Pregenerated sensors for LINC02114 (Homo sapiens)

Ensembl gene IDs: ENSG00000249521

Ensembl transcript IDs: ENST00000503757.1

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TCCACCATCCTGACTTTCACCATCATGAGGCATTCACACCACAGCTaGCTGTCAGTCTCCAGGTCGGCTTTCTTTCCATGCAATGTATCT	+
Preference number: 5 (lower is better) Translates to: STILTFTIMRHSHHS*LSVSRSAFFPCNVS Trigger: AGATACATTGCATGGAAAGAAAGCCGACCTGGAGACTGACAGGCAGCTGTGGTGTGAATGCCTCATGATGGTGAAAGTCAGGATGGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503757.1
CDS CCA 90 bp	TATTCCTTCAGTCTCTGTGATAAAACTGAGCTGAAAGCGAGCATTTaGGTCTACCATGGGGGAATATCACGGTCTCACAAATCTCTTTAC	+
Preference number: 5 (lower is better) Translates to: YSFSLCDKTELKASI*VYHGGISRSHKSLY Trigger: GTAAAGAGATTTGTGAGACCGTGATATTCCCCCATGGTAGACCCAAATGCTCGCTTTCAGCTCAGTTTTATCACAGAGACTGAAGGAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503757.1
CDS TCA 90 bp	AAAGCTAAAGATATTATTCCTTCAGTCTCTGTGATAAAACTGAGCTaGAAGCGAGCATTTGGGTCTACCATGGGGGAATATCACGGTCTC	+
Preference number: 5 (lower is better) Translates to: KAKDIIPSVSVIKLS*KRAFGSTMGEYHGL Trigger: GAGACCGTGATATTCCCCCATGGTAGACCCAAATGCTCGCTTTCAGCTCAGTTTTATCACAGAGACTGAAGGAATAATATCTTTAGCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503757.1
CDS GCA 90 bp	TTTAATCTGTTGAGACCACATTATCTGACTAAACAAGCTTCTACTTaGAGAAATGCACTGATGACCTCTCCTGTTCCAGAATTTCTCTAT	+
Preference number: 5 (lower is better) Translates to: FNLLRPHYLTKQAST*RNALMTSPVPEFLY Trigger: ATAGAGAAATTCTGGAACAGGAGAGGTCATCAGTGCATTTCTGCAAGTAGAAGCTTGTTTAGTCAGATAATGTGGTCTCAACAGATTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503757.1
CDS GCA 72 bp	CTGACTTTCACCATCATGAGGCATTCACACCACAGCTaGCTGTCAGTCTCCAGGTCGGCTTTCTTTCCATGC	+
Preference number: 6 (lower is better) Translates to: LTFTIMRHSHHS*LSVSRSAFFPC Trigger: GCATGGAAAGAAAGCCGACCTGGAGACTGACAGGCAGCTGTGGTGTGAATGCCTCATGATGGTGAAAGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503757.1
CDS CCA 72 bp	AGTCTCTGTGATAAAACTGAGCTGAAAGCGAGCATTTaGGTCTACCATGGGGGAATATCACGGTCTCACAAA	+
Preference number: 6 (lower is better) Translates to: SLCDKTELKASI*VYHGGISRSHK Trigger: TTTGTGAGACCGTGATATTCCCCCATGGTAGACCCAAATGCTCGCTTTCAGCTCAGTTTTATCACAGAGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503757.1
CDS CAA 72 bp	CTGCCAGTTGAACAGGCCAATTCTACACTATCTGGCTaGGTTTTGGTTCTTATTGTGCAGGTCATCATGATA	+
Preference number: 6 (lower is better) Translates to: LPVEQANSTLSG*VLVLIVQVIMI Trigger: TATCATGATGACCTGCACAATAAGAACCAAAACCAAGCCAGATAGTGTAGAATTGGCCTGTTCAACTGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503757.1
CDS GCA 72 bp	TTACACAAGGTAAATGTGCTGAATGTGGTCCACACTTaGATATGCATATTGCCCAATAATGTTCATAACTGC	+
Preference number: 6 (lower is better) Translates to: LHKVNVLNVVHT*ICILPNNVHNC Trigger: GCAGTTATGAACATTATTGGGCAATATGCATATGCAAGTGTGGACCACATTCAGCACATTTACCTTGTGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503757.1
CDS CAA 90 bp	TTATTAATACTGCCAGTTGAACAGGCCAATTCTACACTATCTGGCTaGGTTTTGGTTCTTATTGTGCAGGTCATCATGATAATAAACAAA	+
Preference number: 6 (lower is better) Translates to: LLILPVEQANSTLSG*VLVLIVQVIMIINK Trigger: TTTGTTTATTATCATGATGACCTGCACAATAAGAACCAAAACCAAGCCAGATAGTGTAGAATTGGCCTGTTCAACTGGCAGTATTAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503757.1

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