Pregenerated sensors for LINC02126 (Homo sapiens)
Ensembl gene IDs: ENSG00000259847Ensembl transcript IDs: ENST00000562742.2, ENST00000563754.2
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | CAGCCTGCTCCCCTCAGCCACAAGGTTCAAGAGGCACCCTTGGCCTaGACTTTCCTGGCTCTCTCGTCCCTCTTAGCCCTGGCCTTGTCC | + |
Preference number: 5 (lower is better) Translates to: QPAPLSHKVQEAPLA*TFLALSSLLALALS Trigger: GGACAAGGCCAGGGCTAAGAGGGACGAGAGAGCCAGGAAAGTCCAGGCCAAGGGTGCCTCTTGAACCTTGTGGCTGAGGGGAGCAGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562742.2 |
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CDS TCA 90 bp | CCAGTCGCACCACTCCACACCTTTGCCACCTTTGTCACTTTTCTCTaGTGTGCCATCTCTTCATCTCCTCATCAGATGAAAAGTTGCAGC | + |
Preference number: 5 (lower is better) Translates to: PVAPLHTFATFVTFL*CAISSSPHQMKSCS Trigger: GCTGCAACTTTTCATCTGATGAGGAGATGAAGAGATGGCACATCAGAGAAAAGTGACAAAGGTGGCAAAGGTGTGGAGTGGTGCGACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000562742.2 ENST00000563754.2 |
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CDS GCA 90 bp | CGCACCACTCCACACCTTTGCCACCTTTGTCACTTTTCTCTGATGTaGCATCTCTTCATCTCCTCATCAGATGAAAAGTTGCAGCTCCTG | + |
Preference number: 5 (lower is better) Translates to: RTTPHLCHLCHFSLM*HLFISSSDEKLQLL Trigger: CAGGAGCTGCAACTTTTCATCTGATGAGGAGATGAAGAGATGGCACATCAGAGAAAAGTGACAAAGGTGGCAAAGGTGTGGAGTGGTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000562742.2 ENST00000563754.2 |
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CDS CCA 90 bp | TGGCTCTTAAATCTTAGCCAAATCCATTGGTCAGAATTCATCCCATaGGCCTGCCTCTTCAAAGGGGCTGAGAAATATGGAGGAGAACAG | + |
Preference number: 5 (lower is better) Translates to: WLLNLSQIHWSEFIP*ACLFKGAEKYGGEQ Trigger: CTGTTCTCCTCCATATTTCTCAGCCCCTTTGAAGAGGCAGGCCCATGGGATGAATTCTGACCAATGGATTTGGCTAAGATTTAAGAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563754.2 |
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CDS GCA 90 bp | TTAAATCTTAGCCAAATCCATTGGTCAGAATTCATCCCATGGGCCTaGCTCTTCAAAGGGGCTGAGAAATATGGAGGAGAACAGAGGTAT | + |
Preference number: 5 (lower is better) Translates to: LNLSQIHWSEFIPWA*LFKGAEKYGGEQRY Trigger: ATACCTCTGTTCTCCTCCATATTTCTCAGCCCCTTTGAAGAGGCAGGCCCATGGGATGAATTCTGACCAATGGATTTGGCTAAGATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563754.2 |
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CDS GCA 90 bp | ACCCAAGCTTCTGTGTGTAGTCGTAGTCCACTCTGTTTTTACTGCTaGATAGTAATTAATGGTATAGATGTACCACAGTCTGTTGAATTA | + |
Preference number: 5 (lower is better) Translates to: TQASVCSRSPLCFYC*IVINGIDVPQSVEL Trigger: TAATTCAACAGACTGTGGTACATCTATACCATTAATTACTATGCAGCAGTAAAAACAGAGTGGACTACGACTACACACAGAAGCTTGGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562742.2 |
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CDS CAA 90 bp | TCCCAACAGCCTGCTCCCCTCAGCCACAAGGTTCAAGAGGCACCCTaGGCCTGGACTTTCCTGGCTCTCTCGTCCCTCTTAGCCCTGGCC | + |
Preference number: 6 (lower is better) Translates to: SQQPAPLSHKVQEAP*AWTFLALSSLLALA Trigger: GGCCAGGGCTAAGAGGGACGAGAGAGCCAGGAAAGTCCAGGCCAAGGGTGCCTCTTGAACCTTGTGGCTGAGGGGAGCAGGCTGTTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562742.2 |
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CDS CCA 72 bp | CCCCTCAGCCACAAGGTTCAAGAGGCACCCTTGGCCTaGACTTTCCTGGCTCTCTCGTCCCTCTTAGCCCTG | + |
Preference number: 6 (lower is better) Translates to: PLSHKVQEAPLA*TFLALSSLLAL Trigger: CAGGGCTAAGAGGGACGAGAGAGCCAGGAAAGTCCAGGCCAAGGGTGCCTCTTGAACCTTGTGGCTGAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562742.2 |
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CDS TCA 72 bp | GAAGCCTTCGACGAACAGCCTCAGGAATGTAAGGTTTaGAGTGATGCACTCTGGAATGGAAATGCCAGTCGC | + |
Preference number: 6 (lower is better) Translates to: EAFDEQPQECKV*SDALWNGNASR Trigger: GCGACTGGCATTTCCATTCCAGAGTGCATCACTTCAAACCTTACATTCCTGAGGCTGTTCGTCGAAGGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000562742.2 ENST00000563754.2 |
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CDS CAA 72 bp | CTGGAATGGAAATGCCAGTCGCACCACTCCACACCTTaGCCACCTTTGTCACTTTTCTCTGATGTGCCATCT | + |
Preference number: 6 (lower is better) Translates to: LEWKCQSHHSTP*PPLSLFSDVPS Trigger: AGATGGCACATCAGAGAAAAGTGACAAAGGTGGCAAAGGTGTGGAGTGGTGCGACTGGCATTTCCATTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000562742.2 ENST00000563754.2 |
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CDS GCA 72 bp | AGCCAAATCCATTGGTCAGAATTCATCCCATGGGCCTaGCTCTTCAAAGGGGCTGAGAAATATGGAGGAGAA | + |
Preference number: 6 (lower is better) Translates to: SQIHWSEFIPWA*LFKGAEKYGGE Trigger: TTCTCCTCCATATTTCTCAGCCCCTTTGAAGAGGCAGGCCCATGGGATGAATTCTGACCAATGGATTTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563754.2 |
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CDS CCA 72 bp | AATCTTAGCCAAATCCATTGGTCAGAATTCATCCCATaGGCCTGCCTCTTCAAAGGGGCTGAGAAATATGGA | + |
Preference number: 6 (lower is better) Translates to: NLSQIHWSEFIP*ACLFKGAEKYG Trigger: TCCATATTTCTCAGCCCCTTTGAAGAGGCAGGCCCATGGGATGAATTCTGACCAATGGATTTGGCTAAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563754.2 |
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CDS CCA 72 bp | ATGGTGCACTGGCTCTTAAATCTTAGCCAAATCCATTaGTCAGAATTCATCCCATGGGCCTGCCTCTTCAAA | + |
Preference number: 6 (lower is better) Translates to: MVHWLLNLSQIH*SEFIPWACLFK Trigger: TTTGAAGAGGCAGGCCCATGGGATGAATTCTGACCAATGGATTTGGCTAAGATTTAAGAGCCAGTGCACCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563754.2 |
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CDS TCA 72 bp | CCACCAATCCCCTACACCAACCCAAAGGTCTGGCAATaGCTAATCTCCATCTCCATAATGATTTTCTATTTC | + |
Preference number: 6 (lower is better) Translates to: PPIPYTNPKVWQ*LISISIMIFYF Trigger: GAAATAGAAAATCATTATGGAGATGGAGATTAGTCATTGCCAGACCTTTGGGTTGGTGTAGGGGATTGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562742.2 |
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CDS GCA 72 bp | GCTTCTGTGTGTAGTCGTAGTCCACTCTGTTTTTACTaGTGCATAGTAATTAATGGTATAGATGTACCACAG | + |
Preference number: 6 (lower is better) Translates to: ASVCSRSPLCFY*CIVINGIDVPQ Trigger: CTGTGGTACATCTATACCATTAATTACTATGCAGCAGTAAAAACAGAGTGGACTACGACTACACACAGAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562742.2 |
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CDS GCA 72 bp | GTGTGTGTGTGTATAGTTATATACAGTTTTATCACATaGGTGGATTTGGGTAAACACCACCACCACCACATT | + |
Preference number: 6 (lower is better) Translates to: VCVCIVIYSFIT*VDLGKHHHHHI Trigger: AATGTGGTGGTGGTGGTGTTTACCCAAATCCACGCATGTGATAAAACTGTATATAACTATACACACACACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562742.2 |
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CDS GCA 72 bp | TCTGTGTGTAGTCGTAGTCCACTCTGTTTTTACTGCTaGATAGTAATTAATGGTATAGATGTACCACAGTCT | + |
Preference number: 6 (lower is better) Translates to: SVCSRSPLCFYC*IVINGIDVPQS Trigger: AGACTGTGGTACATCTATACCATTAATTACTATGCAGCAGTAAAAACAGAGTGGACTACGACTACACACAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562742.2 |