Pregenerated sensors for LINC02138 (Homo sapiens)
Ensembl gene IDs: ENSG00000205015Ensembl transcript IDs: ENST00000378340.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACACAGGTGGGCCCTGGCCGGGAGCCTGGCGTCGGCCATGGGCCATaGCCTTCCAACATTCTACTCTGGCCGGGAGGCCGCCAGGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: TQVGPGREPGVGHGP*PSNILLWPGGRQGA Trigger: AGCGCCCTGGCGGCCTCCCGGCCAGAGTAGAATGTTGGAAGGGCATGGCCCATGGCCGACGCCAGGCTCCCGGCCAGGGCCCACCTGTGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378340.1 |
||
| CDS CCA 90 bp | GGGCCACCAGCCCCCACGGCCCCTGAGCCCTGGCCTGAGTGCATGTaGCTGGCTCTGGGTAGTGGGCCCTGCAGAGGGACTTCCGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GPPAPTAPEPWPECM*LALGSGPCRGTSAH Trigger: ATGGGCGGAAGTCCCTCTGCAGGGCCCACTACCCAGAGCCAGCCACATGCACTCAGGCCAGGGCTCAGGGGCCGTGGGGGCTGGTGGCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378340.1 |
||
| CDS CCA 90 bp | GAGGCTGGAGGAGGCCGGGGTGAGGAGACAAACACAGGTGGGCCCTaGCCGGGAGCCTGGCGTCGGCCATGGGCCATGCCCTTCCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: EAGGGRGEETNTGGP*PGAWRRPWAMPFQH Trigger: ATGTTGGAAGGGCATGGCCCATGGCCGACGCCAGGCTCCCGGCCAGGGCCCACCTGTGTTTGTCTCCTCACCCCGGCCTCCTCCAGCCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378340.1 |
||
| CDS CCA 90 bp | CCCCCACGGCCCCTGAGCCCTGGCCTGAGTGCATGTGGCTGGCTCTaGGTAGTGGGCCCTGCAGAGGGACTTCCGCCCATAAGTTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PPRPLSPGLSACGWL*VVGPAEGLPPISFP Trigger: CGGGAAACTTATGGGCGGAAGTCCCTCTGCAGGGCCCACTACCCAGAGCCAGCCACATGCACTCAGGCCAGGGCTCAGGGGCCGTGGGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378340.1 |
||
| CDS CCA 90 bp | CACCAGCCCCCACGGCCCCTGAGCCCTGGCCTGAGTGCATGTGGCTaGCTCTGGGTAGTGGGCCCTGCAGAGGGACTTCCGCCCATAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HQPPRPLSPGLSACG*LWVVGPAEGLPPIS Trigger: ACTTATGGGCGGAAGTCCCTCTGCAGGGCCCACTACCCAGAGCCAGCCACATGCACTCAGGCCAGGGCTCAGGGGCCGTGGGGGCTGGTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378340.1 |
||
| CDS CCA 90 bp | ATGCCCTTCCAACATTCTACTCTGGCCGGGAGGCCGCCAGGGCGCTaGGGTGAGGCCGACACCCAGTCCTGGGGCCGTCAGAGCACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: MPFQHSTLAGRPPGR*GEADTQSWGRQSTD Trigger: GTCTGTGCTCTGACGGCCCCAGGACTGGGTGTCGGCCTCACCCCAGCGCCCTGGCGGCCTCCCGGCCAGAGTAGAATGTTGGAAGGGCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378340.1 |
||
| CDS CCA 90 bp | GAGACAAACACAGGTGGGCCCTGGCCGGGAGCCTGGCGTCGGCCATaGGCCATGCCCTTCCAACATTCTACTCTGGCCGGGAGGCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ETNTGGPWPGAWRRP*AMPFQHSTLAGRPP Trigger: TGGCGGCCTCCCGGCCAGAGTAGAATGTTGGAAGGGCATGGCCCATGGCCGACGCCAGGCTCCCGGCCAGGGCCCACCTGTGTTTGTCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378340.1 |
||
| CDS CCA 90 bp | GGCCGGGGTGAGGAGACAAACACAGGTGGGCCCTGGCCGGGAGCCTaGCGTCGGCCATGGGCCATGCCCTTCCAACATTCTACTCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GRGEETNTGGPWPGA*RRPWAMPFQHSTLA Trigger: GGCCAGAGTAGAATGTTGGAAGGGCATGGCCCATGGCCGACGCCAGGCTCCCGGCCAGGGCCCACCTGTGTTTGTCTCCTCACCCCGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378340.1 |
||
| CDS TCA 90 bp | GAAGGCGGCTCCTACCCAGGGTGTGGGGCGTGGAGGGCAGAAGGGTaGCGTCCAGGGAGTTTGGGTGACACCCGACACCAAGGGAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: EGGSYPGCGAWRAEG*RPGSLGDTRHQGRG Trigger: TCCCCTCCCTTGGTGTCGGGTGTCACCCAAACTCCCTGGACGTCACCCTTCTGCCCTCCACGCCCCACACCCTGGGTAGGAGCCGCCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378340.1 |
||
| CDS CCA 90 bp | CAGCTGGATCTCGGGGTGTGGAGGAAGCCAGGCAGTGTCTGTAGCTaGGGCCATCCTGGACCCTGCTGTGCTCCGGCTCTCTGGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QLDLGVWRKPGSVCS*GHPGPCCAPALWAQ Trigger: CTGAGCCCAGAGAGCCGGAGCACAGCAGGGTCCAGGATGGCCCCAGCTACAGACACTGCCTGGCTTCCTCCACACCCCGAGATCCAGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378340.1 |
||
| CDS CCA 72 bp | GGAGGCCGGGGTGAGGAGACAAACACAGGTGGGCCCTaGCCGGGAGCCTGGCGTCGGCCATGGGCCATGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GGRGEETNTGGP*PGAWRRPWAMP Trigger: GGGCATGGCCCATGGCCGACGCCAGGCTCCCGGCCAGGGCCCACCTGTGTTTGTCTCCTCACCCCGGCCTCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378340.1 |
||
| CDS CCA 72 bp | CTGGCGTTGGCCCTGAGACCACCCGAGCCTCCCCGATaGCTGAGGCGAAGGCACAAGGGTGGCCAGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LALALRPPEPPR*LRRRHKGGQAS Trigger: GCTGGCCTGGCCACCCTTGTGCCTTCGCCTCAGCCATCGGGGAGGCTCGGGTGGTCTCAGGGCCAACGCCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378340.1 |
||
| CDS CCA 72 bp | CAACATTCTACTCTGGCCGGGAGGCCGCCAGGGCGCTaGGGTGAGGCCGACACCCAGTCCTGGGGCCGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QHSTLAGRPPGR*GEADTQSWGRQ Trigger: CTGACGGCCCCAGGACTGGGTGTCGGCCTCACCCCAGCGCCCTGGCGGCCTCCCGGCCAGAGTAGAATGTTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378340.1 |
||
| CDS CCA 72 bp | ACAGGTGGGCCCTGGCCGGGAGCCTGGCGTCGGCCATaGGCCATGCCCTTCCAACATTCTACTCTGGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: TGGPWPGAWRRP*AMPFQHSTLAG Trigger: CCCGGCCAGAGTAGAATGTTGGAAGGGCATGGCCCATGGCCGACGCCAGGCTCCCGGCCAGGGCCCACCTGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378340.1 |
||
| CDS CCA 72 bp | CCCCTGAGCCCTGGCCTGAGTGCATGTGGCTGGCTCTaGGTAGTGGGCCCTGCAGAGGGACTTCCGCCCATA | + |
|
Preference number: 6 (lower is better) Translates to: PLSPGLSACGWL*VVGPAEGLPPI Trigger: TATGGGCGGAAGTCCCTCTGCAGGGCCCACTACCCAGAGCCAGCCACATGCACTCAGGCCAGGGCTCAGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378340.1 |
||
| CDS TCA 72 bp | ATATACATGCACACCCCAACCACTAAGGGGCAGGCGTaGTGCGGAACGCTGCGGTTGAGCAAGGTGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: IYMHTPTTKGQA*CGTLRLSKVGW Trigger: CCAGCCCACCTTGCTCAACCGCAGCGTTCCGCATCACGCCTGCCCCTTAGTGGTTGGGGTGTGCATGTATAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378340.1 |
||