Pregenerated sensors for LINC02096 (Homo sapiens)
Ensembl gene IDs: ENSG00000238212Ensembl transcript IDs: ENST00000445035.3, ENST00000652815.1, ENST00000660746.1, ENST00000660966.1, ENST00000661145.1, ENST00000662040.1, ENST00000664152.1, ENST00000665225.1, ENST00000665893.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GACGTCGCTGGCAGGACCAGTCCAACAGCTGGAGATGTGAGTTGCTaGCTCACTGCACAGTCCCTCAAGCCCCAGGCTCCATGGGATGGA | + |
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Preference number: 5 (lower is better) Translates to: DVAGRTSPTAGDVSC*LTAQSLKPQAPWDG Trigger: TCCATCCCATGGAGCCTGGGGCTTGAGGGACTGTGCAGTGAGGCAGCAACTCACATCTCCAGCTGTTGGACTGGTCCTGCCAGCGACGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000664152.1 ENST00000665225.1 |
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| CDS GCA 90 bp | GCAGACGTCGCTGGCAGGACCAGTCCAACAGCTGGAGATGTGAGTTaGTGCCTCACTGCACAGTCCCTCAAGCCCCAGGCTCCATGGGAT | + |
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Preference number: 5 (lower is better) Translates to: ADVAGRTSPTAGDVS*CLTAQSLKPQAPWD Trigger: ATCCCATGGAGCCTGGGGCTTGAGGGACTGTGCAGTGAGGCAGCAACTCACATCTCCAGCTGTTGGACTGGTCCTGCCAGCGACGTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000664152.1 ENST00000665225.1 |
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| CDS TCA 90 bp | ACTGAGCAGACGTCGCTGGCAGGACCAGTCCAACAGCTGGAGATGTaGGTTGCTGCCTCACTGCACAGTCCCTCAAGCCCCAGGCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: TEQTSLAGPVQQLEM*VAASLHSPSSPRLH Trigger: ATGGAGCCTGGGGCTTGAGGGACTGTGCAGTGAGGCAGCAACTCACATCTCCAGCTGTTGGACTGGTCCTGCCAGCGACGTCTGCTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000664152.1 ENST00000665225.1 |
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| CDS CCA 90 bp | GCTGAGCTGGGGGAAGTGCTGCTTGTTCTACTGAGCAGACGTCGCTaGCAGGACCAGTCCAACAGCTGGAGATGTGAGTTGCTGCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: AELGEVLLVLLSRRR*QDQSNSWRCELLPH Trigger: GTGAGGCAGCAACTCACATCTCCAGCTGTTGGACTGGTCCTGCCAGCGACGTCTGCTCAGTAGAACAAGCAGCACTTCCCCCAGCTCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000664152.1 ENST00000665225.1 |
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| CDS CCA 90 bp | CTTGTTCTACTGAGCAGACGTCGCTGGCAGGACCAGTCCAACAGCTaGAGATGTGAGTTGCTGCCTCACTGCACAGTCCCTCAAGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: LVLLSRRRWQDQSNS*RCELLPHCTVPQAP Trigger: TGGGGCTTGAGGGACTGTGCAGTGAGGCAGCAACTCACATCTCCAGCTGTTGGACTGGTCCTGCCAGCGACGTCTGCTCAGTAGAACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000664152.1 ENST00000665225.1 |
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| CDS TCA 90 bp | AGAAATGAGACAGTGCTGAGCTGGGGGAAGTGCTGCTTGTTCTACTaGGCAGACGTCGCTGGCAGGACCAGTCCAACAGCTGGAGATGTG | + |
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Preference number: 5 (lower is better) Translates to: RNETVLSWGKCCLFY*ADVAGRTSPTAGDV Trigger: CACATCTCCAGCTGTTGGACTGGTCCTGCCAGCGACGTCTGCTCAGTAGAACAAGCAGCACTTCCCCCAGCTCAGCACTGTCTCATTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000664152.1 ENST00000665225.1 |
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| CDS GCA 90 bp | GTGCCACCTGCCATAGGAGACCAGGCCCTGGGTATTAAAATCCACTaGACTGCCTTCAGGAAACCTACCCATCCATGTAGAGTGACCACG | + |
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Preference number: 5 (lower is better) Translates to: VPPAIGDQALGIKIH*TAFRKPTHPCRVTT Trigger: CGTGGTCACTCTACATGGATGGGTAGGTTTCCTGAAGGCAGTGCAGTGGATTTTAATACCCAGGGCCTGGTCTCCTATGGCAGGTGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652815.1 |
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| CDS CCA 90 bp | GTGGACGCCACGGACCGTCGCGGTGAGTGTTACAATTCTTACATTTaGTGTGTCCAGAGTTTGTTCCTTCGGAGTCTGGAGTTTCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: VDATDRRGECYNSYI*CVQSLFLRSLEFLP Trigger: AGGAAGAAACTCCAGACTCCGAAGGAACAAACTCTGGACACACCAAATGTAAGAATTGTAACACTCACCGCGACGGTCCGTGGCGTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000662040.1 ENST00000664152.1 ENST00000665225.1 ENST00000665893.1 |
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| CDS GCA 90 bp | GCAAAGGAGAAAATGTTGGGTGAGGTTGGAGCATTGTCAGGGGCATaGAGGAATGTCAGTCATCCACAAGGCCTTGTCAGGTGGAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: AKEKMLGEVGALSGA*RNVSHPQGLVRWSF Trigger: AAAACTCCACCTGACAAGGCCTTGTGGATGACTGACATTCCTGCATGCCCCTGACAATGCTCCAACCTCACCCAACATTTTCTCCTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000661145.1 ENST00000662040.1 |
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| CDS CCA 90 bp | ATGCATCCAACCGAACAAAACAAGGAGGTGCAGCAGCTCTGGTTGTaGAGAGGTTTCTTGAGTGATGGGCTTTGCACTGTCTGCCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: MHPTEQNKEVQQLWL*RGFLSDGLCTVCLF Trigger: AAAGAGGCAGACAGTGCAAAGCCCATCACTCAAGAAACCTCTCCACAACCAGAGCTGCTGCACCTCCTTGTTTTGTTCGGTTGGATGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS GCA 90 bp | GTGCAGCAGCTCTGGTTGTGGAGAGGTTTCTTGAGTGATGGGCTTTaGACTGTCTGCCTCTTTGACATAGCTAAAGACATCTCACATCAG | + |
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Preference number: 5 (lower is better) Translates to: VQQLWLWRGFLSDGL*TVCLFDIAKDISHQ Trigger: CTGATGTGAGATGTCTTTAGCTATGTCAAAGAGGCAGACAGTGCAAAGCCCATCACTCAAGAAACCTCTCCACAACCAGAGCTGCTGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS CCA 90 bp | TCAGGGGCATGCAGGAATGTCAGTCATCCACAAGGCCTTGTCAGGTaGAGTTTTTGGGTGAATTTACTCTGGTCCAGGGTTTGGTTCTTA | + |
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Preference number: 5 (lower is better) Translates to: SGACRNVSHPQGLVR*SFWVNLLWSRVWFL Trigger: TAAGAACCAAACCCTGGACCAGAGTAAATTCACCCAAAAACTCCACCTGACAAGGCCTTGTGGATGACTGACATTCCTGCATGCCCCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000661145.1 ENST00000662040.1 |
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| CDS CCA 90 bp | TTAACAATGCATCCAACCGAACAAAACAAGGAGGTGCAGCAGCTCTaGTTGTGGAGAGGTTTCTTGAGTGATGGGCTTTGCACTGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: LTMHPTEQNKEVQQL*LWRGFLSDGLCTVC Trigger: GCAGACAGTGCAAAGCCCATCACTCAAGAAACCTCTCCACAACCAGAGCTGCTGCACCTCCTTGTTTTGTTCGGTTGGATGCATTGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS GCA 90 bp | CTCTGGTTGTGGAGAGGTTTCTTGAGTGATGGGCTTTGCACTGTCTaGCTCTTTGACATAGCTAAAGACATCTCACATCAGGCCTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: LWLWRGFLSDGLCTV*LFDIAKDISHQASF Trigger: GAAAGAGGCCTGATGTGAGATGTCTTTAGCTATGTCAAAGAGGCAGACAGTGCAAAGCCCATCACTCAAGAAACCTCTCCACAACCAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS CCA 90 bp | GATGGACAGAGAAGCATGGAAATATTAACGGTTGGGTGCTTATCGTaGGCCTCAGAAAATGCAATTCTCCCGGTTGTCCAGAGAACCAAG | + |
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Preference number: 5 (lower is better) Translates to: DGQRSMEILTVGCLS*ASENAILPVVQRTK Trigger: CTTGGTTCTCTGGACAACCGGGAGAATTGCATTTTCTGAGGCCCACGATAAGCACCCAACCGTTAATATTTCCATGCTTCTCTGTCCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000664152.1 ENST00000665225.1 |
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| CDS CCA 90 bp | CATAGCAAACATAAGGCATCTGTAGACACGCAAAGGAGAAAATGTTaGGTGAGGTTGGAGCATTGTCAGGGGCATGCAGGAATGTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: HSKHKASVDTQRRKC*VRLEHCQGHAGMSV Trigger: GACTGACATTCCTGCATGCCCCTGACAATGCTCCAACCTCACCCAACATTTTCTCCTTTGCGTGTCTACAGATGCCTTATGTTTGCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000661145.1 ENST00000662040.1 |
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| CDS TCA 90 bp | ATACAAATTGTTTACGGGTACGGAATACAGAGTTCTAGTCTTCTCTaGGCTCCTCTGTTCCTTGGAGTTTCCTTCTGGGACCCAAGACAC | + |
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Preference number: 5 (lower is better) Translates to: IQIVYGYGIQSSSLL*APLFLGVSFWDPRH Trigger: GTGTCTTGGGTCCCAGAAGGAAACTCCAAGGAACAGAGGAGCTCAGAGAAGACTAGAACTCTGTATTCCGTACCCGTAAACAATTTGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664152.1 |
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| CDS GCA 90 bp | CATGGAAATATTAACGGTTGGGTGCTTATCGTGGGCCTCAGAAAATaGAATTCTCCCGGTTGTCCAGAGAACCAAGGACTATTATTCCAC | + |
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Preference number: 5 (lower is better) Translates to: HGNINGWVLIVGLRK*NSPGCPENQGLLFH Trigger: GTGGAATAATAGTCCTTGGTTCTCTGGACAACCGGGAGAATTGCATTTTCTGAGGCCCACGATAAGCACCCAACCGTTAATATTTCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000664152.1 ENST00000665225.1 |
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| CDS GCA 90 bp | GACATGAGCATAGATTTAGTTATAGGAATGTTCACTGCCGTGCAGTaGGGTTTGGAGAGTGGAAATTTGGAAACCACTTACATTCCTGAC | + |
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Preference number: 5 (lower is better) Translates to: DMSIDLVIGMFTAVQ*GLESGNLETTYIPD Trigger: GTCAGGAATGTAAGTGGTTTCCAAATTTCCACTCTCCAAACCGCACTGCACGGCAGTGAACATTCCTATAACTAAATCTATGCTCATGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS CCA 90 bp | TCACTATTAATGGGTTGGTCATTGTTTATAGGCCTTTTCCGTGGATaGCACTTTAAAAGCGTTAAAGCCTTTAACACTGTTGCTGCTAGC | + |
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Preference number: 5 (lower is better) Translates to: SLLMGWSLFIGLFRG*HFKSVKAFNTVAAS Trigger: GCTAGCAGCAACAGTGTTAAAGGCTTTAACGCTTTTAAAGTGCCATCCACGGAAAAGGCCTATAAACAATGACCAACCCATTAATAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660966.1 |
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| CDS TCA 90 bp | AATCTGTATTTTGCTGGTTGCACTCTCGTGGTGTTAGGTATCTATTaGATTCCCTTGTATTTTTCCTGCCTCAGTCCTGAAATTAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: NLYFAGCTLVVLGIY*IPLYFSCLSPEISH Trigger: ATGGCTAATTTCAGGACTGAGGCAGGAAAAATACAAGGGAATTCAATAGATACCTAACACCACGAGAGTGCAACCAGCAAAATACAGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660966.1 |
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| CDS CCA 90 bp | TCAGTCCTGAAATTAGCCATTTCTCTGAGGTTTCTATGTGGGAAATaGTATTTAGAGCTCTTAATCTGGGTGCTCACTATTAATGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: SVLKLAISLRFLCGK*YLELLIWVLTINGL Trigger: CAACCCATTAATAGTGAGCACCCAGATTAAGAGCTCTAAATACCATTTCCCACATAGAAACCTCAGAGAAATGGCTAATTTCAGGACTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660966.1 ENST00000664152.1 |
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| CDS CCA 90 bp | AGAAAAAGTGTCAGACTCCAGATCTTGCCTAGCGAGGAATTTGTTTaGTTTGGACTTCATTCGATGTGTCAAGGAAACTGTTTATTGTCT | + |
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Preference number: 5 (lower is better) Translates to: RKSVRLQILPSEEFV*FGLHSMCQGNCLLS Trigger: AGACAATAAACAGTTTCCTTGACACATCGAATGAAGTCCAAACCAAACAAATTCCTCGCTAGGCAAGATCTGGAGTCTGACACTTTTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS CCA 90 bp | TCTCTGAGGTTTCTATGTGGGAAATGGTATTTAGAGCTCTTAATCTaGGTGCTCACTATTAATGGGTTGGTCATTGTTTATAGGCCTTTT | + |
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Preference number: 5 (lower is better) Translates to: SLRFLCGKWYLELLI*VLTINGLVIVYRPF Trigger: AAAAGGCCTATAAACAATGACCAACCCATTAATAGTGAGCACCCAGATTAAGAGCTCTAAATACCATTTCCCACATAGAAACCTCAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660966.1 ENST00000664152.1 |
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| CDS TCA 90 bp | TTTAAAAGCGTTAAAGCCTTTAACACTGTTGCTGCTAGCATCACTTaGTCATCAATACTTTTCCAAGGGAAATTAACCCATCCATGTAGA | + |
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Preference number: 5 (lower is better) Translates to: FKSVKAFNTVAASIT*SSILFQGKLTHPCR Trigger: TCTACATGGATGGGTTAATTTCCCTTGGAAAAGTATTGATGATCAAGTGATGCTAGCAGCAACAGTGTTAAAGGCTTTAACGCTTTTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000445035.3 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000664152.1 ENST00000665225.1 |
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| CDS CCA 90 bp | ACATATTTTCAACAGTATAATACTTCAAAGAGTACGTATTGCCAATaGGGCGAAAATCGGAACAACTTATCTAGAGGAAAGTGTGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: TYFQQYNTSKSTYCQ*GENRNNLSRGKCGK Trigger: TTTGCCACACTTTCCTCTAGATAAGTTGTTCCGATTTTCGCCCCATTGGCAATACGTACTCTTTGAAGTATTATACTGTTGAAAATATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS CAA 90 bp | AGCAGACGTCGCTGGCAGGACCAGTCCAACAGCTGGAGATGTGAGTaGCTGCCTCACTGCACAGTCCCTCAAGCCCCAGGCTCCATGGGA | + |
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Preference number: 6 (lower is better) Translates to: SRRRWQDQSNSWRCE*LPHCTVPQAPGSMG Trigger: TCCCATGGAGCCTGGGGCTTGAGGGACTGTGCAGTGAGGCAGCAACTCACATCTCCAGCTGTTGGACTGGTCCTGCCAGCGACGTCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000664152.1 ENST00000665225.1 |
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| CDS TCA 72 bp | ACGTCGCTGGCAGGACCAGTCCAACAGCTGGAGATGTaGGTTGCTGCCTCACTGCACAGTCCCTCAAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: TSLAGPVQQLEM*VAASLHSPSSP Trigger: GGGGCTTGAGGGACTGTGCAGTGAGGCAGCAACTCACATCTCCAGCTGTTGGACTGGTCCTGCCAGCGACGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000664152.1 ENST00000665225.1 |
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| CDS GCA 72 bp | GGCAGGACCAGTCCAACAGCTGGAGATGTGAGTTGCTaGCTCACTGCACAGTCCCTCAAGCCCCAGGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: GRTSPTAGDVSC*LTAQSLKPQAP Trigger: TGGAGCCTGGGGCTTGAGGGACTGTGCAGTGAGGCAGCAACTCACATCTCCAGCTGTTGGACTGGTCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000664152.1 ENST00000665225.1 |
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| CDS CCA 72 bp | CTGAGCAGACGTCGCTGGCAGGACCAGTCCAACAGCTaGAGATGTGAGTTGCTGCCTCACTGCACAGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: LSRRRWQDQSNS*RCELLPHCTVP Trigger: AGGGACTGTGCAGTGAGGCAGCAACTCACATCTCCAGCTGTTGGACTGGTCCTGCCAGCGACGTCTGCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000664152.1 ENST00000665225.1 |
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| CDS TCA 72 bp | ACAGTGCTGAGCTGGGGGAAGTGCTGCTTGTTCTACTaGGCAGACGTCGCTGGCAGGACCAGTCCAACAGCT | + |
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Preference number: 6 (lower is better) Translates to: TVLSWGKCCLFY*ADVAGRTSPTA Trigger: AGCTGTTGGACTGGTCCTGCCAGCGACGTCTGCTCAGTAGAACAAGCAGCACTTCCCCCAGCTCAGCACTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000664152.1 ENST00000665225.1 |
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| CDS CCA 72 bp | GGGGAAGTGCTGCTTGTTCTACTGAGCAGACGTCGCTaGCAGGACCAGTCCAACAGCTGGAGATGTGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: GEVLLVLLSRRR*QDQSNSWRCEL Trigger: CAACTCACATCTCCAGCTGTTGGACTGGTCCTGCCAGCGACGTCTGCTCAGTAGAACAAGCAGCACTTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000664152.1 ENST00000665225.1 |
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| CDS TCA 72 bp | AGGAGGTGCAGCAGCTCTGGTTGTGGAGAGGTTTCTTaGGTGATGGGCTTTGCACTGTCTGCCTCTTTGACA | + |
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Preference number: 6 (lower is better) Translates to: RRCSSSGCGEVS*VMGFALSASLT Trigger: TGTCAAAGAGGCAGACAGTGCAAAGCCCATCACTCAAGAAACCTCTCCACAACCAGAGCTGCTGCACCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS CAA 72 bp | GCTTCAGGCAAGGCTGGAACCAGGGCTCCAACTAGGTaGGTAGAGTATCTTCTCTGCTCTGCTTCAGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: ASGKAGTRAPTR*VEYLLCSASVG Trigger: ACCAACTGAAGCAGAGCAGAGAAGATACTCTACCAACCTAGTTGGAGCCCTGGTTCCAGCCTTGCCTGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000445035.3 ENST00000660746.1 ENST00000665893.1 |
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| CDS CAA 72 bp | AAGGAGGTGCAGCAGCTCTGGTTGTGGAGAGGTTTCTaGAGTGATGGGCTTTGCACTGTCTGCCTCTTTGAC | + |
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Preference number: 6 (lower is better) Translates to: KEVQQLWLWRGF*SDGLCTVCLFD Trigger: GTCAAAGAGGCAGACAGTGCAAAGCCCATCACTCAAGAAACCTCTCCACAACCAGAGCTGCTGCACCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS GCA 72 bp | GCCATAGGAGACCAGGCCCTGGGTATTAAAATCCACTaGACTGCCTTCAGGAAACCTACCCATCCATGTAGA | + |
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Preference number: 6 (lower is better) Translates to: AIGDQALGIKIH*TAFRKPTHPCR Trigger: TCTACATGGATGGGTAGGTTTCCTGAAGGCAGTGCAGTGGATTTTAATACCCAGGGCCTGGTCTCCTATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652815.1 |
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| CDS GCA 72 bp | AAAATGTTGGGTGAGGTTGGAGCATTGTCAGGGGCATaGAGGAATGTCAGTCATCCACAAGGCCTTGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: KMLGEVGALSGA*RNVSHPQGLVR Trigger: CCTGACAAGGCCTTGTGGATGACTGACATTCCTGCATGCCCCTGACAATGCTCCAACCTCACCCAACATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000661145.1 ENST00000662040.1 |
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| CDS CCA 72 bp | ACCGAACAAAACAAGGAGGTGCAGCAGCTCTGGTTGTaGAGAGGTTTCTTGAGTGATGGGCTTTGCACTGTC | + |
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Preference number: 6 (lower is better) Translates to: TEQNKEVQQLWL*RGFLSDGLCTV Trigger: GACAGTGCAAAGCCCATCACTCAAGAAACCTCTCCACAACCAGAGCTGCTGCACCTCCTTGTTTTGTTCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS CCA 72 bp | CATCCAACCGAACAAAACAAGGAGGTGCAGCAGCTCTaGTTGTGGAGAGGTTTCTTGAGTGATGGGCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: HPTEQNKEVQQL*LWRGFLSDGLC Trigger: GCAAAGCCCATCACTCAAGAAACCTCTCCACAACCAGAGCTGCTGCACCTCCTTGTTTTGTTCGGTTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS CAA 72 bp | TGGAGTTTCTTCCTTCCGGTGGGTTCGTACACTCGCTaGATTTCAGGAGTGAAACCACAGACCTTCACCGTG | + |
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Preference number: 6 (lower is better) Translates to: WSFFLPVGSYTR*ISGVKPQTFTV Trigger: CACGGTGAAGGTCTGTGGTTTCACTCCTGAAATCAAGCGAGTGTACGAACCCACCGGAAGGAAGAAACTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000662040.1 ENST00000664152.1 ENST00000665225.1 ENST00000665893.1 |
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| CDS CAA 90 bp | ATCTGTAGACACGCAAAGGAGAAAATGTTGGGTGAGGTTGGAGCATaGTCAGGGGCATGCAGGAATGTCAGTCATCCACAAGGCCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: ICRHAKEKMLGEVGA*SGACRNVSHPQGLV Trigger: GACAAGGCCTTGTGGATGACTGACATTCCTGCATGCCCCTGACAATGCTCCAACCTCACCCAACATTTTCTCCTTTGCGTGTCTACAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000661145.1 ENST00000662040.1 |
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| CDS CCA 72 bp | ACGGACCGTCGCGGTGAGTGTTACAATTCTTACATTTaGTGTGTCCAGAGTTTGTTCCTTCGGAGTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: TDRRGECYNSYI*CVQSLFLRSLE Trigger: CTCCAGACTCCGAAGGAACAAACTCTGGACACACCAAATGTAAGAATTGTAACACTCACCGCGACGGTCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000662040.1 ENST00000664152.1 ENST00000665225.1 ENST00000665893.1 |
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| CDS CCA 72 bp | CATAAGGCATCTGTAGACACGCAAAGGAGAAAATGTTaGGTGAGGTTGGAGCATTGTCAGGGGCATGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: HKASVDTQRRKC*VRLEHCQGHAG Trigger: TCCTGCATGCCCCTGACAATGCTCCAACCTCACCCAACATTTTCTCCTTTGCGTGTCTACAGATGCCTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000661145.1 ENST00000662040.1 |
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| CDS CAA 72 bp | CACGCAAAGGAGAAAATGTTGGGTGAGGTTGGAGCATaGTCAGGGGCATGCAGGAATGTCAGTCATCCACAA | + |
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Preference number: 6 (lower is better) Translates to: HAKEKMLGEVGA*SGACRNVSHPQ Trigger: TTGTGGATGACTGACATTCCTGCATGCCCCTGACAATGCTCCAACCTCACCCAACATTTTCTCCTTTGCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000661145.1 ENST00000662040.1 |
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| CDS CAA 90 bp | TTCGGAGTCTGGAGTTTCTTCCTTCCGGTGGGTTCGTACACTCGCTaGATTTCAGGAGTGAAACCACAGACCTTCACCGTGAGTGTAATA | + |
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Preference number: 6 (lower is better) Translates to: FGVWSFFLPVGSYTR*ISGVKPQTFTVSVI Trigger: TATTACACTCACGGTGAAGGTCTGTGGTTTCACTCCTGAAATCAAGCGAGTGTACGAACCCACCGGAAGGAAGAAACTCCAGACTCCGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000662040.1 ENST00000664152.1 ENST00000665225.1 ENST00000665893.1 |
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| CDS CAA 90 bp | CATAAGGCATCTGTAGACACGCAAAGGAGAAAATGTTGGGTGAGGTaGGAGCATTGTCAGGGGCATGCAGGAATGTCAGTCATCCACAAG | + |
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Preference number: 6 (lower is better) Translates to: HKASVDTQRRKCWVR*EHCQGHAGMSVIHK Trigger: CTTGTGGATGACTGACATTCCTGCATGCCCCTGACAATGCTCCAACCTCACCCAACATTTTCTCCTTTGCGTGTCTACAGATGCCTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000661145.1 ENST00000662040.1 |
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| CDS GCA 72 bp | ATTAACGGTTGGGTGCTTATCGTGGGCCTCAGAAAATaGAATTCTCCCGGTTGTCCAGAGAACCAAGGACTA | + |
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Preference number: 6 (lower is better) Translates to: INGWVLIVGLRK*NSPGCPENQGL Trigger: TAGTCCTTGGTTCTCTGGACAACCGGGAGAATTGCATTTTCTGAGGCCCACGATAAGCACCCAACCGTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000664152.1 ENST00000665225.1 |
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| CDS CCA 72 bp | TGCAGGAATGTCAGTCATCCACAAGGCCTTGTCAGGTaGAGTTTTTGGGTGAATTTACTCTGGTCCAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: CRNVSHPQGLVR*SFWVNLLWSRV Trigger: AACCCTGGACCAGAGTAAATTCACCCAAAAACTCCACCTGACAAGGCCTTGTGGATGACTGACATTCCTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000661145.1 ENST00000662040.1 |
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| CDS CAA 72 bp | TTCCAAGGGAAATTAACAAAACGGATGTGTCCACAATaGGTTCCTTTCGGTGCGCTCTTGGTCTCGGCGACT | + |
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Preference number: 6 (lower is better) Translates to: FQGKLTKRMCPQ*VPFGALLVSAT Trigger: AGTCGCCGAGACCAAGAGCGCACCGAAAGGAACCAATTGTGGACACATCCGTTTTGTTAATTTCCCTTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000662040.1 ENST00000665893.1 |
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| CDS CAA 90 bp | CGGTTGGGTGCTTATCGTGGGCCTCAGAAAATGCAATTCTCCCGGTaGTCCAGAGAACCAAGGACTATTATTCCACTAAAACGGATGTGT | + |
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Preference number: 6 (lower is better) Translates to: RLGAYRGPQKMQFSR*SREPRTIIPLKRMC Trigger: ACACATCCGTTTTAGTGGAATAATAGTCCTTGGTTCTCTGGACAACCGGGAGAATTGCATTTTCTGAGGCCCACGATAAGCACCCAACCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000664152.1 ENST00000665225.1 |
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| CDS CAA 90 bp | ATGCAGGAATGTCAGTCATCCACAAGGCCTTGTCAGGTGGAGTTTTaGGGTGAATTTACTCTGGTCCAGGGTTTGGTTCTTAGCCTGACA | + |
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Preference number: 6 (lower is better) Translates to: MQECQSSTRPCQVEF*GEFTLVQGLVLSLT Trigger: TGTCAGGCTAAGAACCAAACCCTGGACCAGAGTAAATTCACCCAAAAACTCCACCTGACAAGGCCTTGTGGATGACTGACATTCCTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661145.1 ENST00000662040.1 |
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| CDS CAA 90 bp | GAACAAAACAAGGAGGTGCAGCAGCTCTGGTTGTGGAGAGGTTTCTaGAGTGATGGGCTTTGCACTGTCTGCCTCTTTGACATAGCTAAA | + |
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Preference number: 6 (lower is better) Translates to: EQNKEVQQLWLWRGF*SDGLCTVCLFDIAK Trigger: TTTAGCTATGTCAAAGAGGCAGACAGTGCAAAGCCCATCACTCAAGAAACCTCTCCACAACCAGAGCTGCTGCACCTCCTTGTTTTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS CCA 72 bp | AGAAGCATGGAAATATTAACGGTTGGGTGCTTATCGTaGGCCTCAGAAAATGCAATTCTCCCGGTTGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: RSMEILTVGCLS*ASENAILPVVQ Trigger: CTGGACAACCGGGAGAATTGCATTTTCTGAGGCCCACGATAAGCACCCAACCGTTAATATTTCCATGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000664152.1 ENST00000665225.1 |
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| CDS CCA 72 bp | GTCAGTCATCCACAAGGCCTTGTCAGGTGGAGTTTTTaGGTGAATTTACTCTGGTCCAGGGTTTGGTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: VSHPQGLVRWSF*VNLLWSRVWFL Trigger: TAAGAACCAAACCCTGGACCAGAGTAAATTCACCCAAAAACTCCACCTGACAAGGCCTTGTGGATGACTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000661145.1 ENST00000662040.1 |
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| CDS CAA 72 bp | TGTCAGTCATCCACAAGGCCTTGTCAGGTGGAGTTTTaGGGTGAATTTACTCTGGTCCAGGGTTTGGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: CQSSTRPCQVEF*GEFTLVQGLVL Trigger: AAGAACCAAACCCTGGACCAGAGTAAATTCACCCAAAAACTCCACCTGACAAGGCCTTGTGGATGACTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661145.1 ENST00000662040.1 |
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| CDS GCA 72 bp | CATGCTTCCAGTTTGGCAACCCTCATGGAAAGAAAATaGACTTTCCTAGTACTTCCTGCAAGTGTTCCATGC | + |
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Preference number: 6 (lower is better) Translates to: HASSLATLMERK*TFLVLPASVPC Trigger: GCATGGAACACTTGCAGGAAGTACTAGGAAAGTGCATTTTCTTTCCATGAGGGTTGCCAAACTGGAAGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000445035.3 ENST00000660746.1 ENST00000665893.1 |
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| CDS GCA 72 bp | TGGAGAGGTTTCTTGAGTGATGGGCTTTGCACTGTCTaGCTCTTTGACATAGCTAAAGACATCTCACATCAG | + |
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Preference number: 6 (lower is better) Translates to: WRGFLSDGLCTV*LFDIAKDISHQ Trigger: CTGATGTGAGATGTCTTTAGCTATGTCAAAGAGGCAGACAGTGCAAAGCCCATCACTCAAGAAACCTCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS CAA 72 bp | TTGGTAGAGTATCTTCTCTGCTCTGCTTCAGTTGGTTaGCTTTCTCAGACAATCTCACCCAATGTGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: LVEYLLCSASVG*LSQTISPNVAT Trigger: TGTGGCCACATTGGGTGAGATTGTCTGAGAAAGCAAACCAACTGAAGCAGAGCAGAGAAGATACTCTACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000445035.3 ENST00000660746.1 ENST00000665893.1 |
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| CDS CCA 72 bp | GTCAGACTCCAGATCTTGCCTAGCGAGGAATTTGTTTaGTTTGGACTTCATTCGATGTGTCAAGGAAACTGT | + |
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Preference number: 6 (lower is better) Translates to: VRLQILPSEEFV*FGLHSMCQGNC Trigger: ACAGTTTCCTTGACACATCGAATGAAGTCCAAACCAAACAAATTCCTCGCTAGGCAAGATCTGGAGTCTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS CAA 72 bp | GCTTATCGTGGGCCTCAGAAAATGCAATTCTCCCGGTaGTCCAGAGAACCAAGGACTATTATTCCACTAAAA | + |
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Preference number: 6 (lower is better) Translates to: AYRGPQKMQFSR*SREPRTIIPLK Trigger: TTTTAGTGGAATAATAGTCCTTGGTTCTCTGGACAACCGGGAGAATTGCATTTTCTGAGGCCCACGATAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000445035.3 ENST00000652815.1 ENST00000660746.1 ENST00000660966.1 ENST00000661145.1 ENST00000664152.1 ENST00000665225.1 |
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| CDS CAA 72 bp | TTCACTGCCGTGCAGTGCGGTTTGGAGAGTGGAAATTaGGAAACCACTTACATTCCTGACAAAATGAATTGC | + |
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Preference number: 6 (lower is better) Translates to: FTAVQCGLESGN*ETTYIPDKMNC Trigger: GCAATTCATTTTGTCAGGAATGTAAGTGGTTTCCAAATTTCCACTCTCCAAACCGCACTGCACGGCAGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS TCA 72 bp | TCTTTCACTGATCCCATTCACCAGGCTCCATCCTCATaGCCTAATCAACTCCCAAAAGTCTCACCTTTAAAA | + |
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Preference number: 6 (lower is better) Translates to: SFTDPIHQAPSS*PNQLPKVSPLK Trigger: TTTTAAAGGTGAGACTTTTGGGAGTTGATTAGGTCATGAGGATGGAGCCTGGTGAATGGGATCAGTGAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000660746.1 ENST00000661145.1 ENST00000662040.1 ENST00000664152.1 ENST00000665225.1 ENST00000665893.1 |
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| CDS TCA 72 bp | TTTGCTGGTTGCACTCTCGTGGTGTTAGGTATCTATTaGATTCCCTTGTATTTTTCCTGCCTCAGTCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: FAGCTLVVLGIY*IPLYFSCLSPE Trigger: TTCAGGACTGAGGCAGGAAAAATACAAGGGAATTCAATAGATACCTAACACCACGAGAGTGCAACCAGCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660966.1 |
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| CDS CAA 72 bp | GTGGAGTTTTTGGGTGAATTTACTCTGGTCCAGGGTTaGGTTCTTAGCCTGACAAGTTTAGAAACTTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: VEFLGEFTLVQG*VLSLTSLETCP Trigger: AGGACAAGTTTCTAAACTTGTCAGGCTAAGAACCAAACCCTGGACCAGAGTAAATTCACCCAAAAACTCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000661145.1 ENST00000662040.1 |
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| CDS CAA 72 bp | AAAGTGTCAGACTCCAGATCTTGCCTAGCGAGGAATTaGTTTGGTTTGGACTTCATTCGATGTGTCAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: KVSDSRSCLARN*FGLDFIRCVKE Trigger: TTCCTTGACACATCGAATGAAGTCCAAACCAAACAAATTCCTCGCTAGGCAAGATCTGGAGTCTGACACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS TCA 72 bp | CATAGTGCATCACCCATTGTTCTTGTGGGGAAGAAGTaGTGGCTAGATATTCTTGCAGACTCCAAAACAAAA | + |
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Preference number: 6 (lower is better) Translates to: HSASPIVLVGKK*WLDILADSKTK Trigger: TTTTGTTTTGGAGTCTGCAAGAATATCTAGCCATCACTTCTTCCCCACAAGAACAATGGGTGATGCACTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652815.1 |
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| CDS GCA 72 bp | GCCTTCATCCTACAGAACTTCCAAAAATCTGTATTTTaGTGGTTGCACTCTCGTGGTGTTAGGTATCTATTG | + |
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Preference number: 6 (lower is better) Translates to: AFILQNFQKSVF*WLHSRGVRYLL Trigger: CAATAGATACCTAACACCACGAGAGTGCAACCAGCAAAATACAGATTTTTGGAAGTTCTGTAGGATGAAGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660966.1 |
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| CDS GCA 72 bp | ATAGATTTAGTTATAGGAATGTTCACTGCCGTGCAGTaGGGTTTGGAGAGTGGAAATTTGGAAACCACTTAC | + |
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Preference number: 6 (lower is better) Translates to: IDLVIGMFTAVQ*GLESGNLETTY Trigger: GTAAGTGGTTTCCAAATTTCCACTCTCCAAACCGCACTGCACGGCAGTGAACATTCCTATAACTAAATCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS CAA 72 bp | GACTCCAGATCTTGCCTAGCGAGGAATTTGTTTGGTTaGGACTTCATTCGATGTGTCAAGGAAACTGTTTAT | + |
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Preference number: 6 (lower is better) Translates to: DSRSCLARNLFG*DFIRCVKETVY Trigger: ATAAACAGTTTCCTTGACACATCGAATGAAGTCCAAACCAAACAAATTCCTCGCTAGGCAAGATCTGGAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS CAA 90 bp | AGCATAGATTTAGTTATAGGAATGTTCACTGCCGTGCAGTGCGGTTaGGAGAGTGGAAATTTGGAAACCACTTACATTCCTGACAAAATG | + |
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Preference number: 6 (lower is better) Translates to: SIDLVIGMFTAVQCG*ESGNLETTYIPDKM Trigger: CATTTTGTCAGGAATGTAAGTGGTTTCCAAATTTCCACTCTCCAAACCGCACTGCACGGCAGTGAACATTCCTATAACTAAATCTATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS CAA 90 bp | AAAGTGTCAGACTCCAGATCTTGCCTAGCGAGGAATTTGTTTGGTTaGGACTTCATTCGATGTGTCAAGGAAACTGTTTATTGTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: KVSDSRSCLARNLFG*DFIRCVKETVYCLS Trigger: AGAAAGACAATAAACAGTTTCCTTGACACATCGAATGAAGTCCAAACCAAACAAATTCCTCGCTAGGCAAGATCTGGAGTCTGACACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS GCA 72 bp | AATGTCAATAACCTAATCAGGGCCTTGTATTTTTCCTaGCTCAGTCCTGAAATTAGCCATTTCTCTGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: NVNNLIRALYFS*LSPEISHFSEV Trigger: AACCTCAGAGAAATGGCTAATTTCAGGACTGAGGCAGGAAAAATACAAGGCCCTGATTAGGTTATTGACATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664152.1 |
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| CDS CCA 72 bp | ATGGGTTGGTCATTGTTTATAGGCCTTTTCCGTGGATaGCACTTTAAAAGCGTTAAAGCCTTTAACACTGTT | + |
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Preference number: 6 (lower is better) Translates to: MGWSLFIGLFRG*HFKSVKAFNTV Trigger: AACAGTGTTAAAGGCTTTAACGCTTTTAAAGTGCCATCCACGGAAAAGGCCTATAAACAATGACCAACCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660966.1 |
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| CDS CAA 90 bp | ATCAAAGAAAAAGTGTCAGACTCCAGATCTTGCCTAGCGAGGAATTaGTTTGGTTTGGACTTCATTCGATGTGTCAAGGAAACTGTTTAT | + |
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Preference number: 6 (lower is better) Translates to: IKEKVSDSRSCLARN*FGLDFIRCVKETVY Trigger: ATAAACAGTTTCCTTGACACATCGAATGAAGTCCAAACCAAACAAATTCCTCGCTAGGCAAGATCTGGAGTCTGACACTTTTTCTTTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS CCA 72 bp | CAACAGTATAATACTTCAAAGAGTACGTATTGCCAATaGGGCGAAAATCGGAACAACTTATCTAGAGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: QQYNTSKSTYCQ*GENRNNLSRGK Trigger: CTTTCCTCTAGATAAGTTGTTCCGATTTTCGCCCCATTGGCAATACGTACTCTTTGAAGTATTATACTGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665225.1 |
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| CDS CCA 72 bp | AAATTAGCCATTTCTCTGAGGTTTCTATGTGGGAAATaGTATTTAGAGCTCTTAATCTGGGTGCTCACTATT | + |
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Preference number: 6 (lower is better) Translates to: KLAISLRFLCGK*YLELLIWVLTI Trigger: AATAGTGAGCACCCAGATTAAGAGCTCTAAATACCATTTCCCACATAGAAACCTCAGAGAAATGGCTAATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660966.1 ENST00000664152.1 |
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| CDS CCA 72 bp | TTTCTATGTGGGAAATGGTATTTAGAGCTCTTAATCTaGGTGCTCACTATTAATGGGTTGGTCATTGTTTAT | + |
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Preference number: 6 (lower is better) Translates to: FLCGKWYLELLI*VLTINGLVIVY Trigger: ATAAACAATGACCAACCCATTAATAGTGAGCACCCAGATTAAGAGCTCTAAATACCATTTCCCACATAGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660966.1 ENST00000664152.1 |
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| CDS CAA 72 bp | ACAACCTGCTTGTGTGCCAGGTATGATTTATTGCATTaGAAACAACTTCTAAAGCCAAATGTTACAACCATT | + |
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Preference number: 6 (lower is better) Translates to: TTCLCARYDLLH*KQLLKPNVTTI Trigger: AATGGTTGTAACATTTGGCTTTAGAAGTTGTTTCAAATGCAATAAATCATACCTGGCACACAAGCAGGTTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652815.1 |
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