Pregenerated sensors for LINC02135 (Homo sapiens)
Ensembl gene IDs: ENSG00000268532Ensembl transcript IDs: ENST00000599486.1
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCCGGGGCACGGGACCTGCCAGCAACGGGTACAGGAAGGAGCCATaGGCTGGCCACCTATGCCCAGCAGCGAGCACATGCTGCACGTCA | + |
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Preference number: 5 (lower is better) Translates to: PRGTGPASNGYRKEP*AGHLCPAASTCCTS Trigger: TGACGTGCAGCATGTGCTCGCTGCTGGGCATAGGTGGCCAGCCCATGGCTCCTTCCTGTACCCGTTGCTGGCAGGTCCCGTGCCCCGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 90 bp | GGGCACGGGACCTGCCAGCAACGGGTACAGGAAGGAGCCATGGGCTaGCCACCTATGCCCAGCAGCGAGCACATGCTGCACGTCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: GHGTCQQRVQEGAMG*PPMPSSEHMLHVSF Trigger: GAAGCTGACGTGCAGCATGTGCTCGCTGCTGGGCATAGGTGGCCAGCCCATGGCTCCTTCCTGTACCCGTTGCTGGCAGGTCCCGTGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS TCA 90 bp | AGGTCTTCGCTGATGCCAGCTTCACAGGCACGGGCATCAAGGCCCTaGGACGGGAGAAAGGGTAGGCCTCGCAGGTGCACGTGGGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: RSSLMPASQARASRP*DGRKGRPRRCTWER Trigger: CCTCTCCCACGTGCACCTGCGAGGCCTACCCTTTCTCCCGTCTCAGGGCCTTGATGCCCGTGCCTGTGAAGCTGGCATCAGCGAAGACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 90 bp | CTTGCTCGCAGGTCCCAGTCCCCCAGAATTGCTGTGTGGGTCAGATaGCCTCTCTGTCTGGGTTCACAGTGGGTGGCAGGTGGACTGCCA | + |
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Preference number: 5 (lower is better) Translates to: LARRSQSPRIAVWVR*PLCLGSQWVAGGLP Trigger: TGGCAGTCCACCTGCCACCCACTGTGAACCCAGACAGAGAGGCCATCTGACCCACACAGCAATTCTGGGGGACTGGGACCTGCGAGCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS GCA 90 bp | GGGCTGGGAATCGAACCTTGCTCGCAGGTCCCAGTCCCCCAGAATTaGTGTGTGGGTCAGATGGCCTCTCTGTCTGGGTTCACAGTGGGT | + |
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Preference number: 5 (lower is better) Translates to: GLGIEPCSQVPVPQN*CVGQMASLSGFTVG Trigger: ACCCACTGTGAACCCAGACAGAGAGGCCATCTGACCCACACAGCAATTCTGGGGGACTGGGACCTGCGAGCAAGGTTCGATTCCCAGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS GCA 90 bp | CCGTGTGTCAGAGAGACAGGGACGGATGGGCTGGGAATCGAACCTTaGTCGCAGGTCCCAGTCCCCCAGAATTGCTGTGTGGGTCAGATG | + |
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Preference number: 5 (lower is better) Translates to: PCVRETGTDGLGIEP*SQVPVPQNCCVGQM Trigger: CATCTGACCCACACAGCAATTCTGGGGGACTGGGACCTGCGAGCAAGGTTCGATTCCCAGCCCATCCGTCCCTGTCTCTCTGACACACGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 90 bp | GTGGGTCAGATGGCCTCTCTGTCTGGGTTCACAGTGGGTGGCAGGTaGACTGCCAGCTTCCTCATGCACTCCCTGTGGTCCTGGAGTCAT | + |
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Preference number: 5 (lower is better) Translates to: VGQMASLSGFTVGGR*TASFLMHSLWSWSH Trigger: ATGACTCCAGGACCACAGGGAGTGCATGAGGAAGCTGGCAGTCCACCTGCCACCCACTGTGAACCCAGACAGAGAGGCCATCTGACCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 90 bp | AGCAGAATGCACGTGGTGACCGTGTGTCAGAGAGACAGGGACGGATaGGCTGGGAATCGAACCTTGCTCGCAGGTCCCAGTCCCCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: SRMHVVTVCQRDRDG*AGNRTLLAGPSPPE Trigger: TTCTGGGGGACTGGGACCTGCGAGCAAGGTTCGATTCCCAGCCCATCCGTCCCTGTCTCTCTGACACACGGTCACCACGTGCATTCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 90 bp | TGTGGCCCCTGGAGCAAGGATTTCACAGGATTCAGCTCCGGGGCCTaGCAGCAGAATGCACGTGGTGACCGTGTGTCAGAGAGACAGGGA | + |
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Preference number: 5 (lower is better) Translates to: CGPWSKDFTGFSSGA*QQNARGDRVSERQG Trigger: TCCCTGTCTCTCTGACACACGGTCACCACGTGCATTCTGCTGCCAGGCCCCGGAGCTGAATCCTGTGAAATCCTTGCTCCAGGGGCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS TCA 90 bp | TTTCACAGGATTCAGCTCCGGGGCCTGGCAGCAGAATGCACGTGGTaGCCGTGTGTCAGAGAGACAGGGACGGATGGGCTGGGAATCGAA | + |
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Preference number: 5 (lower is better) Translates to: FHRIQLRGLAAECTW*PCVRETGTDGLGIE Trigger: TTCGATTCCCAGCCCATCCGTCCCTGTCTCTCTGACACACGGTCACCACGTGCATTCTGCTGCCAGGCCCCGGAGCTGAATCCTGTGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 90 bp | GAATCGAACCTTGCTCGCAGGTCCCAGTCCCCCAGAATTGCTGTGTaGGTCAGATGGCCTCTCTGTCTGGGTTCACAGTGGGTGGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: ESNLARRSQSPRIAV*VRWPLCLGSQWVAG Trigger: ACCTGCCACCCACTGTGAACCCAGACAGAGAGGCCATCTGACCCACACAGCAATTCTGGGGGACTGGGACCTGCGAGCAAGGTTCGATTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 90 bp | AATGCACGTGGTGACCGTGTGTCAGAGAGACAGGGACGGATGGGCTaGGAATCGAACCTTGCTCGCAGGTCCCAGTCCCCCAGAATTGCT | + |
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Preference number: 5 (lower is better) Translates to: NARGDRVSERQGRMG*ESNLARRSQSPRIA Trigger: AGCAATTCTGGGGGACTGGGACCTGCGAGCAAGGTTCGATTCCCAGCCCATCCGTCCCTGTCTCTCTGACACACGGTCACCACGTGCATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 90 bp | GGTGGCAGGTGGACTGCCAGCTTCCTCATGCACTCCCTGTGGTCCTaGAGTCATGTCAAACAGTCCCAGGGAGTGGCAGTTATTACCTTG | + |
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Preference number: 5 (lower is better) Translates to: GGRWTASFLMHSLWS*SHVKQSQGVAVITL Trigger: CAAGGTAATAACTGCCACTCCCTGGGACTGTTTGACATGACTCCAGGACCACAGGGAGTGCATGAGGAAGCTGGCAGTCCACCTGCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS GCA 90 bp | CAGCAACTGCTGGGAATATTTGGTGGCCCCCAGGCCTCTCTCTCCTaGCCCAGACATCTCTGTATAAACACTCACCCAACACGACCGTTT | + |
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Preference number: 5 (lower is better) Translates to: QQLLGIFGGPQASLS*PRHLCINTHPTRPF Trigger: AAACGGTCGTGTTGGGTGAGTGTTTATACAGAGATGTCTGGGGCAGGAGAGAGAGGCCTGGGGGCCACCAAATATTCCCAGCAGTTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 90 bp | AGATACGGGCTCACTCTCACTCTCCTCTCCGAATTCTTTGAGGTCTaGACAGAGTCTCGGCTCCCCTGGGGAACCTTCCTATATGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: RYGLTLTLLSEFFEV*TESRLPWGTFLYAS Trigger: AGAGGCATATAGGAAGGTTCCCCAGGGGAGCCGAGACTCTGTCCAGACCTCAAAGAATTCGGAGAGGAGAGTGAGAGTGAGCCCGTATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS GCA 90 bp | GATGTTTTCAGGTCCATAGAGGGCTCCTTCCTGCCGTCCTACAGTTaGTCTAACCGGTCCCCTAGGGAAGGACGATTAGGTGCAAGCTTA | + |
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Preference number: 5 (lower is better) Translates to: DVFRSIEGSFLPSYS*SNRSPREGRLGASL Trigger: TAAGCTTGCACCTAATCGTCCTTCCCTAGGGGACCGGTTAGAGCAACTGTAGGACGGCAGGAAGGAGCCCTCTATGGACCTGAAAACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 90 bp | GATCACTCCTGTCACTGTGCACACAGCCTGGGACCTCCCATCCTGTaGGTTAACTTTTCCTGTCATATTCCTGCCTCCCGGTTACATTGT | + |
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Preference number: 5 (lower is better) Translates to: DHSCHCAHSLGPPIL*VNFSCHIPASRLHC Trigger: ACAATGTAACCGGGAGGCAGGAATATGACAGGAAAAGTTAACCCACAGGATGGGAGGTCCCAGGCTGTGTGCACAGTGACAGGAGTGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 90 bp | ATGAGGGAGGAGGCAGAAAGGCTAACGGCACCCTGGGATGTTATATaGAGATGCCAGGTGGGGTGTGTGTGTGTGTGTGTGTTTACAAGT | + |
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Preference number: 5 (lower is better) Translates to: MREEAERLTAPWDVI*RCQVGCVCVCVFTS Trigger: ACTTGTAAACACACACACACACACACACCCCACCTGGCATCTCCATATAACATCCCAGGGTGCCGTTAGCCTTTCTGCCTCCTCCCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS TCA 90 bp | TTCTATGGAAGAATTCAGAGCTTACTGACAACCACTAACGAGACCTaGGTGAAGCACAGACACACCTGCTCAGCGCCCCTTGACAGATGC | + |
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Preference number: 5 (lower is better) Translates to: FYGRIQSLLTTTNET*VKHRHTCSAPLDRC Trigger: GCATCTGTCAAGGGGCGCTGAGCAGGTGTGTCTGTGCTTCACTCAGGTCTCGTTAGTGGTTGTCAGTAAGCTCTGAATTCTTCCATAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS GCA 90 bp | CCTGGAGTCATGTCAAACAGTCCCAGGGAGTGGCAGTTATTACCTTaGCGGAATCACATTTCTGTCAATGCAGGGTGTTTGATGCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: PGVMSNSPREWQLLP*RNHISVNAGCLMLA Trigger: TGCCAGCATCAAACACCCTGCATTGACAGAAATGTGATTCCGGCAAGGTAATAACTGCCACTCCCTGGGACTGTTTGACATGACTCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS GCA 90 bp | CAGGGAGTGGCAGTTATTACCTTGCCGGAATCACATTTCTGTCAATaGAGGGTGTTTGATGCTGGCATAACAGTGCTTCCATTCGAAACT | + |
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Preference number: 5 (lower is better) Translates to: QGVAVITLPESHFCQ*RVFDAGITVLPFET Trigger: AGTTTCGAATGGAAGCACTGTTATGCCAGCATCAAACACCCTGCATTGACAGAAATGTGATTCCGGCAAGGTAATAACTGCCACTCCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS TCA 90 bp | ATATATGTCACGGACATATTTCCAATCAACATGTACCGTTCTCCTTaGTGTTTTCAGGTCCATAGAGGGCTCCTTCCTGCCGTCCTACAG | + |
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Preference number: 5 (lower is better) Translates to: IYVTDIFPINMYRSP*CFQVHRGLLPAVLQ Trigger: CTGTAGGACGGCAGGAAGGAGCCCTCTATGGACCTGAAAACATCAAGGAGAACGGTACATGTTGATTGGAAATATGTCCGTGACATATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS TCA 90 bp | AGTTATTACCTTGCCGGAATCACATTTCTGTCAATGCAGGGTGTTTaGTGCTGGCATAACAGTGCTTCCATTCGAAACTCACGTACTCAT | + |
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Preference number: 5 (lower is better) Translates to: SYYLAGITFLSMQGV*CWHNSASIRNSRTH Trigger: ATGAGTACGTGAGTTTCGAATGGAAGCACTGTTATGCCAGCATCAAACACCCTGCATTGACAGAAATGTGATTCCGGCAAGGTAATAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 72 bp | ACGGGACCTGCCAGCAACGGGTACAGGAAGGAGCCATaGGCTGGCCACCTATGCCCAGCAGCGAGCACATGC | + |
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Preference number: 6 (lower is better) Translates to: TGPASNGYRKEP*AGHLCPAASTC Trigger: GCATGTGCTCGCTGCTGGGCATAGGTGGCCAGCCCATGGCTCCTTCCTGTACCCGTTGCTGGCAGGTCCCGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS TCA 72 bp | CTGATGCCAGCTTCACAGGCACGGGCATCAAGGCCCTaGGACGGGAGAAAGGGTAGGCCTCGCAGGTGCACG | + |
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Preference number: 6 (lower is better) Translates to: LMPASQARASRP*DGRKGRPRRCT Trigger: CGTGCACCTGCGAGGCCTACCCTTTCTCCCGTCTCAGGGCCTTGATGCCCGTGCCTGTGAAGCTGGCATCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 72 bp | GGTGACCGTGTGTCAGAGAGACAGGGACGGATGGGCTaGGAATCGAACCTTGCTCGCAGGTCCCAGTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: GDRVSERQGRMG*ESNLARRSQSP Trigger: GGGGGACTGGGACCTGCGAGCAAGGTTCGATTCCCAGCCCATCCGTCCCTGTCTCTCTGACACACGGTCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS GCA 72 bp | AACGGGTACAGGAAGGAGCCATGGGCTGGCCACCTATaGCCAGCAGCGAGCACATGCTGCACGTCAGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: NGYRKEPWAGHL*PAASTCCTSAS Trigger: TGAAGCTGACGTGCAGCATGTGCTCGCTGCTGGGCATAGGTGGCCAGCCCATGGCTCCTTCCTGTACCCGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 72 bp | CACGTGGTGACCGTGTGTCAGAGAGACAGGGACGGATaGGCTGGGAATCGAACCTTGCTCGCAGGTCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: HVVTVCQRDRDG*AGNRTLLAGPS Trigger: ACTGGGACCTGCGAGCAAGGTTCGATTCCCAGCCCATCCGTCCCTGTCTCTCTGACACACGGTCACCACGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CAA 90 bp | TGGGCTGGGAATCGAACCTTGCTCGCAGGTCCCAGTCCCCCAGAATaGCTGTGTGGGTCAGATGGCCTCTCTGTCTGGGTTCACAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: WAGNRTLLAGPSPPE*LCGSDGLSVWVHSG Trigger: CCCACTGTGAACCCAGACAGAGAGGCCATCTGACCCACACAGCAATTCTGGGGGACTGGGACCTGCGAGCAAGGTTCGATTCCCAGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS GCA 72 bp | AGAGAGACAGGGACGGATGGGCTGGGAATCGAACCTTaGTCGCAGGTCCCAGTCCCCCAGAATTGCTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: RETGTDGLGIEP*SQVPVPQNCCV Trigger: CACACAGCAATTCTGGGGGACTGGGACCTGCGAGCAAGGTTCGATTCCCAGCCCATCCGTCCCTGTCTCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 72 bp | CTTGCTCGCAGGTCCCAGTCCCCCAGAATTGCTGTGTaGGTCAGATGGCCTCTCTGTCTGGGTTCACAGTGG | + |
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Preference number: 6 (lower is better) Translates to: LARRSQSPRIAV*VRWPLCLGSQW Trigger: CCACTGTGAACCCAGACAGAGAGGCCATCTGACCCACACAGCAATTCTGGGGGACTGGGACCTGCGAGCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CAA 72 bp | CAGAGAGACAGGGACGGATGGGCTGGGAATCGAACCTaGCTCGCAGGTCCCAGTCCCCCAGAATTGCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: QRDRDGWAGNRT*LAGPSPPELLC Trigger: ACACAGCAATTCTGGGGGACTGGGACCTGCGAGCAAGGTTCGATTCCCAGCCCATCCGTCCCTGTCTCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CAA 90 bp | ACCGTGTGTCAGAGAGACAGGGACGGATGGGCTGGGAATCGAACCTaGCTCGCAGGTCCCAGTCCCCCAGAATTGCTGTGTGGGTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: TVCQRDRDGWAGNRT*LAGPSPPELLCGSD Trigger: ATCTGACCCACACAGCAATTCTGGGGGACTGGGACCTGCGAGCAAGGTTCGATTCCCAGCCCATCCGTCCCTGTCTCTCTGACACACGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS GCA 72 bp | ATCGAACCTTGCTCGCAGGTCCCAGTCCCCCAGAATTaGTGTGTGGGTCAGATGGCCTCTCTGTCTGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: IEPCSQVPVPQN*CVGQMASLSGF Trigger: GAACCCAGACAGAGAGGCCATCTGACCCACACAGCAATTCTGGGGGACTGGGACCTGCGAGCAAGGTTCGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 72 bp | TGGAGCAAGGATTTCACAGGATTCAGCTCCGGGGCCTaGCAGCAGAATGCACGTGGTGACCGTGTGTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: WSKDFTGFSSGA*QQNARGDRVSE Trigger: CTCTGACACACGGTCACCACGTGCATTCTGCTGCCAGGCCCCGGAGCTGAATCCTGTGAAATCCTTGCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 72 bp | GGGATGAGGGAGGAGGCAGAAAGGCTAACGGCACCCTaGGATGTTATATGGAGATGCCAGGTGGGGTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: GMREEAERLTAP*DVIWRCQVGCV Trigger: CACACACCCCACCTGGCATCTCCATATAACATCCCAGGGTGCCGTTAGCCTTTCTGCCTCCTCCCTCATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS GCA 72 bp | AGGTCCATAGAGGGCTCCTTCCTGCCGTCCTACAGTTaGTCTAACCGGTCCCCTAGGGAAGGACGATTAGGT | + |
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Preference number: 6 (lower is better) Translates to: RSIEGSFLPSYS*SNRSPREGRLG Trigger: ACCTAATCGTCCTTCCCTAGGGGACCGGTTAGAGCAACTGTAGGACGGCAGGAAGGAGCCCTCTATGGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 72 bp | TCATATTCCTGCCTCCCGGTTACATTGTGTGGCCCCTaGAGCAAGGATTTCACAGGATTCAGCTCCGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SYSCLPVTLCGP*SKDFTGFSSGA Trigger: GGCCCCGGAGCTGAATCCTGTGAAATCCTTGCTCCAGGGGCCACACAATGTAACCGGGAGGCAGGAATATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CAA 72 bp | AATCGAACCTTGCTCGCAGGTCCCAGTCCCCCAGAATaGCTGTGTGGGTCAGATGGCCTCTCTGTCTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: NRTLLAGPSPPE*LCGSDGLSVWV Trigger: AACCCAGACAGAGAGGCCATCTGACCCACACAGCAATTCTGGGGGACTGGGACCTGCGAGCAAGGTTCGATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CAA 72 bp | GATACGGGCTCACTCTCACTCTCCTCTCCGAATTCTTaGAGGTCTGGACAGAGTCTCGGCTCCCCTGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: DTGSLSLSSPNS*RSGQSLGSPGE Trigger: TTCCCCAGGGGAGCCGAGACTCTGTCCAGACCTCAAAGAATTCGGAGAGGAGAGTGAGAGTGAGCCCGTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 72 bp | CTCACTCTCACTCTCCTCTCCGAATTCTTTGAGGTCTaGACAGAGTCTCGGCTCCCCTGGGGAACCTTCCTA | + |
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Preference number: 6 (lower is better) Translates to: LTLTLLSEFFEV*TESRLPWGTFL Trigger: TAGGAAGGTTCCCCAGGGGAGCCGAGACTCTGTCCAGACCTCAAAGAATTCGGAGAGGAGAGTGAGAGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 72 bp | GAGGCAGAAAGGCTAACGGCACCCTGGGATGTTATATaGAGATGCCAGGTGGGGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: EAERLTAPWDVI*RCQVGCVCVCV Trigger: CACACACACACACACACACCCCACCTGGCATCTCCATATAACATCCCAGGGTGCCGTTAGCCTTTCTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CAA 90 bp | GTTATCCCAGATACGGGCTCACTCTCACTCTCCTCTCCGAATTCTTaGAGGTCTGGACAGAGTCTCGGCTCCCCTGGGGAACCTTCCTAT | + |
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Preference number: 6 (lower is better) Translates to: VIPDTGSLSLSSPNS*RSGQSLGSPGEPSY Trigger: ATAGGAAGGTTCCCCAGGGGAGCCGAGACTCTGTCCAGACCTCAAAGAATTCGGAGAGGAGAGTGAGAGTGAGCCCGTATCTGGGATAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS GCA 72 bp | AAAATTGAACCCTCCTGGTGTCTCACTGTCAGCAACTaGTGGGAATATTTGGTGGCCCCCAGGCCTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: KIEPSWCLTVSN*WEYLVAPRPLS Trigger: AGAGAGAGGCCTGGGGGCCACCAAATATTCCCAGCAGTTGCTGACAGTGAGACACCAGGAGGGTTCAATTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 72 bp | TTTCCTGTCATATTCCTGCCTCCCGGTTACATTGTGTaGCCCCTGGAGCAAGGATTTCACAGGATTCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: FPVIFLPPGYIV*PLEQGFHRIQL Trigger: GAGCTGAATCCTGTGAAATCCTTGCTCCAGGGGCCACACAATGTAACCGGGAGGCAGGAATATGACAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CAA 90 bp | TCCTGGAGTCATGTCAAACAGTCCCAGGGAGTGGCAGTTATTACCTaGCCGGAATCACATTTCTGTCAATGCAGGGTGTTTGATGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SWSHVKQSQGVAVIT*PESHFCQCRVFDAG Trigger: GCCAGCATCAAACACCCTGCATTGACAGAAATGTGATTCCGGCAAGGTAATAACTGCCACTCCCTGGGACTGTTTGACATGACTCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS CCA 72 bp | TGTGGTCCTGGAGTCATGTCAAACAGTCCCAGGGAGTaGCAGTTATTACCTTGCCGGAATCACATTTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: CGPGVMSNSPRE*QLLPCRNHISV Trigger: GACAGAAATGTGATTCCGGCAAGGTAATAACTGCCACTCCCTGGGACTGTTTGACATGACTCCAGGACCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS GCA 72 bp | ATGTCAAACAGTCCCAGGGAGTGGCAGTTATTACCTTaGCGGAATCACATTTCTGTCAATGCAGGGTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: MSNSPREWQLLP*RNHISVNAGCL Trigger: CAAACACCCTGCATTGACAGAAATGTGATTCCGGCAAGGTAATAACTGCCACTCCCTGGGACTGTTTGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS TCA 72 bp | CTTGCCGGAATCACATTTCTGTCAATGCAGGGTGTTTaGTGCTGGCATAACAGTGCTTCCATTCGAAACTCA | + |
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Preference number: 6 (lower is better) Translates to: LAGITFLSMQGV*CWHNSASIRNS Trigger: TGAGTTTCGAATGGAAGCACTGTTATGCCAGCATCAAACACCCTGCATTGACAGAAATGTGATTCCGGCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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| CDS GCA 72 bp | GCAGTTATTACCTTGCCGGAATCACATTTCTGTCAATaGAGGGTGTTTGATGCTGGCATAACAGTGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: AVITLPESHFCQ*RVFDAGITVLP Trigger: TGGAAGCACTGTTATGCCAGCATCAAACACCCTGCATTGACAGAAATGTGATTCCGGCAAGGTAATAACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599486.1 |
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