGGCATCTCGTGTAACCTTTGCAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS CCA 90 bp | AACACTGCCTGTTTCGAGGCACGGGGTCCACGTGTCTCTCACAGATaGGCCACGGCAGCTGTTGCACAAAGGTGTTCCTGGCTCCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: NTACFEARGPRVSHR*ATAAVAQRCSWLQL Trigger: CAGCTGGAGCCAGGAACACCTTTGTGCAACAGCTGCCGTGGCCCATCTGTGAGAGACACGTGGACCCCGTGCCTCGAAACAGGCAGTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS GCA 90 bp | GGTTCCATCTGCTCACGTACGTCTCTGTCCCCGTGCTTACAACACTaGCTGTTTCGAGGCACGGGGTCCACGTGTCTCTCACAGATGGGC | + |
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Preference number: 5 (lower is better) Translates to: GSICSRTSLSPCLQH*LFRGTGSTCLSQMG Trigger: GCCCATCTGTGAGAGACACGTGGACCCCGTGCCTCGAAACAGGCAGTGTTGTAAGCACGGGGACAGAGACGTACGTGAGCAGATGGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS TCA 90 bp | CAGTTGCAGTCCCGTGCCTGGCTTCCTTCATTGGCATCTTGTTTTTaGGACTCTTCCAAGCTGCTGCGTGCATGGGTCATTCTTTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: QLQSRAWLPSLASCF*DSSKLLRAWVILSS Trigger: AGAGGAAAGAATGACCCATGCACGCAGCAGCTTGGAAGAGTCTCAAAAACAAGATGCCAATGAAGGAAGCCAGGCACGGGACTGCAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS TCA 90 bp | ATACAGGTGGTGGCTGCACAACCTCATGACTGCACTGAACGCCACTaGATTGTACCCTTTAAAATAGTTAAAGTGGGCCAGGTGCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: IQVVAAQPHDCTERH*IVPFKIVKVGQVQW Trigger: CCACTGCACCTGGCCCACTTTAACTATTTTAAAGGGTACAATTCAGTGGCGTTCAGTGCAGTCATGAGGTTGTGCAGCCACCACCTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS GCA 90 bp | TCCTTCATTGGCATCTTGTTTTTGAGACTCTTCCAAGCTGCTGCGTaGATGGGTCATTCTTTCCTCTTTCCTGATGAGGAGCGTCCCACT | + |
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Preference number: 5 (lower is better) Translates to: SFIGILFLRLFQAAA*MGHSFLFPDEERPT Trigger: AGTGGGACGCTCCTCATCAGGAAAGAGGAAAGAATGACCCATGCACGCAGCAGCTTGGAAGAGTCTCAAAAACAAGATGCCAATGAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS TCA 90 bp | ATTTGGATCGTTGCCAGCTCGAAGTTATTACAGAGAAAGATGCTGTaGACATTTGTGCACAGGTCTTTGTGTGGACATGTGTTCTCATTT | + |
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Preference number: 5 (lower is better) Translates to: IWIVASSKLLQRKML*TFVHRSLCGHVFSF Trigger: AAATGAGAACACATGTCCACACAAAGACCTGTGCACAAATGTTCACAGCATCTTTCTCTGTAATAACTTCGAGCTGGCAACGATCCAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS TCA 72 bp | CGGCAGCTGTTGCACAAAGGTGTTCCTGGCTCCAGCTaGCCTCAGGCGAGTCAAGTCTCCTCCTGGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RQLLHKGVPGSS*PQASQVSSWAG Trigger: CCCAGCCCAGGAGGAGACTTGACTCGCCTGAGGTCAGCTGGAGCCAGGAACACCTTTGTGCAACAGCTGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS GCA 72 bp | AGCACAGTGCCGGGCACACAGTCCCAGGATGACAGCTaGAGGTCTTCGGGGGTTCCATCTGCTCACGTACGT | + |
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Preference number: 6 (lower is better) Translates to: STVPGTQSQDDS*RSSGVPSAHVR Trigger: ACGTACGTGAGCAGATGGAACCCCCGAAGACCTGCAGCTGTCATCCTGGGACTGTGTGCCCGGCACTGTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS GCA 72 bp | TCCACGTGTCTCTCACAGATGGGCCACGGCAGCTGTTaGACAAAGGTGTTCCTGGCTCCAGCTGACCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: STCLSQMGHGSC*TKVFLAPADLR Trigger: CCTGAGGTCAGCTGGAGCCAGGAACACCTTTGTGCAACAGCTGCCGTGGCCCATCTGTGAGAGACACGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS CCA 72 bp | TGTTTCGAGGCACGGGGTCCACGTGTCTCTCACAGATaGGCCACGGCAGCTGTTGCACAAAGGTGTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: CFEARGPRVSHR*ATAAVAQRCSW Trigger: CCAGGAACACCTTTGTGCAACAGCTGCCGTGGCCCATCTGTGAGAGACACGTGGACCCCGTGCCTCGAAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS GCA 72 bp | TGCTCACGTACGTCTCTGTCCCCGTGCTTACAACACTaGCTGTTTCGAGGCACGGGGTCCACGTGTCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: CSRTSLSPCLQH*LFRGTGSTCLS Trigger: TGAGAGACACGTGGACCCCGTGCCTCGAAACAGGCAGTGTTGTAAGCACGGGGACAGAGACGTACGTGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS CAA 90 bp | CAGCTTACAGTTGCAGTCCCGTGCCTGGCTTCCTTCATTGGCATCTaGTTTTTGAGACTCTTCCAAGCTGCTGCGTGCATGGGTCATTCT | + |
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Preference number: 6 (lower is better) Translates to: QLTVAVPCLASFIGI*FLRLFQAAACMGHS Trigger: AGAATGACCCATGCACGCAGCAGCTTGGAAGAGTCTCAAAAACAAGATGCCAATGAAGGAAGCCAGGCACGGGACTGCAACTGTAAGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS TCA 72 bp | TCCCGTGCCTGGCTTCCTTCATTGGCATCTTGTTTTTaGGACTCTTCCAAGCTGCTGCGTGCATGGGTCATT | + |
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Preference number: 6 (lower is better) Translates to: SRAWLPSLASCF*DSSKLLRAWVI Trigger: AATGACCCATGCACGCAGCAGCTTGGAAGAGTCTCAAAAACAAGATGCCAATGAAGGAAGCCAGGCACGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS CCA 72 bp | GCTTACAGTTGCAGTCCCGTGCCTGGCTTCCTTCATTaGCATCTTGTTTTTGAGACTCTTCCAAGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: AYSCSPVPGFLH*HLVFETLPSCC Trigger: GCAGCAGCTTGGAAGAGTCTCAAAAACAAGATGCCAATGAAGGAAGCCAGGCACGGGACTGCAACTGTAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS GCA 72 bp | TGGCCAAGAAAAGGAATGATAGCCCTTGACAACATATaGCTGGAGACAGAAGCCAGACACAAGGCCACACAC | + |
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Preference number: 6 (lower is better) Translates to: WPRKGMIALDNI*LETEARHKATH Trigger: GTGTGTGGCCTTGTGTCTGGCTTCTGTCTCCAGGCATATGTTGTCAAGGGCTATCATTCCTTTTCTTGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS CAA 72 bp | TCCCTGCCAGTTCCCACTCCAGTCCCTGAATGCCACTaGTGGATACTCTGTCCCATATTTTTGCTTTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: SLPVPTPVPECH*WILCPIFLLFL Trigger: CAGGAAAAGCAAAAATATGGGACAGAGTATCCACAAGTGGCATTCAGGGACTGGAGTGGGAACTGGCAGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS CAA 90 bp | ACTCCAGTCCCTGAATGCCACTTGTGGATACTCTGTCCCATATTTTaGCTTTTCCTGGAAGTTCGTACCGCTGGAGTCACACAGAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: TPVPECHLWILCPIF*LFLEVRTAGVTQSH Trigger: GTGACTCTGTGTGACTCCAGCGGTACGAACTTCCAGGAAAAGCAAAAATATGGGACAGAGTATCCACAAGTGGCATTCAGGGACTGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS TCA 72 bp | ATTTCCCCTTTCCCTGCCAGTTCCCACTCCAGTCCCTaGATGCCACTTGTGGATACTCTGTCCCATATTTTT | + |
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Preference number: 6 (lower is better) Translates to: ISPFPASSHSSP*MPLVDTLSHIF Trigger: AAAAATATGGGACAGAGTATCCACAAGTGGCATTCAGGGACTGGAGTGGGAACTGGCAGGGAAAGGGGAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS GCA 72 bp | GGCATCTTGTTTTTGAGACTCTTCCAAGCTGCTGCGTaGATGGGTCATTCTTTCCTCTTTCCTGATGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: GILFLRLFQAAA*MGHSFLFPDEE Trigger: CTCCTCATCAGGAAAGAGGAAAGAATGACCCATGCACGCAGCAGCTTGGAAGAGTCTCAAAAACAAGATGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS GCA 72 bp | AGTCACACAGAGTCACAGCTTACAGTTGCAGTCCCGTaGCTGGCTTCCTTCATTGGCATCTTGTTTTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: SHTESQLTVAVP*LASFIGILFLR Trigger: TCTCAAAAACAAGATGCCAATGAAGGAAGCCAGGCACGGGACTGCAACTGTAAGCTGTGACTCTGTGTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS TCA 72 bp | GTGGCTGCACAACCTCATGACTGCACTGAACGCCACTaGATTGTACCCTTTAAAATAGTTAAAGTGGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: VAAQPHDCTERH*IVPFKIVKVGQ Trigger: CTGGCCCACTTTAACTATTTTAAAGGGTACAATTCAGTGGCGTTCAGTGCAGTCATGAGGTTGTGCAGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS GCA 72 bp | CTGAATGCCACTTGTGGATACTCTGTCCCATATTTTTaGTTTTCCTGGAAGTTCGTACCGCTGGAGTCACAC | + |
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Preference number: 6 (lower is better) Translates to: LNATCGYSVPYF*FSWKFVPLESH Trigger: GTGTGACTCCAGCGGTACGAACTTCCAGGAAAAGCAAAAATATGGGACAGAGTATCCACAAGTGGCATTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS CCA 72 bp | GATGACACCACGGTTTGTTTACCCAGCTCCTGTGGATaGATATTTGGATCGTTGCCAGCTCGAAGTTATTAC | + |
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Preference number: 6 (lower is better) Translates to: DDTTVCLPSSCG*IFGSLPARSYY Trigger: GTAATAACTTCGAGCTGGCAACGATCCAAATATCCATCCACAGGAGCTGGGTAAACAAACCGTGGTGTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS CCA 72 bp | TCCCATATTTTTGCTTTTCCTGGAAGTTCGTACCGCTaGAGTCACACAGAGTCACAGCTTACAGTTGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: SHIFAFPGSSYR*SHTESQLTVAV Trigger: GACTGCAACTGTAAGCTGTGACTCTGTGTGACTCCAGCGGTACGAACTTCCAGGAAAAGCAAAAATATGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS CAA 72 bp | CCTGAATGCCACTTGTGGATACTCTGTCCCATATTTTaGCTTTTCCTGGAAGTTCGTACCGCTGGAGTCACA | + |
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Preference number: 6 (lower is better) Translates to: PECHLWILCPIF*LFLEVRTAGVT Trigger: TGTGACTCCAGCGGTACGAACTTCCAGGAAAAGCAAAAATATGGGACAGAGTATCCACAAGTGGCATTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS GCA 72 bp | GGATCGTTGCCAGCTCGAAGTTATTACAGAGAAAGATaGTGTGAACATTTGTGCACAGGTCTTTGTGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: GSLPARSYYRER*CEHLCTGLCVD Trigger: GTCCACACAAAGACCTGTGCACAAATGTTCACAGCATCTTTCTCTGTAATAACTTCGAGCTGGCAACGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS GCA 72 bp | GTTTACCCAGCTCCTGTGGATGGATATTTGGATCGTTaGCAGCTCGAAGTTATTACAGAGAAAGATGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: VYPAPVDGYLDR*QLEVITEKDAV Trigger: CACAGCATCTTTCTCTGTAATAACTTCGAGCTGGCAACGATCCAAATATCCATCCACAGGAGCTGGGTAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS CAA 90 bp | ACCACGGTTTGTTTACCCAGCTCCTGTGGATGGATATTTGGATCGTaGCCAGCTCGAAGTTATTACAGAGAAAGATGCTGTGAACATTTG | + |
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Preference number: 6 (lower is better) Translates to: TTVCLPSSCGWIFGS*PARSYYRERCCEHL Trigger: CAAATGTTCACAGCATCTTTCTCTGTAATAACTTCGAGCTGGCAACGATCCAAATATCCATCCACAGGAGCTGGGTAAACAAACCGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS CAA 72 bp | TGTTTACCCAGCTCCTGTGGATGGATATTTGGATCGTaGCCAGCTCGAAGTTATTACAGAGAAAGATGCTGT | + |
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Preference number: 6 (lower is better) Translates to: CLPSSCGWIFGS*PARSYYRERCC Trigger: ACAGCATCTTTCTCTGTAATAACTTCGAGCTGGCAACGATCCAAATATCCATCCACAGGAGCTGGGTAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS CAA 90 bp | CCGCACCTGGCCAGTTTCCTTATCTTTATAATGGGAATTAAAAAGTaGGAAACAACCATCTGGCATGCATCAGCAGGTGAACGGATAAAC | + |
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Preference number: 6 (lower is better) Translates to: PHLASFLIFIMGIKK*ETTIWHASAGERIN Trigger: GTTTATCCGTTCACCTGCTGATGCATGCCAGATGGTTGTTTCCAACTTTTTAATTCCCATTATAAAGATAAGGAAACTGGCCAGGTGCGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS CAA 72 bp | GCTCGAAGTTATTACAGAGAAAGATGCTGTGAACATTaGTGCACAGGTCTTTGTGTGGACATGTGTTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: ARSYYRERCCEH*CTGLCVDMCSH Trigger: ATGAGAACACATGTCCACACAAAGACCTGTGCACAAATGTTCACAGCATCTTTCTCTGTAATAACTTCGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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| CDS GCA 72 bp | CGAAGTTATTACAGAGAAAGATGCTGTGAACATTTGTaGACAGGTCTTTGTGTGGACATGTGTTCTCATTTC | + |
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Preference number: 6 (lower is better) Translates to: RSYYRERCCEHL*TGLCVDMCSHF Trigger: GAAATGAGAACACATGTCCACACAAAGACCTGTGCACAAATGTTCACAGCATCTTTCTCTGTAATAACTTCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612023.1 |
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