Pregenerated sensors for LINC02091 (Homo sapiens)
Ensembl gene IDs: ENSG00000273172, ENSG00000282365Ensembl transcript IDs: ENST00000576171.1, ENST00000633976.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CACCGAGAGCTGGCCGCTCCCTCCTGGCCTCTTGTCCTATGGGTCTaGTTTTTGGAGGATCGGCTCACGGCTCTTGGCTCTGCAGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: HRELAAPSWPLVLWV*FLEDRLTALGSAGA Trigger: AGCTCCTGCAGAGCCAAGAGCCGTGAGCCGATCCTCCAAAAACCAGACCCATAGGACAAGAGGCCAGGAGGGAGCGGCCAGCTCTCGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000633976.1 |
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| CDS CCA 90 bp | GCTCTGCAGGAGCTGGCTCTTGGGGAGGGCTTTGAAGAAGTCAGGTaGAGGGCCCAGCCTCCTAAGCATGGAGCCAGGGAACCCAAGGAT | + |
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Preference number: 5 (lower is better) Translates to: ALQELALGEGFEEVR*RAQPPKHGAREPKD Trigger: ATCCTTGGGTTCCCTGGCTCCATGCTTAGGAGGCTGGGCCCTCCACCTGACTTCTTCAAAGCCCTCCCCAAGAGCCAGCTCCTGCAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000576171.1 ENST00000633976.1 |
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| CDS CCA 90 bp | CTGGTTTTTGGAGGATCGGCTCACGGCTCTTGGCTCTGCAGGAGCTaGCTCTTGGGGAGGGCTTTGAAGAAGTCAGGTGGAGGGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LVFGGSAHGSWLCRS*LLGRALKKSGGGPS Trigger: GCTGGGCCCTCCACCTGACTTCTTCAAAGCCCTCCCCAAGAGCCAGCTCCTGCAGAGCCAAGAGCCGTGAGCCGATCCTCCAAAAACCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000633976.1 |
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| CDS CCA 90 bp | AGCTGGCCGCTCCCTCCTGGCCTCTTGTCCTATGGGTCTGGTTTTTaGAGGATCGGCTCACGGCTCTTGGCTCTGCAGGAGCTGGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: SWPLPPGLLSYGSGF*RIGSRLLALQELAL Trigger: AAGAGCCAGCTCCTGCAGAGCCAAGAGCCGTGAGCCGATCCTCCAAAAACCAGACCCATAGGACAAGAGGCCAGGAGGGAGCGGCCAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000633976.1 |
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| CDS CCA 90 bp | CTGGTTTTTGGAGGATCGGCTCATGGCTCTTGGCTCTGCAGGAGCTaGCTCTTGGGGAGGGCTTTGAAGAAGTCAGGTGGAGGGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LVFGGSAHGSWLCRS*LLGRALKKSGGGPS Trigger: GCTGGGCCCTCCACCTGACTTCTTCAAAGCCCTCCCCAAGAGCCAGCTCCTGCAGAGCCAAGAGCCATGAGCCGATCCTCCAAAAACCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000576171.1 |
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| CDS CCA 90 bp | AGCTGGCCGCTCTCTCCTGGCCTCTTGTCCTATGGGTCTGGTTTTTaGAGGATCGGCTCATGGCTCTTGGCTCTGCAGGAGCTGGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: SWPLSPGLLSYGSGF*RIGSWLLALQELAL Trigger: AAGAGCCAGCTCCTGCAGAGCCAAGAGCCATGAGCCGATCCTCCAAAAACCAGACCCATAGGACAAGAGGCCAGGAGAGAGCGGCCAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000576171.1 |
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| CDS CCA 90 bp | CCTGGCCTCTTGTCCTATGGGTCTGGTTTTTGGAGGATCGGCTCATaGCTCTTGGCTCTGCAGGAGCTGGCTCTTGGGGAGGGCTTTGAA | + |
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Preference number: 5 (lower is better) Translates to: PGLLSYGSGFWRIGS*LLALQELALGEGFE Trigger: TTCAAAGCCCTCCCCAAGAGCCAGCTCCTGCAGAGCCAAGAGCCATGAGCCGATCCTCCAAAAACCAGACCCATAGGACAAGAGGCCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000576171.1 |
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| CDS GCA 90 bp | GCAAAGAAATGTGAGTCTTTCTTCTATCCTGGGACACCAGAAGGCTaGCCAGGGCTCGGCAGAAGAACCAGGCTCTCTCCCTCCACACTG | + |
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Preference number: 5 (lower is better) Translates to: AKKCESFFYPGTPEG*PGLGRRTRLSPSTL Trigger: CAGTGTGGAGGGAGAGAGCCTGGTTCTTCTGCCGAGCCCTGGGCAGCCTTCTGGTGTCCCAGGATAGAAGAAAGACTCACATTTCTTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000576171.1 ENST00000633976.1 |
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| CDS CCA 90 bp | AGGATGCCCACTGGAGAAACACATGGCATGTTGGGGTCTACCCTTTaGCAGGTGGCAGAGTTGAAATCCACTCTAGGTCTGAATTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: RMPTGETHGMLGSTL*QVAELKSTLGLNLP Trigger: GGGCAAATTCAGACCTAGAGTGGATTTCAACTCTGCCACCTGCCAAAGGGTAGACCCCAACATGCCATGTGTTTCTCCAGTGGGCATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000576171.1 ENST00000633976.1 |
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| CDS CCA 90 bp | CCTGGGTCTCATCTAATGATGTTGTTTTGCAGATGTCAGATGCTCTaGTGCTGCAGTGATGGGCTCAATGGTGCAAAGAAATGTGAGTCT | + |
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Preference number: 5 (lower is better) Translates to: PGSHLMMLFCRCQML*CCSDGLNGAKKCES Trigger: AGACTCACATTTCTTTGCACCATTGAGCCCATCACTGCAGCACCAGAGCATCTGACATCTGCAAAACAACATCATTAGATGAGACCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000576171.1 ENST00000633976.1 |
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| CDS GCA 90 bp | GGGTCTCATCTAATGATGTTGTTTTGCAGATGTCAGATGCTCTGGTaGTGCAGTGATGGGCTCAATGGTGCAAAGAAATGTGAGTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: GSHLMMLFCRCQMLW*CSDGLNGAKKCESF Trigger: GAAAGACTCACATTTCTTTGCACCATTGAGCCCATCACTGCAGCACCAGAGCATCTGACATCTGCAAAACAACATCATTAGATGAGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000576171.1 ENST00000633976.1 |
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| CDS GCA 90 bp | AAGTTGTTTAACTTAGGCCCTGGGTCTCATCTAATGATGTTGTTTTaGAGATGTCAGATGCTCTGGTGCTGCAGTGATGGGCTCAATGGT | + |
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Preference number: 5 (lower is better) Translates to: KLFNLGPGSHLMMLF*RCQMLWCCSDGLNG Trigger: ACCATTGAGCCCATCACTGCAGCACCAGAGCATCTGACATCTGCAAAACAACATCATTAGATGAGACCCAGGGCCTAAGTTAAACAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000576171.1 ENST00000633976.1 |
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| CDS CAA 72 bp | AGGCTGGCCCTGAGGCTTGGCAGACCGGCTCCAGAATaGACACCCTTGACCACTGTCACCTACCCCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: RLALRLGRPAPE*TPLTTVTYPWP Trigger: GGGCCAGGGGTAGGTGACAGTGGTCAAGGGTGTCAATTCTGGAGCCGGTCTGCCAAGCCTCAGGGCCAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576171.1 |
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| CDS CAA 90 bp | AAGAAGCAGAGGCTGGCCCTGAGGCTTGGCAGACCGGCTCCAGAATaGACACCCTTGACCACTGTCACCTACCCCTGGCCCCGCGACAGT | + |
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Preference number: 6 (lower is better) Translates to: KKQRLALRLGRPAPE*TPLTTVTYPWPRDS Trigger: ACTGTCGCGGGGCCAGGGGTAGGTGACAGTGGTCAAGGGTGTCAATTCTGGAGCCGGTCTGCCAAGCCTCAGGGCCAGCCTCTGCTTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000576171.1 |
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| CDS CAA 90 bp | GAGCTGGCCGCTCCCTCCTGGCCTCTTGTCCTATGGGTCTGGTTTTaGGAGGATCGGCTCACGGCTCTTGGCTCTGCAGGAGCTGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: ELAAPSWPLVLWVWF*EDRLTALGSAGAGS Trigger: AGAGCCAGCTCCTGCAGAGCCAAGAGCCGTGAGCCGATCCTCCAAAAACCAGACCCATAGGACAAGAGGCCAGGAGGGAGCGGCCAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000633976.1 |
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| CDS CAA 72 bp | AGGCTGGCCCTGAGGCTTGGCAGACCGGCTCCAGAATaGACACCCTTGACCACTGTCACCTACCCCTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: RLALRLGRPAPE*TPLTTVTYPWP Trigger: AGGCCAGGGGTAGGTGACAGTGGTCAAGGGTGTCAATTCTGGAGCCGGTCTGCCAAGCCTCAGGGCCAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000633976.1 |
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| CDS CAA 90 bp | TTTGGAGGATCGGCTCACGGCTCTTGGCTCTGCAGGAGCTGGCTCTaGGGGAGGGCTTTGAAGAAGTCAGGTGGAGGGCCCAGCCTCCTA | + |
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Preference number: 6 (lower is better) Translates to: FGGSAHGSWLCRSWL*GRALKKSGGGPSLL Trigger: TAGGAGGCTGGGCCCTCCACCTGACTTCTTCAAAGCCCTCCCCAAGAGCCAGCTCCTGCAGAGCCAAGAGCCGTGAGCCGATCCTCCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000633976.1 |
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| CDS CCA 72 bp | GGAGGATCGGCTCACGGCTCTTGGCTCTGCAGGAGCTaGCTCTTGGGGAGGGCTTTGAAGAAGTCAGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: GGSAHGSWLCRS*LLGRALKKSGG Trigger: TCCACCTGACTTCTTCAAAGCCCTCCCCAAGAGCCAGCTCCTGCAGAGCCAAGAGCCGTGAGCCGATCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000633976.1 |
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| CDS CCA 72 bp | CTGGCCGCTCCCTCCTGGCCTCTTGTCCTATGGGTCTaGTTTTTGGAGGATCGGCTCACGGCTCTTGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LAAPSWPLVLWV*FLEDRLTALGS Trigger: AGAGCCAAGAGCCGTGAGCCGATCCTCCAAAAACCAGACCCATAGGACAAGAGGCCAGGAGGGAGCGGCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000633976.1 |
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| CDS CCA 72 bp | CGAGAGCTGGCCGCTCCCTCCTGGCCTCTTGTCCTATaGGTCTGGTTTTTGGAGGATCGGCTCACGGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: RELAAPSWPLVL*VWFLEDRLTAL Trigger: AAGAGCCGTGAGCCGATCCTCCAAAAACCAGACCCATAGGACAAGAGGCCAGGAGGGAGCGGCCAGCTCTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000633976.1 |
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| CDS CAA 90 bp | GAGCTGGCCGCTCTCTCCTGGCCTCTTGTCCTATGGGTCTGGTTTTaGGAGGATCGGCTCATGGCTCTTGGCTCTGCAGGAGCTGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: ELAALSWPLVLWVWF*EDRLMALGSAGAGS Trigger: AGAGCCAGCTCCTGCAGAGCCAAGAGCCATGAGCCGATCCTCCAAAAACCAGACCCATAGGACAAGAGGCCAGGAGAGAGCGGCCAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576171.1 |
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| CDS CAA 90 bp | AGGCTGGCCCTGAGGCTTGGCAGACCGGCTCCAGAATTGACACCCTaGACCACTGTCACCTACCCCTGGCCTGTGACAGTTACCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: RLALRLGRPAPELTP*TTVTYPWPVTVTCS Trigger: GGAACAGGTAACTGTCACAGGCCAGGGGTAGGTGACAGTGGTCAAGGGTGTCAATTCTGGAGCCGGTCTGCCAAGCCTCAGGGCCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000633976.1 |
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| CDS CCA 72 bp | GGAGGATCGGCTCATGGCTCTTGGCTCTGCAGGAGCTaGCTCTTGGGGAGGGCTTTGAAGAAGTCAGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: GGSAHGSWLCRS*LLGRALKKSGG Trigger: TCCACCTGACTTCTTCAAAGCCCTCCCCAAGAGCCAGCTCCTGCAGAGCCAAGAGCCATGAGCCGATCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576171.1 |
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| CDS CCA 72 bp | ATGGGTCTGGTTTTTGGAGGATCGGCTCACGGCTCTTaGCTCTGCAGGAGCTGGCTCTTGGGGAGGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: MGLVFGGSAHGS*LCRSWLLGRAL Trigger: CAAAGCCCTCCCCAAGAGCCAGCTCCTGCAGAGCCAAGAGCCGTGAGCCGATCCTCCAAAAACCAGACCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000633976.1 |
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| CDS CCA 72 bp | CTCCCTCCTGGCCTCTTGTCCTATGGGTCTGGTTTTTaGAGGATCGGCTCACGGCTCTTGGCTCTGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LPPGLLSYGSGF*RIGSRLLALQE Trigger: CTCCTGCAGAGCCAAGAGCCGTGAGCCGATCCTCCAAAAACCAGACCCATAGGACAAGAGGCCAGGAGGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000633976.1 |
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| CDS CAA 90 bp | AAGAAGCAGAGGCTGGCCCTGAGGCTTGGCAGACCGGCTCCAGAATaGACACCCTTGACCACTGTCACCTACCCCTGGCCTGTGACAGTT | + |
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Preference number: 6 (lower is better) Translates to: KKQRLALRLGRPAPE*TPLTTVTYPWPVTV Trigger: AACTGTCACAGGCCAGGGGTAGGTGACAGTGGTCAAGGGTGTCAATTCTGGAGCCGGTCTGCCAAGCCTCAGGGCCAGCCTCTGCTTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000633976.1 |
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| CDS GCA 72 bp | CTGGTTTTTGGAGGATCGGCTCACGGCTCTTGGCTCTaGAGGAGCTGGCTCTTGGGGAGGGCTTTGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: LVFGGSAHGSWL*RSWLLGRALKK Trigger: CTTCTTCAAAGCCCTCCCCAAGAGCCAGCTCCTGCAGAGCCAAGAGCCGTGAGCCGATCCTCCAAAAACCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000633976.1 |
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| CDS CCA 72 bp | ATGGGTCTGGTTTTTGGAGGATCGGCTCATGGCTCTTaGCTCTGCAGGAGCTGGCTCTTGGGGAGGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: MGLVFGGSAHGS*LCRSWLLGRAL Trigger: CAAAGCCCTCCCCAAGAGCCAGCTCCTGCAGAGCCAAGAGCCATGAGCCGATCCTCCAAAAACCAGACCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000576171.1 |
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| CDS CCA 72 bp | CTGGCCGCTCTCTCCTGGCCTCTTGTCCTATGGGTCTaGTTTTTGGAGGATCGGCTCATGGCTCTTGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LAALSWPLVLWV*FLEDRLMALGS Trigger: AGAGCCAAGAGCCATGAGCCGATCCTCCAAAAACCAGACCCATAGGACAAGAGGCCAGGAGAGAGCGGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000576171.1 |
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| CDS CCA 72 bp | CGAGAGCTGGCCGCTCTCTCCTGGCCTCTTGTCCTATaGGTCTGGTTTTTGGAGGATCGGCTCATGGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: RELAALSWPLVL*VWFLEDRLMAL Trigger: AAGAGCCATGAGCCGATCCTCCAAAAACCAGACCCATAGGACAAGAGGCCAGGAGAGAGCGGCCAGCTCTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000576171.1 |
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| CDS CAA 72 bp | GTGTTCACCGAGAGCTGGCCGCTCTCTCCTGGCCTCTaGTCCTATGGGTCTGGTTTTTGGAGGATCGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: VFTESWPLSPGL*SYGSGFWRIGS Trigger: TGAGCCGATCCTCCAAAAACCAGACCCATAGGACAAGAGGCCAGGAGAGAGCGGCCAGCTCTCGGTGAACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000576171.1 |
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| CDS CAA 72 bp | CTGAGGCTTGGCAGACCGGCTCCAGAATTGACACCCTaGACCACTGTCACCTACCCCTGGCCTGTGACAGTT | + |
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Preference number: 6 (lower is better) Translates to: LRLGRPAPELTP*TTVTYPWPVTV Trigger: AACTGTCACAGGCCAGGGGTAGGTGACAGTGGTCAAGGGTGTCAATTCTGGAGCCGGTCTGCCAAGCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000633976.1 |
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| CDS CAA 72 bp | TATGGGTCTGGTTTTTGGAGGATCGGCTCACGGCTCTaGGCTCTGCAGGAGCTGGCTCTTGGGGAGGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: YGSGFWRIGSRL*ALQELALGEGF Trigger: AAAGCCCTCCCCAAGAGCCAGCTCCTGCAGAGCCAAGAGCCGTGAGCCGATCCTCCAAAAACCAGACCCATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000633976.1 |
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| CDS GCA 72 bp | CTGGTTTTTGGAGGATCGGCTCATGGCTCTTGGCTCTaGAGGAGCTGGCTCTTGGGGAGGGCTTTGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: LVFGGSAHGSWL*RSWLLGRALKK Trigger: CTTCTTCAAAGCCCTCCCCAAGAGCCAGCTCCTGCAGAGCCAAGAGCCATGAGCCGATCCTCCAAAAACCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000576171.1 |
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| CDS CCA 72 bp | CTCTCTCCTGGCCTCTTGTCCTATGGGTCTGGTTTTTaGAGGATCGGCTCATGGCTCTTGGCTCTGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LSPGLLSYGSGF*RIGSWLLALQE Trigger: CTCCTGCAGAGCCAAGAGCCATGAGCCGATCCTCCAAAAACCAGACCCATAGGACAAGAGGCCAGGAGAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000576171.1 |
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| CDS CAA 72 bp | TATGGGTCTGGTTTTTGGAGGATCGGCTCATGGCTCTaGGCTCTGCAGGAGCTGGCTCTTGGGGAGGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: YGSGFWRIGSWL*ALQELALGEGF Trigger: AAAGCCCTCCCCAAGAGCCAGCTCCTGCAGAGCCAAGAGCCATGAGCCGATCCTCCAAAAACCAGACCCATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000576171.1 |
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| CDS CAA 72 bp | GCTCTCTCCTGGCCTCTTGTCCTATGGGTCTGGTTTTaGGAGGATCGGCTCATGGCTCTTGGCTCTGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: ALSWPLVLWVWF*EDRLMALGSAG Trigger: TCCTGCAGAGCCAAGAGCCATGAGCCGATCCTCCAAAAACCAGACCCATAGGACAAGAGGCCAGGAGAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576171.1 |
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| CDS CAA 90 bp | GAAACACATGGCATGTTGGGGTCTACCCTTTGGCAGGTGGCAGAGTaGAAATCCACTCTAGGTCTGAATTTGCCCAGCTCTGAGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: ETHGMLGSTLWQVAE*KSTLGLNLPSSEPS Trigger: GCTGGGCTCAGAGCTGGGCAAATTCAGACCTAGAGTGGATTTCAACTCTGCCACCTGCCAAAGGGTAGACCCCAACATGCCATGTGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000576171.1 ENST00000633976.1 |
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| CDS CAA 72 bp | AACCCAAGGATGCCCACTGGAGAAACACATGGCATGTaGGGGTCTACCCTTTGGCAGGTGGCAGAGTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: NPRMPTGETHGM*GSTLWQVAELK Trigger: TTTCAACTCTGCCACCTGCCAAAGGGTAGACCCCAACATGCCATGTGTTTCTCCAGTGGGCATCCTTGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000576171.1 ENST00000633976.1 |
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| CDS CAA 90 bp | AAGGATGCCCACTGGAGAAACACATGGCATGTTGGGGTCTACCCTTaGGCAGGTGGCAGAGTTGAAATCCACTCTAGGTCTGAATTTGCC | + |
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Preference number: 6 (lower is better) Translates to: KDAHWRNTWHVGVYP*AGGRVEIHSRSEFA Trigger: GGCAAATTCAGACCTAGAGTGGATTTCAACTCTGCCACCTGCCAAAGGGTAGACCCCAACATGCCATGTGTTTCTCCAGTGGGCATCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000576171.1 ENST00000633976.1 |
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| CDS CAA 90 bp | TTGGGCAAGTTGTTTAACTTAGGCCCTGGGTCTCATCTAATGATGTaGTTTTGCAGATGTCAGATGCTCTGGTGCTGCAGTGATGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LGKLFNLGPGSHLMM*FCRCQMLWCCSDGL Trigger: GAGCCCATCACTGCAGCACCAGAGCATCTGACATCTGCAAAACAACATCATTAGATGAGACCCAGGGCCTAAGTTAAACAACTTGCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000576171.1 ENST00000633976.1 |
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| CDS CCA 72 bp | CTGAACTGTCATTTTATCATTCCTTTACTAAGGAGCTaGAGGGTGTCGTCATCATCTTACAGATGGGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: LNCHFIIPLLRS*RVSSSSYRWGN Trigger: GTTTCCCCATCTGTAAGATGATGACGACACCCTCCAGCTCCTTAGTAAAGGAATGATAAAATGACAGTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000576171.1 ENST00000633976.1 |
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