Pregenerated sensors for LINC02137 (Homo sapiens)
Ensembl gene IDs: ENSG00000260186Ensembl transcript IDs: ENST00000561906.5, ENST00000562322.1, ENST00000567448.1
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGCCCCTCTCCACCTACCATCTTCCCTTCAGCTTGCTCCGAACCCTaGATGGCTGACCTGGGGGTGCCCTATGGCCTGGGATCCCTTACC | + |
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Preference number: 5 (lower is better) Translates to: CPSPPTIFPSACSEP*MADLGVPYGLGSLT Trigger: GGTAAGGGATCCCAGGCCATAGGGCACCCCCAGGTCAGCCATCCAGGGTTCGGAGCAAGCTGAAGGGAAGATGGTAGGTGGAGAGGGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562322.1 |
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| CDS CCA 90 bp | AGCTGGGTTCTGGCTGCTCACCAGCCCCCTGGTGGCTCTCCTAGCTaGGTTTTACATGCACAGTGCCATCTGCCTAGACTTGACTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SWVLAAHQPPGGSPS*VLHAQCHLPRLDCS Trigger: AGAACAGTCAAGTCTAGGCAGATGGCACTGTGCATGTAAAACCCAGCTAGGAGAGCCACCAGGGGGCTGGTGAGCAGCCAGAACCCAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562322.1 |
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| CDS TCA 90 bp | GGTTCAAATCCTTGTTTTACAGGTGAGGACACTGGCCTGAAGATTTaGAGAGCTGGGTTCTGGCTGCTCACCAGCCCCCTGGTGGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: GSNPCFTGEDTGLKI*RAGFWLLTSPLVAL Trigger: GAGAGCCACCAGGGGGCTGGTGAGCAGCCAGAACCCAGCTCTTCAAATCTTCAGGCCAGTGTCCTCACCTGTAAAACAAGGATTTGAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562322.1 |
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| CDS GCA 90 bp | ATCACAGGAGGCAGCAATTTGGGTTCCTTGCTCTGCGGAAATCCCTaGCTCTCAGTTTCCTCCTTTGCAAAGGTGTGGAGGGAGGTCGGT | + |
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Preference number: 5 (lower is better) Translates to: ITGGSNLGSLLCGNP*LSVSSFAKVWREVG Trigger: ACCGACCTCCCTCCACACCTTTGCAAAGGAGGAAACTGAGAGGCAGGGATTTCCGCAGAGCAAGGAACCCAAATTGCTGCCTCCTGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561906.5 |
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| CDS GCA 90 bp | GGTGGCCACTCTGAGAAATTAGAGACCAAGTGCTCTGTTGGGGATTaGCCAGATACCCCTGGGAAGAGTTCTAGACTTCCAGAGTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: GGHSEKLETKCSVGD*PDTPGKSSRLPESC Trigger: ACAGGACTCTGGAAGTCTAGAACTCTTCCCAGGGGTATCTGGGCAATCCCCAACAGAGCACTTGGTCTCTAATTTCTCAGAGTGGCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567448.1 |
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| CDS CCA 90 bp | CCTACAGCTTGGGGTGCAGTGTATAAATCACAGGAGGCAGCAATTTaGGTTCCTTGCTCTGCGGAAATCCCTGCCTCTCAGTTTCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: PTAWGAVYKSQEAAI*VPCSAEIPASQFPP Trigger: AGGAGGAAACTGAGAGGCAGGGATTTCCGCAGAGCAAGGAACCCAAATTGCTGCCTCCTGTGATTTATACACTGCACCCCAAGCTGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561906.5 |
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| CDS GCA 90 bp | AGTGAGTCCAAAGCAGGTGGCCACTCTGAGAAATTAGAGACCAAGTaGTCTGTTGGGGATTGCCCAGATACCCCTGGGAAGAGTTCTAGA | + |
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Preference number: 5 (lower is better) Translates to: SESKAGGHSEKLETK*SVGDCPDTPGKSSR Trigger: TCTAGAACTCTTCCCAGGGGTATCTGGGCAATCCCCAACAGAGCACTTGGTCTCTAATTTCTCAGAGTGGCCACCTGCTTTGGACTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567448.1 |
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| CDS CCA 90 bp | GGCCTTCGTTCCTCTTCTGAAAGTGTCTTTGCAGTTCAACATGGCTaGGGAGGCCTCAGGAAACTTACGATCATGGCAGAAGGAGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: GLRSSSESVFAVQHG*GGLRKLTIMAEGEA Trigger: TGCTTCTCCTTCTGCCATGATCGTAAGTTTCCTGAGGCCTCCCCAGCCATGTTGAACTGCAAAGACACTTTCAGAAGAGGAACGAAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561906.5 |
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| CDS CCA 90 bp | CTCTGCGGAAATCCCTGCCTCTCAGTTTCCTCCTTTGCAAAGGTGTaGAGGGAGGTCGGTGATGACAGAAGTGAACCTCTATTTCTGACA | + |
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Preference number: 5 (lower is better) Translates to: LCGNPCLSVSSFAKV*REVGDDRSEPLFLT Trigger: TGTCAGAAATAGAGGTTCACTTCTGTCATCACCGACCTCCCTCCACACCTTTGCAAAGGAGGAAACTGAGAGGCAGGGATTTCCGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561906.5 |
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| CDS TCA 90 bp | CGTCGTTCCCCTGATGCTTTTCCTTCCAGGCCTTCGTTCCTCTTCTaGAAGTGTCTTTGCGATCATGGCAGAAGGAGAAGCAAATACATC | + |
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Preference number: 5 (lower is better) Translates to: RRSPDAFPSRPSFLF*KCLCDHGRRRSKYI Trigger: GATGTATTTGCTTCTCCTTCTGCCATGATCGCAAAGACACTTTCAGAAGAGGAACGAAGGCCTGGAAGGAAAAGCATCAGGGGAACGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562322.1 |
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| CDS TCA 90 bp | GAGGGGATCTTGGTGTTCTTTGGGTTCAAATCCTTGTTTTACAGGTaGGGACACTGGCCTGAAGATTTGAAGAGCTGGGTTCTGGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: EGILVFFGFKSLFYR*GHWPEDLKSWVLAA Trigger: AGCAGCCAGAACCCAGCTCTTCAAATCTTCAGGCCAGTGTCCTCACCTGTAAAACAAGGATTTGAACCCAAAGAACACCAAGATCCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562322.1 |
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| CDS CCA 90 bp | TCCTTCCAGGCCTTCGTTCCTCTTCTGAAAGTGTCTTTGCGATCATaGCAGAAGGAGAAGCAAATACATCCTTCTTCACATGGCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SFQAFVPLLKVSLRS*QKEKQIHPSSHGSR Trigger: CCTGCTGCCATGTGAAGAAGGATGTATTTGCTTCTCCTTCTGCCATGATCGCAAAGACACTTTCAGAAGAGGAACGAAGGCCTGGAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562322.1 |
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| CDS CCA 90 bp | GGCATTTGGCAAGTGTTAGCACATAAAGCCGAAGGACAGGCATCTTaGTTTCTCCTCCCTACTTTAAAGTCTCTGGTTGAAAGTCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: GIWQVLAHKAEGQAS*FLLPTLKSLVESLR Trigger: TCTGAGACTTTCAACCAGAGACTTTAAAGTAGGGAGGAGAAACCAAGATGCCTGTCCTTCGGCTTTATGTGCTAACACTTGCCAAATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567448.1 |
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| CDS GCA 72 bp | CAGCTTGCTCCGAACCCTGGATGGCTGACCTGGGGGTaGCCTATGGCCTGGGATCCCTTACCCTGTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: QLAPNPGWLTWG*PMAWDPLPCGF Trigger: GAAGCCACAGGGTAAGGGATCCCAGGCCATAGGGCACCCCCAGGTCAGCCATCCAGGGTTCGGAGCAAGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562322.1 |
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| CDS CCA 72 bp | TCCCTTCAGCTTGCTCCGAACCCTGGATGGCTGACCTaGGGGTGCCCTATGGCCTGGGATCCCTTACCCTGT | + |
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Preference number: 6 (lower is better) Translates to: SLQLAPNPGWLT*GCPMAWDPLPC Trigger: ACAGGGTAAGGGATCCCAGGCCATAGGGCACCCCCAGGTCAGCCATCCAGGGTTCGGAGCAAGCTGAAGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562322.1 |
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| CDS TCA 72 bp | CATCTTCCCTTCAGCTTGCTCCGAACCCTGGATGGCTaGCCTGGGGGTGCCCTATGGCCTGGGATCCCTTAC | + |
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Preference number: 6 (lower is better) Translates to: HLPFSLLRTLDG*PGGALWPGIPY Trigger: GTAAGGGATCCCAGGCCATAGGGCACCCCCAGGTCAGCCATCCAGGGTTCGGAGCAAGCTGAAGGGAAGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562322.1 |
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| CDS GCA 72 bp | ATTTGCCCCTCTCCACCTACCATCTTCCCTTCAGCTTaGTCCGAACCCTGGATGGCTGACCTGGGGGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: ICPSPPTIFPSA*SEPWMADLGVP Trigger: GGGCACCCCCAGGTCAGCCATCCAGGGTTCGGAGCAAGCTGAAGGGAAGATGGTAGGTGGAGAGGGGCAAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562322.1 |
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| CDS CCA 72 bp | AACCCTGGATGGCTGACCTGGGGGTGCCCTATGGCCTaGGATCCCTTACCCTGTGGCTTCTGGTTGGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: NPGWLTWGCPMA*DPLPCGFWLAS Trigger: TGAAGCCAACCAGAAGCCACAGGGTAAGGGATCCCAGGCCATAGGGCACCCCCAGGTCAGCCATCCAGGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562322.1 |
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| CDS CCA 72 bp | CTGGCTGCTCACCAGCCCCCTGGTGGCTCTCCTAGCTaGGTTTTACATGCACAGTGCCATCTGCCTAGACTT | + |
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Preference number: 6 (lower is better) Translates to: LAAHQPPGGSPS*VLHAQCHLPRL Trigger: AAGTCTAGGCAGATGGCACTGTGCATGTAAAACCCAGCTAGGAGAGCCACCAGGGGGCTGGTGAGCAGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000562322.1 |
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| CDS CCA 72 bp | AAGAGCAGAGCCCAGGCCCAGGCCGGGGTGATCAGCTaGAATCCTAGTATGAGAGGGGATCTTGGTGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: KSRAQAQAGVIS*NPSMRGDLGVL Trigger: AAGAACACCAAGATCCCCTCTCATACTAGGATTCCAGCTGATCACCCCGGCCTGGGCCTGGGCTCTGCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562322.1 |
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| CDS CAA 72 bp | GGAGCACAACTTGAAAAGTCTGCCTGTGGCTTCTGGTaGGCTTCAGCCAATGGGAGCACTGGTGGGAGACCG | + |
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Preference number: 6 (lower is better) Translates to: GAQLEKSACGFW*ASANGSTGGRP Trigger: CGGTCTCCCACCAGTGCTCCCATTGGCTGAAGCCAACCAGAAGCCACAGGCAGACTTTTCAAGTTGTGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567448.1 |
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| CDS CAA 90 bp | TGGGTTCCTTGCTCTGCGGAAATCCCTGCCTCTCAGTTTCCTCCTTaGCAAAGGTGTGGAGGGAGGTCGGTGATGACAGAAGTGAACCTC | + |
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Preference number: 6 (lower is better) Translates to: WVPCSAEIPASQFPP*QRCGGRSVMTEVNL Trigger: GAGGTTCACTTCTGTCATCACCGACCTCCCTCCACACCTTTGCAAAGGAGGAAACTGAGAGGCAGGGATTTCCGCAGAGCAAGGAACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561906.5 |
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| CDS GCA 72 bp | GGCAGCAATTTGGGTTCCTTGCTCTGCGGAAATCCCTaGCTCTCAGTTTCCTCCTTTGCAAAGGTGTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GSNLGSLLCGNP*LSVSSFAKVWR Trigger: CCTCCACACCTTTGCAAAGGAGGAAACTGAGAGGCAGGGATTTCCGCAGAGCAAGGAACCCAAATTGCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561906.5 |
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| CDS GCA 72 bp | CCTGGTGGCTCTCCTAGCTGGGTTTTACATGCACAGTaGCATCTGCCTAGACTTGACTGTTCTCCATTTGCC | + |
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Preference number: 6 (lower is better) Translates to: PGGSPSWVLHAQ*HLPRLDCSPFA Trigger: GGCAAATGGAGAACAGTCAAGTCTAGGCAGATGGCACTGTGCATGTAAAACCCAGCTAGGAGAGCCACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562322.1 |
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| CDS GCA 72 bp | AAAGCAGGTGGCCACTCTGAGAAATTAGAGACCAAGTaGTCTGTTGGGGATTGCCCAGATACCCCTGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: KAGGHSEKLETK*SVGDCPDTPGK Trigger: CTTCCCAGGGGTATCTGGGCAATCCCCAACAGAGCACTTGGTCTCTAATTTCTCAGAGTGGCCACCTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567448.1 |
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| CDS CCA 72 bp | TGGGGTGCAGTGTATAAATCACAGGAGGCAGCAATTTaGGTTCCTTGCTCTGCGGAAATCCCTGCCTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: WGAVYKSQEAAI*VPCSAEIPASQ Trigger: CTGAGAGGCAGGGATTTCCGCAGAGCAAGGAACCCAAATTGCTGCCTCCTGTGATTTATACACTGCACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561906.5 |
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| CDS CAA 72 bp | TCCTTCCAGGCCTTCGTTCCTCTTCTGAAAGTGTCTTaGCAGTTCAACATGGCTGGGGAGGCCTCAGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: SFQAFVPLLKVS*QFNMAGEASGN Trigger: GTTTCCTGAGGCCTCCCCAGCCATGTTGAACTGCAAAGACACTTTCAGAAGAGGAACGAAGGCCTGGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561906.5 |
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| CDS TCA 72 bp | CCTGATGCTTTTCCTTCCAGGCCTTCGTTCCTCTTCTaGAAGTGTCTTTGCGGCATTGAGAGCTCTGACCAG | + |
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Preference number: 6 (lower is better) Translates to: PDAFPSRPSFLF*KCLCGIESSDQ Trigger: CTGGTCAGAGCTCTCAATGCCGCAAAGACACTTTCAGAAGAGGAACGAAGGCCTGGAAGGAAAAGCATCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567448.1 |
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| CDS CAA 72 bp | GGCCTTCGTTCCTCTTCTGAAAGTGTCTTTGCGGCATaGAGAGCTCTGACCAGTTCAAGACCCTGGAGCATT | + |
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Preference number: 6 (lower is better) Translates to: GLRSSSESVFAA*RALTSSRPWSI Trigger: AATGCTCCAGGGTCTTGAACTGGTCAGAGCTCTCAATGCCGCAAAGACACTTTCAGAAGAGGAACGAAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567448.1 |
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| CDS CAA 90 bp | GCACAGGTAAGTGATGCTGGATCTACATCAAAGTCTTCCCCAGTCTaGGGAGCACAACTTGAAAAGTCTGCCTGTGGCTTCTGGTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: AQVSDAGSTSKSSPV*GAQLEKSACGFWLA Trigger: AGCCAACCAGAAGCCACAGGCAGACTTTTCAAGTTGTGCTCCCAAGACTGGGGAAGACTTTGATGTAGATCCAGCATCACTTACCTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567448.1 |
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| CDS TCA 72 bp | CCTGATGCTTTTCCTTCCAGGCCTTCGTTCCTCTTCTaGAAGTGTCTTTGCGATCATGGCAGAAGGAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: PDAFPSRPSFLF*KCLCDHGRRRS Trigger: GCTTCTCCTTCTGCCATGATCGCAAAGACACTTTCAGAAGAGGAACGAAGGCCTGGAAGGAAAAGCATCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562322.1 |
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| CDS TCA 72 bp | TACATCAAAGTCTTCCCCAGTCTTGGGAGCACAACTTaGAAAGTCTGCCTGTGGCTTCTGGTTGGCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: YIKVFPSLGSTT*KVCLWLLVGFS Trigger: GCTGAAGCCAACCAGAAGCCACAGGCAGACTTTTCAAGTTGTGCTCCCAAGACTGGGGAAGACTTTGATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567448.1 |
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| CDS GCA 72 bp | TCCTACAGCTTCCTGGCTGTGGAATGTTTGGCAAGCTaGTTACCCTCTCTGAGACGTCATGTCATACTCTGT | + |
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Preference number: 6 (lower is better) Translates to: SYSFLAVECLAS*LPSLRRHVILC Trigger: ACAGAGTATGACATGACGTCTCAGAGAGGGTAAGCAGCTTGCCAAACATTCCACAGCCAGGAAGCTGTAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561906.5 |
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| CDS CAA 72 bp | CTACATCAAAGTCTTCCCCAGTCTTGGGAGCACAACTaGAAAAGTCTGCCTGTGGCTTCTGGTTGGCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: LHQSLPQSWEHN*KSLPVASGWLQ Trigger: CTGAAGCCAACCAGAAGCCACAGGCAGACTTTTCAAGTTGTGCTCCCAAGACTGGGGAAGACTTTGATGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567448.1 |
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| CDS CAA 90 bp | CTTTGCGGCATTGAGAGCTCTGACCAGTTCAAGACCCTGGAGCATTaGACTCCCAAGTTTGAGCTAGATTATTCTGACTCCAGGCCACAA | + |
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Preference number: 6 (lower is better) Translates to: LCGIESSDQFKTLEH*TPKFELDYSDSRPQ Trigger: TTGTGGCCTGGAGTCAGAATAATCTAGCTCAAACTTGGGAGTCAAATGCTCCAGGGTCTTGAACTGGTCAGAGCTCTCAATGCCGCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567448.1 |
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| CDS TCA 72 bp | GTTCAAATCCTTGTTTTACAGGTGAGGACACTGGCCTaGAGATTTGAAGAGCTGGGTTCTGGCTGCTCACCA | + |
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Preference number: 6 (lower is better) Translates to: VQILVLQVRTLA*RFEELGSGCSP Trigger: TGGTGAGCAGCCAGAACCCAGCTCTTCAAATCTTCAGGCCAGTGTCCTCACCTGTAAAACAAGGATTTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562322.1 |
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| CDS TCA 72 bp | TCCAATCACCATAACTGTTCTTGGATCCAGGTCAATTaGCGTTGGTTCTGCAGATGCCTCATCCTGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: SNHHNCSWIQVN*RWFCRCLILEA Trigger: TGCCTCCAGGATGAGGCATCTGCAGAACCAACGTCAATTGACCTGGATCCAAGAACAGTTATGGTGATTGGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567448.1 |
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| CDS GCA 72 bp | TCTGAGAAATTAGAGACCAAGTGCTCTGTTGGGGATTaGCCAGATACCCCTGGGAAGAGTTCTAGACTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SEKLETKCSVGD*PDTPGKSSRLP Trigger: TGGAAGTCTAGAACTCTTCCCAGGGGTATCTGGGCAATCCCCAACAGAGCACTTGGTCTCTAATTTCTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567448.1 |
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| CDS CCA 72 bp | TCCTCTTCTGAAAGTGTCTTTGCAGTTCAACATGGCTaGGGAGGCCTCAGGAAACTTACGATCATGGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SSSESVFAVQHG*GGLRKLTIMAE Trigger: TTCTGCCATGATCGTAAGTTTCCTGAGGCCTCCCCAGCCATGTTGAACTGCAAAGACACTTTCAGAAGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561906.5 |
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| CDS CCA 72 bp | GTGATGCTGGATCTACATCAAAGTCTTCCCCAGTCTTaGGAGCACAACTTGAAAAGTCTGCCTGTGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VMLDLHQSLPQS*EHNLKSLPVAS Trigger: AGAAGCCACAGGCAGACTTTTCAAGTTGTGCTCCCAAGACTGGGGAAGACTTTGATGTAGATCCAGCATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567448.1 |
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| CDS CCA 72 bp | AACATGGCTGGGGAGGCCTCAGGAAACTTACGATCATaGCAGAAGGAGAAGCAAATACATCCTTCTTCACAT | + |
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Preference number: 6 (lower is better) Translates to: NMAGEASGNLRS*QKEKQIHPSSH Trigger: ATGTGAAGAAGGATGTATTTGCTTCTCCTTCTGCCATGATCGTAAGTTTCCTGAGGCCTCCCCAGCCATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561906.5 |
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| CDS CAA 72 bp | TCCTTCCAGGCCTTCGTTCCTCTTCTGAAAGTGTCTTaGCGATCATGGCAGAAGGAGAAGCAAATACATCCT | + |
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Preference number: 6 (lower is better) Translates to: SFQAFVPLLKVS*RSWQKEKQIHP Trigger: AGGATGTATTTGCTTCTCCTTCTGCCATGATCGCAAAGACACTTTCAGAAGAGGAACGAAGGCCTGGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562322.1 |
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| CDS CAA 72 bp | ATTGAGAGCTCTGACCAGTTCAAGACCCTGGAGCATTaGACTCCCAAGTTTGAGCTAGATTATTCTGACTCC | + |
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Preference number: 6 (lower is better) Translates to: IESSDQFKTLEH*TPKFELDYSDS Trigger: GGAGTCAGAATAATCTAGCTCAAACTTGGGAGTCAAATGCTCCAGGGTCTTGAACTGGTCAGAGCTCTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567448.1 |
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| CDS CCA 72 bp | GCCTTCGTTCCTCTTCTGAAAGTGTCTTTGCGATCATaGCAGAAGGAGAAGCAAATACATCCTTCTTCACAT | + |
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Preference number: 6 (lower is better) Translates to: AFVPLLKVSLRS*QKEKQIHPSSH Trigger: ATGTGAAGAAGGATGTATTTGCTTCTCCTTCTGCCATGATCGCAAAGACACTTTCAGAAGAGGAACGAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562322.1 |
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| CDS CCA 72 bp | TGGAATCCTAGTATGAGAGGGGATCTTGGTGTTCTTTaGGTTCAAATCCTTGTTTTACAGGTGAGGACACTG | + |
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Preference number: 6 (lower is better) Translates to: WNPSMRGDLGVL*VQILVLQVRTL Trigger: CAGTGTCCTCACCTGTAAAACAAGGATTTGAACCCAAAGAACACCAAGATCCCCTCTCATACTAGGATTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562322.1 |
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| CDS TCA 72 bp | CCTTGCCATCTCTCTCTTCCTCCTATTGAGCATCGTTaGTCTCCGTATTTTGATCAATTTCCAATCACCATA | + |
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Preference number: 6 (lower is better) Translates to: PCHLSLPPIEHR*SPYFDQFPITI Trigger: TATGGTGATTGGAAATTGATCAAAATACGGAGATCAACGATGCTCAATAGGAGGAAGAGAGAGATGGCAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567448.1 |
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