Pregenerated sensors for LINC02123 (Homo sapiens)

Ensembl gene IDs: ENSG00000250668

Ensembl transcript IDs: ENST00000514869.1, ENST00000666886.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	AGTTCTCTGGCTGCCTCCTTCCTAAGCTTGGAGGGTGCATTGCCCTaGTTTTCTTTCTATGTGGATGCTGAAATCTTCTCAGTTGTATCA	+
Preference number: 5 (lower is better) Translates to: SSLAASFLSLEGALP*FSFYVDAEIFSVVS Trigger: TGATACAACTGAGAAGATTTCAGCATCCACATAGAAAGAAAAGCAGGGCAATGCACCCTCCAAGCTTAGGAAGGAGGCAGCCAGAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666886.1
CDS GCA 90 bp	AGGACTAAAGCTCAGAAGTGGGCACCTAAAGAGGAGATTTTCTGGTaGATTCTCTTCCACCAATGTTCTAATGCAAAGTCTATCAGGAAA	+
Preference number: 5 (lower is better) Translates to: RTKAQKWAPKEEIFW*ILFHQCSNAKSIRK Trigger: TTTCCTGATAGACTTTGCATTAGAACATTGGTGGAAGAGAATGCACCAGAAAATCTCCTCTTTAGGTGCCCACTTCTGAGCTTTAGTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514869.1
CDS TCA 72 bp	CCCTACCAAAACCCAGCCCCCAACAGCCCGTCCCACTaGGCAGCTGGAGTCCATCCTGTAAGGCAGCAGGCT	+
Preference number: 6 (lower is better) Translates to: PYQNPAPNSPSH*AAGVHPVRQQA Trigger: AGCCTGCTGCCTTACAGGATGGACTCCAGCTGCTCAGTGGGACGGGCTGTTGGGGGCTGGGTTTTGGTAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000514869.1 ENST00000666886.1
CDS CAA 72 bp	GGAGCCAGGAGTTCTCTGGCTGCCTCCTTCCTAAGCTaGGAGGGTGCATTGCCCTGCTTTTCTTTCTATGTG	+
Preference number: 6 (lower is better) Translates to: GARSSLAASFLS*EGALPCFSFYV Trigger: CACATAGAAAGAAAAGCAGGGCAATGCACCCTCCAAGCTTAGGAAGGAGGCAGCCAGAGAACTCCTGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666886.1
CDS CAA 90 bp	CCCCACAAAGGAGCCAGGAGTTCTCTGGCTGCCTCCTTCCTAAGCTaGGAGGGTGCATTGCCCTGCTTTTCTTTCTATGTGGATGCTGAA	+
Preference number: 6 (lower is better) Translates to: PHKGARSSLAASFLS*EGALPCFSFYVDAE Trigger: TTCAGCATCCACATAGAAAGAAAAGCAGGGCAATGCACCCTCCAAGCTTAGGAAGGAGGCAGCCAGAGAACTCCTGGCTCCTTTGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666886.1
CDS GCA 72 bp	GATGCCAGGGCTAGCAGAGTTAAGAGGCAGTGGTTATaGAGCTCTAGTTTCCTAACATACTCGGGCTATGTT	+
Preference number: 6 (lower is better) Translates to: DARASRVKRQWL*SSSFLTYSGYV Trigger: AACATAGCCCGAGTATGTTAGGAAACTAGAGCTGCATAACCACTGCCTCTTAACTCTGCTAGCCCTGGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666886.1
CDS GCA 72 bp	AGTCCATCCTGTAAGGCAGCAGGCTTTTCACATGATTaGCCCGCATATCATTTGCTTTGCATCTCTTTAAAT	+
Preference number: 6 (lower is better) Translates to: SPSCKAAGFSHD*PAYHLLCISLN Trigger: ATTTAAAGAGATGCAAAGCAAATGATATGCGGGGCAATCATGTGAAAAGCCTGCTGCCTTACAGGATGGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000514869.1 ENST00000666886.1
CDS CAA 90 bp	TTTTCTTTCTATGTGGATGCTGAAATCTTCTCAGTTGTATCATGGTaGAAAGCTTCATTATTCCTTTTGCCTGTAAGAAGAGCCTTAGAT	+
Preference number: 6 (lower is better) Translates to: FSFYVDAEIFSVVSW*KASLFLLPVRRALD Trigger: ATCTAAGGCTCTTCTTACAGGCAAAAGGAATAATGAAGCTTTCAACCATGATACAACTGAGAAGATTTCAGCATCCACATAGAAAGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666886.1

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