Pregenerated sensors for LINC02119 (Homo sapiens)
Ensembl gene IDs: ENSG00000248461Ensembl transcript IDs: ENST00000508853.1, ENST00000513039.3, ENST00000652286.1, ENST00000662564.1, ENST00000666505.1, ENST00000669275.1, ENST00000669619.1, ENST00000671526.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCTAGTCACAGTGCCACCTTCACGCCAGGGCCTGGGAGGTCTGTATaGAGGTTACCGGGAAGAATAAGTCAGTTTAGTGAGCATTCGGCC | + |
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Preference number: 5 (lower is better) Translates to: ASHSATFTPGPGRSV*RLPGRISQFSEHSA Trigger: GGCCGAATGCTCACTAAACTGACTTATTCTTCCCGGTAACCTGCATACAGACCTCCCAGGCCCTGGCGTGAAGGTGGCACTGTGACTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000513039.3 ENST00000652286.1 ENST00000666505.1 ENST00000669275.1 ENST00000669619.1 |
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| CDS GCA 90 bp | TCCCTCTCCTTTGCCAGTCATTGGCTAATGGCTGTGCAGGGAGGATaGAACCCCTTAGGCACTTCTGGTTTTCAGGCTTGCAGACAATGG | + |
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Preference number: 5 (lower is better) Translates to: SLSFASHWLMAVQGG*NPLGTSGFQACRQW Trigger: CCATTGTCTGCAAGCCTGAAAACCAGAAGTGCCTAAGGGGTTGCATCCTCCCTGCACAGCCATTAGCCAATGACTGGCAAAGGAGAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000671526.1 |
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| CDS GCA 90 bp | GGCTCCACCAACTGGCATCGGTTGGTCAGGAGTGATTTCTTCCAATaGTGCTTCCATGATGCAAGCAAACAGACACCACTTTTGTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: GSTNWHRLVRSDFFQ*CFHDASKQTPLLFH Trigger: GTGGAACAAAAGTGGTGTCTGTTTGCTTGCATCATGGAAGCAGCATTGGAAGAAATCACTCCTGACCAACCGATGCCAGTTGGTGGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS TCA 90 bp | GTGAAAGTGCTGCACTTGGTACTGAGCAGAACACCAGGCTCTCACTaGATGCTCTCATCACTGGTGGAACGGTCTCTGTTAGTATTTGAT | + |
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Preference number: 5 (lower is better) Translates to: VKVLHLVLSRTPGSH*MLSSLVERSLLVFD Trigger: ATCAAATACTAACAGAGACCGTTCCACCAGTGATGAGAGCATTCAGTGAGAGCCTGGTGTTCTGCTCAGTACCAAGTGCAGCACTTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652286.1 |
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| CDS CCA 90 bp | CTTGATGGGCAATCAGCTAGTTTTAAAAATCTGGGCTCCACCAACTaGCATCGGTTGGTCAGGAGTGATTTCTTCCAATGCTGCTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: LDGQSASFKNLGSTN*HRLVRSDFFQCCFH Trigger: ATGGAAGCAGCATTGGAAGAAATCACTCCTGACCAACCGATGCCAGTTGGTGGAGCCCAGATTTTTAAAACTAGCTGATTGCCCATCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS GCA 90 bp | AAAGTGTGTCTATTCTGTATTGAGAGGTTCCTGTGTCTTCTCCAGTaGCTACTAGAACAGGTTTCCAGGAATACCCCACACTCATATGGC | + |
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Preference number: 5 (lower is better) Translates to: KVCLFCIERFLCLLQ*LLEQVSRNTPHSYG Trigger: GCCATATGAGTGTGGGGTATTCCTGGAAACCTGTTCTAGTAGGCACTGGAGAAGACACAGGAACCTCTCAATACAGAATAGACACACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000513039.3 ENST00000669275.1 |
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| CDS GCA 90 bp | TTTACAAAGTGTAATGCTAGGGTAGACTGGCATGTCCACAGTGGATaGATTCCCACTGCAGAAGACGAAATTCTTGTCAGATCCCAAAGG | + |
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Preference number: 5 (lower is better) Translates to: FTKCNARVDWHVHSG*IPTAEDEILVRSQR Trigger: CCTTTGGGATCTGACAAGAATTTCGTCTTCTGCAGTGGGAATGCATCCACTGTGGACATGCCAGTCTACCCTAGCATTACACTTTGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669275.1 |
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| CDS TCA 90 bp | GGTAAGCAAGAGGATATGTGGGTCCAGAGCACTGATATAGGGCTGTaGTTCAGATTATGCCTTTGGTCATTGGTCATCATTGTCTTCAAA | + |
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Preference number: 5 (lower is better) Translates to: GKQEDMWVQSTDIGL*FRLCLWSLVIIVFK Trigger: TTTGAAGACAATGATGACCAATGACCAAAGGCATAATCTGAATCACAGCCCTATATCAGTGCTCTGGACCCACATATCCTCTTGCTTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS TCA 90 bp | TATGCCTTTGGTCATTGGTCATCATTGTCTTCAAACTGCATATTATaGACACCAATTGTATTGGGGACTGTTAGGTATGGAGGGGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: YAFGHWSSLSSNCIL*TPIVLGTVRYGGEG Trigger: GCCTTCCCCTCCATACCTAACAGTCCCCAATACAATTGGTGTTCATAATATGCAGTTTGAAGACAATGATGACCAATGACCAAAGGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS TCA 90 bp | AAGAGGTGCTTATATGCCAGGATACAAGAGGTGCTGGGCGTAGGATaGATGGACATCAGTTTGAAAATCTCTCTAGTCCTAATTAGTGTA | + |
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Preference number: 5 (lower is better) Translates to: KRCLYARIQEVLGVG*MDISLKISLVLISV Trigger: TACACTAATTAGGACTAGAGAGATTTTCAAACTGATGTCCATTCATCCTACGCCCAGCACCTCTTGTATCCTGGCATATAAGCACCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669275.1 |
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| CDS GCA 90 bp | AGCTCATACATACATGTTAAATTGCTAATAGAAGAGGTGCTTATATaGCAGGATACAAGAGGTGCTGGGCGTAGGATGAATGGACATCAG | + |
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Preference number: 5 (lower is better) Translates to: SSYIHVKLLIEEVLI*QDTRGAGRRMNGHQ Trigger: CTGATGTCCATTCATCCTACGCCCAGCACCTCTTGTATCCTGGCATATAAGCACCTCTTCTATTAGCAATTTAACATGTATGTATGAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669275.1 |
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| CDS TCA 90 bp | ATTAGAGTTTACCGTCTTCAGACTTCTATTGCTATATCTTGGGAATaGAAGGAAGAAAGGATGTGGACTGGAATCTTCTGTGCCTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: IRVYRLQTSIAISWE*KEERMWTGIFCAWK Trigger: TTTCCAGGCACAGAAGATTCCAGTCCACATCCTTTCTTCCTTTCATTCCCAAGATATAGCAATAGAAGTCTGAAGACGGTAAACTCTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS GCA 90 bp | AAAATAATAAGAAACTTGATTGTGGCTCAGCTGTATCGTCACCCCTaGTCTCTTGGCTGTTGTTTACAGAACTCAAATTGGAAGATAAGC | + |
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Preference number: 5 (lower is better) Translates to: KIIRNLIVAQLYRHP*SLGCCLQNSNWKIS Trigger: GCTTATCTTCCAATTTGAGTTCTGTAAACAACAGCCAAGAGAGCAGGGGTGACGATACAGCTGAGCCACAATCAAGTTTCTTATTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS GCA 90 bp | TTTAAATTAAAAACTAAGGAGTTTGTCCACAAGGGATACAAGAGGTaGCTGTGTCCTTTGATACAAGCTCATACATACATGTTAAATTGC | + |
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Preference number: 5 (lower is better) Translates to: FKLKTKEFVHKGYKR*LCPLIQAHTYMLNC Trigger: GCAATTTAACATGTATGTATGAGCTTGTATCAAAGGACACAGGCACCTCTTGTATCCCTTGTGGACAAACTCCTTAGTTTTTAATTTAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669275.1 |
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| CDS CAA 72 bp | CTGTATCCCCACGCCCTGAAACTCACAAATGCCTTCTaGATGGGCTGGCTCCTGGAACTGTATAGCCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: LYPHALKLTNAF*MGWLLELYSPH Trigger: GTGGGGGCTATACAGTTCCAGGAGCCAGCCCATCAAGAAGGCATTTGTGAGTTTCAGGGCGTGGGGATACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS GCA 72 bp | AGTGCCACCTTCACGCCAGGGCCTGGGAGGTCTGTATaGAGGTTACCGGGAAGAATAAGTCAGTTTAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: SATFTPGPGRSV*RLPGRISQFSE Trigger: CTCACTAAACTGACTTATTCTTCCCGGTAACCTGCATACAGACCTCCCAGGCCCTGGCGTGAAGGTGGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000513039.3 ENST00000652286.1 ENST00000666505.1 ENST00000669275.1 ENST00000669619.1 |
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| CDS GCA 72 bp | TTTGCCAGTCATTGGCTAATGGCTGTGCAGGGAGGATaGAACCCCTTAGGCACTTCTGGTTTTCAGGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: FASHWLMAVQGG*NPLGTSGFQAC Trigger: GCAAGCCTGAAAACCAGAAGTGCCTAAGGGGTTGCATCCTCCCTGCACAGCCATTAGCCAATGACTGGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000671526.1 |
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| CDS CCA 72 bp | AGGGAGGGAGAGAGTCAGGCTGGTGGGTTCATCCCTTaGACATCCTTCTTGATGGGCAATCAGCTAGTTTTA | + |
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Preference number: 6 (lower is better) Translates to: REGESQAGGFIP*TSFLMGNQLVL Trigger: TAAAACTAGCTGATTGCCCATCAAGAAGGATGTCCAAGGGATGAACCCACCAGCCTGACTCTCTCCCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS CAA 90 bp | GAGGGAGAGAGTCAGGCTGGTGGGTTCATCCCTTGGACATCCTTCTaGATGGGCAATCAGCTAGTTTTAAAAATCTGGGCTCCACCAACT | + |
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Preference number: 6 (lower is better) Translates to: EGESQAGGFIPWTSF*MGNQLVLKIWAPPT Trigger: AGTTGGTGGAGCCCAGATTTTTAAAACTAGCTGATTGCCCATCAAGAAGGATGTCCAAGGGATGAACCCACCAGCCTGACTCTCTCCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS CCA 72 bp | TTCCTTTCTGGCAAGATGCCTCCTGGTAAACATCACTaGGTAAGCAAGAGGATATGTGGGTCCAGAGCACTG | + |
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Preference number: 6 (lower is better) Translates to: FLSGKMPPGKHH*VSKRICGSRAL Trigger: CAGTGCTCTGGACCCACATATCCTCTTGCTTACCCAGTGATGTTTACCAGGAGGCATCTTGCCAGAAAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS TCA 72 bp | CTGGTTTTCAGGCTTGCAGACAATGGGGCAGTCCTCTaGGAGAGTCACAAGGGTGAACCTCTGTTAGTATTT | + |
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Preference number: 6 (lower is better) Translates to: LVFRLADNGAVL*ESHKGEPLLVF Trigger: AAATACTAACAGAGGTTCACCCTTGTGACTCTCTCAGAGGACTGCCCCATTGTCTGCAAGCCTGAAAACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671526.1 |
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| CDS GCA 72 bp | GGTAGACTGGCATGTCCACAGTGGATGCATTCCCACTaGAGAAGACGAAATTCTTGTCAGATCCCAAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: GRLACPQWMHSH*RRRNSCQIPKE Trigger: TTCCTTTGGGATCTGACAAGAATTTCGTCTTCTGCAGTGGGAATGCATCCACTGTGGACATGCCAGTCTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669275.1 |
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| CDS CAA 90 bp | CAATCAGCTAGTTTTAAAAATCTGGGCTCCACCAACTGGCATCGGTaGGTCAGGAGTGATTTCTTCCAATGCTGCTTCCATGATGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: QSASFKNLGSTNWHR*VRSDFFQCCFHDAS Trigger: GCTTGCATCATGGAAGCAGCATTGGAAGAAATCACTCCTGACCAACCGATGCCAGTTGGTGGAGCCCAGATTTTTAAAACTAGCTGATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS TCA 72 bp | TTAGTGAGCATTCGGCCCATAAAACCACCGTGCAGGTaGGGAAACTGCTGCAAAGTATCTACTGCTACAAAG | + |
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Preference number: 6 (lower is better) Translates to: LVSIRPIKPPCR*GNCCKVSTATK Trigger: CTTTGTAGCAGTAGATACTTTGCAGCAGTTTCCTCACCTGCACGGTGGTTTTATGGGCCGAATGCTCACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669619.1 |
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| CDS GCA 72 bp | AACTGGCATCGGTTGGTCAGGAGTGATTTCTTCCAATaGTGCTTCCATGATGCAAGCAAACAGACACCACTT | + |
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Preference number: 6 (lower is better) Translates to: NWHRLVRSDFFQ*CFHDASKQTPL Trigger: AAGTGGTGTCTGTTTGCTTGCATCATGGAAGCAGCATTGGAAGAAATCACTCCTGACCAACCGATGCCAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS GCA 72 bp | CTATTCTGTATTGAGAGGTTCCTGTGTCTTCTCCAGTaGCTACTAGAACAGGTTTCCAGGAATACCCCACAC | + |
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Preference number: 6 (lower is better) Translates to: LFCIERFLCLLQ*LLEQVSRNTPH Trigger: GTGTGGGGTATTCCTGGAAACCTGTTCTAGTAGGCACTGGAGAAGACACAGGAACCTCTCAATACAGAATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000513039.3 ENST00000669275.1 |
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| CDS GCA 72 bp | TGTAATGCTAGGGTAGACTGGCATGTCCACAGTGGATaGATTCCCACTGCAGAAGACGAAATTCTTGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: CNARVDWHVHSG*IPTAEDEILVR Trigger: TCTGACAAGAATTTCGTCTTCTGCAGTGGGAATGCATCCACTGTGGACATGCCAGTCTACCCTAGCATTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669275.1 |
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| CDS CCA 72 bp | GTTTTAAAAATCTGGGCTCCACCAACTGGCATCGGTTaGTCAGGAGTGATTTCTTCCAATGCTGCTTCCATG | + |
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Preference number: 6 (lower is better) Translates to: VLKIWAPPTGIG*SGVISSNAASM Trigger: CATGGAAGCAGCATTGGAAGAAATCACTCCTGACCAACCGATGCCAGTTGGTGGAGCCCAGATTTTTAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS CCA 72 bp | GTGGTCAGCCTGAGATCTCTGACATTATTGCCATCCTaGTTGAATCATCTTCAACATCCAAGACAGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: VVSLRSLTLLPS*LNHLQHPRQAL Trigger: CAGAGCCTGTCTTGGATGTTGAAGATGATTCAACCAGGATGGCAATAATGTCAGAGATCTCAGGCTGACCAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662564.1 |
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| CDS CCA 72 bp | TCGTGTTGGTTTACAAAGTGTAATGCTAGGGTAGACTaGCATGTCCACAGTGGATGCATTCCCACTGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SCWFTKCNARVD*HVHSGCIPTAE Trigger: TTCTGCAGTGGGAATGCATCCACTGTGGACATGCCAGTCTACCCTAGCATTACACTTTGTAAACCAACACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669275.1 |
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| CDS CAA 90 bp | GGCATGTCCACAGTGGATGCATTCCCACTGCAGAAGACGAAATTCTaGTCAGATCCCAAAGGAAAAATGGGAATTGTGGCTTTGGAATTG | + |
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Preference number: 6 (lower is better) Translates to: GMSTVDAFPLQKTKF*SDPKGKMGIVALEL Trigger: CAATTCCAAAGCCACAATTCCCATTTTTCCTTTGGGATCTGACAAGAATTTCGTCTTCTGCAGTGGGAATGCATCCACTGTGGACATGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669275.1 |
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| CDS GCA 72 bp | AGAAACTTGATTGTGGCTCAGCTGTATCGTCACCCCTaGTCTCTTGGCTGTTGTTTACAGAACTCAAATTGG | + |
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Preference number: 6 (lower is better) Translates to: RNLIVAQLYRHP*SLGCCLQNSNW Trigger: CCAATTTGAGTTCTGTAAACAACAGCCAAGAGAGCAGGGGTGACGATACAGCTGAGCCACAATCAAGTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS CCA 72 bp | CAATCAGCTAGTTTTAAAAATCTGGGCTCCACCAACTaGCATCGGTTGGTCAGGAGTGATTTCTTCCAATGC | + |
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Preference number: 6 (lower is better) Translates to: QSASFKNLGSTN*HRLVRSDFFQC Trigger: GCATTGGAAGAAATCACTCCTGACCAACCGATGCCAGTTGGTGGAGCCCAGATTTTTAAAACTAGCTGATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS CAA 72 bp | AGTTTTAAAAATCTGGGCTCCACCAACTGGCATCGGTaGGTCAGGAGTGATTTCTTCCAATGCTGCTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: SFKNLGSTNWHR*VRSDFFQCCFH Trigger: ATGGAAGCAGCATTGGAAGAAATCACTCCTGACCAACCGATGCCAGTTGGTGGAGCCCAGATTTTTAAAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS CAA 90 bp | GAGTTGACTTCACATGTACTCCTGAACCTGAGATCTCTGACATTATaGCCATCCTGGTTGAATCATCTTCAACATCCAAGACAGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: ELTSHVLLNLRSLTL*PSWLNHLQHPRQAL Trigger: CAGAGCCTGTCTTGGATGTTGAAGATGATTCAACCAGGATGGCAATAATGTCAGAGATCTCAGGTTCAGGAGTACATGTGAAGTCAACTC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669619.1 |
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| CDS TCA 72 bp | GAGGATATGTGGGTCCAGAGCACTGATATAGGGCTGTaGTTCAGATTATGCCTTTGGTCATTGGTCATCATT | + |
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Preference number: 6 (lower is better) Translates to: EDMWVQSTDIGL*FRLCLWSLVII Trigger: AATGATGACCAATGACCAAAGGCATAATCTGAATCACAGCCCTATATCAGTGCTCTGGACCCACATATCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS CCA 72 bp | ACTAGAACAGGTTTCCAGGAATACCCCACACTCATATaGCTGTTCCAGTCTTCAATTGGCATCTTAGACACA | + |
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Preference number: 6 (lower is better) Translates to: TRTGFQEYPTLI*LFQSSIGILDT Trigger: TGTGTCTAAGATGCCAATTGAAGACTGGAACAGCCATATGAGTGTGGGGTATTCCTGGAAACCTGTTCTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000513039.3 ENST00000669275.1 |
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| CDS CAA 72 bp | ACAGTGGATGCATTCCCACTGCAGAAGACGAAATTCTaGTCAGATCCCAAAGGAAAAATGGGAATTGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: TVDAFPLQKTKF*SDPKGKMGIVA Trigger: AGCCACAATTCCCATTTTTCCTTTGGGATCTGACAAGAATTTCGTCTTCTGCAGTGGGAATGCATCCACTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669275.1 |
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| CDS CCA 72 bp | GGTTTGTTAAAGGGTATATTGTGTGATGCTGAGGTTTaGAGTACAATTGAACCCATCACCCAGGTATTGAGC | + |
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Preference number: 6 (lower is better) Translates to: GLLKGILCDAEV*STIEPITQVLS Trigger: GCTCAATACCTGGGTGATGGGTTCAATTGTACTCCAAACCTCAGCATCACACAATATACCCTTTAACAAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508853.1 |
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| CDS CAA 90 bp | CTTGATTGTGGCTCAGCTGTATCGTCACCCCTGCTCTCTTGGCTGTaGTTTACAGAACTCAAATTGGAAGATAAGCATATTCCTTATCTT | + |
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Preference number: 6 (lower is better) Translates to: LDCGSAVSSPLLSWL*FTELKLEDKHIPYL Trigger: AAGATAAGGAATATGCTTATCTTCCAATTTGAGTTCTGTAAACAACAGCCAAGAGAGCAGGGGTGACGATACAGCTGAGCCACAATCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS CCA 72 bp | TTTTATGTAATTTGCTTGGAGCAGACAGGGCCTCATTaGGCATCACCAACAGTCAAGTTAAACAAGCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: FYVICLEQTGPH*ASPTVKLNKQE Trigger: TTCTTGCTTGTTTAACTTGACTGTTGGTGATGCCCAATGAGGCCCTGTCTGCTCCAAGCAAATTACATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000513039.3 ENST00000652286.1 ENST00000662564.1 ENST00000666505.1 ENST00000669275.1 ENST00000669619.1 ENST00000671526.1 |
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| CDS CAA 72 bp | CATCATTGTCTTCAAACTGCATATTATGAACACCAATaGTATTGGGGACTGTTAGGTATGGAGGGGAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: HHCLQTAYYEHQ*YWGLLGMEGKA Trigger: AGCCTTCCCCTCCATACCTAACAGTCCCCAATACAATTGGTGTTCATAATATGCAGTTTGAAGACAATGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS CAA 72 bp | TCACATGTACTCCTGAACCTGAGATCTCTGACATTATaGCCATCCTGGTTGAATCATCTTCAACATCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: SHVLLNLRSLTL*PSWLNHLQHPR Trigger: TCTTGGATGTTGAAGATGATTCAACCAGGATGGCAATAATGTCAGAGATCTCAGGTTCAGGAGTACATGTGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669619.1 |
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| CDS CAA 90 bp | TGTGATGCTGAGGTTTGGAGTACAATTGAACCCATCACCCAGGTATaGAGCTTACTGAGAGTAAACTTCCCAATAGGAAGTTTTTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: CDAEVWSTIEPITQV*SLLRVNFPIGSFSN Trigger: GTTTGAAAAACTTCCTATTGGGAAGTTTACTCTCAGTAAGCTCAATACCTGGGTGATGGGTTCAATTGTACTCCAAACCTCAGCATCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508853.1 |
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| CDS CAA 90 bp | GAGGTGCCTGTGTCCTTTGATACAAGCTCATACATACATGTTAAATaGCTAATAGAAGAGGTGCTTATATGCCAGGATACAAGAGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: EVPVSFDTSSYIHVK*LIEEVLICQDTRGA Trigger: AGCACCTCTTGTATCCTGGCATATAAGCACCTCTTCTATTAGCAATTTAACATGTATGTATGAGCTTGTATCAAAGGACACAGGCACCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669275.1 |
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| CDS CAA 90 bp | ACGAAATTCTTGTCAGATCCCAAAGGAAAAATGGGAATTGTGGCTTaGGAATTGAGATACAGTTCATACAATATCCAAGAGGTAGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: TKFLSDPKGKMGIVA*ELRYSSYNIQEVEG Trigger: CCCCTCTACCTCTTGGATATTGTATGAACTGTATCTCAATTCCAAAGCCACAATTCCCATTTTTCCTTTGGGATCTGACAAGAATTTCGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669275.1 |
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| CDS CAA 90 bp | CTAGTCCTAATTAGTGTAAGTTGCCACTATTGTCACTATAGGTTGTaGTCCCAGCTACAGTCAGATCGTGTTGGTTTACAAAGTGTAATG | + |
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Preference number: 6 (lower is better) Translates to: LVLISVSCHYCHYRL*SQLQSDRVGLQSVM Trigger: CATTACACTTTGTAAACCAACACGATCTGACTGTAGCTGGGACAACAACCTATAGTGACAATAGTGGCAACTTACACTAATTAGGACTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669275.1 |
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| CDS CAA 90 bp | TCTCTAGTCCTAATTAGTGTAAGTTGCCACTATTGTCACTATAGGTaGTTGTCCCAGCTACAGTCAGATCGTGTTGGTTTACAAAGTGTA | + |
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Preference number: 6 (lower is better) Translates to: SLVLISVSCHYCHYR*LSQLQSDRVGLQSV Trigger: TACACTTTGTAAACCAACACGATCTGACTGTAGCTGGGACAACAACCTATAGTGACAATAGTGGCAACTTACACTAATTAGGACTAGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669275.1 |
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| CDS TCA 72 bp | TACCGTCTTCAGACTTCTATTGCTATATCTTGGGAATaGAAGGAAGAAAGGATGTGGACTGGAATCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: YRLQTSIAISWE*KEERMWTGIFC Trigger: ACAGAAGATTCCAGTCCACATCCTTTCTTCCTTTCATTCCCAAGATATAGCAATAGAAGTCTGAAGACGGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS TCA 72 bp | ACTTGGAGCAGAGTGTTCACTGAAGAAGATTGGCAATaGAGAGGCAAAAAGCCTATTGTGTTAATTCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: TWSRVFTEEDWQ*RGKKPIVLILA Trigger: AGCAAGAATTAACACAATAGGCTTTTTGCCTCTTCATTGCCAATCTTCTTCAGTGAACACTCTGCTCCAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669275.1 |
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| CDS GCA 72 bp | ATACATGTTAAATTGCTAATAGAAGAGGTGCTTATATaGCAGGATACAAGAGGTGCTGGGCGTAGGATGAAT | + |
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Preference number: 6 (lower is better) Translates to: IHVKLLIEEVLI*QDTRGAGRRMN Trigger: ATTCATCCTACGCCCAGCACCTCTTGTATCCTGGCATATAAGCACCTCTTCTATTAGCAATTTAACATGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669275.1 |
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| CDS CAA 72 bp | CTAATTAGTGTAAGTTGCCACTATTGTCACTATAGGTaGTTGTCCCAGCTACAGTCAGATCGTGTTGGTTTA | + |
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Preference number: 6 (lower is better) Translates to: LISVSCHYCHYR*LSQLQSDRVGL Trigger: TAAACCAACACGATCTGACTGTAGCTGGGACAACAACCTATAGTGACAATAGTGGCAACTTACACTAATTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669275.1 |
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| CDS CAA 90 bp | GTCATTGGTCATCATTGTCTTCAAACTGCATATTATGAACACCAATaGTATTGGGGACTGTTAGGTATGGAGGGGAAGGCTTGTTATTTT | + |
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Preference number: 6 (lower is better) Translates to: VIGHHCLQTAYYEHQ*YWGLLGMEGKACYF Trigger: AAAATAACAAGCCTTCCCCTCCATACCTAACAGTCCCCAATACAATTGGTGTTCATAATATGCAGTTTGAAGACAATGATGACCAATGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS TCA 72 bp | GGTCATTGGTCATCATTGTCTTCAAACTGCATATTATaGACACCAATTGTATTGGGGACTGTTAGGTATGGA | + |
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Preference number: 6 (lower is better) Translates to: GHWSSLSSNCIL*TPIVLGTVRYG Trigger: TCCATACCTAACAGTCCCCAATACAATTGGTGTTCATAATATGCAGTTTGAAGACAATGATGACCAATGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000508853.1 ENST00000652286.1 ENST00000666505.1 ENST00000671526.1 |
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| CDS TCA 72 bp | GATTTCTTTAACTACAACTTGGAGCAGAGTGTTCACTaGAGAAGATTGGCAATGAAGAGGCAAAAAGCCTAT | + |
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Preference number: 6 (lower is better) Translates to: DFFNYNLEQSVH*RRLAMKRQKAY Trigger: ATAGGCTTTTTGCCTCTTCATTGCCAATCTTCTTCAGTGAACACTCTGCTCCAAGTTGTAGTTAAAGAAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669275.1 |
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| CDS CAA 72 bp | GTGTCCTTTGATACAAGCTCATACATACATGTTAAATaGCTAATAGAAGAGGTGCTTATATGCCAGGATACA | + |
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Preference number: 6 (lower is better) Translates to: VSFDTSSYIHVK*LIEEVLICQDT Trigger: TGTATCCTGGCATATAAGCACCTCTTCTATTAGCAATTTAACATGTATGTATGAGCTTGTATCAAAGGACAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669275.1 |
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