Pregenerated sensors for LINC02111 (Homo sapiens)
Ensembl gene IDs: ENSG00000250822Ensembl transcript IDs: ENST00000505158.1
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTCGCACCTCTACCTTCTGCCACGTGTGCCTCTCCAGCTCGGTTATaGGGGAAGAACTGTTCCTCCTCTGCCAGGATGAACCATCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: FAPLPSATCASPARL*GKNCSSSARMNHLV Trigger: CACAAGATGGTTCATCCTGGCAGAGGAGGAACAGTTCTTCCCTCATAACCGAGCTGGAGAGGCACACGTGGCAGAAGGTAGAGGTGCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS TCA 90 bp | CTCCAGCTCGGTTATGAGGGAAGAACTGTTCCTCCTCTGCCAGGATaGACCATCTTGTGCATGCTTCGTATACTCCTTGGTTCTAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: LQLGYEGRTVPPLPG*TILCMLRILLGSRQ Trigger: CTGCCTAGAACCAAGGAGTATACGAAGCATGCACAAGATGGTTCATCCTGGCAGAGGAGGAACAGTTCTTCCCTCATAACCGAGCTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS GCA 90 bp | GTGTGCCTCTCCAGCTCGGTTATGAGGGAAGAACTGTTCCTCCTCTaGCAGGATGAACCATCTTGTGCATGCTTCGTATACTCCTTGGTT | + |
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Preference number: 5 (lower is better) Translates to: VCLSSSVMREELFLL*QDEPSCACFVYSLV Trigger: AACCAAGGAGTATACGAAGCATGCACAAGATGGTTCATCCTGGCAGAGGAGGAACAGTTCTTCCCTCATAACCGAGCTGGAGAGGCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS GCA 90 bp | AGGGAAGAACTGTTCCTCCTCTGCCAGGATGAACCATCTTGTGCATaGTTCGTATACTCCTTGGTTCTAGGCAGGCAGCTTCTGAATTGG | + |
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Preference number: 5 (lower is better) Translates to: REELFLLCQDEPSCA*FVYSLVLGRQLLNW Trigger: CCAATTCAGAAGCTGCCTGCCTAGAACCAAGGAGTATACGAAGCATGCACAAGATGGTTCATCCTGGCAGAGGAGGAACAGTTCTTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS CCA 90 bp | GCATGCTTCGTATACTCCTTGGTTCTAGGCAGGCAGCTTCTGAATTaGCCTTCAGCAATCCCCATCTCCTCCTATTTATGCCCTTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: ACFVYSLVLGRQLLN*PSAIPISSYLCPSA Trigger: TGCAGAAGGGCATAAATAGGAGGAGATGGGGATTGCTGAAGGCCAATTCAGAAGCTGCCTGCCTAGAACCAAGGAGTATACGAAGCATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS TCA 90 bp | GTTACTACCATCATCCTGAATGGAGGTGGAGCCCACTCAGAAGCTTaGCTAAAAGGAGAGTCACAGGCAGACATGGTATTACCCGTCTTA | + |
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Preference number: 5 (lower is better) Translates to: VTTIILNGGGAHSEA*LKGESQADMVLPVL Trigger: TAAGACGGGTAATACCATGTCTGCCTGTGACTCTCCTTTTAGTCAAGCTTCTGAGTGGGCTCCACCTCCATTCAGGATGATGGTAGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS CCA 90 bp | ACTTTTAAATTTGAATTCCCTGAGGTTTGGCTTAAAGCTTGGCTTTaGGCCAAGCTGCCATTAGGAGATTGTGCGGCTAACTCCAATACA | + |
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Preference number: 5 (lower is better) Translates to: TFKFEFPEVWLKAWL*AKLPLGDCAANSNT Trigger: TGTATTGGAGTTAGCCGCACAATCTCCTAATGGCAGCTTGGCCCAAAGCCAAGCTTTAAGCCAAACCTCAGGGAATTCAAATTTAAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS GCA 90 bp | CCAGTTCATCGTATTCATTCTGTTCTGATTCCAGTTTCACTAGGCTaGATACTGAAGCTAGCTCTTCCTTTCTTTTACAGGTATACACCC | + |
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Preference number: 5 (lower is better) Translates to: PVHRIHSVLIPVSLG*ILKLALPFFYRYTP Trigger: GGGTGTATACCTGTAAAAGAAAGGAAGAGCTAGCTTCAGTATGCAGCCTAGTGAAACTGGAATCAGAACAGAATGAATACGATGAACTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS TCA 90 bp | AGCTCTTCCTTTCTTTTACAGGTATACACCCATTTCTCAGTTCAGTaGATCAACTGGATGTTGCCGTATGTTGGAAGACATACCTTCATC | + |
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Preference number: 5 (lower is better) Translates to: SSSFLLQVYTHFSVQ*INWMLPYVGRHTFI Trigger: GATGAAGGTATGTCTTCCAACATACGGCAACATCCAGTTGATTCACTGAACTGAGAAATGGGTGTATACCTGTAAAAGAAAGGAAGAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS GCA 90 bp | GGTGGAAGGAATGTATTTATTACAGGGTCTCTGCATCTTAGTTCCTaGTATATGGTTTTGTGGCTCATAAAAGAATGCAGACTTGCCCAA | + |
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Preference number: 5 (lower is better) Translates to: GGRNVFITGSLHLSS*YMVLWLIKECRLAQ Trigger: TTGGGCAAGTCTGCATTCTTTTATGAGCCACAAAACCATATAGCAGGAACTAAGATGCAGAGACCCTGTAATAAATACATTCCTTCCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS CCA 90 bp | CACCCATTTCTCAGTTCAGTGAATCAACTGGATGTTGCCGTATGTTaGAAGACATACCTTCATCTTACATCCTTGATTTCTGTGAATTCG | + |
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Preference number: 5 (lower is better) Translates to: HPFLSSVNQLDVAVC*KTYLHLTSLISVNS Trigger: CGAATTCACAGAAATCAAGGATGTAAGATGAAGGTATGTCTTCCAACATACGGCAACATCCAGTTGATTCACTGAACTGAGAAATGGGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS GCA 90 bp | TACAGGTATACACCCATTTCTCAGTTCAGTGAATCAACTGGATGTTaGCGTATGTTGGAAGACATACCTTCATCTTACATCCTTGATTTC | + |
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Preference number: 5 (lower is better) Translates to: YRYTPISQFSESTGC*RMLEDIPSSYILDF Trigger: GAAATCAAGGATGTAAGATGAAGGTATGTCTTCCAACATACGGCAACATCCAGTTGATTCACTGAACTGAGAAATGGGTGTATACCTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS TCA 90 bp | AAAGTGAGAATAAGATATAATCTGGTAATGTGGCCACATGGGTCATaGCTCTTTGACCACATATACATTATATGCTTGAGGCCACGTTTC | + |
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Preference number: 5 (lower is better) Translates to: KVRIRYNLVMWPHGS*LFDHIYIICLRPRF Trigger: GAAACGTGGCCTCAAGCATATAATGTATATGTGGTCAAAGAGTCATGACCCATGTGGCCACATTACCAGATTATATCTTATTCTCACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS TCA 72 bp | CTACCTTCTGCCACGTGTGCCTCTCCAGCTCGGTTATaGGGGAAGAACTGTTCCTCCTCTGCCAGGATGAAC | + |
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Preference number: 6 (lower is better) Translates to: LPSATCASPARL*GKNCSSSARMN Trigger: GTTCATCCTGGCAGAGGAGGAACAGTTCTTCCCTCATAACCGAGCTGGAGAGGCACACGTGGCAGAAGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS CCA 72 bp | TCCCATGTTGCAAGCTGCCTTATGGAGAGGTCCTTATaGCAAGGAACTCAGGGCAGCCTTGGGCTGACAAGA | + |
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Preference number: 6 (lower is better) Translates to: SHVASCLMERSL*QGTQGSLGLTR Trigger: TCTTGTCAGCCCAAGGCTGCCCTGAGTTCCTTGCCATAAGGACCTCTCCATAAGGCAGCTTGCAACATGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS CAA 90 bp | GCTTGTACTCTGTCACCAGCTGGCTCTGATGAAGCACCTCCCATGTaGCAAGCTGCCTTATGGAGAGGTCCTTATGGCAAGGAACTCAGG | + |
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Preference number: 6 (lower is better) Translates to: ACTLSPAGSDEAPPM*QAALWRGPYGKELR Trigger: CCTGAGTTCCTTGCCATAAGGACCTCTCCATAAGGCAGCTTGCAACATGGGAGGTGCTTCATCAGAGCCAGCTGGTGACAGAGTACAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS CAA 90 bp | CTCCTCTGCCAGGATGAACCATCTTGTGCATGCTTCGTATACTCCTaGGTTCTAGGCAGGCAGCTTCTGAATTGGCCTTCAGCAATCCCC | + |
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Preference number: 6 (lower is better) Translates to: LLCQDEPSCACFVYS*VLGRQLLNWPSAIP Trigger: GGGGATTGCTGAAGGCCAATTCAGAAGCTGCCTGCCTAGAACCAAGGAGTATACGAAGCATGCACAAGATGGTTCATCCTGGCAGAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS GCA 72 bp | CTGTTCCTCCTCTGCCAGGATGAACCATCTTGTGCATaGTTCGTATACTCCTTGGTTCTAGGCAGGCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: LFLLCQDEPSCA*FVYSLVLGRQL Trigger: AAGCTGCCTGCCTAGAACCAAGGAGTATACGAAGCATGCACAAGATGGTTCATCCTGGCAGAGGAGGAACAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS CAA 90 bp | TGCATGCTTCGTATACTCCTTGGTTCTAGGCAGGCAGCTTCTGAATaGGCCTTCAGCAATCCCCATCTCCTCCTATTTATGCCCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: CMLRILLGSRQAASE*AFSNPHLLLFMPFC Trigger: GCAGAAGGGCATAAATAGGAGGAGATGGGGATTGCTGAAGGCCAATTCAGAAGCTGCCTGCCTAGAACCAAGGAGTATACGAAGCATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS GCA 72 bp | TCCAGCTCGGTTATGAGGGAAGAACTGTTCCTCCTCTaGCAGGATGAACCATCTTGTGCATGCTTCGTATAC | + |
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Preference number: 6 (lower is better) Translates to: SSSVMREELFLL*QDEPSCACFVY Trigger: GTATACGAAGCATGCACAAGATGGTTCATCCTGGCAGAGGAGGAACAGTTCTTCCCTCATAACCGAGCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS TCA 72 bp | GGTTATGAGGGAAGAACTGTTCCTCCTCTGCCAGGATaGACCATCTTGTGCATGCTTCGTATACTCCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: GYEGRTVPPLPG*TILCMLRILLG Trigger: ACCAAGGAGTATACGAAGCATGCACAAGATGGTTCATCCTGGCAGAGGAGGAACAGTTCTTCCCTCATAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS CCA 72 bp | GTATACTCCTTGGTTCTAGGCAGGCAGCTTCTGAATTaGCCTTCAGCAATCCCCATCTCCTCCTATTTATGC | + |
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Preference number: 6 (lower is better) Translates to: VYSLVLGRQLLN*PSAIPISSYLC Trigger: GCATAAATAGGAGGAGATGGGGATTGCTGAAGGCCAATTCAGAAGCTGCCTGCCTAGAACCAAGGAGTATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS CAA 72 bp | CGTATACTCCTTGGTTCTAGGCAGGCAGCTTCTGAATaGGCCTTCAGCAATCCCCATCTCCTCCTATTTATG | + |
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Preference number: 6 (lower is better) Translates to: RILLGSRQAASE*AFSNPHLLLFM Trigger: CATAAATAGGAGGAGATGGGGATTGCTGAAGGCCAATTCAGAAGCTGCCTGCCTAGAACCAAGGAGTATACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS CAA 72 bp | CAGGATGAACCATCTTGTGCATGCTTCGTATACTCCTaGGTTCTAGGCAGGCAGCTTCTGAATTGGCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: QDEPSCACFVYS*VLGRQLLNWPS Trigger: TGAAGGCCAATTCAGAAGCTGCCTGCCTAGAACCAAGGAGTATACGAAGCATGCACAAGATGGTTCATCCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS CAA 72 bp | CATCATCCTGAATGGAGGTGGAGCCCACTCAGAAGCTaGACTAAAAGGAGAGTCACAGGCAGACATGGTATT | + |
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Preference number: 6 (lower is better) Translates to: HHPEWRWSPLRS*TKRRVTGRHGI Trigger: AATACCATGTCTGCCTGTGACTCTCCTTTTAGTCAAGCTTCTGAGTGGGCTCCACCTCCATTCAGGATGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS CAA 90 bp | TGTTACTACCATCATCCTGAATGGAGGTGGAGCCCACTCAGAAGCTaGACTAAAAGGAGAGTCACAGGCAGACATGGTATTACCCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: CYYHHPEWRWSPLRS*TKRRVTGRHGITRL Trigger: AAGACGGGTAATACCATGTCTGCCTGTGACTCTCCTTTTAGTCAAGCTTCTGAGTGGGCTCCACCTCCATTCAGGATGATGGTAGTAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS CAA 90 bp | CTGGATGTTGCCGTATGTTGGAAGACATACCTTCATCTTACATCCTaGATTTCTGTGAATTCGCACCTCTACCTTCTGCCACGTGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LDVAVCWKTYLHLTS*ISVNSHLYLLPRVP Trigger: AGGCACACGTGGCAGAAGGTAGAGGTGCGAATTCACAGAAATCAAGGATGTAAGATGAAGGTATGTCTTCCAACATACGGCAACATCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS TCA 72 bp | ATCATCCTGAATGGAGGTGGAGCCCACTCAGAAGCTTaGCTAAAAGGAGAGTCACAGGCAGACATGGTATTA | + |
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Preference number: 6 (lower is better) Translates to: IILNGGGAHSEA*LKGESQADMVL Trigger: TAATACCATGTCTGCCTGTGACTCTCCTTTTAGTCAAGCTTCTGAGTGGGCTCCACCTCCATTCAGGATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS GCA 72 bp | AATTGGCCTTCAGCAATCCCCATCTCCTCCTATTTATaGCCTTCTGCAATCTCCTTACTTAGAGTGTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: NWPSAIPISSYL*PSAISLLRVWD Trigger: GTCCCACACTCTAAGTAAGGAGATTGCAGAAGGGCATAAATAGGAGGAGATGGGGATTGCTGAAGGCCAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS CCA 72 bp | TTTAAATTTGAATTCCCTGAGGTTTGGCTTAAAGCTTaGCTTTGGGCCAAGCTGCCATTAGGAGATTGTGCG | + |
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Preference number: 6 (lower is better) Translates to: FKFEFPEVWLKA*LWAKLPLGDCA Trigger: CGCACAATCTCCTAATGGCAGCTTGGCCCAAAGCCAAGCTTTAAGCCAAACCTCAGGGAATTCAAATTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS CAA 72 bp | GCCGTATGTTGGAAGACATACCTTCATCTTACATCCTaGATTTCTGTGAATTCGCACCTCTACCTTCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: AVCWKTYLHLTS*ISVNSHLYLLP Trigger: TGGCAGAAGGTAGAGGTGCGAATTCACAGAAATCAAGGATGTAAGATGAAGGTATGTCTTCCAACATACGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS TCA 72 bp | TTTAGCCAAGAAACCTCAAATATTAAGGACTCCAACTaGTGCCACTGTCTCTGTTCTAGAGACTGTAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: FSQETSNIKDSN*CHCLCSRDCSS Trigger: TGAGCTACAGTCTCTAGAACAGAGACAGTGGCATCAGTTGGAGTCCTTAATATTTGAGGTTTCTTGGCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS GCA 72 bp | CGTATTCATTCTGTTCTGATTCCAGTTTCACTAGGCTaGATACTGAAGCTAGCTCTTCCTTTCTTTTACAGG | + |
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Preference number: 6 (lower is better) Translates to: RIHSVLIPVSLG*ILKLALPFFYR Trigger: CCTGTAAAAGAAAGGAAGAGCTAGCTTCAGTATGCAGCCTAGTGAAACTGGAATCAGAACAGAATGAATACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS CAA 90 bp | ACACCCATTTCTCAGTTCAGTGAATCAACTGGATGTTGCCGTATGTaGGAAGACATACCTTCATCTTACATCCTTGATTTCTGTGAATTC | + |
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Preference number: 6 (lower is better) Translates to: TPISQFSESTGCCRM*EDIPSSYILDFCEF Trigger: GAATTCACAGAAATCAAGGATGTAAGATGAAGGTATGTCTTCCAACATACGGCAACATCCAGTTGATTCACTGAACTGAGAAATGGGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS CAA 72 bp | TCTCAGTTCAGTGAATCAACTGGATGTTGCCGTATGTaGGAAGACATACCTTCATCTTACATCCTTGATTTC | + |
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Preference number: 6 (lower is better) Translates to: SQFSESTGCCRM*EDIPSSYILDF Trigger: GAAATCAAGGATGTAAGATGAAGGTATGTCTTCCAACATACGGCAACATCCAGTTGATTCACTGAACTGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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| CDS TCA 72 bp | CCATTTTCCCTGTTCACTGTCAAATGGAACAATTTATaGACGATGTCTAAGAGCTGGTGGAAGGAATGTATT | + |
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Preference number: 6 (lower is better) Translates to: PFSLFTVKWNNL*TMSKSWWKECI Trigger: AATACATTCCTTCCACCAGCTCTTAGACATCGTTCATAAATTGTTCCATTTGACAGTGAACAGGGAAAATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505158.1 |
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