Pregenerated sensors for LINC02125 (Homo sapiens)
Ensembl gene IDs: ENSG00000250514Ensembl transcript IDs: ENST00000512279.1
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGTGTCACAGGAGAATGGAGGACTCTGCTCCTACATTATTACACTaGGTGTGTTCCATGTTCCATAGTCACCCTCCACCTGGTGTCACA | + |
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Preference number: 5 (lower is better) Translates to: GCHRRMEDSAPTLLH*VCSMFHSHPPPGVT Trigger: TGTGACACCAGGTGGAGGGTGACTATGGAACATGGAACACACGCAGTGTAATAATGTAGGAGCAGAGTCCTCCATTCTCCTGTGACACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS GCA 90 bp | CAGCAAGCGCGGTCTGGGCCTTATTCAAATCTACAAGCTTTTATCTaGTTGGGCAGCATTACAGAGCTGGCTGCTGCCAGTGCAGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: QQARSGPYSNLQAFI*LGSITELAAASAVF Trigger: GAAAACTGCACTGGCAGCAGCCAGCTCTGTAATGCTGCCCAAGCAGATAAAAGCTTGTAGATTTGAATAAGGCCCAGACCGCGCTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS CCA 90 bp | GCCCACTTATATGATCATTGGCAGGATCCAGTTCCCATGAGCTGTTaGGTTGAGGGTTCGTTTTCTAGCTGGCTGTTGGTCAGAGGTTGC | + |
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Preference number: 5 (lower is better) Translates to: AHLYDHWQDPVPMSC*VEGSFSSWLLVRGC Trigger: GCAACCTCTGACCAACAGCCAGCTAGAAAACGAACCCTCAACCCAACAGCTCATGGGAACTGGATCCTGCCAATGATCATATAAGTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS TCA 90 bp | ACTGCCAAGCCCACTTATATGATCATTGGCAGGATCCAGTTCCCATaGGCTGTTGGGTTGAGGGTTCGTTTTCTAGCTGGCTGTTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: TAKPTYMIIGRIQFP*AVGLRVRFLAGCWS Trigger: TGACCAACAGCCAGCTAGAAAACGAACCCTCAACCCAACAGCTCATGGGAACTGGATCCTGCCAATGATCATATAAGTGGGCTTGGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS CCA 90 bp | TCTAGCTGGCTGTTGGTCAGAGGTTGCCCTCAGTTTCTTGCCATGTaGACCTTCCTGATAAAACAACTTGCCTCATCAAAGCCAGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: SSWLLVRGCPQFLAM*TFLIKQLASSKPAK Trigger: CTTTGCTGGCTTTGATGAGGCAAGTTGTTTTATCAGGAAGGTCCACATGGCAAGAAACTGAGGGCAACCTCTGACCAACAGCCAGCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS GCA 90 bp | TGTTGGGTTGAGGGTTCGTTTTCTAGCTGGCTGTTGGTCAGAGGTTaGCCTCAGTTTCTTGCCATGTGGACCTTCCTGATAAAACAACTT | + |
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Preference number: 5 (lower is better) Translates to: CWVEGSFSSWLLVRG*PQFLAMWTFLIKQL Trigger: AAGTTGTTTTATCAGGAAGGTCCACATGGCAAGAAACTGAGGGCAACCTCTGACCAACAGCCAGCTAGAAAACGAACCCTCAACCCAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS CCA 90 bp | TCACACAGGAAAACATCTGTTTCCACAGAGGCAGCAAGCGCGGTCTaGGCCTTATTCAAATCTACAAGCTTTTATCTGCTTGGGCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: SHRKTSVSTEAASAV*ALFKSTSFYLLGQH Trigger: ATGCTGCCCAAGCAGATAAAAGCTTGTAGATTTGAATAAGGCCCAGACCGCGCTTGCTGCCTCTGTGGAAACAGATGTTTTCCTGTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS GCA 90 bp | TCTACAAGCTTTTATCTGCTTGGGCAGCATTACAGAGCTGGCTGCTaGCAGTGCAGTTTTCCTAAATTGACCTGGCTGAGGCAAGAATTA | + |
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Preference number: 5 (lower is better) Translates to: STSFYLLGQHYRAGC*QCSFPKLTWLRQEL Trigger: TAATTCTTGCCTCAGCCAGGTCAATTTAGGAAAACTGCACTGGCAGCAGCCAGCTCTGTAATGCTGCCCAAGCAGATAAAAGCTTGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS GCA 90 bp | ATCTTTCAAAGGAACGTTAGGTTTCCTCCAGGATTCAGCCTAAATTaGACTTATACCCAAAGCCACTCCTTCCCCTCAACCTCCTGGTGT | + |
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Preference number: 5 (lower is better) Translates to: IFQRNVRFPPGFSLN*TYTQSHSFPSTSWC Trigger: ACACCAGGAGGTTGAGGGGAAGGAGTGGCTTTGGGTATAAGTGCAATTTAGGCTGAATCCTGGAGGAAACCTAACGTTCCTTTGAAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS CCA 90 bp | CTTGGAGGTTCTAAGTGTATAATGGGAATGGGTGTCACAGGAGAATaGAGGACTCTGCTCCTACATTATTACACTGCGTGTGTTCCATGT | + |
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Preference number: 5 (lower is better) Translates to: LGGSKCIMGMGVTGE*RTLLLHYYTACVPC Trigger: ACATGGAACACACGCAGTGTAATAATGTAGGAGCAGAGTCCTCCATTCTCCTGTGACACCCATTCCCATTATACACTTAGAACCTCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS TCA 90 bp | CTCATAGGCTGTAATCAAGTTGTCAGCCAGGGTTGTGTTCTTGTCTaGAGTTTTGACTGGGAAAGGATCAACTGCCAAGCCCACTTATAT | + |
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Preference number: 5 (lower is better) Translates to: LIGCNQVVSQGCVLV*SFDWERINCQAHLY Trigger: ATATAAGTGGGCTTGGCAGTTGATCCTTTCCCAGTCAAAACTTCAGACAAGAACACAACCCTGGCTGACAACTTGATTACAGCCTATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS CCA 90 bp | TCACAGGATTTGTGTTCATCTTTCTCCGGCAGACAGACTATAAGATaGCCCCATGGTTTCCATCTCGTGCTTTTGCTCTTGCATAATCTT | + |
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Preference number: 5 (lower is better) Translates to: SQDLCSSFSGRQTIR*PHGFHLVLLLLHNL Trigger: AAGATTATGCAAGAGCAAAAGCACGAGATGGAAACCATGGGGCCATCTTATAGTCTGTCTGCCGGAGAAAGATGAACACAAATCCTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS TCA 72 bp | AGAGCCTCCCGCCAGGAAAGGAGCGGAGCGAGGCAGTaGGCTCTCCAAGAAGCTAGGCGGCTTCCTGGCGCA | + |
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Preference number: 6 (lower is better) Translates to: RASRQERSGARQ*ALQEARRLPGA Trigger: TGCGCCAGGAAGCCGCCTAGCTTCTTGGAGAGCTCACTGCCTCGCTCCGCTCCTTTCCTGGCGGGAGGCTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS CCA 72 bp | CCCATGAGCTGTTGGGTTGAGGGTTCGTTTTCTAGCTaGCTGTTGGTCAGAGGTTGCCCTCAGTTTCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: PMSCWVEGSFSS*LLVRGCPQFLA Trigger: GGCAAGAAACTGAGGGCAACCTCTGACCAACAGCCAGCTAGAAAACGAACCCTCAACCCAACAGCTCATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS CAA 90 bp | GTTCCCATGAGCTGTTGGGTTGAGGGTTCGTTTTCTAGCTGGCTGTaGGTCAGAGGTTGCCCTCAGTTTCTTGCCATGTGGACCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: VPMSCWVEGSFSSWL*VRGCPQFLAMWTFL Trigger: CAGGAAGGTCCACATGGCAAGAAACTGAGGGCAACCTCTGACCAACAGCCAGCTAGAAAACGAACCCTCAACCCAACAGCTCATGGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS CCA 72 bp | GCTGTTGGGTTGAGGGTTCGTTTTCTAGCTGGCTGTTaGTCAGAGGTTGCCCTCAGTTTCTTGCCATGTGGA | + |
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Preference number: 6 (lower is better) Translates to: AVGLRVRFLAGC*SEVALSFLPCG Trigger: TCCACATGGCAAGAAACTGAGGGCAACCTCTGACCAACAGCCAGCTAGAAAACGAACCCTCAACCCAACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS CAA 72 bp | AGCTGTTGGGTTGAGGGTTCGTTTTCTAGCTGGCTGTaGGTCAGAGGTTGCCCTCAGTTTCTTGCCATGTGG | + |
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Preference number: 6 (lower is better) Translates to: SCWVEGSFSSWL*VRGCPQFLAMW Trigger: CCACATGGCAAGAAACTGAGGGCAACCTCTGACCAACAGCCAGCTAGAAAACGAACCCTCAACCCAACAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS GCA 72 bp | GAGGGTTCGTTTTCTAGCTGGCTGTTGGTCAGAGGTTaGCCTCAGTTTCTTGCCATGTGGACCTTCCTGATA | + |
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Preference number: 6 (lower is better) Translates to: EGSFSSWLLVRG*PQFLAMWTFLI Trigger: TATCAGGAAGGTCCACATGGCAAGAAACTGAGGGCAACCTCTGACCAACAGCCAGCTAGAAAACGAACCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS TCA 72 bp | CCCACTTATATGATCATTGGCAGGATCCAGTTCCCATaGGCTGTTGGGTTGAGGGTTCGTTTTCTAGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: PTYMIIGRIQFP*AVGLRVRFLAG Trigger: GCCAGCTAGAAAACGAACCCTCAACCCAACAGCTCATGGGAACTGGATCCTGCCAATGATCATATAAGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS GCA 72 bp | TTTTATCTGCTTGGGCAGCATTACAGAGCTGGCTGCTaGCAGTGCAGTTTTCCTAAATTGACCTGGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: FYLLGQHYRAGC*QCSFPKLTWLR Trigger: CCTCAGCCAGGTCAATTTAGGAAAACTGCACTGGCAGCAGCCAGCTCTGTAATGCTGCCCAAGCAGATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS CCA 72 bp | TATGATCATTGGCAGGATCCAGTTCCCATGAGCTGTTaGGTTGAGGGTTCGTTTTCTAGCTGGCTGTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: YDHWQDPVPMSC*VEGSFSSWLLV Trigger: GACCAACAGCCAGCTAGAAAACGAACCCTCAACCCAACAGCTCATGGGAACTGGATCCTGCCAATGATCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS GCA 72 bp | AGGAGAATGGAGGACTCTGCTCCTACATTATTACACTaGGTGTGTTCCATGTTCCATAGTCACCCTCCACCT | + |
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Preference number: 6 (lower is better) Translates to: RRMEDSAPTLLH*VCSMFHSHPPP Trigger: AGGTGGAGGGTGACTATGGAACATGGAACACACGCAGTGTAATAATGTAGGAGCAGAGTCCTCCATTCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS CAA 72 bp | AGATGGCCCCATGGTTTCCATCTCGTGCTTTTGCTCTaGCATAATCTTCTCCCTTTGAGTGTGGGTCAGACT | + |
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Preference number: 6 (lower is better) Translates to: RWPHGFHLVLLL*HNLLPLSVGQT Trigger: AGTCTGACCCACACTCAAAGGGAGAAGATTATGCAAGAGCAAAAGCACGAGATGGAAACCATGGGGCCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS GCA 72 bp | AGAACTCAGCAGCCTCCATGGCTAATGTGTCCCGTGTaGTTGTCATACTCCATCACCAAAATATGTCTAGCA | + |
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Preference number: 6 (lower is better) Translates to: RTQQPPWLMCPV*LSYSITKICLA Trigger: TGCTAGACATATTTTGGTGATGGAGTATGACAAGCACACGGGACACATTAGCCATGGAGGCTGCTGAGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS CCA 72 bp | CTGTTGGTCAGAGGTTGCCCTCAGTTTCTTGCCATGTaGACCTTCCTGATAAAACAACTTGCCTCATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: LLVRGCPQFLAM*TFLIKQLASSK Trigger: CTTTGATGAGGCAAGTTGTTTTATCAGGAAGGTCCACATGGCAAGAAACTGAGGGCAACCTCTGACCAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS TCA 72 bp | GTTAACCACTGCATCCGGCCAATGAGACAGTTTCTATaGGTGTTACCTGGGCTCTCTCCTTTAGAATTTCTC | + |
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Preference number: 6 (lower is better) Translates to: VNHCIRPMRQFL*VLPGLSPLEFL Trigger: GAGAAATTCTAAAGGAGAGAGCCCAGGTAACACTCATAGAAACTGTCTCATTGGCCGGATGCAGTGGTTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS CCA 72 bp | AAAACATCTGTTTCCACAGAGGCAGCAAGCGCGGTCTaGGCCTTATTCAAATCTACAAGCTTTTATCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: KTSVSTEAASAV*ALFKSTSFYLL Trigger: AAGCAGATAAAAGCTTGTAGATTTGAATAAGGCCCAGACCGCGCTTGCTGCCTCTGTGGAAACAGATGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS CCA 72 bp | CTAATCATGGGAGTGACAACTTTTGCCATATTCTGCTaGTTTGAAACAAACTACTCAGCCAGCACCCATTCA | + |
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Preference number: 6 (lower is better) Translates to: LIMGVTTFAIFC*FETNYSASTHS Trigger: TGAATGGGTGCTGGCTGAGTAGTTTGTTTCAAACCAGCAGAATATGGCAAAAGTTGTCACTCCCATGATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS CAA 72 bp | CATCTCGTGCTTTTGCTCTTGCATAATCTTCTCCCTTaGAGTGTGGGTCAGACTTGTGACTTTGTTTTAACC | + |
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Preference number: 6 (lower is better) Translates to: HLVLLLLHNLLP*SVGQTCDFVLT Trigger: GGTTAAAACAAAGTCACAAGTCTGACCCACACTCAAAGGGAGAAGATTATGCAAGAGCAAAAGCACGAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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| CDS CAA 72 bp | GTTAAGCTCCCACTTATAAATGAGAGCATGCAGTATTaGGTTTTCTCTTCTTGCATTAACTCACTTAGGATA | + |
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Preference number: 6 (lower is better) Translates to: VKLPLINESMQY*VFSSCINSLRI Trigger: TATCCTAAGTGAGTTAATGCAAGAAGAGAAAACCAAATACTGCATGCTCTCATTTATAAGTGGGAGCTTAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512279.1 |
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