Pregenerated sensors for LINC02109 (Homo sapiens)
Ensembl gene IDs: ENSG00000259786Ensembl transcript IDs: ENST00000565798.3, ENST00000602470.5, ENST00000602740.3, ENST00000602801.2, ENST00000623067.1, ENST00000623709.1, ENST00000624011.3, ENST00000624110.1, ENST00000624639.1, ENST00000626291.1, ENST00000629527.2, ENST00000656794.1, ENST00000656922.1, ENST00000658190.1, ENST00000661619.1, ENST00000664117.1, ENST00000666790.1, ENST00000669295.1, ENST00000671215.1
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ACTAGGGTCTCCCAAGGCAGCGAGGCGTCCGGGCGGGCGCCAGGGTaGCAGGGCCGAGTCTCCGGAGGTGGCCGCTCTGAAGGCCGAATC | + |
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Preference number: 5 (lower is better) Translates to: TRVSQGSEASGRAPG*QGRVSGGGRSEGRI Trigger: GATTCGGCCTTCAGAGCGGCCACCTCCGGAGACTCGGCCCTGCCACCCTGGCGCCCGCCCGGACGCCTCGCTGCCTTGGGAGACCCTAGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658190.1 |
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| CDS CCA 90 bp | GGTCTGACCGAGGGTCGCTGGGACTCGAGAACTGGAGGCTCTGACTaGAACACTCCTGGGCGCACTCTGGCTCAGCCTGGACCCGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: GLTEGRWDSRTGGSD*NTPGRTLAQPGPGQ Trigger: CTGCCCGGGTCCAGGCTGAGCCAGAGTGCGCCCAGGAGTGTTCCAGTCAGAGCCTCCAGTTCTCGAGTCCCAGCGACCCTCGGTCAGACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658190.1 |
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| CDS TCA 90 bp | TCCAGGTCTGACCGAGGGTCGCTGGGACTCGAGAACTGGAGGCTCTaGCTGGAACACTCCTGGGCGCACTCTGGCTCAGCCTGGACCCGG | + |
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Preference number: 5 (lower is better) Translates to: SRSDRGSLGLENWRL*LEHSWAHSGSAWTR Trigger: CCGGGTCCAGGCTGAGCCAGAGTGCGCCCAGGAGTGTTCCAGTCAGAGCCTCCAGTTCTCGAGTCCCAGCGACCCTCGGTCAGACCTGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658190.1 |
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| CDS CCA 90 bp | CCTCCTCCTCCTCCCAGAGGGCTTCCAGGTCTGACCGAGGGTCGCTaGGACTCGAGAACTGGAGGCTCTGACTGGAACACTCCTGGGCGC | + |
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Preference number: 5 (lower is better) Translates to: PPPPPRGLPGLTEGR*DSRTGGSDWNTPGR Trigger: GCGCCCAGGAGTGTTCCAGTCAGAGCCTCCAGTTCTCGAGTCCCAGCGACCCTCGGTCAGACCTGGAAGCCCTCTGGGAGGAGGAGGAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658190.1 |
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| CDS GCA 90 bp | AGGGCCCGCTGTCCCTCAGGGCCTGAAGAAAATCCATTCTCCGCGTaGTTGCGTTGGAGAACACAGTGGCCCCCACCGCCCGCCCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: RARCPSGPEENPFSA*LRWRTQWPPPPALR Trigger: TCTCAGGGCGGGCGGTGGGGGCCACTGTGTTCTCCAACGCAAGCACGCGGAGAATGGATTTTCTTCAGGCCCTGAGGGACAGCGGGCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658190.1 |
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| CDS CCA 90 bp | TGGCAGGGCCGAGTCTCCGGAGGTGGCCGCTCTGAAGGCCGAATCTaGCCAGAAAATCTGGCCAGAAAAAGGGACCACTGCGTCCTTGCG | + |
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Preference number: 5 (lower is better) Translates to: WQGRVSGGGRSEGRI*PENLARKRDHCVLA Trigger: CGCAAGGACGCAGTGGTCCCTTTTTCTGGCCAGATTTTCTGGCCAGATTCGGCCTTCAGAGCGGCCACCTCCGGAGACTCGGCCCTGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658190.1 |
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| CDS CCA 90 bp | TCTCCGGAGGTGGCCGCTCTGAAGGCCGAATCTGGCCAGAAAATCTaGCCAGAAAAAGGGACCACTGCGTCCTTGCGGCCTCCTTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: SPEVAALKAESGQKI*PEKGTTASLRPPFH Trigger: GTGGAAAGGAGGCCGCAAGGACGCAGTGGTCCCTTTTTCTGGCCAGATTTTCTGGCCAGATTCGGCCTTCAGAGCGGCCACCTCCGGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658190.1 |
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| CDS CCA 90 bp | CCGAGTTCTGAGGCTGGAATTCCAGGATCAAGGTGCCAGCAGGGTTaGTTTCTGGTGAGGCCCCACTCCTCTGCTCGCAGATGGTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: PSSEAGIPGSRCQQG*FLVRPHSSARRWWL Trigger: AAGCCACCATCTGCGAGCAGAGGAGTGGGGCCTCACCAGAAACCAACCCTGCTGGCACCTTGATCCTGGAATTCCAGCCTCAGAACTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000602740.3 ENST00000624639.1 ENST00000664117.1 |
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| CDS CCA 90 bp | CACTCCTCTGCTCGCAGATGGTGGCTTTCTCCCTGTGTGTTTGTATaGCCTTTCCTCTGTGCTGCAGCAGAGAGAGTGAGCTCTGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: HSSARRWWLSPCVFV*PFLCAAAERVSSGA Trigger: GGCACCAGAGCTCACTCTCTCTGCTGCAGCACAGAGGAAAGGCCATACAAACACACAGGGAGAAAGCCACCATCTGCGAGCAGAGGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602740.3 ENST00000624639.1 |
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| CDS CCA 90 bp | CAGGGTTGGTTTCTGGTGAGGCCCCACTCCTCTGCTCGCAGATGGTaGCTTTCTCCCTGTGTGTTTGTATGGCCTTTCCTCTGTGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: QGWFLVRPHSSARRW*LSPCVFVWPFLCAA Trigger: TGCAGCACAGAGGAAAGGCCATACAAACACACAGGGAGAAAGCCACCATCTGCGAGCAGAGGAGTGGGGCCTCACCAGAAACCAACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000602740.3 ENST00000624639.1 |
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| CDS CCA 90 bp | CAGCAGGGTTGGTTTCTGGTGAGGCCCCACTCCTCTGCTCGCAGATaGTGGCTTTCTCCCTGTGTGTTTGTATGGCCTTTCCTCTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: QQGWFLVRPHSSARR*WLSPCVFVWPFLCA Trigger: AGCACAGAGGAAAGGCCATACAAACACACAGGGAGAAAGCCACCATCTGCGAGCAGAGGAGTGGGGCCTCACCAGAAACCAACCCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000602740.3 ENST00000624639.1 ENST00000664117.1 |
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| CDS CCA 90 bp | CAGGGTTGGTTTCTGGTGAGGCCCCACTCCTCTGCTCGCAGATGGTaGCTTTCTCCCTGTGTGTTTGTATGGCCTTTCCTCTGTGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: QGWFLVRPHSSARRW*LSPCVFVWPFLCAP Trigger: TGGAGCACAGAGGAAAGGCCATACAAACACACAGGGAGAAAGCCACCATCTGCGAGCAGAGGAGTGGGGCCTCACCAGAAACCAACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664117.1 |
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| CDS GCA 90 bp | ATCAAGGTGCCAGCAGGGTTGGTTTCTGGTGAGGCCCCACTCCTCTaGTCGCAGATGGTGGCTTTCTCCCTGTGTGTTTGTATGGCCTTT | + |
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Preference number: 5 (lower is better) Translates to: IKVPAGLVSGEAPLL*SQMVAFSLCVCMAF Trigger: AAAGGCCATACAAACACACAGGGAGAAAGCCACCATCTGCGAGCAGAGGAGTGGGGCCTCACCAGAAACCAACCCTGCTGGCACCTTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000602740.3 ENST00000624639.1 ENST00000664117.1 |
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| CDS GCA 90 bp | CAGATGGTGGCTTTCTCCCTGTGTGTTTGTATGGCCTTTCCTCTGTaGTGCAGCAGAGAGAGTGAGCTCTGGTGCCTCTCCCTCCAGATA | + |
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Preference number: 5 (lower is better) Translates to: QMVAFSLCVCMAFPL*CSRESELWCLSLQI Trigger: TATCTGGAGGGAGAGGCACCAGAGCTCACTCTCTCTGCTGCAGCACAGAGGAAAGGCCATACAAACACACAGGGAGAAAGCCACCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602740.3 ENST00000624639.1 |
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| CDS GCA 90 bp | ATGGTGGCTTTCTCCCTGTGTGTTTGTATGGCCTTTCCTCTGTGCTaGAGCAGAGAGAGTGAGCTCTGGTGCCTCTCCCTCCAGATATTA | + |
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Preference number: 5 (lower is better) Translates to: MVAFSLCVCMAFPLC*SRESELWCLSLQIL Trigger: TAATATCTGGAGGGAGAGGCACCAGAGCTCACTCTCTCTGCTGCAGCACAGAGGAAAGGCCATACAAACACACAGGGAGAAAGCCACCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602740.3 ENST00000624639.1 |
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| CDS CCA 90 bp | TCTCTCCAAATGCAGACTCCAGACTGGAAATTGTCCACCAGAACCTaGAAAATCAGGTCAATCCCACCCGAATACTGCGCTTTTCCGACC | + |
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Preference number: 5 (lower is better) Translates to: SLQMQTPDWKLSTRT*KIRSIPPEYCAFPT Trigger: GGTCGGAAAAGCGCAGTATTCGGGTGGGATTGACCTGATTTTCCAGGTTCTGGTGGACAATTTCCAGTCTGGAGTCTGCATTTGGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623067.1 |
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| CDS GCA 90 bp | TTGTCCACCAGAACCTGGAAAATCAGGTCAATCCCACCCGAATACTaGGCTTTTCCGACCAGCTTAAACAATGTCGCACCACGAGATTAT | + |
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Preference number: 5 (lower is better) Translates to: LSTRTWKIRSIPPEY*AFPTSLNNVAPRDY Trigger: ATAATCTCGTGGTGCGACATTGTTTAAGCTGGTCGGAAAAGCGCAGTATTCGGGTGGGATTGACCTGATTTTCCAGGTTCTGGTGGACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623067.1 |
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| CDS GCA 90 bp | AGCAGGAAGGAGCATTCCCAAATATGTTGGCACTTGCTTCCTAGTTaGAGCAAGCAGGGAATTAACATCTGTTTATCCTGGGGATGCTGT | + |
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Preference number: 5 (lower is better) Translates to: SRKEHSQICWHLLPS*SKQGINICLSWGCC Trigger: ACAGCATCCCCAGGATAAACAGATGTTAATTCCCTGCTTGCTGCAACTAGGAAGCAAGTGCCAACATATTTGGGAATGCTCCTTCCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656794.1 |
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| CDS TCA 90 bp | GCATACTTTCCAGGAAGGTCGACCAGGGAGGCATCTTTTTCCTATTaGGGACTGAGGGCAGAGAATTATAAATATCGAGTGGATTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: AYFPGRSTREASFSY*GLRAENYKYRVDWR Trigger: TCTCCAATCCACTCGATATTTATAATTCTCTGCCCTCAGTCCTCAATAGGAAAAAGATGCCTCCCTGGTCGACCTTCCTGGAAAGTATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671215.1 |
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| CDS TCA 90 bp | TTCCAGGAAGGTCGACCAGGGAGGCATCTTTTTCCTATTGAGGACTaGGGGCAGAGAATTATAAATATCGAGTGGATTGGAGAACTTTAC | + |
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Preference number: 5 (lower is better) Translates to: FQEGRPGRHLFPIED*GQRIINIEWIGELY Trigger: GTAAAGTTCTCCAATCCACTCGATATTTATAATTCTCTGCCCTCAGTCCTCAATAGGAAAAAGATGCCTCCCTGGTCGACCTTCCTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000671215.1 |
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| CDS CCA 90 bp | GCATTGTTTGAATTCCTCCATAACCGTGTATCTCATTTAGCCAAGTaGCCACTTCCACTTAGTGAACAAGGGGCATCCCCTTGTTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: ALFEFLHNRVSHLAK*PLPLSEQGASPCLF Trigger: AAACAAACAAGGGGATGCCCCTTGTTCACTAAGTGGAAGTGGCCACTTGGCTAAATGAGATACACGGTTATGGAGGAATTCAAACAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000661619.1 ENST00000669295.1 |
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| CDS TCA 90 bp | CTGTCGTTAGGAAGATGGCTTCTCAGCTTAGGACGGCATTCTTTTTaGCCCGTTGTCTTTGATGGTAGTGTGATTTCTCTCCAACAAAAT | + |
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Preference number: 5 (lower is better) Translates to: LSLGRWLLSLGRHSF*PVVFDGSVISLQQN Trigger: ATTTTGTTGGAGAGAAATCACACTACCATCAAAGACAACGGGTCAAAAAGAATGCCGTCCTAAGCTGAGAAGCCATCTTCCTAACGACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000565798.3 ENST00000602470.5 ENST00000602801.2 ENST00000624011.3 ENST00000656922.1 ENST00000661619.1 ENST00000664117.1 ENST00000666790.1 ENST00000671215.1 |
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| CDS GCA 90 bp | TTTGTTTCAGTCTTCTGGGGCTTAGTGCAGGAATCTCAGGAACTTTaGTGTTCAGAGACAATCAGACTTAATGAATTCCTTCCTCATTCC | + |
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Preference number: 5 (lower is better) Translates to: FVSVFWGLVQESQEL*CSETIRLNEFLPHS Trigger: GGAATGAGGAAGGAATTCATTAAGTCTGATTGTCTCTGAACAGCAAAGTTCCTGAGATTCCTGCACTAAGCCCCAGAAGACTGAAACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623067.1 |
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| CDS CCA 90 bp | AGGGCAGAGAATTATAAATATCGAGTGGATTGGAGAACTTTACTCTaGAAGCAACTTGGTTCCTGCTATAATGATCAACACAGCAATGGC | + |
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Preference number: 5 (lower is better) Translates to: RAENYKYRVDWRTLL*KQLGSCYNDQHSNG Trigger: GCCATTGCTGTGTTGATCATTATAGCAGGAACCAAGTTGCTTCCAGAGTAAAGTTCTCCAATCCACTCGATATTTATAATTCTCTGCCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671215.1 |
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| CDS TCA 90 bp | CTGTCCTATTGGGTTCTTATGAAAGCTGTGTTATGTAGGCATGAATaGTTATATCGTGAGCTACTGGTAATCAACTCAACCTTCAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: LSYWVLMKAVLCRHE*LYRELLVINSTFSL Trigger: AAGGCTGAAGGTTGAGTTGATTACCAGTAGCTCACGATATAATCATTCATGCCTACATAACACAGCTTTCATAAGAACCCAATAGGACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000565798.3 ENST00000602470.5 ENST00000602801.2 ENST00000623709.1 ENST00000624011.3 ENST00000656794.1 ENST00000656922.1 ENST00000661619.1 ENST00000664117.1 ENST00000666790.1 ENST00000669295.1 ENST00000671215.1 |
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| CDS GCA 90 bp | GGAATTACCTCCCCACCAAGATCAGAGTACATACTCAGTTTCAATTaGTGCATTTCGTCTTTCAATTTAAAGGGGGCTAAATATCATCTA | + |
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Preference number: 5 (lower is better) Translates to: GITSPPRSEYILSFN*CISSFNLKGAKYHL Trigger: TAGATGATATTTAGCCCCCTTTAAATTGAAAGACGAAATGCAGCAATTGAAACTGAGTATGTACTCTGATCTTGGTGGGGAGGTAATTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656794.1 |
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| CDS TCA 90 bp | TCTTTAAAATTTCCATTTGATTACGTGACGTTTAGCATGATGAAGTaGCGTTTAGCAGTTTGGTTTGTTTCAGTCTTCTGGGGCTTAGTG | + |
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Preference number: 5 (lower is better) Translates to: SLKFPFDYVTFSMMK*RLAVWFVSVFWGLV Trigger: CACTAAGCCCCAGAAGACTGAAACAAACCAAACTGCTAAACGTCACTTCATCATGCTAAACGTCACGTAATCAAATGGAAATTTTAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623067.1 |
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| CDS CCA 90 bp | TATATTTTGAATTTGTTGAGAGTTCATCAGAGACACAACATCTTATaGGGAATTACCTCCCCACCAAGATCAGAGTACATACTCAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: YILNLLRVHQRHNIL*GITSPPRSEYILSF Trigger: GAAACTGAGTATGTACTCTGATCTTGGTGGGGAGGTAATTCCCCATAAGATGTTGTGTCTCTGATGAACTCTCAACAAATTCAAAATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656794.1 |
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| CDS TCA 90 bp | ACAAATAATAGCAAAATGAAGATATACATGTCAGTCATGTGCATCTaGTATGTGTGGCAGTCTATAGTCCAGAACAACACAGGAGTAAGT | + |
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Preference number: 5 (lower is better) Translates to: TNNSKMKIYMSVMCI*YVWQSIVQNNTGVS Trigger: ACTTACTCCTGTGTTGTTCTGGACTATAGACTGCCACACATATCAGATGCACATGACTGACATGTATATCTTCATTTTGCTATTATTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000602801.2 ENST00000626291.1 ENST00000656922.1 ENST00000661619.1 ENST00000671215.1 |
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| CDS CCA 72 bp | TCCCAAGGCAGCGAGGCGTCCGGGCGGGCGCCAGGGTaGCAGGGCCGAGTCTCCGGAGGTGGCCGCTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: SQGSEASGRAPG*QGRVSGGGRSE Trigger: TTCAGAGCGGCCACCTCCGGAGACTCGGCCCTGCCACCCTGGCGCCCGCCCGGACGCCTCGCTGCCTTGGGA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658190.1 |
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| CDS CCA 72 bp | ACGCCAGGTCTCCTTCTCGCTTCCGGGTCCGCACTCTaGGTCCGCAGTCCCTCAACCCACCAGGAGGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: TPGLLLASGSAL*VRSPSTHQEAR Trigger: TCTGGCCTCCTGGTGGGTTGAGGGACTGCGGACCCAGAGTGCGGACCCGGAAGCGAGAAGGAGACCTGGCGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658190.1 |
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| CDS GCA 72 bp | CCTCAGGGCCTGAAGAAAATCCATTCTCCGCGTGCTTaGGTTGGAGAACACAGTGGCCCCCACCGCCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: PQGLKKIHSPRA*VGEHSGPHRPP Trigger: GGGCGGGCGGTGGGGGCCACTGTGTTCTCCAACGCAAGCACGCGGAGAATGGATTTTCTTCAGGCCCTGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658190.1 |
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| CDS CCA 72 bp | GAGGCCAGAGATGCGGCTGCGGTGGATCCAGGGAGCTaGGGCCCAGATCCACCAAGATCAGGGAAGGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: EARDAAAVDPGS*GPDPPRSGKVP Trigger: AGGAACCTTCCCTGATCTTGGTGGATCTGGGCCCCAGCTCCCTGGATCCACCGCAGCCGCATCTCTGGCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658190.1 |
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| CDS CCA 72 bp | GAGGGTCGCTGGGACTCGAGAACTGGAGGCTCTGACTaGAACACTCCTGGGCGCACTCTGGCTCAGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: EGRWDSRTGGSD*NTPGRTLAQPG Trigger: TCCAGGCTGAGCCAGAGTGCGCCCAGGAGTGTTCCAGTCAGAGCCTCCAGTTCTCGAGTCCCAGCGACCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658190.1 |
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| CDS CAA 72 bp | CCCTCAGGGCCTGAAGAAAATCCATTCTCCGCGTGCTaGCGTTGGAGAACACAGTGGCCCCCACCGCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: PSGPEENPFSAC*RWRTQWPPPPA Trigger: GGCGGGCGGTGGGGGCCACTGTGTTCTCCAACGCAAGCACGCGGAGAATGGATTTTCTTCAGGCCCTGAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658190.1 |
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| CDS CCA 72 bp | GGGCCTGAAGAAAATCCATTCTCCGCGTGCTTGCGTTaGAGAACACAGTGGCCCCCACCGCCCGCCCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: GPEENPFSACLR*RTQWPPPPALR Trigger: TCTCAGGGCGGGCGGTGGGGGCCACTGTGTTCTCCAACGCAAGCACGCGGAGAATGGATTTTCTTCAGGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658190.1 |
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| CDS CCA 72 bp | CGCGCTGAGGCAGAAGGCTTTAGAGATCGAGGGACATaGGGGACCCCTGACGCCAGGTCTCCTTCTCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RAEAEGFRDRGT*GTPDARSPSRF Trigger: GAAGCGAGAAGGAGACCTGGCGTCAGGGGTCCCCCATGTCCCTCGATCTCTAAAGCCTTCTGCCTCAGCGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658190.1 |
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| CDS GCA 72 bp | TGTCCCTCAGGGCCTGAAGAAAATCCATTCTCCGCGTaGTTGCGTTGGAGAACACAGTGGCCCCCACCGCCC | + |
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Preference number: 6 (lower is better) Translates to: CPSGPEENPFSA*LRWRTQWPPPP Trigger: GGGCGGTGGGGGCCACTGTGTTCTCCAACGCAAGCACGCGGAGAATGGATTTTCTTCAGGCCCTGAGGGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658190.1 |
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| CDS CCA 72 bp | GAGGCTGGAATTCCAGGATCAAGGTGCCAGCAGGGTTaGTTTCTGGTGAGGCCCCACTCCTCTGCTCGCAGA | + |
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Preference number: 6 (lower is better) Translates to: EAGIPGSRCQQG*FLVRPHSSARR Trigger: TCTGCGAGCAGAGGAGTGGGGCCTCACCAGAAACCAACCCTGCTGGCACCTTGATCCTGGAATTCCAGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000602740.3 ENST00000624639.1 ENST00000664117.1 |
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| CDS CCA 72 bp | GTGGCCGCTCTGAAGGCCGAATCTGGCCAGAAAATCTaGCCAGAAAAAGGGACCACTGCGTCCTTGCGGCCT | + |
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Preference number: 6 (lower is better) Translates to: VAALKAESGQKI*PEKGTTASLRP Trigger: AGGCCGCAAGGACGCAGTGGTCCCTTTTTCTGGCCAGATTTTCTGGCCAGATTCGGCCTTCAGAGCGGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658190.1 |
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| CDS GCA 72 bp | CCAGCAGGGTTGGTTTCTGGTGAGGCCCCACTCCTCTaGTCGCAGATGGTGGCTTTCTCCCTGTGTGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: PAGLVSGEAPLL*SQMVAFSLCVC Trigger: ACAAACACACAGGGAGAAAGCCACCATCTGCGAGCAGAGGAGTGGGGCCTCACCAGAAACCAACCCTGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000602740.3 ENST00000624639.1 ENST00000664117.1 |
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| CDS GCA 72 bp | TTCTCCCTGTGTGTTTGTATGGCCTTTCCTCTGTGCTaGAGCAGAGAGAGTGAGCTCTGGTGCCTCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: FSLCVCMAFPLC*SRESELWCLSL Trigger: GAGGGAGAGGCACCAGAGCTCACTCTCTCTGCTGCAGCACAGAGGAAAGGCCATACAAACACACAGGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602740.3 ENST00000624639.1 |
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| CDS GCA 72 bp | GCTTTCTCCCTGTGTGTTTGTATGGCCTTTCCTCTGTaGTGCAGCAGAGAGAGTGAGCTCTGGTGCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: AFSLCVCMAFPL*CSRESELWCLS Trigger: GGAGAGGCACCAGAGCTCACTCTCTCTGCTGCAGCACAGAGGAAAGGCCATACAAACACACAGGGAGAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602740.3 ENST00000624639.1 |
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| CDS CCA 72 bp | GCTCGCAGATGGTGGCTTTCTCCCTGTGTGTTTGTATaGCCTTTCCTCTGTGCTGCAGCAGAGAGAGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: ARRWWLSPCVFV*PFLCAAAERVS Trigger: GCTCACTCTCTCTGCTGCAGCACAGAGGAAAGGCCATACAAACACACAGGGAGAAAGCCACCATCTGCGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602740.3 ENST00000624639.1 |
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| CDS CCA 72 bp | TGGTTTCTGGTGAGGCCCCACTCCTCTGCTCGCAGATaGTGGCTTTCTCCCTGTGTGTTTGTATGGCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: WFLVRPHSSARR*WLSPCVFVWPF Trigger: GAAAGGCCATACAAACACACAGGGAGAAAGCCACCATCTGCGAGCAGAGGAGTGGGGCCTCACCAGAAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000602740.3 ENST00000624639.1 ENST00000664117.1 |
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| CDS CAA 72 bp | CCTCTGCTCGCAGATGGTGGCTTTCTCCCTGTGTGTTaGTATGGCCTTTCCTCTGTGCTGCAGCAGAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: PLLADGGFLPVC*YGLSSVLQQRE Trigger: CTCTCTCTGCTGCAGCACAGAGGAAAGGCCATACAAACACACAGGGAGAAAGCCACCATCTGCGAGCAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602740.3 ENST00000624639.1 |
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| CDS CAA 90 bp | GGCCCCACTCCTCTGCTCGCAGATGGTGGCTTTCTCCCTGTGTGTTaGTATGGCCTTTCCTCTGTGCTCCAGATATTATATTATCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: GPTPLLADGGFLPVC*YGLSSVLQILYYLE Trigger: CTCAAGATAATATAATATCTGGAGCACAGAGGAAAGGCCATACAAACACACAGGGAGAAAGCCACCATCTGCGAGCAGAGGAGTGGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664117.1 |
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| CDS CCA 72 bp | ATGCAGACTCCAGACTGGAAATTGTCCACCAGAACCTaGAAAATCAGGTCAATCCCACCCGAATACTGCGCT | + |
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Preference number: 6 (lower is better) Translates to: MQTPDWKLSTRT*KIRSIPPEYCA Trigger: AGCGCAGTATTCGGGTGGGATTGACCTGATTTTCCAGGTTCTGGTGGACAATTTCCAGTCTGGAGTCTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623067.1 |
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| CDS TCA 72 bp | TTGTATGGCCTTTCCTCTGTGCTGCAGCAGAGAGAGTaGGCTCTGGTGCCTCTCCCTCCAGATATTATATTA | + |
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Preference number: 6 (lower is better) Translates to: LYGLSSVLQQRE*ALVPLPPDIIL Trigger: TAATATAATATCTGGAGGGAGAGGCACCAGAGCTCACTCTCTCTGCTGCAGCACAGAGGAAAGGCCATACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602740.3 ENST00000624639.1 |
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| CDS CCA 72 bp | GAATTCCTCCATAACCGTGTATCTCATTTAGCCAAGTaGCCACTTCCACTTAGTGAACAAGGGGCATCCCCT | + |
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Preference number: 6 (lower is better) Translates to: EFLHNRVSHLAK*PLPLSEQGASP Trigger: AGGGGATGCCCCTTGTTCACTAAGTGGAAGTGGCCACTTGGCTAAATGAGATACACGGTTATGGAGGAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000661619.1 ENST00000669295.1 |
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| CDS CAA 72 bp | CCTCTGCTCGCAGATGGTGGCTTTCTCCCTGTGTGTTaGTATGGCCTTTCCTCTGTGCTCCAGATATTATAT | + |
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Preference number: 6 (lower is better) Translates to: PLLADGGFLPVC*YGLSSVLQILY Trigger: ATATAATATCTGGAGCACAGAGGAAAGGCCATACAAACACACAGGGAGAAAGCCACCATCTGCGAGCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664117.1 |
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| CDS TCA 72 bp | CCAGGAAGGTCGACCAGGGAGGCATCTTTTTCCTATTaGGGACTGAGGGCAGAGAATTATAAATATCGAGTG | + |
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Preference number: 6 (lower is better) Translates to: PGRSTREASFSY*GLRAENYKYRV Trigger: CACTCGATATTTATAATTCTCTGCCCTCAGTCCTCAATAGGAAAAAGATGCCTCCCTGGTCGACCTTCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671215.1 |
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| CDS GCA 72 bp | CCAGCAGGAAGGAGCATTCCCAAATATGTTGGCACTTaGTTCCTAGTTGCAGCAAGCAGGGAATTAACATCT | + |
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Preference number: 6 (lower is better) Translates to: PAGRSIPKYVGT*FLVAASRELTS Trigger: AGATGTTAATTCCCTGCTTGCTGCAACTAGGAAGCAAGTGCCAACATATTTGGGAATGCTCCTTCCTGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656794.1 |
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| CDS CCA 72 bp | GGTAATCAACTCAACCTTCAGCCTTTCCTCTGTCTCTaGAAGTCATGGGGTGGGGCTGAATATTCTAATCCT | + |
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Preference number: 6 (lower is better) Translates to: GNQLNLQPFLCL*KSWGGAEYSNP Trigger: AGGATTAGAATATTCAGCCCCACCCCATGACTTCCAGAGACAGAGGAAAGGCTGAAGGTTGAGTTGATTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656922.1 |
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| CDS TCA 72 bp | GGAAGATGGCTTCTCAGCTTAGGACGGCATTCTTTTTaGCCCGTTGTCTTTGATGGTAGTGTGATTTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: GRWLLSLGRHSF*PVVFDGSVISL Trigger: GAGAGAAATCACACTACCATCAAAGACAACGGGTCAAAAAGAATGCCGTCCTAAGCTGAGAAGCCATCTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENST00000565798.3 ENST00000602470.5 ENST00000602801.2 ENST00000624011.3 ENST00000624110.1 ENST00000626291.1 ENST00000656922.1 ENST00000661619.1 ENST00000664117.1 ENST00000666790.1 ENST00000671215.1 |
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| CDS CCA 72 bp | TGTGCTGTAGAATCTCTCCAAATGCAGACTCCAGACTaGAAATTGTCCACCAGAACCTGGAAAATCAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: CAVESLQMQTPD*KLSTRTWKIRS Trigger: TGACCTGATTTTCCAGGTTCTGGTGGACAATTTCCAGTCTGGAGTCTGCATTTGGAGAGATTCTACAGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623067.1 |
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| CDS CAA 72 bp | GAGGACCTTGGTGTGCAGTTTTCAATAGTTCAGCAATaGTTCCACAGACGGCAGCAAGAAAAAGTGCATGCT | + |
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Preference number: 6 (lower is better) Translates to: EDLGVQFSIVQQ*FHRRQQEKVHA Trigger: AGCATGCACTTTTTCTTGCTGCCGTCTGTGGAACAATTGCTGAACTATTGAAAACTGCACACCAAGGTCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661619.1 |
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| CDS GCA 72 bp | GAGCATTCCCAAATATGTTGGCACTTGCTTCCTAGTTaGAGCAAGCAGGGAATTAACATCTGTTTATCCTGG | + |
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Preference number: 6 (lower is better) Translates to: EHSQICWHLLPS*SKQGINICLSW Trigger: CCAGGATAAACAGATGTTAATTCCCTGCTTGCTGCAACTAGGAAGCAAGTGCCAACATATTTGGGAATGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656794.1 |
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| CDS TCA 72 bp | GAAGATGGCTGCATGCTATTACGGAGAAGTAGTTCATaGAACAAAGACAACTGGCACTCCCAATACCAAAAG | + |
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Preference number: 6 (lower is better) Translates to: EDGCMLLRRSSS*NKDNWHSQYQK Trigger: CTTTTGGTATTGGGAGTGCCAGTTGTCTTTGTTTCATGAACTACTTCTCCGTAATAGCATGCAGCCATCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000565798.3 ENST00000602740.3 ENST00000624110.1 ENST00000624639.1 ENST00000664117.1 ENST00000666790.1 |
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| CDS GCA 72 bp | CTGGGGATGCTGTTTTACCTCTTGAAGATGGCTGCATaGTATTACGGAGAAGTAGTTCATGAAACAAAGACA | + |
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Preference number: 6 (lower is better) Translates to: LGMLFYLLKMAA*YYGEVVHETKT Trigger: TGTCTTTGTTTCATGAACTACTTCTCCGTAATAGCATGCAGCCATCTTCAAGAGGTAAAACAGCATCCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000565798.3 ENST00000624110.1 |
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| CDS GCA 72 bp | GTCTTCTGGGGCTTAGTGCAGGAATCTCAGGAACTTTaGTGTTCAGAGACAATCAGACTTAATGAATTCCTT | + |
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Preference number: 6 (lower is better) Translates to: VFWGLVQESQEL*CSETIRLNEFL Trigger: AAGGAATTCATTAAGTCTGATTGTCTCTGAACAGCAAAGTTCCTGAGATTCCTGCACTAAGCCCCAGAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623067.1 |
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| CDS GCA 72 bp | GATTGGAGAACTTTACTCTGGAAGCAACTTGGTTCCTaGTATAATGATCAACACAGCAATGGCTCTGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: DWRTLLWKQLGS*YNDQHSNGSVF Trigger: GAACACAGAGCCATTGCTGTGTTGATCATTATAGCAGGAACCAAGTTGCTTCCAGAGTAAAGTTCTCCAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671215.1 |
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| CDS CCA 72 bp | TGTGCTGTAGAATCTCTCCAAATGCAGACTCCAGACTaGAAATTGTCCACCAGAACCTGTATTTCTTCTCAA | + |
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Preference number: 6 (lower is better) Translates to: CAVESLQMQTPD*KLSTRTCISSQ Trigger: TTGAGAAGAAATACAGGTTCTGGTGGACAATTTCCAGTCTGGAGTCTGCATTTGGAGAGATTCTACAGCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629527.2 |
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| CDS CAA 72 bp | TTTACCCTTGGTGTGCAGTTTTCAATAGTTCAGCAATaGTTCCACAGACGGCAGCAAGAAAAAGTGCATGCT | + |
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Preference number: 6 (lower is better) Translates to: FTLGVQFSIVQQ*FHRRQQEKVHA Trigger: AGCATGCACTTTTTCTTGCTGCCGTCTGTGGAACAATTGCTGAACTATTGAAAACTGCACACCAAGGGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669295.1 |
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| CDS CAA 72 bp | ATCGAGTGGATTGGAGAACTTTACTCTGGAAGCAACTaGGTTCCTGCTATAATGATCAACACAGCAATGGCT | + |
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Preference number: 6 (lower is better) Translates to: IEWIGELYSGSN*VPAIMINTAMA Trigger: AGCCATTGCTGTGTTGATCATTATAGCAGGAACCAAGTTGCTTCCAGAGTAAAGTTCTCCAATCCACTCGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671215.1 |
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| CDS GCA 72 bp | TCCCCACCAAGATCAGAGTACATACTCAGTTTCAATTaGTGCATTTCGTCTTTCAATTTAAAGGGGGCTAAA | + |
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Preference number: 6 (lower is better) Translates to: SPPRSEYILSFN*CISSFNLKGAK Trigger: TTTAGCCCCCTTTAAATTGAAAGACGAAATGCAGCAATTGAAACTGAGTATGTACTCTGATCTTGGTGGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656794.1 |
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| CDS CCA 72 bp | AATTTGTTGAGAGTTCATCAGAGACACAACATCTTATaGGGAATTACCTCCCCACCAAGATCAGAGTACATA | + |
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Preference number: 6 (lower is better) Translates to: NLLRVHQRHNIL*GITSPPRSEYI Trigger: TATGTACTCTGATCTTGGTGGGGAGGTAATTCCCCATAAGATGTTGTGTCTCTGATGAACTCTCAACAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656794.1 |
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| CDS TCA 72 bp | TGGGTTCTTATGAAAGCTGTGTTATGTAGGCATGAATaGTTATATCGTGAGCTACTGGTAATCAACTCAACC | + |
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Preference number: 6 (lower is better) Translates to: WVLMKAVLCRHE*LYRELLVINST Trigger: GGTTGAGTTGATTACCAGTAGCTCACGATATAATCATTCATGCCTACATAACACAGCTTTCATAAGAACCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000565798.3 ENST00000602470.5 ENST00000602801.2 ENST00000623709.1 ENST00000624011.3 ENST00000656794.1 ENST00000656922.1 ENST00000661619.1 ENST00000664117.1 ENST00000666790.1 ENST00000669295.1 ENST00000671215.1 |
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| CDS CCA 72 bp | AATTATAAATATCGAGTGGATTGGAGAACTTTACTCTaGAAGCAACTTGGTTCCTGCTATAATGATCAACAC | + |
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Preference number: 6 (lower is better) Translates to: NYKYRVDWRTLL*KQLGSCYNDQH Trigger: GTGTTGATCATTATAGCAGGAACCAAGTTGCTTCCAGAGTAAAGTTCTCCAATCCACTCGATATTTATAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671215.1 |
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