Pregenerated sensors for LINC02112 (Homo sapiens)
Ensembl gene IDs: ENSG00000249781Ensembl transcript IDs: ENST00000511616.5, ENST00000512976.5, ENST00000606169.1, ENST00000606222.1, ENST00000606744.1, ENST00000660091.1
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTCCCACACCGCAAGGTCTTCTATCGGTTTGAGAGCCCCTGGAGATaGCCCACGCTGGTGGCAACGAGGCATAGAGAGTCACACGAGATC | + |
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Preference number: 5 (lower is better) Translates to: FPHRKVFYRFESPWR*PTLVATRHRESHEI Trigger: GATCTCGTGTGACTCTCTATGCCTCGTTGCCACCAGCGTGGGCCATCTCCAGGGGCTCTCAAACCGATAGAAGACCTTGCGGTGTGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 90 bp | GCTGTTTTCCCACACCGCAAGGTCTTCTATCGGTTTGAGAGCCCCTaGAGATGGCCCACGCTGGTGGCAACGAGGCATAGAGAGTCACAC | + |
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Preference number: 5 (lower is better) Translates to: AVFPHRKVFYRFESP*RWPTLVATRHRESH Trigger: GTGTGACTCTCTATGCCTCGTTGCCACCAGCGTGGGCCATCTCCAGGGGCTCTCAAACCGATAGAAGACCTTGCGGTGTGGGAAAACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 90 bp | AGGTCTTCTATCGGTTTGAGAGCCCCTGGAGATGGCCCACGCTGGTaGCAACGAGGCATAGAGAGTCACACGAGATCACTTAGCTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: RSSIGLRAPGDGPRW*QRGIESHTRSLSSP Trigger: TGGGGAGCTAAGTGATCTCGTGTGACTCTCTATGCCTCGTTGCCACCAGCGTGGGCCATCTCCAGGGGCTCTCAAACCGATAGAAGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 90 bp | GCAAGGTCTTCTATCGGTTTGAGAGCCCCTGGAGATGGCCCACGCTaGTGGCAACGAGGCATAGAGAGTCACACGAGATCACTTAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: ARSSIGLRAPGDGPR*WQRGIESHTRSLSS Trigger: GGAGCTAAGTGATCTCGTGTGACTCTCTATGCCTCGTTGCCACCAGCGTGGGCCATCTCCAGGGGCTCTCAAACCGATAGAAGACCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS GCA 90 bp | CTCAGCGTGGACAGGTCAGGCTCTGGGCTGGTACTGGAGAATGTCTaGAAGGAGTCCTGTGATGTGATCCATCTTCAGGTCTCTCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: LSVDRSGSGLVLENV*KESCDVIHLQVSQL Trigger: CAGCTGAGAGACCTGAAGATGGATCACATCACAGGACTCCTTGCAGACATTCTCCAGTACCAGCCCAGAGCCTGACCTGTCCACGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660091.1 |
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| CDS GCA 90 bp | TGGGGTATGGTGCCCAGTAGTTTGGTCAAACACCAGTCTAGATGTTaGTTGCCCAGGAAGCTCCCCGTGACCACGCAGACTGGGATATAT | + |
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Preference number: 5 (lower is better) Translates to: WGMVPSSLVKHQSRC*LPRKLPVTTQTGIY Trigger: ATATATCCCAGTCTGCGTGGTCACGGGGAGCTTCCTGGGCAAGCAACATCTAGACTGGTGTTTGACCAAACTACTGGGCACCATACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS TCA 90 bp | TTAGCTCCCCAGTCAGGTCTACTCCCTGAGCCCCGAGCTCACCAGTaGGTCCCTCAAGACTGGGTAATGAATAACACCAAGCATTCATCT | + |
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Preference number: 5 (lower is better) Translates to: LAPQSGLLPEPRAHQ*VPQDWVMNNTKHSS Trigger: AGATGAATGCTTGGTGTTATTCATTACCCAGTCTTGAGGGACTCACTGGTGAGCTCGGGGCTCAGGGAGTAGACCTGACTGGGGAGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS GCA 90 bp | CCTTTAGGCATCAGTGTTTATTATCCCAGGTCTACAGGGCAGTGGTaGTTCATAGGCACAGTCCAGGTTCTCTGGAATCCAGCCCAGACC | + |
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Preference number: 5 (lower is better) Translates to: PLGISVYYPRSTGQW*FIGTVQVLWNPAQT Trigger: GGTCTGGGCTGGATTCCAGAGAACCTGGACTGTGCCTATGAAGCACCACTGCCCTGTAGACCTGGGATAATAAACACTGATGCCTAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 90 bp | TCTTTAGCGCCCACCACCATCTGGAAGATGCCTTCCAGTGCAGTTTaGGACTCTCCCCTTGATGGATACCAGATGGCACAGAAAGTCCTA | + |
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Preference number: 5 (lower is better) Translates to: SLAPTTIWKMPSSAV*DSPLDGYQMAQKVL Trigger: TAGGACTTTCTGTGCCATCTGGTATCCATCAAGGGGAGAGTCCCAAACTGCACTGGAAGGCATCTTCCAGATGGTGGTGGGCGCTAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 90 bp | AGGTCTACAGGGCAGTGGTGCTTCATAGGCACAGTCCAGGTTCTCTaGAATCCAGCCCAGACCACCAATTCTTGCTGTCTTACCACTTTG | + |
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Preference number: 5 (lower is better) Translates to: RSTGQWCFIGTVQVL*NPAQTTNSCCLTTL Trigger: CAAAGTGGTAAGACAGCAAGAATTGGTGGTCTGGGCTGGATTCCAGAGAACCTGGACTGTGCCTATGAAGCACCACTGCCCTGTAGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 90 bp | GTCCCTTTAGGCATCAGTGTTTATTATCCCAGGTCTACAGGGCAGTaGTGCTTCATAGGCACAGTCCAGGTTCTCTGGAATCCAGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: VPLGISVYYPRSTGQ*CFIGTVQVLWNPAQ Trigger: CTGGGCTGGATTCCAGAGAACCTGGACTGTGCCTATGAAGCACCACTGCCCTGTAGACCTGGGATAATAAACACTGATGCCTAAAGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 90 bp | TATTGGTACTTTCATCCACATTCACAGCTTCCAACACCTCAGTTCTaGAGGCTAGGCAGTCCAGAGGCACAGCACCTGCATCTGTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: YWYFHPHSQLPTPQF*RLGSPEAQHLHLFS Trigger: GCTGAACAGATGCAGGTGCTGTGCCTCTGGACTGCCTAGCCTCCAGAACTGAGGTGTTGGAAGCTGTGAATGTGGATGAAAGTACCAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000606169.1 ENST00000660091.1 |
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| CDS TCA 90 bp | CCACTTTGTGACATGTCTCCCACTGTGATGGTTCACATTATATGCTaGCTTGGCTGGGGTATGGTGCCCAGTAGTTTGGTCAAACACCAG | + |
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Preference number: 5 (lower is better) Translates to: PLCDMSPTVMVHIIC*LGWGMVPSSLVKHQ Trigger: CTGGTGTTTGACCAAACTACTGGGCACCATACCCCAGCCAAGTCAGCATATAATGTGAACCATCACAGTGGGAGACATGTCACAAAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 90 bp | TTCTTACCCTGTCAGTCAGTGGCTTGGAACGTTGACAGTTTTACATaGACAAATAGCTTGGAACAGATGGGACAAGACCTGCCTGGTCCC | + |
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Preference number: 5 (lower is better) Translates to: FLPCQSVAWNVDSFT*TNSLEQMGQDLPGP Trigger: GGGACCAGGCAGGTCTTGTCCCATCTGTTCCAAGCTATTTGTCCATGTAAAACTGTCAACGTTCCAAGCCACTGACTGACAGGGTAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606744.1 |
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| CDS TCA 90 bp | AAAGATCTTGACATGGCTGGCTCCAGCTCTACCCCACCTCTAGCTTaGGAGTCTTTTTCTTGTACACTTCCAGTAGCCAACAGGTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: KDLDMAGSSSTPPLA*ESFSCTLPVANRFQ Trigger: CTGAAACCTGTTGGCTACTGGAAGTGTACAAGAAAAAGACTCTCAAGCTAGAGGTGGGGTAGAGCTGGAGCCAGCCATGTCAAGATCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000606169.1 ENST00000606222.1 ENST00000660091.1 |
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| CDS GCA 90 bp | CCACGCAGACTGGGATATATTTTTCTCCCCGATGACGCTCGTTTGTaGAGATCCCTCTCAACCCACACATTAAGTTGGAACATGACAACT | + |
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Preference number: 5 (lower is better) Translates to: PRRLGYIFLPDDARL*RSLSTHTLSWNMTT Trigger: AGTTGTCATGTTCCAACTTAATGTGTGGGTTGAGAGGGATCTGCACAAACGAGCGTCATCGGGGAGAAAAATATATCCCAGTCTGCGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 90 bp | AGTCAGTGGCTTGGAACGTTGACAGTTTTACATGGACAAATAGCTTaGAACAGATGGGACAAGACCTGCCTGGTCCCTTTAGGCATCAGT | + |
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Preference number: 5 (lower is better) Translates to: SQWLGTLTVLHGQIA*NRWDKTCLVPLGIS Trigger: ACTGATGCCTAAAGGGACCAGGCAGGTCTTGTCCCATCTGTTCCAAGCTATTTGTCCATGTAAAACTGTCAACGTTCCAAGCCACTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606744.1 |
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| CDS CCA 90 bp | TTCTTACCCTGTCAGTCAGTGGCTTGGAACGTTGACAGTTTTACATaGACAAATAGCTTGGAACAGATGGGACAAGACTTGGGGCTGACT | + |
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Preference number: 5 (lower is better) Translates to: FLPCQSVAWNVDSFT*TNSLEQMGQDLGLT Trigger: AGTCAGCCCCAAGTCTTGTCCCATCTGTTCCAAGCTATTTGTCCATGTAAAACTGTCAACGTTCCAAGCCACTGACTGACAGGGTAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512976.5 |
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| CDS GCA 90 bp | TACATAATTTCTGTCACTGTCTCTTCCATGGGCACACACAGAGTCTaGCAAAGATTCACCGTTCCTCACTCTCTTGAGACTCACTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: YIISVTVSSMGTHRV*QRFTVPHSLETHSS Trigger: AGAAGAGTGAGTCTCAAGAGAGTGAGGAACGGTGAATCTTTGGCAGACTCTGTGTGTGCCCATGGAAGAGACAGTGACAGAAATTATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000511616.5 ENST00000512976.5 ENST00000606744.1 |
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| CDS CCA 90 bp | CTGACTCCATCACTGAATCCAGGAGTAGTCACAGAAACCCAGGTGTaGCAGTCAACATATCCATTCACCCCAAATGACTTGCTATTGATA | + |
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Preference number: 5 (lower is better) Translates to: LTPSLNPGVVTETQV*QSTYPFTPNDLLLI Trigger: TATCAATAGCAAGTCATTTGGGGTGAATGGATATGTTGACTGCCACACCTGGGTTTCTGTGACTACTCCTGGATTCAGTGATGGAGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512976.5 |
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| CDS GCA 90 bp | ACAGTTTTACATGGACAAATAGCTTGGAACAGATGGGACAAGACCTaGCTGGTCCCTTTAGGCATCAGTGTTTATTATCCCAGGTCTACA | + |
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Preference number: 5 (lower is better) Translates to: TVLHGQIAWNRWDKT*LVPLGISVYYPRST Trigger: TGTAGACCTGGGATAATAAACACTGATGCCTAAAGGGACCAGGCAGGTCTTGTCCCATCTGTTCCAAGCTATTTGTCCATGTAAAACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606744.1 |
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| CDS GCA 90 bp | TCTCCCCTTGATGGATACCAGATGGCACAGAAAGTCCTAAAGACATaGTTCATACTGTGTAACAAAGCTGCACATCCTGCATATGTATCA | + |
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Preference number: 5 (lower is better) Translates to: SPLDGYQMAQKVLKT*FILCNKAAHPAYVS Trigger: TGATACATATGCAGGATGTGCAGCTTTGTTACACAGTATGAAGCATGTCTTTAGGACTTTCTGTGCCATCTGGTATCCATCAAGGGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS TCA 90 bp | GTGGACAGGTCTTTGTGTTCTCATAGCTTAGCTCCTACTGATGAGTaGGAACAGATGATGTTTGGTTTTCCATTTCCGAGTTACTTCACT | + |
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Preference number: 5 (lower is better) Translates to: VDRSLCSHSLAPTDE*EQMMFGFPFPSYFT Trigger: AGTGAAGTAACTCGGAAATGGAAAACCAAACATCATCTGTTCTCACTCATCAGTAGGAGCTAAGCTATGAGAACACAAAGACCTGTCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 90 bp | GCTCACAGCAAATGCCTCCTACAGTATCTTCCTCATGTGCACAAATaGCTTTATGTCAGAAATCAACATCCACTGAGACACCAGAAATTT | + |
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Preference number: 5 (lower is better) Translates to: AHSKCLLQYLPHVHK*LYVRNQHPLRHQKF Trigger: AAATTTCTGGTGTCTCAGTGGATGTTGATTTCTGACATAAAGCCATTTGTGCACATGAGGAAGATACTGTAGGAGGCATTTGCTGTGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 72 bp | CCACACCGCAAGGTCTTCTATCGGTTTGAGAGCCCCTaGAGATGGCCCACGCTGGTGGCAACGAGGCATAGA | + |
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Preference number: 6 (lower is better) Translates to: PHRKVFYRFESP*RWPTLVATRHR Trigger: TCTATGCCTCGTTGCCACCAGCGTGGGCCATCTCCAGGGGCTCTCAAACCGATAGAAGACCTTGCGGTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CAA 90 bp | GAAGCTCTGGAGCTGTTTTCCCACACCGCAAGGTCTTCTATCGGTTaGAGAGCCCCTGGAGATGGCCCACGCTGGTGGCAACGAGGCATA | + |
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Preference number: 6 (lower is better) Translates to: EALELFSHTARSSIG*RAPGDGPRWWQRGI Trigger: TATGCCTCGTTGCCACCAGCGTGGGCCATCTCCAGGGGCTCTCAAACCGATAGAAGACCTTGCGGTGTGGGAAAACAGCTCCAGAGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 72 bp | CGCAAGGTCTTCTATCGGTTTGAGAGCCCCTGGAGATaGCCCACGCTGGTGGCAACGAGGCATAGAGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: RKVFYRFESPWR*PTLVATRHRES Trigger: TGACTCTCTATGCCTCGTTGCCACCAGCGTGGGCCATCTCCAGGGGCTCTCAAACCGATAGAAGACCTTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CAA 72 bp | GAGCTGTTTTCCCACACCGCAAGGTCTTCTATCGGTTaGAGAGCCCCTGGAGATGGCCCACGCTGGTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: ELFSHTARSSIG*RAPGDGPRWWQ Trigger: TTGCCACCAGCGTGGGCCATCTCCAGGGGCTCTCAAACCGATAGAAGACCTTGCGGTGTGGGAAAACAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 72 bp | GGTCTAGCCACCCAACAGACCTACCAGGCTCTGGGCTaGTACTGGAGAATGTCTGCAAGGAGTCCTGTGATG | + |
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Preference number: 6 (lower is better) Translates to: GLATQQTYQALG*YWRMSARSPVM Trigger: CATCACAGGACTCCTTGCAGACATTCTCCAGTACCAGCCCAGAGCCTGGTAGGTCTGTTGGGTGGCTAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 72 bp | ATCGGTTTGAGAGCCCCTGGAGATGGCCCACGCTGGTaGCAACGAGGCATAGAGAGTCACACGAGATCACTT | + |
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Preference number: 6 (lower is better) Translates to: IGLRAPGDGPRW*QRGIESHTRSL Trigger: AAGTGATCTCGTGTGACTCTCTATGCCTCGTTGCCACCAGCGTGGGCCATCTCCAGGGGCTCTCAAACCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 72 bp | TCTATCGGTTTGAGAGCCCCTGGAGATGGCCCACGCTaGTGGCAACGAGGCATAGAGAGTCACACGAGATCA | + |
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Preference number: 6 (lower is better) Translates to: SIGLRAPGDGPR*WQRGIESHTRS Trigger: TGATCTCGTGTGACTCTCTATGCCTCGTTGCCACCAGCGTGGGCCATCTCCAGGGGCTCTCAAACCGATAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CAA 72 bp | CCCAGTAGTTTGGTCAAACACCAGTCTAGATGTTGCTaGCCCAGGAAGCTCCCCGTGACCACGCAGACTGGG | + |
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Preference number: 6 (lower is better) Translates to: PSSLVKHQSRCC*PRKLPVTTQTG Trigger: CCCAGTCTGCGTGGTCACGGGGAGCTTCCTGGGCAAGCAACATCTAGACTGGTGTTTGACCAAACTACTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS GCA 72 bp | CCATCTTCAGGTCTCTCAGCTGTGGATACCAGCACCTaGTCTGGTGGAGGGGAGTTAAGTGGACTCTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: PSSGLSAVDTST*SGGGELSGLCK Trigger: CTTGCAGAGTCCACTTAACTCCCCTCCACCAGAGCAGGTGCTGGTATCCACAGCTGAGAGACCTGAAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511616.5 ENST00000660091.1 |
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| CDS GCA 72 bp | GTGCCCAGTAGTTTGGTCAAACACCAGTCTAGATGTTaGTTGCCCAGGAAGCTCCCCGTGACCACGCAGACT | + |
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Preference number: 6 (lower is better) Translates to: VPSSLVKHQSRC*LPRKLPVTTQT Trigger: AGTCTGCGTGGTCACGGGGAGCTTCCTGGGCAAGCAACATCTAGACTGGTGTTTGACCAAACTACTGGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 72 bp | AGGTCTCTCAGCTGTGGATACCAGCACCTGCTCTGGTaGAGGGGAGTTAAGTGGACTCTGCAAGGGTCATTG | + |
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Preference number: 6 (lower is better) Translates to: RSLSCGYQHLLW*RGVKWTLQGSL Trigger: CAATGACCCTTGCAGAGTCCACTTAACTCCCCTCCACCAGAGCAGGTGCTGGTATCCACAGCTGAGAGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511616.5 ENST00000660091.1 |
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| CDS CCA 72 bp | CCCACCACCATCTGGAAGATGCCTTCCAGTGCAGTTTaGGACTCTCCCCTTGATGGATACCAGATGGCACAG | + |
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Preference number: 6 (lower is better) Translates to: PTTIWKMPSSAV*DSPLDGYQMAQ Trigger: CTGTGCCATCTGGTATCCATCAAGGGGAGAGTCCCAAACTGCACTGGAAGGCATCTTCCAGATGGTGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS TCA 72 bp | CAGTCAGGTCTACTCCCTGAGCCCCGAGCTCACCAGTaGGTCCCTCAAGACTGGGTAATGAATAACACCAAG | + |
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Preference number: 6 (lower is better) Translates to: QSGLLPEPRAHQ*VPQDWVMNNTK Trigger: CTTGGTGTTATTCATTACCCAGTCTTGAGGGACTCACTGGTGAGCTCGGGGCTCAGGGAGTAGACCTGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS GCA 72 bp | GACCTACCAGGCTCTGGGCTGGTACTGGAGAATGTCTaGAAGGAGTCCTGTGATGTGATCCATCTTCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: DLPGSGLVLENV*KESCDVIHLQV Trigger: GACCTGAAGATGGATCACATCACAGGACTCCTTGCAGACATTCTCCAGTACCAGCCCAGAGCCTGGTAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 72 bp | GCTATAAACTCAGCGTGGACAGGTCAGGCTCTGGGCTaGTACTGGAGAATGTCTGCAAGGAGTCCTGTGATG | + |
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Preference number: 6 (lower is better) Translates to: AINSAWTGQALG*YWRMSARSPVM Trigger: CATCACAGGACTCCTTGCAGACATTCTCCAGTACCAGCCCAGAGCCTGACCTGTCCACGCTGAGTTTATAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660091.1 |
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| CDS TCA 72 bp | GTGACCACGCAGACTGGGATATATTTTTCTCCCCGATaGCGCTCGTTTGTGCAGATCCCTCTCAACCCACAC | + |
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Preference number: 6 (lower is better) Translates to: VTTQTGIYFSPR*RSFVQIPLNPH Trigger: GTGTGGGTTGAGAGGGATCTGCACAAACGAGCGTCATCGGGGAGAAAAATATATCCCAGTCTGCGTGGTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 72 bp | TTTCATCCACATTCACAGCTTCCAACACCTCAGTTCTaGAGGCTAGGCAGTCCAGAGGCACAGCACCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: FHPHSQLPTPQF*RLGSPEAQHLH Trigger: ATGCAGGTGCTGTGCCTCTGGACTGCCTAGCCTCCAGAACTGAGGTGTTGGAAGCTGTGAATGTGGATGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000606169.1 ENST00000660091.1 |
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| CDS CAA 90 bp | GCACAGCACCTGCATCTGTTCAGCCATCTTGTGAGGACCTTCCTGTaGCATCTTCCTGGAGCAGAAATCCATGAGCAGAAGCCTCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: AQHLHLFSHLVRTFL*HLPGAEIHEQKPLW Trigger: CCAAAGAGGCTTCTGCTCATGGATTTCTGCTCCAGGAAGATGCAACAGGAAGGTCCTCACAAGATGGCTGAACAGATGCAGGTGCTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000511616.5 ENST00000660091.1 |
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| CDS CAA 90 bp | GGTATGGTGCCCAGTAGTTTGGTCAAACACCAGTCTAGATGTTGCTaGCCCAGGAAGCTCCCCGTGACCACGCAGACTGGGATATATTTT | + |
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Preference number: 6 (lower is better) Translates to: GMVPSSLVKHQSRCC*PRKLPVTTQTGIYF Trigger: AAAATATATCCCAGTCTGCGTGGTCACGGGGAGCTTCCTGGGCAAGCAACATCTAGACTGGTGTTTGACCAAACTACTGGGCACCATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS TCA 72 bp | CAGAGGCACAGCACCTGCATCTGTTCAGCCATCTTGTaGGGACCTTCCTGTTGCATTGGAGCAGAAATCCAT | + |
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Preference number: 6 (lower is better) Translates to: QRHSTCICSAIL*GPSCCIGAEIH Trigger: ATGGATTTCTGCTCCAATGCAACAGGAAGGTCCTCACAAGATGGCTGAACAGATGCAGGTGCTGTGCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606169.1 |
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| CDS CAA 72 bp | CCAGGTTCTCTGGAATCCAGCCCAGACCACCAATTCTaGCTGTCTTACCACTTTGTGACATGTCTCCCACTG | + |
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Preference number: 6 (lower is better) Translates to: PGSLESSPDHQF*LSYHFVTCLPL Trigger: CAGTGGGAGACATGTCACAAAGTGGTAAGACAGCAAGAATTGGTGGTCTGGGCTGGATTCCAGAGAACCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS TCA 72 bp | CAGAGTCTGCCAAAGATTCACCGTTCCTCACTCTCTTaGGACTCACTCTTCTTACCCTGTCAGTCAGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: QSLPKIHRSSLS*DSLFLPCQSVA Trigger: AGCCACTGACTGACAGGGTAAGAAGAGTGAGTCTCAAGAGAGTGAGGAACGGTGAATCTTTGGCAGACTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000511616.5 ENST00000512976.5 ENST00000606744.1 |
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| CDS GCA 72 bp | CCACGAAACTTCATTCCAGATGAGCAATTCAATTGCTaGTTCTCCACAGGCATGGGAAGCTCACACCCACAC | + |
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Preference number: 6 (lower is better) Translates to: PRNFIPDEQFNC*FSTGMGSSHPH Trigger: GTGTGGGTGTGAGCTTCCCATGCCTGTGGAGAAGCAGCAATTGAATTGCTCATCTGGAATGAAGTTTCGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 72 bp | GGCATCAGTGTTTATTATCCCAGGTCTACAGGGCAGTaGTGCTTCATAGGCACAGTCCAGGTTCTCTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: GISVYYPRSTGQ*CFIGTVQVLWN Trigger: ATTCCAGAGAACCTGGACTGTGCCTATGAAGCACCACTGCCCTGTAGACCTGGGATAATAAACACTGATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CAA 72 bp | CTGCATCTGTTCAGCCATCTTGTGAGGACCTTCCTGTaGCATCTTCCTGGAGCAGAAATCCATGAGCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: LHLFSHLVRTFL*HLPGAEIHEQK Trigger: CTTCTGCTCATGGATTTCTGCTCCAGGAAGATGCAACAGGAAGGTCCTCACAAGATGGCTGAACAGATGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000511616.5 ENST00000660091.1 |
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| CDS CAA 72 bp | ACAGAGTCTGCCAAAGATTCACCGTTCCTCACTCTCTaGAGACTCACTCTTCTTACCCTGTCAGTCAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: TESAKDSPFLTL*RLTLLTLSVSG Trigger: GCCACTGACTGACAGGGTAAGAAGAGTGAGTCTCAAGAGAGTGAGGAACGGTGAATCTTTGGCAGACTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000511616.5 ENST00000512976.5 ENST00000606744.1 |
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| CDS CAA 90 bp | GGCTGGCTCCAGCTCTACCCCACCTCTAGCTTGAGAGTCTTTTTCTaGTACACTTCCAGTAGCCAACAGGTTTCAGAGCTTTGTATTCCA | + |
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Preference number: 6 (lower is better) Translates to: GWLQLYPTSSLRVFF*YTSSSQQVSELCIP Trigger: TGGAATACAAAGCTCTGAAACCTGTTGGCTACTGGAAGTGTACAAGAAAAAGACTCTCAAGCTAGAGGTGGGGTAGAGCTGGAGCCAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000606169.1 ENST00000606222.1 ENST00000660091.1 |
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| CDS CAA 90 bp | CAGTCAGTGGCTTGGAACGTTGACAGTTTTACATGGACAAATAGCTaGGAACAGATGGGACAAGACCTGCCTGGTCCCTTTAGGCATCAG | + |
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Preference number: 6 (lower is better) Translates to: QSVAWNVDSFTWTNS*EQMGQDLPGPFRHQ Trigger: CTGATGCCTAAAGGGACCAGGCAGGTCTTGTCCCATCTGTTCCAAGCTATTTGTCCATGTAAAACTGTCAACGTTCCAAGCCACTGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606744.1 |
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| CDS CCA 72 bp | TGGTTTTCCATTTCCGAGTTACTTCACTTAGAATACTaGTCTAGCCACCCAACAGACCTACCAGGCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: WFSISELLHLEY*SSHPTDLPGSG Trigger: CCCAGAGCCTGGTAGGTCTGTTGGGTGGCTAGACCAGTATTCTAAGTGAAGTAACTCGGAAATGGAAAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CAA 90 bp | GACAGTTTTACATGGACAAATAGCTTGGAACAGATGGGACAAGACTaGGGGCTGACTCCATCACTGAATCCAGGAGTAGTCACAGAAACC | + |
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Preference number: 6 (lower is better) Translates to: DSFTWTNSLEQMGQD*GLTPSLNPGVVTET Trigger: GGTTTCTGTGACTACTCCTGGATTCAGTGATGGAGTCAGCCCCAAGTCTTGTCCCATCTGTTCCAAGCTATTTGTCCATGTAAAACTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512976.5 |
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| CDS CAA 90 bp | CAGTCAGTGGCTTGGAACGTTGACAGTTTTACATGGACAAATAGCTaGGAACAGATGGGACAAGACTTGGGGCTGACTCCATCACTGAAT | + |
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Preference number: 6 (lower is better) Translates to: QSVAWNVDSFTWTNS*EQMGQDLGLTPSLN Trigger: ATTCAGTGATGGAGTCAGCCCCAAGTCTTGTCCCATCTGTTCCAAGCTATTTGTCCATGTAAAACTGTCAACGTTCCAAGCCACTGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512976.5 |
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| CDS GCA 72 bp | AATCCACGAAACTTCATTCCAGATGAGCAATTCAATTaGTGCTTCTCCACAGGCATGGGAAGCTCACACCCA | + |
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Preference number: 6 (lower is better) Translates to: NPRNFIPDEQFN*CFSTGMGSSHP Trigger: TGGGTGTGAGCTTCCCATGCCTGTGGAGAAGCAGCAATTGAATTGCTCATCTGGAATGAAGTTTCGTGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS GCA 72 bp | CTGGGATATATTTTTCTCCCCGATGACGCTCGTTTGTaGAGATCCCTCTCAACCCACACATTAAGTTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: LGYIFLPDDARL*RSLSTHTLSWN Trigger: GTTCCAACTTAATGTGTGGGTTGAGAGGGATCTGCACAAACGAGCGTCATCGGGGAGAAAAATATATCCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 72 bp | TCACTGAATCCAGGAGTAGTCACAGAAACCCAGGTGTaGCAGTCAACATATCCATTCACCCCAAATGACTTG | + |
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Preference number: 6 (lower is better) Translates to: SLNPGVVTETQV*QSTYPFTPNDL Trigger: CAAGTCATTTGGGGTGAATGGATATGTTGACTGCCACACCTGGGTTTCTGTGACTACTCCTGGATTCAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512976.5 |
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| CDS CAA 72 bp | AGACTGGGATATATTTTTCTCCCCGATGACGCTCGTTaGTGCAGATCCCTCTCAACCCACACATTAAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: RLGYIFLPDDAR*CRSLSTHTLSW Trigger: CCAACTTAATGTGTGGGTTGAGAGGGATCTGCACAAACGAGCGTCATCGGGGAGAAAAATATATCCCAGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CAA 72 bp | GCTTGGAACGTTGACAGTTTTACATGGACAAATAGCTaGGAACAGATGGGACAAGACTTGGGGCTGACTCCA | + |
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Preference number: 6 (lower is better) Translates to: AWNVDSFTWTNS*EQMGQDLGLTP Trigger: TGGAGTCAGCCCCAAGTCTTGTCCCATCTGTTCCAAGCTATTTGTCCATGTAAAACTGTCAACGTTCCAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512976.5 |
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| CDS CAA 72 bp | CAGCTCTACCCCACCTCTAGCTTGAGAGTCTTTTTCTaGTACACTTCCAGTAGCCAACAGGTTTCAGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: QLYPTSSLRVFF*YTSSSQQVSEL Trigger: AAGCTCTGAAACCTGTTGGCTACTGGAAGTGTACAAGAAAAAGACTCTCAAGCTAGAGGTGGGGTAGAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000606169.1 ENST00000606222.1 ENST00000660091.1 |
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| CDS CAA 72 bp | GCTTGGAACGTTGACAGTTTTACATGGACAAATAGCTaGGAACAGATGGGACAAGACCTGCCTGGTCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: AWNVDSFTWTNS*EQMGQDLPGPF Trigger: AAAGGGACCAGGCAGGTCTTGTCCCATCTGTTCCAAGCTATTTGTCCATGTAAAACTGTCAACGTTCCAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606744.1 |
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| CDS GCA 72 bp | TGGTTCACATTATATGCTGACTTGGCTGGGGTATGGTaGCCAGTAGTTTGGTCAAACACCAGTCTAGATGTT | + |
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Preference number: 6 (lower is better) Translates to: WFTLYADLAGVW*PVVWSNTSLDV Trigger: AACATCTAGACTGGTGTTTGACCAAACTACTGGGCACCATACCCCAGCCAAGTCAGCATATAATGTGAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 72 bp | TTGACAGTTTTACATGGACAAATAGCTTGGAACAGATaGGACAAGACCTGCCTGGTCCCTTTAGGCATCAGT | + |
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Preference number: 6 (lower is better) Translates to: LTVLHGQIAWNR*DKTCLVPLGIS Trigger: ACTGATGCCTAAAGGGACCAGGCAGGTCTTGTCCCATCTGTTCCAAGCTATTTGTCCATGTAAAACTGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606744.1 |
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| CDS CCA 72 bp | CTTGGAACGTTGACAGTTTTACATGGACAAATAGCTTaGAACAGATGGGACAAGACCTGCCTGGTCCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: LGTLTVLHGQIA*NRWDKTCLVPL Trigger: TAAAGGGACCAGGCAGGTCTTGTCCCATCTGTTCCAAGCTATTTGTCCATGTAAAACTGTCAACGTTCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606744.1 |
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| CDS CAA 72 bp | GGGTCATTGGTTATATTTTTGTTAAGTGTGCTGGTTTaGTGTTGTTTGGCCTCCAGCCAGACTCTCCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: GSLVIFLLSVLV*CCLASSQTLLG Trigger: CCCAAGGAGAGTCTGGCTGGAGGCCAAACAACACAAAACCAGCACACTTAACAAAAATATAACCAATGACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660091.1 |
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| CDS GCA 72 bp | GATGGATACCAGATGGCACAGAAAGTCCTAAAGACATaGTTCATACTGTGTAACAAAGCTGCACATCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: DGYQMAQKVLKT*FILCNKAAHPA Trigger: TGCAGGATGTGCAGCTTTGTTACACAGTATGAAGCATGTCTTTAGGACTTTCTGTGCCATCTGGTATCCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CAA 72 bp | CACTCTTCTTACCCTGTCAGTCAGTGGCTTGGAACGTaGACAGTTTTACATGGACAAATAGCTTGGAACAGA | + |
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Preference number: 6 (lower is better) Translates to: HSSYPVSQWLGT*TVLHGQIAWNR Trigger: TCTGTTCCAAGCTATTTGTCCATGTAAAACTGTCAACGTTCCAAGCCACTGACTGACAGGGTAAGAAGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000511616.5 ENST00000512976.5 ENST00000606744.1 |
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| CDS TCA 72 bp | CCAGGTGTGGCAGTCAACATATCCATTCACCCCAAATaGCTTGCTATTGATATGCTCGTATTTGGTAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: PGVAVNISIHPK*LAIDMLVFGSN Trigger: ATTGCTACCAAATACGAGCATATCAATAGCAAGTCATTTGGGGTGAATGGATATGTTGACTGCCACACCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512976.5 |
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| CDS GCA 72 bp | CTCACAGCAAATGCCTCCTACAGTATCTTCCTCATGTaGACAAATGGCTTTATGTCAGAAATCAACATCCAC | + |
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Preference number: 6 (lower is better) Translates to: LTANASYSIFLM*TNGFMSEINIH Trigger: GTGGATGTTGATTTCTGACATAAAGCCATTTGTGCACATGAGGAAGATACTGTAGGAGGCATTTGCTGTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CAA 72 bp | TGGGCTGTCTTCTATTCTCACTCTGTTCTCTCTATATaGGTACTTTCATCCACATTCACAGCTTCCAACACC | + |
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Preference number: 6 (lower is better) Translates to: WAVFYSHSVLSI*VLSSTFTASNT Trigger: GGTGTTGGAAGCTGTGAATGTGGATGAAAGTACCAATATAGAGAGAACAGAGTGAGAATAGAAGACAGCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000606169.1 ENST00000660091.1 |
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| CDS CCA 72 bp | AAATGCCTCCTACAGTATCTTCCTCATGTGCACAAATaGCTTTATGTCAGAAATCAACATCCACTGAGACAC | + |
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Preference number: 6 (lower is better) Translates to: KCLLQYLPHVHK*LYVRNQHPLRH Trigger: GTGTCTCAGTGGATGTTGATTTCTGACATAAAGCCATTTGTGCACATGAGGAAGATACTGTAGGAGGCATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS CCA 72 bp | CCAGAAGAGGAACCGTGTCTTATTGATCTTTCTGGTTaGTGGTTTATGGCTAAATGTCTGTTTCAGCTAAAG | + |
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Preference number: 6 (lower is better) Translates to: PEEEPCLIDLSG*WFMAKCLFQLK Trigger: CTTTAGCTGAAACAGACATTTAGCCATAAACCACCAACCAGAAAGATCAATAAGACACGGTTCCTCTTCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS TCA 72 bp | TCTTTGTGTTCTCATAGCTTAGCTCCTACTGATGAGTaGGAACAGATGATGTTTGGTTTTCCATTTCCGAGT | + |
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Preference number: 6 (lower is better) Translates to: SLCSHSLAPTDE*EQMMFGFPFPS Trigger: ACTCGGAAATGGAAAACCAAACATCATCTGTTCTCACTCATCAGTAGGAGCTAAGCTATGAGAACACAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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| CDS TCA 72 bp | TGCACAAATGGCTTTATGTCAGAAATCAACATCCACTaGGACACCAGAAATTTGAACAGGTCCCTAAAGACA | + |
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Preference number: 6 (lower is better) Translates to: CTNGFMSEINIH*DTRNLNRSLKT Trigger: TGTCTTTAGGGACCTGTTCAAATTTCTGGTGTCTCAGTGGATGTTGATTTCTGACATAAAGCCATTTGTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511616.5 |
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