RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02126 (Homo sapiens)

Ensembl gene IDs: ENSG00000259847

Ensembl transcript IDs: ENST00000562742.2, ENST00000563754.2

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CAGCCTGCTCCCCTCAGCCACAAGGTTCAAGAGGCACCCTTGGCCTaGACTTTCCTGGCTCTCTCGTCCCTCTTAGCCCTGGCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: QPAPLSHKVQEAPLA*TFLALSSLLALALS
Trigger: GGACAAGGCCAGGGCTAAGAGGGACGAGAGAGCCAGGAAAGTCCAGGCCAAGGGTGCCTCTTGAACCTTGTGGCTGAGGGGAGCAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562742.2
CDS TCA 90 bp CCAGTCGCACCACTCCACACCTTTGCCACCTTTGTCACTTTTCTCTaGTGTGCCATCTCTTCATCTCCTCATCAGATGAAAAGTTGCAGC +
Preference number: 5 (lower is better)
Translates to: PVAPLHTFATFVTFL*CAISSSPHQMKSCS
Trigger: GCTGCAACTTTTCATCTGATGAGGAGATGAAGAGATGGCACATCAGAGAAAAGTGACAAAGGTGGCAAAGGTGTGGAGTGGTGCGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562742.2
ENST00000563754.2
CDS GCA 90 bp CGCACCACTCCACACCTTTGCCACCTTTGTCACTTTTCTCTGATGTaGCATCTCTTCATCTCCTCATCAGATGAAAAGTTGCAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: RTTPHLCHLCHFSLM*HLFISSSDEKLQLL
Trigger: CAGGAGCTGCAACTTTTCATCTGATGAGGAGATGAAGAGATGGCACATCAGAGAAAAGTGACAAAGGTGGCAAAGGTGTGGAGTGGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562742.2
ENST00000563754.2
CDS CCA 90 bp TGGCTCTTAAATCTTAGCCAAATCCATTGGTCAGAATTCATCCCATaGGCCTGCCTCTTCAAAGGGGCTGAGAAATATGGAGGAGAACAG +
Preference number: 5 (lower is better)
Translates to: WLLNLSQIHWSEFIP*ACLFKGAEKYGGEQ
Trigger: CTGTTCTCCTCCATATTTCTCAGCCCCTTTGAAGAGGCAGGCCCATGGGATGAATTCTGACCAATGGATTTGGCTAAGATTTAAGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563754.2
CDS GCA 90 bp TTAAATCTTAGCCAAATCCATTGGTCAGAATTCATCCCATGGGCCTaGCTCTTCAAAGGGGCTGAGAAATATGGAGGAGAACAGAGGTAT +
Preference number: 5 (lower is better)
Translates to: LNLSQIHWSEFIPWA*LFKGAEKYGGEQRY
Trigger: ATACCTCTGTTCTCCTCCATATTTCTCAGCCCCTTTGAAGAGGCAGGCCCATGGGATGAATTCTGACCAATGGATTTGGCTAAGATTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563754.2
CDS GCA 90 bp ACCCAAGCTTCTGTGTGTAGTCGTAGTCCACTCTGTTTTTACTGCTaGATAGTAATTAATGGTATAGATGTACCACAGTCTGTTGAATTA +
Preference number: 5 (lower is better)
Translates to: TQASVCSRSPLCFYC*IVINGIDVPQSVEL
Trigger: TAATTCAACAGACTGTGGTACATCTATACCATTAATTACTATGCAGCAGTAAAAACAGAGTGGACTACGACTACACACAGAAGCTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562742.2
CDS CAA 90 bp TCCCAACAGCCTGCTCCCCTCAGCCACAAGGTTCAAGAGGCACCCTaGGCCTGGACTTTCCTGGCTCTCTCGTCCCTCTTAGCCCTGGCC +
Preference number: 6 (lower is better)
Translates to: SQQPAPLSHKVQEAP*AWTFLALSSLLALA
Trigger: GGCCAGGGCTAAGAGGGACGAGAGAGCCAGGAAAGTCCAGGCCAAGGGTGCCTCTTGAACCTTGTGGCTGAGGGGAGCAGGCTGTTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562742.2
CDS CCA 72 bp CCCCTCAGCCACAAGGTTCAAGAGGCACCCTTGGCCTaGACTTTCCTGGCTCTCTCGTCCCTCTTAGCCCTG +
Preference number: 6 (lower is better)
Translates to: PLSHKVQEAPLA*TFLALSSLLAL
Trigger: CAGGGCTAAGAGGGACGAGAGAGCCAGGAAAGTCCAGGCCAAGGGTGCCTCTTGAACCTTGTGGCTGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562742.2
CDS TCA 72 bp GAAGCCTTCGACGAACAGCCTCAGGAATGTAAGGTTTaGAGTGATGCACTCTGGAATGGAAATGCCAGTCGC +
Preference number: 6 (lower is better)
Translates to: EAFDEQPQECKV*SDALWNGNASR
Trigger: GCGACTGGCATTTCCATTCCAGAGTGCATCACTTCAAACCTTACATTCCTGAGGCTGTTCGTCGAAGGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562742.2
ENST00000563754.2
CDS CAA 72 bp CTGGAATGGAAATGCCAGTCGCACCACTCCACACCTTaGCCACCTTTGTCACTTTTCTCTGATGTGCCATCT +
Preference number: 6 (lower is better)
Translates to: LEWKCQSHHSTP*PPLSLFSDVPS
Trigger: AGATGGCACATCAGAGAAAAGTGACAAAGGTGGCAAAGGTGTGGAGTGGTGCGACTGGCATTTCCATTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562742.2
ENST00000563754.2
CDS GCA 72 bp AGCCAAATCCATTGGTCAGAATTCATCCCATGGGCCTaGCTCTTCAAAGGGGCTGAGAAATATGGAGGAGAA +
Preference number: 6 (lower is better)
Translates to: SQIHWSEFIPWA*LFKGAEKYGGE
Trigger: TTCTCCTCCATATTTCTCAGCCCCTTTGAAGAGGCAGGCCCATGGGATGAATTCTGACCAATGGATTTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563754.2
CDS CCA 72 bp AATCTTAGCCAAATCCATTGGTCAGAATTCATCCCATaGGCCTGCCTCTTCAAAGGGGCTGAGAAATATGGA +
Preference number: 6 (lower is better)
Translates to: NLSQIHWSEFIP*ACLFKGAEKYG
Trigger: TCCATATTTCTCAGCCCCTTTGAAGAGGCAGGCCCATGGGATGAATTCTGACCAATGGATTTGGCTAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563754.2
CDS CCA 72 bp ATGGTGCACTGGCTCTTAAATCTTAGCCAAATCCATTaGTCAGAATTCATCCCATGGGCCTGCCTCTTCAAA +
Preference number: 6 (lower is better)
Translates to: MVHWLLNLSQIH*SEFIPWACLFK
Trigger: TTTGAAGAGGCAGGCCCATGGGATGAATTCTGACCAATGGATTTGGCTAAGATTTAAGAGCCAGTGCACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563754.2
CDS TCA 72 bp CCACCAATCCCCTACACCAACCCAAAGGTCTGGCAATaGCTAATCTCCATCTCCATAATGATTTTCTATTTC +
Preference number: 6 (lower is better)
Translates to: PPIPYTNPKVWQ*LISISIMIFYF
Trigger: GAAATAGAAAATCATTATGGAGATGGAGATTAGTCATTGCCAGACCTTTGGGTTGGTGTAGGGGATTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562742.2
CDS GCA 72 bp GCTTCTGTGTGTAGTCGTAGTCCACTCTGTTTTTACTaGTGCATAGTAATTAATGGTATAGATGTACCACAG +
Preference number: 6 (lower is better)
Translates to: ASVCSRSPLCFY*CIVINGIDVPQ
Trigger: CTGTGGTACATCTATACCATTAATTACTATGCAGCAGTAAAAACAGAGTGGACTACGACTACACACAGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562742.2
CDS GCA 72 bp GTGTGTGTGTGTATAGTTATATACAGTTTTATCACATaGGTGGATTTGGGTAAACACCACCACCACCACATT +
Preference number: 6 (lower is better)
Translates to: VCVCIVIYSFIT*VDLGKHHHHHI
Trigger: AATGTGGTGGTGGTGGTGTTTACCCAAATCCACGCATGTGATAAAACTGTATATAACTATACACACACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562742.2
CDS GCA 72 bp TCTGTGTGTAGTCGTAGTCCACTCTGTTTTTACTGCTaGATAGTAATTAATGGTATAGATGTACCACAGTCT +
Preference number: 6 (lower is better)
Translates to: SVCSRSPLCFYC*IVINGIDVPQS
Trigger: AGACTGTGGTACATCTATACCATTAATTACTATGCAGCAGTAAAAACAGAGTGGACTACGACTACACACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562742.2