Pregenerated sensors for LINC02101 (Homo sapiens)
Ensembl gene IDs: ENSG00000248132Ensembl transcript IDs: ENST00000505861.3, ENST00000659991.1, ENST00000660090.1, ENST00000661072.1
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTTATCGCCAAGCTGCTTTCTGGGCTGGAGGTCTCCCTAGTAGTGTaGACCCAACCTACAGCTAGGATTTTTGAGTTCTGCGGTTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: LIAKLLSGLEVSLVV*TQPTARIFEFCGSS Trigger: AGAGGAACCGCAGAACTCAAAAATCCTAGCTGTAGGTTGGGTCCACACTACTAGGGAGACCTCCAGCCCAGAAAGCAGCTTGGCGATAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661072.1 |
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| CDS TCA 90 bp | CAGTTGGTAGTGCCACAGTCTTCCTACAGGGTTTTCTGTAAATGTTaGCTCCTGTTGCTGGACTTCTCTGCTGCGTGCTCTGGGGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: QLVVPQSSYRVFCKC*LLLLDFSAACSGAF Trigger: GAAAGCCCCAGAGCACGCAGCAGAGAAGTCCAGCAACAGGAGTCAACATTTACAGAAAACCCTGTAGGAAGACTGTGGCACTACCAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000505861.3 ENST00000659991.1 ENST00000660090.1 |
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| CDS TCA 90 bp | TTCTGCCCCGAAATCTTGAGAACCACTGACTTATGTGGTCAGAAGTaGTCGACTCCCTGGGCTGGGAAGCTCCAATTTTCTCCTCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: FCPEILRTTDLCGQK*STPWAGKLQFSPPD Trigger: ATCTGGAGGAGAAAATTGGAGCTTCCCAGCCCAGGGAGTCGATCACTTCTGACCACATAAGTCAGTGGTTCTCAAGATTTCGGGGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660090.1 |
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| CDS TCA 90 bp | TTTCTCAAGGCCGAAGTAGTCCATCTCCCTAGGCATACAATTTGCTaGGGGCAAGGAGTTAAAGGTAGCTACAGCAGCAGAGTAGGACTC | + |
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Preference number: 5 (lower is better) Translates to: FLKAEVVHLPRHTIC*GQGVKGSYSSRVGL Trigger: GAGTCCTACTCTGCTGCTGTAGCTACCTTTAACTCCTTGCCCTCAGCAAATTGTATGCCTAGGGAGATGGACTACTTCGGCCTTGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000505861.3 ENST00000659991.1 ENST00000661072.1 |
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| CDS TCA 90 bp | CTGTTGCTGGACTTCTCTGCTGCGTGCTCTGGGGCTTTCATTCTGTaGTCTATGGCAGTTATGTTTTCTTTGGGAACACAGTGTTATTCC | + |
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Preference number: 5 (lower is better) Translates to: LLLDFSAACSGAFIL*SMAVMFSLGTQCYS Trigger: GGAATAACACTGTGTTCCCAAAGAAAACATAACTGCCATAGATCACAGAATGAAAGCCCCAGAGCACGCAGCAGAGAAGTCCAGCAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000505861.3 ENST00000659991.1 ENST00000660090.1 |
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| CDS TCA 90 bp | TTAAAAACTCAGATTGTTCTTCTGCCCCGAAATCTTGAGAACCACTaGCTTATGTGGTCAGAAGTGATCGACTCCCTGGGCTGGGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: LKTQIVLLPRNLENH*LMWSEVIDSLGWEA Trigger: AGCTTCCCAGCCCAGGGAGTCGATCACTTCTGACCACATAAGTCAGTGGTTCTCAAGATTTCGGGGCAGAAGAACAATCTGAGTTTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660090.1 |
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| CDS CCA 90 bp | CTTCAGCAAGCTCTTTGTCCATCTGGAGCTTCAAAACTCTTATTCTaGAATATCACTCTGCAGCTAGCTGTCTTCAAGTTGTCGCCACTG | + |
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Preference number: 5 (lower is better) Translates to: LQQALCPSGASKLLF*NITLQLAVFKLSPL Trigger: CAGTGGCGACAACTTGAAGACAGCTAGCTGCAGAGTGATATTCCAGAATAAGAGTTTTGAAGCTCCAGATGGACAAAGAGCTTGCTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660090.1 |
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| CDS CCA 90 bp | TTTAAGCCAATTCACTTATCTTATGGAATTGCTGAGAGGTCTCCATaGGCATTTATTGCAGACAGCCCTTCCTTTGAAGGGCTGGAGCTA | + |
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Preference number: 5 (lower is better) Translates to: FKPIHLSYGIAERSP*AFIADSPSFEGLEL Trigger: TAGCTCCAGCCCTTCAAAGGAAGGGCTGTCTGCAATAAATGCCCATGGAGACCTCTCAGCAATTCCATAAGATAAGTGAATTGGCTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000505861.3 ENST00000659991.1 ENST00000661072.1 |
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| CDS CCA 90 bp | ATTAGGGAGGATGCATGGATTCCTTCAGCAAGCTCTTTGTCCATCTaGAGCTTCAAAACTCTTATTCTGGAATATCACTCTGCAGCTAGC | + |
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Preference number: 5 (lower is better) Translates to: IREDAWIPSASSLSI*SFKTLILEYHSAAS Trigger: GCTAGCTGCAGAGTGATATTCCAGAATAAGAGTTTTGAAGCTCCAGATGGACAAAGAGCTTGCTGAAGGAATCCATGCATCCTCCCTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660090.1 |
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| CDS TCA 90 bp | CTTCCTTTGAAGGGCTGGAGCTATCTTCCTGAGTCAGAGTACTTTTaGGCATGGGAAGTCAACATTATCTTCCAAGGCTTCTTTACTGTT | + |
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Preference number: 5 (lower is better) Translates to: LPLKGWSYLPESEYF*AWEVNIIFQGFFTV Trigger: AACAGTAAAGAAGCCTTGGAAGATAATGTTGACTTCCCATGCTCAAAAGTACTCTGACTCAGGAAGATAGCTCCAGCCCTTCAAAGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000505861.3 ENST00000659991.1 ENST00000661072.1 |
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| CDS CCA 90 bp | GCTCTGGGGCTTTCATTCTGTGATCTATGGCAGTTATGTTTTCTTTaGGAACACAGTGTTATTCCACAGTTCCTGTTTCATTTGCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: ALGLSFCDLWQLCFL*EHSVIPQFLFHLLF Trigger: AAAGAGCAAATGAAACAGGAACTGTGGAATAACACTGTGTTCCCAAAGAAAACATAACTGCCATAGATCACAGAATGAAAGCCCCAGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000505861.3 ENST00000659991.1 ENST00000660090.1 |
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| CDS TCA 90 bp | TATCCCAGGCCTAATGAATCAGAATATCTGGAATGTGTGGGAAGCTaGCTCAAGCATATGCATCTTTTAAAAACTCAGATTGTTCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: YPRPNESEYLECVGS*LKHMHLLKTQIVLL Trigger: CAGAAGAACAATCTGAGTTTTTAAAAGATGCATATGCTTGAGTCAGCTTCCCACACATTCCAGATATTCTGATTCATTAGGCCTGGGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660090.1 |
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| CDS CCA 72 bp | TCCTTCATTCTTCCGTCTTATCGCCAAGCTGCTTTCTaGGCTGGAGGTCTCCCTAGTAGTGTGGACCCAACC | + |
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Preference number: 6 (lower is better) Translates to: SFILPSYRQAAF*AGGLPSSVDPT Trigger: GGTTGGGTCCACACTACTAGGGAGACCTCCAGCCCAGAAAGCAGCTTGGCGATAAGACGGAAGAATGAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661072.1 |
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| CDS TCA 72 bp | GTGCCACAGTCTTCCTACAGGGTTTTCTGTAAATGTTaGCTCCTGTTGCTGGACTTCTCTGCTGCGTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: VPQSSYRVFCKC*LLLLDFSAACS Trigger: AGAGCACGCAGCAGAGAAGTCCAGCAACAGGAGTCAACATTTACAGAAAACCCTGTAGGAAGACTGTGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000505861.3 ENST00000659991.1 ENST00000660090.1 |
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| CDS TCA 72 bp | GTCTCCATGGGCATTTATTGCAGACAGCCCTTCCTTTaGAGGGCTGGAGCTATCTTCCTGAGTCAGAGTACT | + |
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Preference number: 6 (lower is better) Translates to: VSMGIYCRQPFL*RAGAIFLSQST Trigger: AGTACTCTGACTCAGGAAGATAGCTCCAGCCCTTCAAAGGAAGGGCTGTCTGCAATAAATGCCCATGGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000505861.3 ENST00000659991.1 ENST00000661072.1 |
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| CDS TCA 72 bp | CAGATTGTTCTTCTGCCCCGAAATCTTGAGAACCACTaGCTTATGTGGTCAGAAGTGATCGACTCCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: QIVLLPRNLENH*LMWSEVIDSLG Trigger: GCCCAGGGAGTCGATCACTTCTGACCACATAAGTCAGTGGTTCTCAAGATTTCGGGGCAGAAGAACAATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660090.1 |
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| CDS CCA 72 bp | TTGAGTTCTGCGGTTCCTCTGCTGGAAGGGCTTCAGTaGTTGCTTCGAGGGTATGTTCCAGCATTTCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: LSSAVPLLEGLQ*LLRGYVPAFLK Trigger: TTTCAGAAATGCTGGAACATACCCTCGAAGCAACCACTGAAGCCCTTCCAGCAGAGGAACCGCAGAACTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661072.1 |
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| CDS TCA 72 bp | CCCTGCCAGGAATTCCCTAAACAGAACACCATGATGTaGAAGTTGGCTCCCAAAGGCCAACTTGGCTACAAA | + |
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Preference number: 6 (lower is better) Translates to: PCQEFPKQNTMM*KLAPKGQLGYK Trigger: TTTGTAGCCAAGTTGGCCTTTGGGAGCCAACTTTCACATCATGGTGTTCTGTTTAGGGAATTCCTGGCAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660090.1 |
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| CDS CCA 72 bp | TTGACTCCTGTTGCTGGACTTCTCTGCTGCGTGCTCTaGGGCTTTCATTCTGTGATCTATGGCAGTTATGTT | + |
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Preference number: 6 (lower is better) Translates to: LTPVAGLLCCVL*GFHSVIYGSYV Trigger: AACATAACTGCCATAGATCACAGAATGAAAGCCCCAGAGCACGCAGCAGAGAAGTCCAGCAACAGGAGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000505861.3 ENST00000659991.1 ENST00000660090.1 |
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| CDS CAA 90 bp | TTCACTTATCTTATGGAATTGCTGAGAGGTCTCCATGGGCATTTATaGCAGACAGCCCTTCCTTTGAAGGGCTGGAGCTATCTTCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: FTYLMELLRGLHGHL*QTALPLKGWSYLPE Trigger: CTCAGGAAGATAGCTCCAGCCCTTCAAAGGAAGGGCTGTCTGCAATAAATGCCCATGGAGACCTCTCAGCAATTCCATAAGATAAGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000505861.3 ENST00000659991.1 ENST00000661072.1 |
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| CDS TCA 72 bp | GACTTCTCTGCTGCGTGCTCTGGGGCTTTCATTCTGTaGTCTATGGCAGTTATGTTTTCTTTGGGAACACAG | + |
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Preference number: 6 (lower is better) Translates to: DFSAACSGAFIL*SMAVMFSLGTQ Trigger: CTGTGTTCCCAAAGAAAACATAACTGCCATAGATCACAGAATGAAAGCCCCAGAGCACGCAGCAGAGAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000505861.3 ENST00000659991.1 ENST00000660090.1 |
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| CDS CCA 72 bp | CACCATGATGTGAAAGTTGGCTCCCAAAGGCCAACTTaGCTACAAAGAGAGACTCTCTTTCTCTACTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: HHDVKVGSQRPT*LQRETLFLYSR Trigger: CCTTGAGTAGAGAAAGAGAGTCTCTCTTTGTAGCCAAGTTGGCCTTTGGGAGCCAACTTTCACATCATGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660090.1 |
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| CDS CAA 90 bp | AAACTCTTATTCTGGAATATCACTCTGCAGCTAGCTGTCTTCAAGTaGTCGCCACTGTCCAAATATTTATGTGCAGGTGATGGGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: KLLFWNITLQLAVFK*SPLSKYLCAGDGPS Trigger: GGAGGGCCCATCACCTGCACATAAATATTTGGACAGTGGCGACAACTTGAAGACAGCTAGCTGCAGAGTGATATTCCAGAATAAGAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000505861.3 ENST00000659991.1 ENST00000660090.1 |
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| CDS CCA 72 bp | ATTCACTTATCTTATGGAATTGCTGAGAGGTCTCCATaGGCATTTATTGCAGACAGCCCTTCCTTTGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: IHLSYGIAERSP*AFIADSPSFEG Trigger: CCCTTCAAAGGAAGGGCTGTCTGCAATAAATGCCCATGGAGACCTCTCAGCAATTCCATAAGATAAGTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000505861.3 ENST00000659991.1 ENST00000661072.1 |
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| CDS CAA 72 bp | TTCTGGAATATCACTCTGCAGCTAGCTGTCTTCAAGTaGTCGCCACTGTCCAAATATTTATGTGCAGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: FWNITLQLAVFK*SPLSKYLCAGD Trigger: ATCACCTGCACATAAATATTTGGACAGTGGCGACAACTTGAAGACAGCTAGCTGCAGAGTGATATTCCAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000505861.3 ENST00000659991.1 ENST00000660090.1 |
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| CDS CAA 90 bp | AACTGCAAAACATTTGATTTAAGCCAATTCACTTATCTTATGGAATaGCTGAGAGGTCTCCATGGGCATTTATTGCAGACAGCCCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: NCKTFDLSQFTYLME*LRGLHGHLLQTALP Trigger: AGGAAGGGCTGTCTGCAATAAATGCCCATGGAGACCTCTCAGCAATTCCATAAGATAAGTGAATTGGCTTAAATCAAATGTTTTGCAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000505861.3 ENST00000659991.1 ENST00000661072.1 |
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| CDS TCA 72 bp | TTTAAAAACTCAGATTGTTCTTCTGCCCCGAAATCTTaGGAACCACTGACTTATGTGGTCAGAAGTGATCGA | + |
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Preference number: 6 (lower is better) Translates to: FKNSDCSSAPKS*EPLTYVVRSDR Trigger: TCGATCACTTCTGACCACATAAGTCAGTGGTTCTCAAGATTTCGGGGCAGAAGAACAATCTGAGTTTTTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660090.1 |
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| CDS TCA 72 bp | TCTCTTTCTCTACTCAAGGAGGTGTTTCTCATAGTCTaGTCCAATGAATACCTGCTTAGTAACTGTCACTGT | + |
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Preference number: 6 (lower is better) Translates to: SLSLLKEVFLIV*SNEYLLSNCHC Trigger: ACAGTGACAGTTACTAAGCAGGTATTCATTGGATCAGACTATGAGAAACACCTCCTTGAGTAGAGAAAGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660090.1 |
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| CDS CCA 72 bp | TCACCTTCTTGCAAGATCATCAGTAGATATTCCATATaGGAGACATTGTCCATTTTTGAAAGGCGGCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: SPSCKIISRYSI*ETLSIFERRQE Trigger: TTCTTGCCGCCTTTCAAAAATGGACAATGTCTCCCATATGGAATATCTACTGATGATCTTGCAAGAAGGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000505861.3 ENST00000659991.1 ENST00000661072.1 |
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| CDS CAA 72 bp | TGCAAGATCATCAGTAGATATTCCATATGGGAGACATaGTCCATTTTTGAAAGGCGGCAAGAACAATGTTGT | + |
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Preference number: 6 (lower is better) Translates to: CKIISRYSIWET*SIFERRQEQCC Trigger: ACAACATTGTTCTTGCCGCCTTTCAAAAATGGACAATGTCTCCCATATGGAATATCTACTGATGATCTTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000505861.3 ENST00000659991.1 ENST00000661072.1 |
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| CDS CAA 90 bp | TCACCTTCTTGCAAGATCATCAGTAGATATTCCATATGGGAGACATaGTCCATTTTTGAAAGGCGGCAAGAACAATGTTGTATAACTGTA | + |
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Preference number: 6 (lower is better) Translates to: SPSCKIISRYSIWET*SIFERRQEQCCITV Trigger: TACAGTTATACAACATTGTTCTTGCCGCCTTTCAAAAATGGACAATGTCTCCCATATGGAATATCTACTGATGATCTTGCAAGAAGGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000505861.3 ENST00000659991.1 ENST00000661072.1 |
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| CDS TCA 72 bp | CCTAATGAATCAGAATATCTGGAATGTGTGGGAAGCTaGCTCAAGCATATGCATCTTTTAAAAACTCAGATT | + |
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Preference number: 6 (lower is better) Translates to: PNESEYLECVGS*LKHMHLLKTQI Trigger: AATCTGAGTTTTTAAAAGATGCATATGCTTGAGTCAGCTTCCCACACATTCCAGATATTCTGATTCATTAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660090.1 |
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