Pregenerated sensors for LINC02102 (Homo sapiens)
Ensembl gene IDs: ENSG00000248677Ensembl transcript IDs: ENST00000503989.1, ENST00000514788.1, ENST00000664592.1, ENST00000667865.1
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTGAGGTCCTGGGGATGTCTGTTACTCCAGAATCTCCTGCGGGACTaGCATAGCCTCCTGAGCCCCTGTCCCAGTGGGTCCACTGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: LRSWGCLLLQNLLRD*HSLLSPCPSGSTAQ Trigger: CTGGGCAGTGGACCCACTGGGACAGGGGCTCAGGAGGCTATGGCAGTCCCGCAGGAGATTCTGGAGTAACAGACATCCCCAGGACCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS CCA 90 bp | GGGAAGGAGAGCCTGGCCTGCGAAGAAGGCGCACAAGTCTGTGGGTaGTTTCCTTTCCGAGGCCCACGAGGTTGCACTTCCCTCTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: GKESLACEEGAQVCG*FPFRGPRGCTSLWL Trigger: CAACCAGAGGGAAGTGCAACCTCGTGGGCCTCGGAAAGGAAACCACCCACAGACTTGTGCGCCTTCTTCGCAGGCCAGGCTCTCCTTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS CCA 90 bp | ATGGGGGAAGGAGAGCCTGGCCTGCGAAGAAGGCGCACAAGTCTGTaGGTGGTTTCCTTTCCGAGGCCCACGAGGTTGCACTTCCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: MGEGEPGLRRRRTSL*VVSFPRPTRLHFPL Trigger: CAGAGGGAAGTGCAACCTCGTGGGCCTCGGAAAGGAAACCACCCACAGACTTGTGCGCCTTCTTCGCAGGCCAGGCTCTCCTTCCCCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS TCA 90 bp | GATGTCTGTTACTCCAGAATCTCCTGCGGGACTGCCATAGCCTCCTaGGCCCCTGTCCCAGTGGGTCCACTGCCCAGTACTGTTCCACAC | + |
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Preference number: 5 (lower is better) Translates to: DVCYSRISCGTAIAS*APVPVGPLPSTVPH Trigger: GTGTGGAACAGTACTGGGCAGTGGACCCACTGGGACAGGGGCTCAGGAGGCTATGGCAGTCCCGCAGGAGATTCTGGAGTAACAGACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS GCA 90 bp | CCCTTCCTGTGCCTGGCTTTGGCCAACAGCCTCACATTGGATTTCTaGTGCCATGCTTGGCCCCTGGCCACTGAGAGCCCTGGGGAATTT | + |
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Preference number: 5 (lower is better) Translates to: PFLCLALANSLTLDF*CHAWPLATESPGEF Trigger: AAATTCCCCAGGGCTCTCAGTGGCCAGGGGCCAAGCATGGCAGCAGAAATCCAATGTGAGGCTGTTGGCCAAAGCCAGGCACAGGAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS GCA 90 bp | CCAATGACCTCAGTTATGGGGCACGGCAAACTTGGTGACTTTAGCTaGAGGCAGAGTCTGGGGTGGCGGTGCCTGCAGTCTGGTGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: PMTSVMGHGKLGDFS*RQSLGWRCLQSGVL Trigger: CAGCACACCAGACTGCAGGCACCGCCACCCCAGACTCTGCCTGCAGCTAAAGTCACCAAGTTTGCCGTGCCCCATAACTGAGGTCATTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000514788.1 ENST00000667865.1 |
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| CDS CCA 90 bp | CCCCCAAAAGTGCTGACCATGGCACACCCTTCCTGTGCCTGGCTTTaGCCAACAGCCTCACATTGGATTTCTGCTGCCATGCTTGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: PPKVLTMAHPSCAWL*PTASHWISAAMLGP Trigger: GGGGCCAAGCATGGCAGCAGAAATCCAATGTGAGGCTGTTGGCCAAAGCCAGGCACAGGAAGGGTGTGCCATGGTCAGCACTTTTGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS CCA 90 bp | GGGTTGCTACTCCAGCCTGGGTGCCCAAACACGGAAGACAAGATGTaGGGTACTGCCTGGGAGGACAGCCACCACCAATGTGTGCCATGT | + |
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Preference number: 5 (lower is better) Translates to: GLLLQPGCPNTEDKM*GTAWEDSHHQCVPC Trigger: ACATGGCACACATTGGTGGTGGCTGTCCTCCCAGGCAGTACCCCACATCTTGTCTTCCGTGTTTGGGCACCCAGGCTGGAGTAGCAACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS GCA 90 bp | CTCCAAGTCTTCACCTTCTTACCATGGGGGAAGGAGAGCCTGGCCTaGGAAGAAGGCGCACAAGTCTGTGGGTGGTTTCCTTTCCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: LQVFTFLPWGKESLA*EEGAQVCGWFPFRG Trigger: GCCTCGGAAAGGAAACCACCCACAGACTTGTGCGCCTTCTTCGCAGGCCAGGCTCTCCTTCCCCCATGGTAAGAAGGTGAAGACTTGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS GCA 90 bp | ACTCCAGCCTGGGTGCCCAAACACGGAAGACAAGATGTGGGGTACTaGCTGGGAGGACAGCCACCACCAATGTGTGCCATGTCGTTCCTA | + |
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Preference number: 5 (lower is better) Translates to: TPAWVPKHGRQDVGY*LGGQPPPMCAMSFL Trigger: TAGGAACGACATGGCACACATTGGTGGTGGCTGTCCTCCCAGGCAGTACCCCACATCTTGTCTTCCGTGTTTGGGCACCCAGGCTGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS TCA 90 bp | TGTTCCCTGCTGCTCACACACAGCCCCTCTTCCTTTGCCATTGACTaGGATGGGTTGCTACTCCAGCCTGGGTGCCCAAACACGGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: CSLLLTHSPSSFAID*DGLLLQPGCPNTED Trigger: GTCTTCCGTGTTTGGGCACCCAGGCTGGAGTAGCAACCCATCTCAGTCAATGGCAAAGGAAGAGGGGCTGTGTGTGAGCAGCAGGGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS TCA 90 bp | AAGTTGTTCCCTGCTGCTCACACACAGCCCCTCTTCCTTTGCCATTaGCTGAGATGGGTTGCTACTCCAGCCTGGGTGCCCAAACACGGA | + |
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Preference number: 5 (lower is better) Translates to: KLFPAAHTQPLFLCH*LRWVATPAWVPKHG Trigger: TCCGTGTTTGGGCACCCAGGCTGGAGTAGCAACCCATCTCAGTCAATGGCAAAGGAAGAGGGGCTGTGTGTGAGCAGCAGGGAACAACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS GCA 90 bp | TGCTCACACACAGCCCCTCTTCCTTTGCCATTGACTGAGATGGGTTaGTACTCCAGCCTGGGTGCCCAAACACGGAAGACAAGATGTGGG | + |
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Preference number: 5 (lower is better) Translates to: CSHTAPLPLPLTEMG*YSSLGAQTRKTRCG Trigger: CCCACATCTTGTCTTCCGTGTTTGGGCACCCAGGCTGGAGTAGCAACCCATCTCAGTCAATGGCAAAGGAAGAGGGGCTGTGTGTGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS CCA 90 bp | CCAATCTCCAAGTCTTCACCTTCTTACCATGGGGGAAGGAGAGCCTaGCCTGCGAAGAAGGCGCACAAGTCTGTGGGTGGTTTCCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: PISKSSPSYHGGRRA*PAKKAHKSVGGFLS Trigger: GGAAAGGAAACCACCCACAGACTTGTGCGCCTTCTTCGCAGGCCAGGCTCTCCTTCCCCCATGGTAAGAAGGTGAAGACTTGGAGATTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS CCA 90 bp | TGTAGCGGGGCCTGTATCTTGATAGAGGCAAGGAAACCTGCGTCCTaGGGCTCAGTGGTTCTTGACACTGGCTTTCCGGTAGGATCACCA | + |
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Preference number: 5 (lower is better) Translates to: CSGACILIEARKPAS*GSVVLDTGFPVGSP Trigger: TGGTGATCCTACCGGAAAGCCAGTGTCAAGAACCACTGAGCCCCAGGACGCAGGTTTCCTTGCCTCTATCAAGATACAGGCCCCGCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS TCA 90 bp | TGCCTGGGAGGACAGCCACCACCAATGTGTGCCATGTCGTTCCTATaGAACGCTGAGGTCCTGGGGATGTCTGTTACTCCAGAATCTCCT | + |
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Preference number: 5 (lower is better) Translates to: CLGGQPPPMCAMSFL*NAEVLGMSVTPESP Trigger: AGGAGATTCTGGAGTAACAGACATCCCCAGGACCTCAGCGTTTCATAGGAACGACATGGCACACATTGGTGGTGGCTGTCCTCCCAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS CCA 90 bp | ATGGTACCCCCAAAAGTGCTGACCATGGCACACCCTTCCTGTGCCTaGCTTTGGCCAACAGCCTCACATTGGATTTCTGCTGCCATGCTT | + |
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Preference number: 5 (lower is better) Translates to: MVPPKVLTMAHPSCA*LWPTASHWISAAML Trigger: AAGCATGGCAGCAGAAATCCAATGTGAGGCTGTTGGCCAAAGCCAGGCACAGGAAGGGTGTGCCATGGTCAGCACTTTTGGGGGTACCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS CCA 90 bp | TTCTTACCATGGGGGAAGGAGAGCCTGGCCCTGAGATGGATGGTCTaGGTTTCTTCCCATTTCCTAGAACTGCTTACCCGTGTGGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: FLPWGKESLALRWMV*VSSHFLELLTRVEP Trigger: TGGCTCCACACGGGTAAGCAGTTCTAGGAAATGGGAAGAAACCCAGACCATCCATCTCAGGGCCAGGCTCTCCTTCCCCCATGGTAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000514788.1 |
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| CDS TCA 90 bp | ATTTCTTCCCCTCACCCCTTTGCTGGCCCTCTGCAGAGAACTAGCTaGAAACTCCAGGGCCCAAGGGAATGGCAGAACTTCTGCCTGAAA | + |
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Preference number: 5 (lower is better) Translates to: ISSPHPFAGPLQRTS*KLQGPREWQNFCLK Trigger: TTTCAGGCAGAAGTTCTGCCATTCCCTTGGGCCCTGGAGTTTTCAGCTAGTTCTCTGCAGAGGGCCAGCAAAGGGGTGAGGGGAAGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS CCA 90 bp | GTCTTCACCTTCTTACCATGGGGGAAGGAGAGCCTGGCCCTGAGATaGATGGTCTGGGTTTCTTCCCATTTCCTAGAACTGCTTACCCGT | + |
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Preference number: 5 (lower is better) Translates to: VFTFLPWGKESLALR*MVWVSSHFLELLTR Trigger: ACGGGTAAGCAGTTCTAGGAAATGGGAAGAAACCCAGACCATCCATCTCAGGGCCAGGCTCTCCTTCCCCCATGGTAAGAAGGTGAAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000514788.1 |
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| CDS GCA 90 bp | TTTAATGGTACCCCCAAAAGTGCTGACCATGGCACACCCTTCCTGTaGCTGGCTTTGGCCAACAGCCTCACATTGGATTTCTGCTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: FNGTPKSADHGTPFL*LALANSLTLDFCCH Trigger: ATGGCAGCAGAAATCCAATGTGAGGCTGTTGGCCAAAGCCAGGCACAGGAAGGGTGTGCCATGGTCAGCACTTTTGGGGGTACCATTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS CCA 90 bp | CACAGCGATTTTAAAATGAATGCACCATCTTCCTTGCTCAGGCAGTaGCTCCTGCGGTCACCATCTAAGGCAACCTGTTCCGACCTCCCT | + |
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Preference number: 5 (lower is better) Translates to: HSDFKMNAPSSLLRQ*LLRSPSKATCSDLP Trigger: AGGGAGGTCGGAACAGGTTGCCTTAGATGGTGACCGCAGGAGCCACTGCCTGAGCAAGGAAGATGGTGCATTCATTTTAAAATCGCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503989.1 ENST00000667865.1 |
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| CDS TCA 90 bp | CTTGATAGAGGCAAGGAAACCTGCGTCCTGGGGCTCAGTGGTTCTTaGCACTGGCTTTCCGGTAGGATCACCATGGACACTAGAATGTTT | + |
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Preference number: 5 (lower is better) Translates to: LDRGKETCVLGLSGS*HWLSGRITMDTRMF Trigger: AAACATTCTAGTGTCCATGGTGATCCTACCGGAAAGCCAGTGTCAAGAACCACTGAGCCCCAGGACGCAGGTTTCCTTGCCTCTATCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS TCA 90 bp | TCAGCCAGATATGCTCCCTCTTCCCATTATCCCCAACAGGTCTGCTaGACAAGTGCACTCAACTGCCTGGGTGCAAGTTTTCCCATGACA | + |
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Preference number: 5 (lower is better) Translates to: SARYAPSSHYPQQVC*TSALNCLGASFPMT Trigger: TGTCATGGGAAAACTTGCACCCAGGCAGTTGAGTGCACTTGTTCAGCAGACCTGTTGGGGATAATGGGAAGAGGGAGCATATCTGGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS GCA 90 bp | TTATCCCCAACAGGTCTGCTGAACAAGTGCACTCAACTGCCTGGGTaGAAGTTTTCCCATGACATCAAATGTCTAGCTTGTGAGGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: LSPTGLLNKCTQLPG*KFSHDIKCLACEGC Trigger: GCAGCCCTCACAAGCTAGACATTTGATGTCATGGGAAAACTTGCACCCAGGCAGTTGAGTGCACTTGTTCAGCAGACCTGTTGGGGATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS GCA 90 bp | GGGTGCAAGTTTTCCCATGACATCAAATGTCTAGCTTGTGAGGGCTaGACTGTCTTGCAGGTGCTTCTATTTCTTGCTCTCAGCAGTACT | + |
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Preference number: 5 (lower is better) Translates to: GCKFSHDIKCLACEG*TVLQVLLFLALSST Trigger: AGTACTGCTGAGAGCAAGAAATAGAAGCACCTGCAAGACAGTGCAGCCCTCACAAGCTAGACATTTGATGTCATGGGAAAACTTGCACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS GCA 90 bp | ATATGCTCCCTCTTCCCATTATCCCCAACAGGTCTGCTGAACAAGTaGACTCAACTGCCTGGGTGCAAGTTTTCCCATGACATCAAATGT | + |
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Preference number: 5 (lower is better) Translates to: ICSLFPLSPTGLLNK*TQLPGCKFSHDIKC Trigger: ACATTTGATGTCATGGGAAAACTTGCACCCAGGCAGTTGAGTGCACTTGTTCAGCAGACCTGTTGGGGATAATGGGAAGAGGGAGCATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS GCA 90 bp | ATTTTACCTCCGAAACATGTTGTGGCAAAGTCAGTGTGCTGTGTTTaGCAGACCCAGTTCCTTTTTGTTCTGGGCTCTCAGCTGGACTAT | + |
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Preference number: 5 (lower is better) Translates to: ILPPKHVVAKSVCCV*QTQFLFVLGSQLDY Trigger: ATAGTCCAGCTGAGAGCCCAGAACAAAAAGGAACTGGGTCTGGCAAACACAGCACACTGACTTTGCCACAACATGTTTCGGAGGTAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS CCA 90 bp | AAAAGAGAGAGAAAATCCAGCAAACTTACCCTGAGATGGATGGTCTaGGTTTCTTCCCATTTCCTAGAACTGCTTACCCGTGTGGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: KRERKSSKLTLRWMV*VSSHFLELLTRVEP Trigger: TGGCTCCACACGGGTAAGCAGTTCTAGGAAATGGGAAGAAACCCAGACCATCCATCTCAGGGTAAGTTTGCTGGATTTTCTCTCTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503989.1 ENST00000667865.1 |
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| CDS TCA 90 bp | AGAAATTTTCCCCATTCTGAGGCCAGTAAGTTTAATCAGTTTGCCTaGGGCCACATAGCTAGGAAATGGCAGAATGATGGCAAAGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: RNFPHSEASKFNQFA*GHIARKWQNDGKVR Trigger: CCTGACTTTGCCATCATTCTGCCATTTCCTAGCTATGTGGCCTCAGGCAAACTGATTAAACTTACTGGCCTCAGAATGGGGAAAATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS CCA 90 bp | ATTTGCTATTATGTTTGGCAGAGTTGGGCACCTGGAATGTTCTCTTaGTCAAGTAATTTTGATGAGAGTTCCTTTCTGTCCTCAAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: ICYYVWQSWAPGMFS*SSNFDESSFLSSRS Trigger: TGACCTTGAGGACAGAAAGGAACTCTCATCAAAATTACTTGACCAAGAGAACATTCCAGGTGCCCAACTCTGCCAAACATAATAGCAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS CCA 90 bp | TTTCTTACTTTCCTGGTACATATTTGCTATTATGTTTGGCAGAGTTaGGCACCTGGAATGTTCTCTTGGTCAAGTAATTTTGATGAGAGT | + |
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Preference number: 5 (lower is better) Translates to: FLTFLVHICYYVWQS*APGMFSWSSNFDES Trigger: ACTCTCATCAAAATTACTTGACCAAGAGAACATTCCAGGTGCCCAACTCTGCCAAACATAATAGCAAATATGTACCAGGAAAGTAAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS CCA 72 bp | GGAGAGCCTGGCCTGCGAAGAAGGCGCACAAGTCTGTaGGTGGTTTCCTTTCCGAGGCCCACGAGGTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: GEPGLRRRRTSL*VVSFPRPTRLH Trigger: GTGCAACCTCGTGGGCCTCGGAAAGGAAACCACCCACAGACTTGTGCGCCTTCTTCGCAGGCCAGGCTCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS TCA 72 bp | TACTCCAGAATCTCCTGCGGGACTGCCATAGCCTCCTaGGCCCCTGTCCCAGTGGGTCCACTGCCCAGTACT | + |
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Preference number: 6 (lower is better) Translates to: YSRISCGTAIAS*APVPVGPLPST Trigger: AGTACTGGGCAGTGGACCCACTGGGACAGGGGCTCAGGAGGCTATGGCAGTCCCGCAGGAGATTCTGGAGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS GCA 72 bp | TGGGGATGTCTGTTACTCCAGAATCTCCTGCGGGACTaGCATAGCCTCCTGAGCCCCTGTCCCAGTGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: WGCLLLQNLLRD*HSLLSPCPSGS Trigger: GGACCCACTGGGACAGGGGCTCAGGAGGCTATGGCAGTCCCGCAGGAGATTCTGGAGTAACAGACATCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS GCA 72 bp | AGGCGCTACGAACCTGAGCACCAACTGGGACCTCCATaGGTGGACTGGGCCATAGTGAGAGAGAGGCATGGG | + |
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Preference number: 6 (lower is better) Translates to: RRYEPEHQLGPP*VDWAIVRERHG Trigger: CCCATGCCTCTCTCTCACTATGGCCCAGTCCACGCATGGAGGTCCCAGTTGGTGCTCAGGTTCGTAGCGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664592.1 ENST00000667865.1 |
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| CDS CCA 72 bp | AGCCTGGCCTGCGAAGAAGGCGCACAAGTCTGTGGGTaGTTTCCTTTCCGAGGCCCACGAGGTTGCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: SLACEEGAQVCG*FPFRGPRGCTS Trigger: GGAAGTGCAACCTCGTGGGCCTCGGAAAGGAAACCACCCACAGACTTGTGCGCCTTCTTCGCAGGCCAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS CCA 72 bp | CTCCAGCCTGGGTGCCCAAACACGGAAGACAAGATGTaGGGTACTGCCTGGGAGGACAGCCACCACCAATGT | + |
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Preference number: 6 (lower is better) Translates to: LQPGCPNTEDKM*GTAWEDSHHQC Trigger: ACATTGGTGGTGGCTGTCCTCCCAGGCAGTACCCCACATCTTGTCTTCCGTGTTTGGGCACCCAGGCTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS CAA 90 bp | ACCCCCAAAAGTGCTGACCATGGCACACCCTTCCTGTGCCTGGCTTaGGCCAACAGCCTCACATTGGATTTCTGCTGCCATGCTTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: TPKSADHGTPFLCLA*ANSLTLDFCCHAWP Trigger: GGGCCAAGCATGGCAGCAGAAATCCAATGTGAGGCTGTTGGCCAAAGCCAGGCACAGGAAGGGTGTGCCATGGTCAGCACTTTTGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS TCA 72 bp | CCTCACCCCTTTGCTGGCCCTCTGCAGAGAACTAGCTaGAAACTCCAGGGCCCAAGGGAATGGCAGAACTTC | + |
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Preference number: 6 (lower is better) Translates to: PHPFAGPLQRTS*KLQGPREWQNF Trigger: GAAGTTCTGCCATTCCCTTGGGCCCTGGAGTTTTCAGCTAGTTCTCTGCAGAGGGCCAGCAAAGGGGTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS TCA 72 bp | CTGCTCACACACAGCCCCTCTTCCTTTGCCATTGACTaGGATGGGTTGCTACTCCAGCCTGGGTGCCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: LLTHSPSSFAID*DGLLLQPGCPN Trigger: GTTTGGGCACCCAGGCTGGAGTAGCAACCCATCTCAGTCAATGGCAAAGGAAGAGGGGCTGTGTGTGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS GCA 72 bp | TTCACCTTCTTACCATGGGGGAAGGAGAGCCTGGCCTaGGAAGAAGGCGCACAAGTCTGTGGGTGGTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: FTFLPWGKESLA*EEGAQVCGWFP Trigger: AGGAAACCACCCACAGACTTGTGCGCCTTCTTCGCAGGCCAGGCTCTCCTTCCCCCATGGTAAGAAGGTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS CCA 72 bp | AAGTCTTCACCTTCTTACCATGGGGGAAGGAGAGCCTaGCCTGCGAAGAAGGCGCACAAGTCTGTGGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: KSSPSYHGGRRA*PAKKAHKSVGG Trigger: ACCACCCACAGACTTGTGCGCCTTCTTCGCAGGCCAGGCTCTCCTTCCCCCATGGTAAGAAGGTGAAGACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS CAA 90 bp | AAAGTTGTTCCCTGCTGCTCACACACAGCCCCTCTTCCTTTGCCATaGACTGAGATGGGTTGCTACTCCAGCCTGGGTGCCCAAACACGG | + |
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Preference number: 6 (lower is better) Translates to: KVVPCCSHTAPLPLP*TEMGCYSSLGAQTR Trigger: CCGTGTTTGGGCACCCAGGCTGGAGTAGCAACCCATCTCAGTCAATGGCAAAGGAAGAGGGGCTGTGTGTGAGCAGCAGGGAACAACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS TCA 72 bp | CTCACTCAGAGACGGAATTTGTCACCTGTATGTGCTTaGCGCTGGGGCCCAGCAACTACCCCTAGTCGTGAC | + |
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Preference number: 6 (lower is better) Translates to: LTQRRNLSPVCA*RWGPATTPSRD Trigger: GTCACGACTAGGGGTAGTTGCTGGGCCCCAGCGTCAAGCACATACAGGTGACAAATTCCGTCTCTGAGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS GCA 72 bp | ACCCCCAAAAGTGCTGACCATGGCACACCCTTCCTGTaGCTGGCTTTGGCCAACAGCCTCACATTGGATTTC | + |
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Preference number: 6 (lower is better) Translates to: TPKSADHGTPFL*LALANSLTLDF Trigger: GAAATCCAATGTGAGGCTGTTGGCCAAAGCCAGGCACAGGAAGGGTGTGCCATGGTCAGCACTTTTGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS GCA 72 bp | ACAGCCCCTCTTCCTTTGCCATTGACTGAGATGGGTTaGTACTCCAGCCTGGGTGCCCAAACACGGAAGACA | + |
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Preference number: 6 (lower is better) Translates to: TAPLPLPLTEMG*YSSLGAQTRKT Trigger: TGTCTTCCGTGTTTGGGCACCCAGGCTGGAGTAGCAACCCATCTCAGTCAATGGCAAAGGAAGAGGGGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS CAA 72 bp | GTTGTTCCCTGCTGCTCACACACAGCCCCTCTTCCTTaGCCATTGACTGAGATGGGTTGCTACTCCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: VVPCCSHTAPLP*PLTEMGCYSSL Trigger: CAGGCTGGAGTAGCAACCCATCTCAGTCAATGGCAAAGGAAGAGGGGCTGTGTGTGAGCAGCAGGGAACAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS CAA 72 bp | TCTTGCTCTCAGCAGTACTGTAGCGGGGCCTGTATCTaGATAGAGGCAAGGAAACCTGCGTCCTGGGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SCSQQYCSGACI*IEARKPASWGS Trigger: TGAGCCCCAGGACGCAGGTTTCCTTGCCTCTATCAAGATACAGGCCCCGCTACAGTACTGCTGAGAGCAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS CAA 90 bp | AAGCTGAAAGTTGTTCCCTGCTGCTCACACACAGCCCCTCTTCCTTaGCCATTGACTGAGATGGGTTGCTACTCCAGCCTGGGTGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: KLKVVPCCSHTAPLP*PLTEMGCYSSLGAQ Trigger: TTGGGCACCCAGGCTGGAGTAGCAACCCATCTCAGTCAATGGCAAAGGAAGAGGGGCTGTGTGTGAGCAGCAGGGAACAACTTTCAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS TCA 72 bp | GGACAGCCACCACCAATGTGTGCCATGTCGTTCCTATaGAACGCTGAGGTCCTGGGGATGTCTGTTACTCCA | + |
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Preference number: 6 (lower is better) Translates to: GQPPPMCAMSFL*NAEVLGMSVTP Trigger: TGGAGTAACAGACATCCCCAGGACCTCAGCGTTTCATAGGAACGACATGGCACACATTGGTGGTGGCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS TCA 72 bp | GGTATTAGAACCTCCCATTCCTGCTTCCTTTGCCATTaGCTGAGATGGGTTGCTACTCCAGCCTGGGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: GIRTSHSCFLCH*LRWVATPAWVP Trigger: GGGCACCCAGGCTGGAGTAGCAACCCATCTCAGTCAATGGCAAAGGAAGCAGGAATGGGAGGTTCTAATACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664592.1 |
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| CDS GCA 72 bp | CCATTCCTGCTTCCTTTGCCATTGACTGAGATGGGTTaGTACTCCAGCCTGGGTGCCCAAACACGGAAGACA | + |
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Preference number: 6 (lower is better) Translates to: PFLLPLPLTEMG*YSSLGAQTRKT Trigger: TGTCTTCCGTGTTTGGGCACCCAGGCTGGAGTAGCAACCCATCTCAGTCAATGGCAAAGGAAGCAGGAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664592.1 |
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| CDS GCA 72 bp | CTCCCATTCCTTCCTTTGCCATTGACTGAGATGGGTTaGTACTCCAGCCTGGGTGCCCAAACACGGAAGACA | + |
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Preference number: 6 (lower is better) Translates to: LPFLPLPLTEMG*YSSLGAQTRKT Trigger: TGTCTTCCGTGTTTGGGCACCCAGGCTGGAGTAGCAACCCATCTCAGTCAATGGCAAAGGAAGGAATGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667865.1 |
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| CDS CCA 72 bp | GCCTGTATCTTGATAGAGGCAAGGAAACCTGCGTCCTaGGGCTCAGTGGTTCTTGACACTGGCTTTCCGGTA | + |
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Preference number: 6 (lower is better) Translates to: ACILIEARKPAS*GSVVLDTGFPV Trigger: TACCGGAAAGCCAGTGTCAAGAACCACTGAGCCCCAGGACGCAGGTTTCCTTGCCTCTATCAAGATACAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS TCA 72 bp | GCAGAACTTCTGCCTGAAAGAGCCAGGATTCCTGAATaGCTGTGTGGAGCAGAGTTCTCCTTCCCCATACCC | + |
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Preference number: 6 (lower is better) Translates to: AELLPERARIPE*LCGAEFSFPIP Trigger: GGGTATGGGGAAGGAGAACTCTGCTCCACACAGTCATTCAGGAATCCTGGCTCTTTCAGGCAGAAGTTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS TCA 72 bp | TTAGAACCTCCCATTCCTGCTTCCTTTGCCATTGACTaGGATGGGTTGCTACTCCAGCCTGGGTGCCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: LEPPIPASFAID*DGLLLQPGCPN Trigger: GTTTGGGCACCCAGGCTGGAGTAGCAACCCATCTCAGTCAATGGCAAAGGAAGCAGGAATGGGAGGTTCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664592.1 |
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| CDS GCA 72 bp | CTCAAACCTGCCTTTCTGGGCTGTCCTGGCCCCAACTaGCTTGTTCAGGTTTTCAGGCATCCAAAGAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: LKPAFLGCPGPN*LVQVFRHPKRR Trigger: TCTTCTCTTTGGATGCCTGAAAACCTGAACAAGGCAGTTGGGGCCAGGACAGCCCAGAAAGGCAGGTTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS CAA 90 bp | GCTTCTATTTCTTGCTCTCAGCAGTACTGTAGCGGGGCCTGTATCTaGATAGAGGCAAGGAAACCTGCGTCCTGGGGCTCAGTGGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: ASISCSQQYCSGACI*IEARKPASWGSVVL Trigger: AAGAACCACTGAGCCCCAGGACGCAGGTTTCCTTGCCTCTATCAAGATACAGGCCCCGCTACAGTACTGCTGAGAGCAAGAAATAGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS CAA 90 bp | TACAGCTGGGAGCAGGAGAGCCATTCTCTTCCATTAATGGGAAAGTaGGAGCCTGAACCAAGAGCAGAAAGCATGGAGCAGAAGCCATGG | + |
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Preference number: 6 (lower is better) Translates to: YSWEQESHSLPLMGK*EPEPRAESMEQKPW Trigger: CCATGGCTTCTGCTCCATGCTTTCTGCTCTTGGTTCAGGCTCCAACTTTCCCATTAATGGAAGAGAATGGCTCTCCTGCTCCCAGCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS TCA 72 bp | GTATTAGAACCTCCCATTCCTTCCTTTGCCATTGACTaGGATGGGTTGCTACTCCAGCCTGGGTGCCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: VLEPPIPSFAID*DGLLLQPGCPN Trigger: GTTTGGGCACCCAGGCTGGAGTAGCAACCCATCTCAGTCAATGGCAAAGGAAGGAATGGGAGGTTCTAATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667865.1 |
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| CDS GCA 72 bp | GTCTGTGGGTGGTTTCCTTTCCGAGGCCCACGAGGTTaGACTTCCCTCTGGTTGTTAAGTGTGATGTATAGA | + |
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Preference number: 6 (lower is better) Translates to: VCGWFPFRGPRG*TSLWLLSVMYR Trigger: TCTATACATCACACTTAACAACCAGAGGGAAGTGCAACCTCGTGGGCCTCGGAAAGGAAACCACCCACAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS TCA 72 bp | TATGCTCCCTCTTCCCATTATCCCCAACAGGTCTGCTaGACAAGTGCACTCAACTGCCTGGGTGCAAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: YAPSSHYPQQVC*TSALNCLGASF Trigger: AAAACTTGCACCCAGGCAGTTGAGTGCACTTGTTCAGCAGACCTGTTGGGGATAATGGGAAGAGGGAGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS CCA 72 bp | CTGAGCCCCCAAAGATTTTACCTCCGAAACATGTTGTaGCAAAGTCAGTGTGCTGTGTTTGCCAGACCCAGT | + |
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Preference number: 6 (lower is better) Translates to: LSPQRFYLRNML*QSQCAVFARPS Trigger: ACTGGGTCTGGCAAACACAGCACACTGACTTTGCCACAACATGTTTCGGAGGTAAAATCTTTGGGGGCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS TCA 72 bp | CCCCATTCTGAGGCCAGTAAGTTTAATCAGTTTGCCTaGGGCCACATAGCTAGGAAATGGCAGAATGATGGC | + |
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Preference number: 6 (lower is better) Translates to: PHSEASKFNQFA*GHIARKWQNDG Trigger: GCCATCATTCTGCCATTTCCTAGCTATGTGGCCTCAGGCAAACTGATTAAACTTACTGGCCTCAGAATGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS CCA 72 bp | TGGGAAAGTTGGAGCCTGAACCAAGAGCAGAAAGCATaGAGCAGAAGCCATGGACTGATTCTTCCTTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: WESWSLNQEQKA*SRSHGLILPSV Trigger: AACTGAAGGAAGAATCAGTCCATGGCTTCTGCTCCATGCTTTCTGCTCTTGGTTCAGGCTCCAACTTTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503989.1 ENST00000664592.1 ENST00000667865.1 |
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| CDS CAA 72 bp | TCACACACATCTCCGTTTATTGAGCTGAGAGCTTCTTaGGGCCCTCACTCAGAGACGGAATTTGTCACCTGT | + |
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Preference number: 6 (lower is better) Translates to: SHTSPFIELRAS*GPHSETEFVTC Trigger: ACAGGTGACAAATTCCGTCTCTGAGTGAGGGCCCAAAGAAGCTCTCAGCTCAATAAACGGAGATGTGTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS CAA 90 bp | GTGTGTACATCACACACATCTCCGTTTATTGAGCTGAGAGCTTCTTaGGGCCCTCACTCAGAGACGGAATTTGTCACCTGTATGTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: VCTSHTSPFIELRAS*GPHSETEFVTCMCL Trigger: CAAGCACATACAGGTGACAAATTCCGTCTCTGAGTGAGGGCCCAAAGAAGCTCTCAGCTCAATAAACGGAGATGTGTGTGATGTACACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS CAA 90 bp | GATTTTACCTCCGAAACATGTTGTGGCAAAGTCAGTGTGCTGTGTTaGCCAGACCCAGTTCCTTTTTGTTCTGGGCTCTCAGCTGGACTA | + |
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Preference number: 6 (lower is better) Translates to: DFTSETCCGKVSVLC*PDPVPFCSGLSAGL Trigger: TAGTCCAGCTGAGAGCCCAGAACAAAAAGGAACTGGGTCTGGCAAACACAGCACACTGACTTTGCCACAACATGTTTCGGAGGTAAAATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS TCA 72 bp | ATGTGTGTACATCACACACATCTCCGTTTATTGAGCTaGGAGCTTCTTTGGGCCCTCACTCAGAGACGGAAT | + |
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Preference number: 6 (lower is better) Translates to: MCVHHTHLRLLS*ELLWALTQRRN Trigger: ATTCCGTCTCTGAGTGAGGGCCCAAAGAAGCTCTCAGCTCAATAAACGGAGATGTGTGTGATGTACACACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS GCA 72 bp | ACAGGTCTGCTGAACAAGTGCACTCAACTGCCTGGGTaGAAGTTTTCCCATGACATCAAATGTCTAGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: TGLLNKCTQLPG*KFSHDIKCLAC Trigger: ACAAGCTAGACATTTGATGTCATGGGAAAACTTGCACCCAGGCAGTTGAGTGCACTTGTTCAGCAGACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS CAA 90 bp | TTTGGCAGAGTTGGGCACCTGGAATGTTCTCTTGGTCAAGTAATTTaGATGAGAGTTCCTTTCTGTCCTCAAGGTCAGCCAGATATGCTC | + |
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Preference number: 6 (lower is better) Translates to: FGRVGHLECSLGQVI*MRVPFCPQGQPDML Trigger: GAGCATATCTGGCTGACCTTGAGGACAGAAAGGAACTCTCATCAAAATTACTTGACCAAGAGAACATTCCAGGTGCCCAACTCTGCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS GCA 72 bp | TTTTCCCATGACATCAAATGTCTAGCTTGTGAGGGCTaGACTGTCTTGCAGGTGCTTCTATTTCTTGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: FSHDIKCLACEG*TVLQVLLFLAL Trigger: GAGAGCAAGAAATAGAAGCACCTGCAAGACAGTGCAGCCCTCACAAGCTAGACATTTGATGTCATGGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS CAA 72 bp | GTTGGGCACCTGGAATGTTCTCTTGGTCAAGTAATTTaGATGAGAGTTCCTTTCTGTCCTCAAGGTCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: VGHLECSLGQVI*MRVPFCPQGQP Trigger: TGGCTGACCTTGAGGACAGAAAGGAACTCTCATCAAAATTACTTGACCAAGAGAACATTCCAGGTGCCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS CAA 90 bp | TTGAATCAATTACTGAGCCCCCAAAGATTTTACCTCCGAAACATGTaGTGGCAAAGTCAGTGTGCTGTGTTTGCCAGACCCAGTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LNQLLSPQRFYLRNM*WQSQCAVFARPSSF Trigger: AAAGGAACTGGGTCTGGCAAACACAGCACACTGACTTTGCCACAACATGTTTCGGAGGTAAAATCTTTGGGGGCTCAGTAATTGATTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503989.1 |
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| CDS TCA 72 bp | AATCTTCTAGAGTATGTCAATTTGACCTTGATTGCCTaGCTCACCAATCTCCAAGTCTTCACCTTCTTACCA | + |
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Preference number: 6 (lower is better) Translates to: NLLEYVNLTLIA*LTNLQVFTFLP Trigger: TGGTAAGAAGGTGAAGACTTGGAGATTGGTGAGTCAGGCAATCAAGGTCAAATTGACATACTCTAGAAGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000503989.1 ENST00000514788.1 ENST00000664592.1 ENST00000667865.1 |
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