Pregenerated sensors for LINC02120 (Homo sapiens)
Ensembl gene IDs: ENSG00000248279Ensembl transcript IDs: ENST00000505518.5, ENST00000507693.1
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGAGGGCATATGGAGACAGGTCTTGAGTGCAATTGGAAAACACAGTaGGTCATTTCTGCTTGTCCATTCCAGATGGGTGGAGTAGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: GGHMETGLECNWKTQ*VISACPFQMGGVGF Trigger: AAAGCCTACTCCACCCATCTGGAATGGACAAGCAGAAATGACTCACTGTGTTTTCCAATTGCACTCAAGACCTGTCTCCATATGCCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505518.5 ENST00000507693.1 |
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| CDS TCA 90 bp | CACCTTCTGCTCAAGCAGAGGAGGAGGGCATATGGAGACAGGTCTTaGGTGCAATTGGAAAACACAGTGAGTCATTTCTGCTTGTCCATT | + |
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Preference number: 5 (lower is better) Translates to: HLLLKQRRRAYGDRS*VQLENTVSHFCLSI Trigger: AATGGACAAGCAGAAATGACTCACTGTGTTTTCCAATTGCACTCAAGACCTGTCTCCATATGCCCTCCTCCTCTGCTTGAGCAGAAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505518.5 ENST00000507693.1 |
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| CDS TCA 90 bp | GTGGAGGGTCTTAGAGATCAGGCACTTAGCATAAGGTACACCTTGTaGTGTTATCTGCTTGGTCCAAAGGTCTCGAGAAAGCTCTCTACC | + |
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Preference number: 5 (lower is better) Translates to: VEGLRDQALSIRYTL*CYLLGPKVSRKLST Trigger: GGTAGAGAGCTTTCTCGAGACCTTTGGACCAAGCAGATAACATCACAAGGTGTACCTTATGCTAAGTGCCTGATCTCTAAGACCCTCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505518.5 |
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| CDS TCA 90 bp | TGTCCATTCCAGATGGGTGGAGTAGGCTTTGATGTATTCAACATGTaGGGAACCTGGTGGAATGTTGGGCACGACGATTTCAACCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: CPFQMGGVGFDVFNM*GTWWNVGHDDFNQK Trigger: TTTCTGGTTGAAATCGTCGTGCCCAACATTCCACCAGGTTCCTCACATGTTGAATACATCAAAGCCTACTCCACCCATCTGGAATGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505518.5 ENST00000507693.1 |
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| CDS CCA 90 bp | AGGAGAAAGGATTTTAAGGTCTTGGAAGAAGTCGGAGCCACAGGATaGAAGAAGACTGGACTTGGAATGACTATATGGAAAGTGACTAGA | + |
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Preference number: 5 (lower is better) Translates to: RRKDFKVLEEVGATG*KKTGLGMTIWKVTR Trigger: TCTAGTCACTTTCCATATAGTCATTCCAAGTCCAGTCTTCTTCCATCCTGTGGCTCCGACTTCTTCCAAGACCTTAAAATCCTTTCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505518.5 |
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| CDS CCA 90 bp | CAGTTATCATGGCCAGGACTGATATGTGACTTCTTCCCCAAATTCTaGACAGTTCTTGCTCCACTTGAACTCTATTGTCCATTATTCTCC | + |
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Preference number: 5 (lower is better) Translates to: QLSWPGLICDFFPKF*TVLAPLELYCPLFS Trigger: GGAGAATAATGGACAATAGAGTTCAAGTGGAGCAAGAACTGTCCAGAATTTGGGGAAGAAGTCACATATCAGTCCTGGCCATGATAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505518.5 |
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| CDS CCA 90 bp | CTGCAAATGTCTCAAAATCAAACAGAAATAAGCTTTTCCTTTGTATaGAGGGAGAAGAACCAGCCAGACCTTTGTGGAGGAGAAGGGCAT | + |
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Preference number: 5 (lower is better) Translates to: LQMSQNQTEISFSFV*REKNQPDLCGGEGH Trigger: ATGCCCTTCTCCTCCACAAAGGTCTGGCTGGTTCTTCTCCCTCCATACAAAGGAAAAGCTTATTTCTGTTTGATTTTGAGACATTTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505518.5 |
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| CDS TCA 90 bp | TGTAATTCAGGACTCTGTGCTAGGCGTTGGAGATGCAGTGATGAATaGAGTAAAGCATCTACCCCCATGAAGCTTATAATCTTCTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: CNSGLCARRWRCSDE*SKASTPMKLIIFWK Trigger: TTTCCAGAAGATTATAAGCTTCATGGGGGTAGATGCTTTACTTCATTCATCACTGCATCTCCAACGCCTAGCACAGAGTCCTGAATTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505518.5 |
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| CDS TCA 90 bp | GCAAAAAGGCTGGTTCTAACTAGTCTTCCTTGGCCAAGTGCCCTCTaGTGTTGTAGTGAAGTCAAAGAGCATTTGTCTTCAAGATTCAAT | + |
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Preference number: 5 (lower is better) Translates to: AKRLVLTSLPWPSAL*CCSEVKEHLSSRFN Trigger: ATTGAATCTTGAAGACAAATGCTCTTTGACTTCACTACAACATCAGAGGGCACTTGGCCAAGGAAGACTAGTTAGAACCAGCCTTTTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505518.5 |
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| CDS CCA 90 bp | ATTAAGGATATCAACTTGGATATAGTACATGTGCCCCAGTTATCATaGCCAGGACTGATATGTGACTTCTTCCCCAAATTCTGGACAGTT | + |
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Preference number: 5 (lower is better) Translates to: IKDINLDIVHVPQLS*PGLICDFFPKFWTV Trigger: AACTGTCCAGAATTTGGGGAAGAAGTCACATATCAGTCCTGGCCATGATAACTGGGGCACATGTACTATATCCAAGTTGATATCCTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505518.5 |
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| CDS TCA 90 bp | ATATATCTTCAAGCAGCTCTGTTTTCACATTCAGTAAATAGTTATTaGGCCTGTAATTCAGGACTCTGTGCTAGGCGTTGGAGATGCAGT | + |
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Preference number: 5 (lower is better) Translates to: IYLQAALFSHSVNSY*ACNSGLCARRWRCS Trigger: ACTGCATCTCCAACGCCTAGCACAGAGTCCTGAATTACAGGCTCAATAACTATTTACTGAATGTGAAAACAGAGCTGCTTGAAGATATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505518.5 ENST00000507693.1 |
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| CDS TCA 72 bp | ATGACCAGCTGTCATGTTGTGAGCATGCTGTCTCTCTaGCGCTGGTGGAGGGTCTTAGAGATCAGGCACTTA | + |
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Preference number: 6 (lower is better) Translates to: MTSCHVVSMLSL*RWWRVLEIRHL Trigger: TAAGTGCCTGATCTCTAAGACCCTCCACCAGCGTCAGAGAGACAGCATGCTCACAACATGACAGCTGGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505518.5 |
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| CDS CCA 72 bp | TGTGGAGGAGAAGGGCATAGAGTGTGGGCGAGCAGGTaGCAAAACCAGGATATCTCAATAGGGAGTGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: CGGEGHRVWASR*QNQDISIGSVF Trigger: AAAAACACTCCCTATTGAGATATCCTGGTTTTGCCACCTGCTCGCCCACACTCTATGCCCTTCTCCTCCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505518.5 |
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| CDS CAA 72 bp | TCTGGAAATAGACTAAGCTCTGGTAATGGAATGGAGTaGGAAGTGATGTGTCCTCTCCAGGCCAGGCTCGTG | + |
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Preference number: 6 (lower is better) Translates to: SGNRLSSGNGME*EVMCPLQARLV Trigger: CACGAGCCTGGCCTGGAGAGGACACATCACTTCCAACTCCATTCCATTACCAGAGCTTAGTCTATTTCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505518.5 |
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| CDS TCA 72 bp | CAGATGGGTGGAGTAGGCTTTGATGTATTCAACATGTaGGGAACCTGGTGGAATGTTGGGCACGACGATTTC | + |
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Preference number: 6 (lower is better) Translates to: QMGGVGFDVFNM*GTWWNVGHDDF Trigger: GAAATCGTCGTGCCCAACATTCCACCAGGTTCCTCACATGTTGAATACATCAAAGCCTACTCCACCCATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505518.5 ENST00000507693.1 |
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| CDS TCA 72 bp | CTCAAGCAGAGGAGGAGGGCATATGGAGACAGGTCTTaGGTGCAATTGGAAAACACAGTGAGTCATTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LKQRRRAYGDRS*VQLENTVSHFC Trigger: GCAGAAATGACTCACTGTGTTTTCCAATTGCACTCAAGACCTGTCTCCATATGCCCTCCTCCTCTGCTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505518.5 ENST00000507693.1 |
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| CDS CCA 72 bp | CTTTCACCTTCTGCTCAAGCAGAGGAGGAGGGCATATaGAGACAGGTCTTGAGTGCAATTGGAAAACACAGT | + |
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Preference number: 6 (lower is better) Translates to: LSPSAQAEEEGI*RQVLSAIGKHS Trigger: ACTGTGTTTTCCAATTGCACTCAAGACCTGTCTCCATATGCCCTCCTCCTCTGCTTGAGCAGAAGGTGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505518.5 ENST00000507693.1 |
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| CDS CAA 90 bp | TCACCTTCTGCTCAAGCAGAGGAGGAGGGCATATGGAGACAGGTCTaGAGTGCAATTGGAAAACACAGTGAGTCATTTCTGCTTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: SPSAQAEEEGIWRQV*SAIGKHSESFLLVH Trigger: ATGGACAAGCAGAAATGACTCACTGTGTTTTCCAATTGCACTCAAGACCTGTCTCCATATGCCCTCCTCCTCTGCTTGAGCAGAAGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505518.5 ENST00000507693.1 |
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| CDS TCA 72 bp | GTCAAGCCAAAGCAGAGGGTAAGAAATGAACCGTCATaGACACGTGGTCAGTTCCCCTTGTTCCTTAAGACA | + |
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Preference number: 6 (lower is better) Translates to: VKPKQRVRNEPS*TRGQFPLFLKT Trigger: TGTCTTAAGGAACAAGGGGAACTGACCACGTGTTCATGACGGTTCATTTCTTACCCTCTGCTTTGGCTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505518.5 |
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| CDS CAA 90 bp | ATCTGCTTGGTCCAAAGGTCTCGAGAAAGCTCTCTACCTCTCTGTTaGCAAGACCTACCTCCATCTATAATGGATTTGCTCCCTAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: ICLVQRSRESSLPLC*QDLPPSIMDLLPRS Trigger: ACTTCTAGGGAGCAAATCCATTATAGATGGAGGTAGGTCTTGCAAACAGAGAGGTAGAGAGCTTTCTCGAGACCTTTGGACCAAGCAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505518.5 |
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| CDS TCA 72 bp | TTCTGCTTGTCCATTCCAGATGGGTGGAGTAGGCTTTaGTGTATTCAACATGTGAGGAACCTGGTGGAATGT | + |
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Preference number: 6 (lower is better) Translates to: FCLSIPDGWSRL*CIQHVRNLVEC Trigger: ACATTCCACCAGGTTCCTCACATGTTGAATACATCAAAGCCTACTCCACCCATCTGGAATGGACAAGCAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505518.5 ENST00000507693.1 |
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| CDS TCA 72 bp | ATGGAGACAGGTCTTGAGTGCAATTGGAAAACACAGTaGGTCATTTCTGCTTGTCCATTCCAGATGGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: METGLECNWKTQ*VISACPFQMGG Trigger: TCCACCCATCTGGAATGGACAAGCAGAAATGACTCACTGTGTTTTCCAATTGCACTCAAGACCTGTCTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505518.5 ENST00000507693.1 |
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| CDS TCA 72 bp | CTAAAGTTTGGTCAAGCCAAAGCAGAGGGTAAGAAATaGACCGTCATGAACACGTGGTCAGTTCCCCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: LKFGQAKAEGKK*TVMNTWSVPLV Trigger: AACAAGGGGAACTGACCACGTGTTCATGACGGTTCATTTCTTACCCTCTGCTTTGGCTTGACCAAACTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505518.5 |
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| CDS CCA 72 bp | TGGCCAGGACTGATATGTGACTTCTTCCCCAAATTCTaGACAGTTCTTGCTCCACTTGAACTCTATTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: WPGLICDFFPKF*TVLAPLELYCP Trigger: TGGACAATAGAGTTCAAGTGGAGCAAGAACTGTCCAGAATTTGGGGAAGAAGTCACATATCAGTCCTGGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505518.5 |
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| CDS CAA 72 bp | GTCCAAAGGTCTCGAGAAAGCTCTCTACCTCTCTGTTaGCAAGACCTACCTCCATCTATAATGGATTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: VQRSRESSLPLC*QDLPPSIMDLL Trigger: GAGCAAATCCATTATAGATGGAGGTAGGTCTTGCAAACAGAGAGGTAGAGAGCTTTCTCGAGACCTTTGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505518.5 |
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| CDS TCA 72 bp | CTGGTTCTAACTAGTCTTCCTTGGCCAAGTGCCCTCTaGTGTTGTAGTGAAGTCAAAGAGCATTTGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: LVLTSLPWPSAL*CCSEVKEHLSS Trigger: TGAAGACAAATGCTCTTTGACTTCACTACAACATCAGAGGGCACTTGGCCAAGGAAGACTAGTTAGAACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505518.5 |
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| CDS TCA 72 bp | CTTAGAGATCAGGCACTTAGCATAAGGTACACCTTGTaGTGTTATCTGCTTGGTCCAAAGGTCTCGAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: LRDQALSIRYTL*CYLLGPKVSRK Trigger: CTTTCTCGAGACCTTTGGACCAAGCAGATAACATCACAAGGTGTACCTTATGCTAAGTGCCTGATCTCTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505518.5 |
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| CDS CCA 72 bp | ATCAACTTGGATATAGTACATGTGCCCCAGTTATCATaGCCAGGACTGATATGTGACTTCTTCCCCAAATTC | + |
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Preference number: 6 (lower is better) Translates to: INLDIVHVPQLS*PGLICDFFPKF Trigger: GAATTTGGGGAAGAAGTCACATATCAGTCCTGGCCATGATAACTGGGGCACATGTACTATATCCAAGTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505518.5 |
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| CDS CAA 72 bp | TTGATGTATTCAACATGTGAGGAACCTGGTGGAATGTaGGGCACGACGATTTCAACCAGAAACACCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LMYSTCEEPGGM*GTTISTRNTFS Trigger: AGAAAAGGTGTTTCTGGTTGAAATCGTCGTGCCCAACATTCCACCAGGTTCCTCACATGTTGAATACATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505518.5 ENST00000507693.1 |
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| CDS CAA 72 bp | CTCTGTTTGCAAGACCTACCTCCATCTATAATGGATTaGCTCCCTAGAAGTACTCAACATCTGTTGTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LCLQDLPPSIMD*LPRSTQHLLFL Trigger: CAGGAACAACAGATGTTGAGTACTTCTAGGGAGCAAATCCATTATAGATGGAGGTAGGTCTTGCAAACAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505518.5 |
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| CDS TCA 72 bp | CTTACTTTGGCTAGTTGTTTCTTGATATCTGAATACTaGACAACAGCATCCACTCAATTAGCCTCATATATC | + |
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Preference number: 6 (lower is better) Translates to: LTLASCFLISEY*TTASTQLASYI Trigger: GATATATGAGGCTAATTGAGTGGATGCTGTTGTTCAGTATTCAGATATCAAGAAACAACTAGCCAAAGTAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507693.1 |
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