Pregenerated sensors for LINC02097 (Homo sapiens)
Ensembl gene IDs: ENSG00000226101Ensembl transcript IDs: ENST00000419257.1, ENST00000654175.1, ENST00000665568.1, ENST00000666489.1
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCAGAGGCTGCCCCATGTGTGCGAAAGACCACCGTTCCTGGGCTGTaGCTGCAGCCTCTGTTTCCGTTAGCCTTTCCGTACGGCAGTGTT | + |
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Preference number: 5 (lower is better) Translates to: AEAAPCVRKTTVPGL*LQPLFPLAFPYGSV Trigger: AACACTGCCGTACGGAAAGGCTAACGGAAACAGAGGCTGCAGCCACAGCCCAGGAACGGTGGTCTTTCGCACACATGGGGCAGCCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419257.1 ENST00000666489.1 |
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| CDS CCA 90 bp | AGTTGTGGCAGAGGCTGCCCCATGTGTGCGAAAGACCACCGTTCCTaGGCTGTGGCTGCAGCCTCTGTTTCCGTTAGCCTTTCCGTACGG | + |
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Preference number: 5 (lower is better) Translates to: SCGRGCPMCAKDHRS*AVAAASVSVSLSVR Trigger: CCGTACGGAAAGGCTAACGGAAACAGAGGCTGCAGCCACAGCCCAGGAACGGTGGTCTTTCGCACACATGGGGCAGCCTCTGCCACAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000419257.1 ENST00000665568.1 ENST00000666489.1 |
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| CDS CCA 90 bp | GCTTGGGCACTGGGAAGTTCTCAGGATCCTTGGTTTGGTTACCACTaGGGTCTCAGCAGTCCCAGGCCTATCTTGGAGGTGGTGAAATGT | + |
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Preference number: 5 (lower is better) Translates to: AWALGSSQDPWFGYH*GLSSPRPILEVVKC Trigger: ACATTTCACCACCTCCAAGATAGGCCTGGGACTGCTGAGACCCCAGTGGTAACCAAACCAAGGATCCTGAGAACTTCCCAGTGCCCAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654175.1 ENST00000665568.1 |
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| CDS CCA 90 bp | TTGTTTGCCAGCTTGGGCACTGGGAAGTTCTCAGGATCCTTGGTTTaGTTACCACTGGGGTCTCAGCAGTCCCAGGCCTATCTTGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: LFASLGTGKFSGSLV*LPLGSQQSQAYLGG Trigger: ACCTCCAAGATAGGCCTGGGACTGCTGAGACCCCAGTGGTAACCAAACCAAGGATCCTGAGAACTTCCCAGTGCCCAAGCTGGCAAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654175.1 ENST00000665568.1 |
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| CDS GCA 90 bp | GCATTTTCTTCTTTGGTGTCAGGGAGTCCAGCCAACCATAGCTGTTaGTGCAGCCTGGCCCTAACCTCAGAAGACTGCATGCTTTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: AFSSLVSGSPANHSC*CSLALTSEDCMLSP Trigger: TGGGGAAAGCATGCAGTCTTCTGAGGTTAGGGCCAGGCTGCAGCAACAGCTATGGTTGGCTGGACTCCCTGACACCAAAGAAGAAAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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| CDS GCA 90 bp | TTTTCTTCTTTGGTGTCAGGGAGTCCAGCCAACCATAGCTGTTGCTaGAGCCTGGCCCTAACCTCAGAAGACTGCATGCTTTCCCCACTT | + |
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Preference number: 5 (lower is better) Translates to: FSSLVSGSPANHSCC*SLALTSEDCMLSPL Trigger: AAGTGGGGAAAGCATGCAGTCTTCTGAGGTTAGGGCCAGGCTGCAGCAACAGCTATGGTTGGCTGGACTCCCTGACACCAAAGAAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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| CDS CCA 90 bp | TTCTTTTGTTTGCCAGCTTGGGCACTGGGAAGTTCTCAGGATCCTTaGTTTGGTTACCACTGGGGTCTCAGCAGTCCCAGGCCTATCTTG | + |
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Preference number: 5 (lower is better) Translates to: FFCLPAWALGSSQDP*FGYHWGLSSPRPIL Trigger: CAAGATAGGCCTGGGACTGCTGAGACCCCAGTGGTAACCAAACCAAGGATCCTGAGAACTTCCCAGTGCCCAAGCTGGCAAACAAAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654175.1 ENST00000665568.1 |
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| CDS CCA 90 bp | CAGTACTCCAGAAGGCTCCTTGAAAGCATACAGCATTTTCTTCTTTaGTGTCAGGGAGTCCAGCCAACCATAGCTGTTGCTGCAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: QYSRRLLESIQHFLL*CQGVQPTIAVAAAW Trigger: CCAGGCTGCAGCAACAGCTATGGTTGGCTGGACTCCCTGACACCAAAGAAGAAAATGCTGTATGCTTTCAAGGAGCCTTCTGGAGTACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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| CDS TCA 90 bp | TGCTCAGCTGAAGCTACCTGGAAGTGGGTACGTGCTATGAGTTCCTaGGCGACCATTTACCTTAGCTATAAGTCATTCTGCACGCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: CSAEATWKWVRAMSS*ATIYLSYKSFCTPG Trigger: TCCTGGCGTGCAGAATGACTTATAGCTAAGGTAAATGGTCGCTCAGGAACTCATAGCACGTACCCACTTCCAGGTAGCTTCAGCTGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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| CDS TCA 90 bp | CTCTGGTATGTCTTAGTAAGTTTCCCCCTCCTGGGAATAACCACCTaGGAAGAGCCCTGTAGTTTCCTGTTGCCCAAGATGAAGGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: LWYVLVSFPLLGITT*EEPCSFLLPKMKVV Trigger: CACCACCTTCATCTTGGGCAACAGGAAACTACAGGGCTCTTCTCAGGTGGTTATTCCCAGGAGGGGGAAACTTACTAAGACATACCAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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| CDS CCA 90 bp | GTGGAAGAGTTCCTGGCATCTAGTAAGTGCTCACTACAGGATAGTTaGATTGGCTGTCATGCCCACCACCATTTGAAGGCAAGCTCAAGC | + |
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Preference number: 5 (lower is better) Translates to: VEEFLASSKCSLQDS*IGCHAHHHLKASSS Trigger: GCTTGAGCTTGCCTTCAAATGGTGGTGGGCATGACAGCCAATCCAACTATCCTGTAGTGAGCACTTACTAGATGCCAGGAACTCTTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665568.1 |
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| CDS TCA 90 bp | GCTCACTACAGGATAGTTGGATTGGCTGTCATGCCCACCACCATTTaGAGGCAAGCTCAAGCTCAGAGCAGTAAAGAAACACATCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: AHYRIVGLAVMPTTI*RQAQAQSSKETHPE Trigger: CTCTGGATGTGTTTCTTTACTGCTCTGAGCTTGAGCTTGCCTTCAAATGGTGGTGGGCATGACAGCCAATCCAACTATCCTGTAGTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665568.1 |
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| CDS GCA 90 bp | GAGCCCTGTAGTTTCCTGTTGCCCAAGATGAAGGTGGTGGTTGGATaGTCTTCAGGAGTGATCAAGGTTAGGTTAACCCTCAAAAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: EPCSFLLPKMKVVVG*SSGVIKVRLTLKRL Trigger: AAGCCTTTTGAGGGTTAACCTAACCTTGATCACTCCTGAAGAGCATCCAACCACCACCTTCATCTTGGGCAACAGGAAACTACAGGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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| CDS CCA 90 bp | TGTGGGCTAACCCAAACAACACTCATGTTCTTTTGTTTGCCAGCTTaGGCACTGGGAAGTTCTCAGGATCCTTGGTTTGGTTACCACTGG | + |
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Preference number: 5 (lower is better) Translates to: CGLTQTTLMFFCLPA*ALGSSQDPWFGYHW Trigger: CCAGTGGTAACCAAACCAAGGATCCTGAGAACTTCCCAGTGCCCAAGCTGGCAAACAAAAGAACATGAGTGTTGTTTGGGTTAGCCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654175.1 |
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| CDS TCA 90 bp | TTTCCGTACGGCAGTGTTGTCAGGTCACCGATTCCAAATGTCAAATaGCCCAATAGTGAGCACGCAGTGGATTTGTCAGTGCTACCTAAG | + |
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Preference number: 5 (lower is better) Translates to: FPYGSVVRSPIPNVK*PNSEHAVDLSVLPK Trigger: CTTAGGTAGCACTGACAAATCCACTGCGTGCTCACTATTGGGTCATTTGACATTTGGAATCGGTGACCTGACAACACTGCCGTACGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419257.1 ENST00000666489.1 |
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| CDS TCA 90 bp | GTGCTGAATGCTCAGCTGAAGCTACCTGGAAGTGGGTACGTGCTATaGGTTCCTGAGCGACCATTTACCTTAGCTATAAGTCATTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: VLNAQLKLPGSGYVL*VPERPFTLAISHSA Trigger: TGCAGAATGACTTATAGCTAAGGTAAATGGTCGCTCAGGAACTCATAGCACGTACCCACTTCCAGGTAGCTTCAGCTGAGCATTCAGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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| CDS GCA 90 bp | ATGAAAAATAGTGTCCACCAGGGACTGACGTGGTTCAGGTACCATTaGTGCTTTGGGGTGGAACATTTCTACGAACAAGAGGTGAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: MKNSVHQGLTWFRYH*CFGVEHFYEQEVRE Trigger: CTCTCTCACCTCTTGTTCGTAGAAATGTTCCACCCCAAAGCAGCAATGGTACCTGAACCACGTCAGTCCCTGGTGGACACTATTTTTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419257.1 |
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| CDS GCA 90 bp | AGTGTCTTAGGTGAGGCTGGACTCTTCCTCCGAGAAGATCTGAAATaGAGTGAGCACTTTTGCTTGAAGACAGGGACTGATTTTGGTAGC | + |
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Preference number: 5 (lower is better) Translates to: SVLGEAGLFLREDLK*SEHFCLKTGTDFGS Trigger: GCTACCAAAATCAGTCCCTGTCTTCAAGCAAAAGTGCTCACTGCATTTCAGATCTTCTCGGAGGAAGAGTCCAGCCTCACCTAAGACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419257.1 |
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| CDS CCA 90 bp | GAGGCTTTGCCAGCTACACAGAAGATTGCTGTCCAAATAAAGCCTTaGTTTAGGGGTGCTGCCATTAGTGCTAGGCCACTGATAACAAAC | + |
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Preference number: 5 (lower is better) Translates to: EALPATQKIAVQIKP*FRGAAISARPLITN Trigger: GTTTGTTATCAGTGGCCTAGCACTAATGGCAGCACCCCTAAACCAAGGCTTTATTTGGACAGCAATCTTCTGTGTAGCTGGCAAAGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665568.1 |
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| CDS GCA 90 bp | GCTGGACTCTTCCTCCGAGAAGATCTGAAATGCAGTGAGCACTTTTaGTTGAAGACAGGGACTGATTTTGGTAGCATCCTTTGGTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: AGLFLREDLKCSEHF*LKTGTDFGSILWSL Trigger: AAGAGACCAAAGGATGCTACCAAAATCAGTCCCTGTCTTCAAGCAAAAGTGCTCACTGCATTTCAGATCTTCTCGGAGGAAGAGTCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419257.1 |
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| CDS GCA 90 bp | CAAATGTCAAATGACCCAATAGTGAGCACGCAGTGGATTTGTCAGTaGTACCTAAGGCTAGGTCAGGACAAAAGCTGCCATGACAATGTC | + |
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Preference number: 5 (lower is better) Translates to: QMSNDPIVSTQWICQ*YLRLGQDKSCHDNV Trigger: GACATTGTCATGGCAGCTTTTGTCCTGACCTAGCCTTAGGTAGCACTGACAAATCCACTGCGTGCTCACTATTGGGTCATTTGACATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419257.1 ENST00000666489.1 |
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| CDS GCA 90 bp | GCCAACCATAGCTGTTGCTGCAGCCTGGCCCTAACCTCAGAAGACTaGATGCTTTCCCCACTTTCAATATGCTTTCTGCATTTATTTTTC | + |
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Preference number: 5 (lower is better) Translates to: ANHSCCCSLALTSED*MLSPLSICFLHLFF Trigger: GAAAAATAAATGCAGAAAGCATATTGAAAGTGGGGAAAGCATGCAGTCTTCTGAGGTTAGGGCCAGGCTGCAGCAACAGCTATGGTTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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| CDS CCA 90 bp | TTCCTCAAGGTGTGTATGAAAAATAGTGTCCACCAGGGACTGACGTaGTTCAGGTACCATTGCTGCTTTGGGGTGGAACATTTCTACGAA | + |
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Preference number: 5 (lower is better) Translates to: FLKVCMKNSVHQGLT*FRYHCCFGVEHFYE Trigger: TTCGTAGAAATGTTCCACCCCAAAGCAGCAATGGTACCTGAACCACGTCAGTCCCTGGTGGACACTATTTTTCATACACACCTTGAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419257.1 |
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| CDS CCA 90 bp | TCATCTCTAACCCAAACAACACTCATGTTCTTTTGTTTGCCAGCTTaGGCACTGGGAAGTTCTCAGGATCCTTGGTTTGGTTACCACTGG | + |
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Preference number: 5 (lower is better) Translates to: SSLTQTTLMFFCLPA*ALGSSQDPWFGYHW Trigger: CCAGTGGTAACCAAACCAAGGATCCTGAGAACTTCCCAGTGCCCAAGCTGGCAAACAAAAGAACATGAGTGTTGTTTGGGTTAGAGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665568.1 |
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| CDS TCA 90 bp | AAGGCCAGGACAATGAGAAGTGCTTATTACAGTCTGTGTTCTGTATaGCTGTGTGCTGATTGGGTGCCCTCTGCAAAAATGTTGCCACTA | + |
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Preference number: 5 (lower is better) Translates to: KARTMRSAYYSLCSV*LCADWVPSAKMLPL Trigger: TAGTGGCAACATTTTTGCAGAGGGCACCCAATCAGCACACAGTCATACAGAACACAGACTGTAATAAGCACTTCTCATTGTCCTGGCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665568.1 |
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| CDS TCA 90 bp | ACAAACTCAGATGCTAAAAGAATGGTGTGTAGAAGGCCAGGACAATaGGAAGTGCTTATTACAGTCTGTGTTCTGTATGACTGTGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: TNSDAKRMVCRRPGQ*EVLITVCVLYDCVL Trigger: CAGCACACAGTCATACAGAACACAGACTGTAATAAGCACTTCTCATTGTCCTGGCCTTCTACACACCATTCTTTTAGCATCTGAGTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665568.1 |
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| CDS CCA 90 bp | AGGTTCATTAGTCACATAAACAGCTTTGGTGCAGATTCATTCCAGTaGCATTTCTTGGTGACGAGAATGTATACTGAGTGTTTGGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: RFISHINSFGADSFQ*HFLVTRMYTECLAA Trigger: AGCTGCCAAACACTCAGTATACATTCTCGTCACCAAGAAATGCCACTGGAATGAATCTGCACCAAAGCTGTTTATGTGACTAATGAACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654175.1 |
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| CDS TCA 90 bp | AATGAGAAGTGCTTATTACAGTCTGTGTTCTGTATGACTGTGTGCTaGTTGGGTGCCCTCTGCAAAAATGTTGCCACTATTGATAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: NEKCLLQSVFCMTVC*LGALCKNVATIDKN Trigger: ATTCTTATCAATAGTGGCAACATTTTTGCAGAGGGCACCCAATCAGCACACAGTCATACAGAACACAGACTGTAATAAGCACTTCTCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665568.1 |
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| CDS CCA 72 bp | TTGCCAGCTTGGGCACTGGGAAGTTCTCAGGATCCTTaGTTTGGTTACCACTGGGGTCTCAGCAGTCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LPAWALGSSQDP*FGYHWGLSSPR Trigger: CCTGGGACTGCTGAGACCCCAGTGGTAACCAAACCAAGGATCCTGAGAACTTCCCAGTGCCCAAGCTGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654175.1 ENST00000665568.1 |
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| CDS CAA 72 bp | CAGCTTGGGCACTGGGAAGTTCTCAGGATCCTTGGTTaGGTTACCACTGGGGTCTCAGCAGTCCCAGGCCTA | + |
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Preference number: 6 (lower is better) Translates to: QLGHWEVLRILG*VTTGVSAVPGL Trigger: TAGGCCTGGGACTGCTGAGACCCCAGTGGTAACCAAACCAAGGATCCTGAGAACTTCCCAGTGCCCAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654175.1 ENST00000665568.1 |
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| CDS GCA 72 bp | TTGGTGTCAGGGAGTCCAGCCAACCATAGCTGTTGCTaGAGCCTGGCCCTAACCTCAGAAGACTGCATGCTT | + |
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Preference number: 6 (lower is better) Translates to: LVSGSPANHSCC*SLALTSEDCML Trigger: AAGCATGCAGTCTTCTGAGGTTAGGGCCAGGCTGCAGCAACAGCTATGGTTGGCTGGACTCCCTGACACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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| CDS GCA 72 bp | TCTTTGGTGTCAGGGAGTCCAGCCAACCATAGCTGTTaGTGCAGCCTGGCCCTAACCTCAGAAGACTGCATG | + |
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Preference number: 6 (lower is better) Translates to: SLVSGSPANHSC*CSLALTSEDCM Trigger: CATGCAGTCTTCTGAGGTTAGGGCCAGGCTGCAGCAACAGCTATGGTTGGCTGGACTCCCTGACACCAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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| CDS CCA 72 bp | AGCTTGGGCACTGGGAAGTTCTCAGGATCCTTGGTTTaGTTACCACTGGGGTCTCAGCAGTCCCAGGCCTAT | + |
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Preference number: 6 (lower is better) Translates to: SLGTGKFSGSLV*LPLGSQQSQAY Trigger: ATAGGCCTGGGACTGCTGAGACCCCAGTGGTAACCAAACCAAGGATCCTGAGAACTTCCCAGTGCCCAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654175.1 ENST00000665568.1 |
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| CDS CAA 72 bp | TTTGCCAGCTTGGGCACTGGGAAGTTCTCAGGATCCTaGGTTTGGTTACCACTGGGGTCTCAGCAGTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: FASLGTGKFSGS*VWLPLGSQQSQ Trigger: CTGGGACTGCTGAGACCCCAGTGGTAACCAAACCAAGGATCCTGAGAACTTCCCAGTGCCCAAGCTGGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654175.1 ENST00000665568.1 |
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| CDS CAA 90 bp | TTTGTTTGCCAGCTTGGGCACTGGGAAGTTCTCAGGATCCTTGGTTaGGTTACCACTGGGGTCTCAGCAGTCCCAGGCCTATCTTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: FVCQLGHWEVLRILG*VTTGVSAVPGLSWR Trigger: CCTCCAAGATAGGCCTGGGACTGCTGAGACCCCAGTGGTAACCAAACCAAGGATCCTGAGAACTTCCCAGTGCCCAAGCTGGCAAACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654175.1 ENST00000665568.1 |
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| CDS CAA 72 bp | GGTTACCACTGGGGTCTCAGCAGTCCCAGGCCTATCTaGGAGGTGGTGAAATGTCAGGGGACTAAACCAACT | + |
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Preference number: 6 (lower is better) Translates to: GYHWGLSSPRPI*EVVKCQGTKPT Trigger: AGTTGGTTTAGTCCCCTGACATTTCACCACCTCCAAGATAGGCCTGGGACTGCTGAGACCCCAGTGGTAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654175.1 ENST00000665568.1 |
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| CDS CAA 90 bp | CCTTGGTTTGGTTACCACTGGGGTCTCAGCAGTCCCAGGCCTATCTaGGAGGTGGTGAAATGTCAGGGGACTAAACCAACTGCAAGCACA | + |
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Preference number: 6 (lower is better) Translates to: PWFGYHWGLSSPRPI*EVVKCQGTKPTAST Trigger: TGTGCTTGCAGTTGGTTTAGTCCCCTGACATTTCACCACCTCCAAGATAGGCCTGGGACTGCTGAGACCCCAGTGGTAACCAAACCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654175.1 ENST00000665568.1 |
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| CDS GCA 72 bp | GTCCACCAGGGACTGACGTGGTTCAGGTACCATTGCTaGTTTGGGGTGGAACATTTCTACGAACAAGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: VHQGLTWFRYHC*FGVEHFYEQEV Trigger: CACCTCTTGTTCGTAGAAATGTTCCACCCCAAAGCAGCAATGGTACCTGAACCACGTCAGTCCCTGGTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419257.1 |
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| CDS CAA 90 bp | GTTCTTTTGTTTGCCAGCTTGGGCACTGGGAAGTTCTCAGGATCCTaGGTTTGGTTACCACTGGGGTCTCAGCAGTCCCAGGCCTATCTT | + |
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Preference number: 6 (lower is better) Translates to: VLLFASLGTGKFSGS*VWLPLGSQQSQAYL Trigger: AAGATAGGCCTGGGACTGCTGAGACCCCAGTGGTAACCAAACCAAGGATCCTGAGAACTTCCCAGTGCCCAAGCTGGCAAACAAAAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654175.1 ENST00000665568.1 |
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| CDS CAA 90 bp | CCTTGCTGCTTCATAGGTGACAGGTCTTCAGAAGGTGAAGGACTGTaGTTTGCAGGGTGGACTTCAGTGACCTGCATGGAGCTTGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: PCCFIGDRSSEGEGL*FAGWTSVTCMELGK Trigger: TTTCCCAAGCTCCATGCAGGTCACTGAAGTCCACCCTGCAAACAACAGTCCTTCACCTTCTGAAGACCTGTCACCTATGAAGCAGCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419257.1 ENST00000666489.1 |
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| CDS GCA 72 bp | AGTGTCCACCAGGGACTGACGTGGTTCAGGTACCATTaGTGCTTTGGGGTGGAACATTTCTACGAACAAGAG | + |
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Preference number: 6 (lower is better) Translates to: SVHQGLTWFRYH*CFGVEHFYEQE Trigger: CTCTTGTTCGTAGAAATGTTCCACCCCAAAGCAGCAATGGTACCTGAACCACGTCAGTCCCTGGTGGACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419257.1 |
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| CDS CCA 72 bp | GTTTGCAGGGTGGACTTCAGTGACCTGCATGGAGCTTaGGAAACTTCACAGTTCCACTTTGAACTCCCCATG | + |
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Preference number: 6 (lower is better) Translates to: VCRVDFSDLHGA*ETSQFHFELPM Trigger: CATGGGGAGTTCAAAGTGGAACTGTGAAGTTTCCCAAGCTCCATGCAGGTCACTGAAGTCCACCCTGCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419257.1 ENST00000666489.1 |
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| CDS CAA 72 bp | CTCTGCGTGCTTCCTACAGCACCACAGGCAGTAGGCTaGGGTTTCCAGCCTGATTATCTACAATGGAGGATA | + |
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Preference number: 6 (lower is better) Translates to: LCVLPTAPQAVG*GFQPDYLQWRI Trigger: TATCCTCCATTGTAGATAATCAGGCTGGAAACCCAAGCCTACTGCCTGTGGTGCTGTAGGAAGCACGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665568.1 |
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| CDS CAA 72 bp | GACGTCCATCAGGCAGGTGCTAGGATGATTTCCACTTaGCAGATGAGAAGGTTGGGGCACAAAGGGGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: DVHQAGARMIST*QMRRLGHKGVD Trigger: ATCAACCCCTTTGTGCCCCAACCTTCTCATCTGCAAAGTGGAAATCATCCTAGCACCTGCCTGATGGACGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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| CDS TCA 72 bp | AAGGTGAAGGACTGTTGTTTGCAGGGTGGACTTCAGTaGCCTGCATGGAGCTTGGGAAACTTCACAGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: KVKDCCLQGGLQ*PAWSLGNFTVP Trigger: TGGAACTGTGAAGTTTCCCAAGCTCCATGCAGGTCACTGAAGTCCACCCTGCAAACAACAGTCCTTCACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419257.1 ENST00000666489.1 |
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| CDS TCA 72 bp | TACAGCACCACAGGCAGTAGGCTTGGGTTTCCAGCCTaGTTATCTACAATGGAGGATAACACTAGTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: YSTTGSRLGFPA*LSTMEDNTSAS Trigger: GGAGGCACTAGTGTTATCCTCCATTGTAGATAATCAGGCTGGAAACCCAAGCCTACTGCCTGTGGTGCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665568.1 |
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| CDS GCA 72 bp | GGTGAGGCTGGACTCTTCCTCCGAGAAGATCTGAAATaGAGTGAGCACTTTTGCTTGAAGACAGGGACTGAT | + |
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Preference number: 6 (lower is better) Translates to: GEAGLFLREDLK*SEHFCLKTGTD Trigger: ATCAGTCCCTGTCTTCAAGCAAAAGTGCTCACTGCATTTCAGATCTTCTCGGAGGAAGAGTCCAGCCTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419257.1 |
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| CDS GCA 72 bp | TGGGATGGAGTGAGAGATAAACCTGGGGAAATAGGCTaGGGTCAGACCAGAAAAAGCCTTCTCTGCGATGTT | + |
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Preference number: 6 (lower is better) Translates to: WDGVRDKPGEIG*GQTRKSLLCDV Trigger: AACATCGCAGAGAAGGCTTTTTCTGGTCTGACCGCAGCCTATTTCCCCAGGTTTATCTCTCACTCCATCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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| CDS TCA 72 bp | GCTCAGCTGAAGCTACCTGGAAGTGGGTACGTGCTATaGGTTCCTGAGCGACCATTTACCTTAGCTATAAGT | + |
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Preference number: 6 (lower is better) Translates to: AQLKLPGSGYVL*VPERPFTLAIS Trigger: ACTTATAGCTAAGGTAAATGGTCGCTCAGGAACTCATAGCACGTACCCACTTCCAGGTAGCTTCAGCTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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| CDS GCA 72 bp | AATGACCCAATAGTGAGCACGCAGTGGATTTGTCAGTaGTACCTAAGGCTAGGTCAGGACAAAAGCTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: NDPIVSTQWICQ*YLRLGQDKSCH Trigger: ATGGCAGCTTTTGTCCTGACCTAGCCTTAGGTAGCACTGACAAATCCACTGCGTGCTCACTATTGGGTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419257.1 ENST00000666489.1 |
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| CDS CCA 72 bp | GTGTGTATGAAAAATAGTGTCCACCAGGGACTGACGTaGTTCAGGTACCATTGCTGCTTTGGGGTGGAACAT | + |
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Preference number: 6 (lower is better) Translates to: VCMKNSVHQGLT*FRYHCCFGVEH Trigger: ATGTTCCACCCCAAAGCAGCAATGGTACCTGAACCACGTCAGTCCCTGGTGGACACTATTTTTCATACACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419257.1 |
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| CDS CCA 72 bp | GCTAGGAAGAACCCCGGTCTGTCTGTAACTGAAGCCTaGACTCTTCTCATCTCTAACCCAAACAACACTCAT | + |
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Preference number: 6 (lower is better) Translates to: ARKNPGLSVTEA*TLLISNPNNTH Trigger: ATGAGTGTTGTTTGGGTTAGAGATGAGAAGAGTCCAGGCTTCAGTTACAGACAGACCGGGGTTCTTCCTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665568.1 |
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| CDS CCA 72 bp | TTCCTGGCATCTAGTAAGTGCTCACTACAGGATAGTTaGATTGGCTGTCATGCCCACCACCATTTGAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: FLASSKCSLQDS*IGCHAHHHLKA Trigger: TGCCTTCAAATGGTGGTGGGCATGACAGCCAATCCAACTATCCTGTAGTGAGCACTTACTAGATGCCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665568.1 |
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| CDS CAA 90 bp | TTGTGGGCTAACCCAAACAACACTCATGTTCTTTTGTTTGCCAGCTaGGGCACTGGGAAGTTCTCAGGATCCTTGGTTTGGTTACCACTG | + |
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Preference number: 6 (lower is better) Translates to: LWANPNNTHVLLFAS*GTGKFSGSLVWLPL Trigger: CAGTGGTAACCAAACCAAGGATCCTGAGAACTTCCCAGTGCCCAAGCTGGCAAACAAAAGAACATGAGTGTTGTTTGGGTTAGCCCACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654175.1 |
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| CDS CAA 90 bp | GGAGTTAGTTGTGGGCTAACCCAAACAACACTCATGTTCTTTTGTTaGCCAGCTTGGGCACTGGGAAGTTCTCAGGATCCTTGGTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: GVSCGLTQTTLMFFC*PAWALGSSQDPWFG Trigger: ACCAAACCAAGGATCCTGAGAACTTCCCAGTGCCCAAGCTGGCAAACAAAAGAACATGAGTGTTGTTTGGGTTAGCCCACAACTAACTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654175.1 |
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| CDS CAA 90 bp | GCCTGGACTCTTCTCATCTCTAACCCAAACAACACTCATGTTCTTTaGTTTGCCAGCTTGGGCACTGGGAAGTTCTCAGGATCCTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: AWTLLISNPNNTHVL*FASLGTGKFSGSLV Trigger: AACCAAGGATCCTGAGAACTTCCCAGTGCCCAAGCTGGCAAACAAAAGAACATGAGTGTTGTTTGGGTTAGAGATGAGAAGAGTCCAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665568.1 |
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| CDS CAA 90 bp | CTCATCTCTAACCCAAACAACACTCATGTTCTTTTGTTTGCCAGCTaGGGCACTGGGAAGTTCTCAGGATCCTTGGTTTGGTTACCACTG | + |
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Preference number: 6 (lower is better) Translates to: LISNPNNTHVLLFAS*GTGKFSGSLVWLPL Trigger: CAGTGGTAACCAAACCAAGGATCCTGAGAACTTCCCAGTGCCCAAGCTGGCAAACAAAAGAACATGAGTGTTGTTTGGGTTAGAGATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665568.1 |
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| CDS CAA 90 bp | GGACTCTTCTCATCTCTAACCCAAACAACACTCATGTTCTTTTGTTaGCCAGCTTGGGCACTGGGAAGTTCTCAGGATCCTTGGTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: GLFSSLTQTTLMFFC*PAWALGSSQDPWFG Trigger: ACCAAACCAAGGATCCTGAGAACTTCCCAGTGCCCAAGCTGGCAAACAAAAGAACATGAGTGTTGTTTGGGTTAGAGATGAGAAGAGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665568.1 |
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| CDS TCA 72 bp | TTGAGTTCACTCAGTGGAGAACCCTGGCAGAATATCTaGAGGACCACACCAGCATTTTCTTGTAGAGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: LSSLSGEPWQNI*RTTPAFSCRAV Trigger: GACTGCTCTACAAGAAAATGCTGGTGTGGTCCTTCAGATATTCTGCCAGGGTTCTCCACTGAGTGAACTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419257.1 |
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| CDS TCA 72 bp | AGGATAGTTGGATTGGCTGTCATGCCCACCACCATTTaGAGGCAAGCTCAAGCTCAGAGCAGTAAAGAAACA | + |
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Preference number: 6 (lower is better) Translates to: RIVGLAVMPTTI*RQAQAQSSKET Trigger: TGTTTCTTTACTGCTCTGAGCTTGAGCTTGCCTTCAAATGGTGGTGGGCATGACAGCCAATCCAACTATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665568.1 |
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| CDS TCA 72 bp | GAAGCTACCTGGAAGTGGGTACGTGCTATGAGTTCCTaGGCGACCATTTACCTTAGCTATAAGTCATTCTGC | + |
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Preference number: 6 (lower is better) Translates to: EATWKWVRAMSS*ATIYLSYKSFC Trigger: GCAGAATGACTTATAGCTAAGGTAAATGGTCGCTCAGGAACTCATAGCACGTACCCACTTCCAGGTAGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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| CDS GCA 72 bp | GTCTCTTCTAGTCATGAGCATTTCTCGTCTGAAGATTaGCAAGCGATTCCTCCAGGACATTCCTCAAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: VSSSHEHFSSED*QAIPPGHSSRC Trigger: ACACCTTGAGGAATGTCCTGGAGGAATCGCTTGGCAATCTTCAGACGAGAAATGCTCATGACTAGAAGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419257.1 |
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| CDS GCA 72 bp | TGCTCTTCCCTGAAGTCAAAGACACCAGCATCTCTTTaGTCAGTCTTCTCTAGAAGCTGCAGATCAATGTGG | + |
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Preference number: 6 (lower is better) Translates to: CSSLKSKTPASL*SVFSRSCRSMW Trigger: CCACATTGATCTGCAGCTTCTAGAGAAGACTGAGCAAAGAGATGCTGGTGTCTTTGACTTCAGGGAAGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419257.1 ENST00000666489.1 |
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| CDS CCA 72 bp | CAACACTCATGTTCTTTTGTTTGCCAGCTTGGGCACTaGGAAGTTCTCAGGATCCTTGGTTTGGTTACCACT | + |
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Preference number: 6 (lower is better) Translates to: QHSCSFVCQLGH*EVLRILGLVTT Trigger: AGTGGTAACCAAACCAAGGATCCTGAGAACTTCCCAGTGCCCAAGCTGGCAAACAAAAGAACATGAGTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654175.1 ENST00000665568.1 |
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| CDS CCA 72 bp | ACCCAAACAACACTCATGTTCTTTTGTTTGCCAGCTTaGGCACTGGGAAGTTCTCAGGATCCTTGGTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: TQTTLMFFCLPA*ALGSSQDPWFG Trigger: ACCAAACCAAGGATCCTGAGAACTTCCCAGTGCCCAAGCTGGCAAACAAAAGAACATGAGTGTTGTTTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654175.1 ENST00000665568.1 |
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| CDS CAA 72 bp | TGGCATTTCTTGGTGACGAGAATGTATACTGAGTGTTaGGCAGCTCATGGAGGAGTTAGTTGTGGGCTAACC | + |
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Preference number: 6 (lower is better) Translates to: WHFLVTRMYTEC*AAHGGVSCGLT Trigger: GGTTAGCCCACAACTAACTCCTCCATGAGCTGCCAAACACTCAGTATACATTCTCGTCACCAAGAAATGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654175.1 |
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| CDS CAA 90 bp | TCATTCCAGTGGCATTTCTTGGTGACGAGAATGTATACTGAGTGTTaGGCAGCTCATGGAGGAGTTAGTTGTGGGCTAACCCAAACAACA | + |
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Preference number: 6 (lower is better) Translates to: SFQWHFLVTRMYTEC*AAHGGVSCGLTQTT Trigger: TGTTGTTTGGGTTAGCCCACAACTAACTCCTCCATGAGCTGCCAAACACTCAGTATACATTCTCGTCACCAAGAAATGCCACTGGAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654175.1 |
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| CDS CCA 72 bp | ATATTTCATGGGGCTCAGTTGCTAGGGTCAACCAATTaGGATAGAAGATCACAGGTAATGACTGCCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: IFHGAQLLGSTN*DRRSQVMTARK Trigger: CTTCCTGGCAGTCATTACCTGTGATCTTCTATCCCAATTGGTTGACCCTAGCAACTGAGCCCCATGAAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419257.1 ENST00000666489.1 |
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| CDS CAA 72 bp | CAGATGAGAAGGTTGGGGCACAAAGGGGTTGATAATTaGCATAACATCATACTGCTAGTAAGTGGCAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: QMRRLGHKGVDN*HNIILLVSGSA Trigger: AGCGCTGCCACTTACTAGCAGTATGATGTTATGCAAATTATCAACCCCTTTGTGCCCCAACCTTCTCATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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| CDS CAA 90 bp | AGTCACATAAACAGCTTTGGTGCAGATTCATTCCAGTGGCATTTCTaGGTGACGAGAATGTATACTGAGTGTTTGGCAGCTCATGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SHINSFGADSFQWHF*VTRMYTECLAAHGG Trigger: TCCTCCATGAGCTGCCAAACACTCAGTATACATTCTCGTCACCAAGAAATGCCACTGGAATGAATCTGCACCAAAGCTGTTTATGTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654175.1 |
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| CDS CAA 90 bp | TCCACTTTGCAGATGAGAAGGTTGGGGCACAAAGGGGTTGATAATTaGCATAACATCATACTGCTAGTAAGTGGCAGCGCTGATACTCAA | + |
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Preference number: 6 (lower is better) Translates to: STLQMRRLGHKGVDN*HNIILLVSGSADTQ Trigger: TTGAGTATCAGCGCTGCCACTTACTAGCAGTATGATGTTATGCAAATTATCAACCCCTTTGTGCCCCAACCTTCTCATCTGCAAAGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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| CDS CAA 90 bp | CATCAGGCAGGTGCTAGGATGATTTCCACTTTGCAGATGAGAAGGTaGGGGCACAAAGGGGTTGATAATTTGCATAACATCATACTGCTA | + |
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Preference number: 6 (lower is better) Translates to: HQAGARMISTLQMRR*GHKGVDNLHNIILL Trigger: TAGCAGTATGATGTTATGCAAATTATCAACCCCTTTGTGCCCCAACCTTCTCATCTGCAAAGTGGAAATCATCCTAGCACCTGCCTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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| CDS GCA 72 bp | TTCCTCCGAGAAGATCTGAAATGCAGTGAGCACTTTTaGTTGAAGACAGGGACTGATTTTGGTAGCATCCTT | + |
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Preference number: 6 (lower is better) Translates to: FLREDLKCSEHF*LKTGTDFGSIL Trigger: AAGGATGCTACCAAAATCAGTCCCTGTCTTCAAGCAAAAGTGCTCACTGCATTTCAGATCTTCTCGGAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419257.1 |
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| CDS GCA 72 bp | ATGAGAATGCTGGGTGGAATGCACCACTTTTCTTGCTaGAGGCCTAGAACCATATATTTCCCCATTCAAATG | + |
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Preference number: 6 (lower is better) Translates to: MRMLGGMHHFSC*RPRTIYFPIQM Trigger: CATTTGAATGGGGAAATATATGGTTCTAGGCCTGCAGCAAGAAAAGTGGTGCATTCCACCCAGCATTCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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| CDS GCA 72 bp | AGAATGAGAATGCTGGGTGGAATGCACCACTTTTCTTaGTGCAGGCCTAGAACCATATATTTCCCCATTCAA | + |
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Preference number: 6 (lower is better) Translates to: RMRMLGGMHHFS*CRPRTIYFPIQ Trigger: TTGAATGGGGAAATATATGGTTCTAGGCCTGCAGCAAGAAAAGTGGTGCATTCCACCCAGCATTCTCATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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| CDS CAA 90 bp | ACCATGCAGTGTTCGGAATTAAAAATCAGAACTCAAAGCAGTGCTTaGCAGAAGAGGCTTTGCCAGCTACACAGAAGATTGCTGTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: TMQCSELKIRTQSSA*QKRLCQLHRRLLSK Trigger: TTTGGACAGCAATCTTCTGTGTAGCTGGCAAAGCCTCTTCTGCAAAGCACTGCTTTGAGTTCTGATTTTTAATTCCGAACACTGCATGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665568.1 |
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| CDS TCA 72 bp | ACAATGAGAAGTGCTTATTACAGTCTGTGTTCTGTATaGCTGTGTGCTGATTGGGTGCCCTCTGCAAAAATG | + |
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Preference number: 6 (lower is better) Translates to: TMRSAYYSLCSV*LCADWVPSAKM Trigger: CATTTTTGCAGAGGGCACCCAATCAGCACACAGTCATACAGAACACAGACTGTAATAAGCACTTCTCATTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665568.1 |
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| CDS GCA 72 bp | AAAGAATGGTGTGTAGAAGGCCAGGACAATGAGAAGTaGTTATTACAGTCTGTGTTCTGTATGACTGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: KEWCVEGQDNEK*LLQSVFCMTVC Trigger: GCACACAGTCATACAGAACACAGACTGTAATAAGCACTTCTCATTGTCCTGGCCTTCTACACACCATTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665568.1 |
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| CDS CCA 72 bp | TCCAGGTATAAGAGAAAACATGGTGGGTTCTGGGAATaGCAGGTCAGTAAGATAATTAGAAAACAGAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SRYKRKHGGFWE*QVSKIIRKQKA Trigger: GGCCTTCTGTTTTCTAATTATCTTACTGACCTGCCATTCCCAGAACCCACCATGTTTTCTCTTATACCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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| CDS CAA 72 bp | AATCAGAACTCAAAGCAGTGCTTTGCAGAAGAGGCTTaGCCAGCTACACAGAAGATTGCTGTCCAAATAAAG | + |
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Preference number: 6 (lower is better) Translates to: NQNSKQCFAEEA*PATQKIAVQIK Trigger: CTTTATTTGGACAGCAATCTTCTGTGTAGCTGGCAAAGCCTCTTCTGCAAAGCACTGCTTTGAGTTCTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665568.1 |
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| CDS GCA 72 bp | GAAATAGGCTGCGGTCAGACCAGAAAAAGCCTTCTCTaGGATGTTAAAGACTTTGCAATTCATCTAAAACCA | + |
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Preference number: 6 (lower is better) Translates to: EIGCGQTRKSLL*DVKDFAIHLKP Trigger: TGGTTTTAGATGAATTGCAAAGTCTTTAACATCGCAGAGAAGGCTTTTTCTGGTCTGACCGCAGCCTATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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| CDS CCA 72 bp | AGTCACATAAACAGCTTTGGTGCAGATTCATTCCAGTaGCATTTCTTGGTGACGAGAATGTATACTGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: SHINSFGADSFQ*HFLVTRMYTEC Trigger: ACACTCAGTATACATTCTCGTCACCAAGAAATGCCACTGGAATGAATCTGCACCAAAGCTGTTTATGTGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654175.1 |
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| CDS CAA 72 bp | ATTCAGTCCACTAAATACATATTTCATGGGGCTCAGTaGCTAGGGTCAACCAATTGGGATAGAAGATCACAG | + |
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Preference number: 6 (lower is better) Translates to: IQSTKYIFHGAQ*LGSTNWDRRSQ Trigger: CTGTGATCTTCTATCCCAATTGGTTGACCCTAGCAACTGAGCCCCATGAAATATGTATTTAGTGGACTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419257.1 ENST00000666489.1 |
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| CDS CAA 72 bp | GGAAGAGAGGAGTGTAGTCCTGGACTTGTTTTAACCTaGGGAGTTCTTGTTGCTTTTTCTGATTCAATTGTC | + |
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Preference number: 6 (lower is better) Translates to: GREECSPGLVLT*GVLVAFSDSIV Trigger: GACAATTGAATCAGAAAAAGCAACAAGAACTCCCAAGGTTAAAACAAGTCCAGGACTACACTCCTCTCTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000419257.1 ENST00000666489.1 |
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| CDS CAA 90 bp | GTCCAATTCATTCAGTCCACTAAATACATATTTCATGGGGCTCAGTaGCTAGGGTCAACCAATTGGGATAGAAGATCACAGGTAATGACT | + |
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Preference number: 6 (lower is better) Translates to: VQFIQSTKYIFHGAQ*LGSTNWDRRSQVMT Trigger: AGTCATTACCTGTGATCTTCTATCCCAATTGGTTGACCCTAGCAACTGAGCCCCATGAAATATGTATTTAGTGGACTGAATGAATTGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419257.1 ENST00000666489.1 |
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| CDS CAA 90 bp | GGAATTAAAAATCAGAACTCAAAGCAGTGCTTTGCAGAAGAGGCTTaGCCAGCTACACAGAAGATTGCTGTCCAAATAAAGCCTTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: GIKNQNSKQCFAEEA*PATQKIAVQIKPWF Trigger: AAACCAAGGCTTTATTTGGACAGCAATCTTCTGTGTAGCTGGCAAAGCCTCTTCTGCAAAGCACTGCTTTGAGTTCTGATTTTTAATTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665568.1 |
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| CDS TCA 72 bp | AACCATATATTTCCCCATTCAAATGGCAAGAGCAGTTaGATGTTTTTATGTCCTAGCTCAGTACTCCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: NHIFPHSNGKSS*MFLCPSSVLQK Trigger: CTTCTGGAGTACTGAGCTAGGACATAAAAACATTCAACTGCTCTTGCCATTTGAATGGGGAAATATATGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666489.1 |
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