Pregenerated sensors for LINC02086 (Homo sapiens)
Ensembl gene IDs: ENSG00000244649Ensembl transcript IDs: ENST00000478824.1, ENST00000492522.3, ENST00000575202.3, ENST00000628006.2, ENST00000628749.2, ENST00000629037.1, ENST00000669176.1
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGTTCCAGCTGCCCTGCCGGATGTGGGGCAGGCCCTCCCCAGTACTaGCTCTACAGCATGAAGCAACAGAGAGAGGCAGGGTCCTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: GSSCPAGCGAGPPQY*LYSMKQQREAGSSG Trigger: CCCAGAGGACCCTGCCTCTCTCTGTTGCTTCATGCTGTAGAGGCAGTACTGGGGAGGGCCTGCCCCACATCCGGCAGGGCAGCTGGAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000478824.1 ENST00000669176.1 |
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| CDS TCA 90 bp | CTGCCGGATGTGGGGCAGGCCCTCCCCAGTACTGCCTCTACAGCATaGAGCAACAGAGAGAGGCAGGGTCCTCTGGGCTTCCATGGATCT | + |
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Preference number: 5 (lower is better) Translates to: LPDVGQALPSTASTA*SNRERQGPLGFHGS Trigger: AGATCCATGGAAGCCCAGAGGACCCTGCCTCTCTCTGTTGCTTCATGCTGTAGAGGCAGTACTGGGGAGGGCCTGCCCCACATCCGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000478824.1 ENST00000669176.1 |
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| CDS GCA 90 bp | CTCCACATTGAGGGAGCAGAGTGTCATCAAACACATGGTTCCAGCTaGCCTGCCGGATGTGGGGCAGGCCCTCCCCAGTACTGCCTCTAC | + |
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Preference number: 5 (lower is better) Translates to: LHIEGAECHQTHGSS*PAGCGAGPPQYCLY Trigger: GTAGAGGCAGTACTGGGGAGGGCCTGCCCCACATCCGGCAGGGCAGCTGGAACCATGTGTTTGATGACACTCTGCTCCCTCAATGTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000478824.1 ENST00000669176.1 |
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| CDS CCA 90 bp | CCCTGGCTTCGAGTTCCTTCCTTAACAACTCTGGGGAGGTGTGGCTaGTACAGTCTTGGCTCCAGAATCTCCCTTCCTGGGTGGAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: PWLRVPSLTTLGRCG*YSLGSRISLPGWRG Trigger: CCCTCTCCACCCAGGAAGGGAGATTCTGGAGCCAAGACTGTACCAGCCACACCTCCCCAGAGTTGTTAAGGAAGGAACTCGAAGCCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000478824.1 ENST00000492522.3 ENST00000669176.1 |
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| CDS CCA 90 bp | CCACCCCTGGCTTCGAGTTCCTTCCTTAACAACTCTGGGGAGGTGTaGCTGGTACAGTCTTGGCTCCAGAATCTCCCTTCCTGGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: PPLASSSFLNNSGEV*LVQSWLQNLPSWVE Trigger: CTCCACCCAGGAAGGGAGATTCTGGAGCCAAGACTGTACCAGCCACACCTCCCCAGAGTTGTTAAGGAAGGAACTCGAAGCCAGGGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000478824.1 ENST00000492522.3 ENST00000669176.1 |
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| CDS CCA 90 bp | AGCAGAGTGTCATCAAACACATGGTTCCAGCTGCCCTGCCGGATGTaGGGCAGGCCCTCCCCAGTACTGCCTCTACAGCATGAAGCAACA | + |
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Preference number: 5 (lower is better) Translates to: SRVSSNTWFQLPCRM*GRPSPVLPLQHEAT Trigger: TGTTGCTTCATGCTGTAGAGGCAGTACTGGGGAGGGCCTGCCCCACATCCGGCAGGGCAGCTGGAACCATGTGTTTGATGACACTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000478824.1 ENST00000669176.1 |
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| CDS GCA 90 bp | TGGCAGAACATCCGATCTGCCTTTGCGGACCCAGCTGTCAAGGGCTaGACCGTGCCTGGATATGAGCTGTATTTGCCGAGATGTAGCATG | + |
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Preference number: 5 (lower is better) Translates to: WQNIRSAFADPAVKG*TVPGYELYLPRCSM Trigger: CATGCTACATCTCGGCAAATACAGCTCATATCCAGGCACGGTGCAGCCCTTGACAGCTGGGTCCGCAAAGGCAGATCGGATGTTCTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478824.1 |
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| CDS CCA 90 bp | AAACGGGTCTACCTGAGGGCTTCAGGGAAAACTTCCTTGAAGAGATaGCAGCTCGGCTGGACTGTGAAGGTTCAAGAGAGGTATGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: KRVYLRASGKTSLKR*QLGWTVKVQERYAS Trigger: GGAAGCATACCTCTCTTGAACCTTCACAGTCCAGCCGAGCTGCCATCTCTTCAAGGAAGTTTTCCCTGAAGCCCTCAGGTAGACCCGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628749.2 |
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| CDS CCA 90 bp | AGCAGTCAATACCTGTGGGGGTATCCAAGTAGCAATGTCCTCAGATaGCAACTCCACATGGTGGTCTGTCCAGCACTCCACTCTAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: SSQYLWGYPSSNVLR*QLHMVVCPALHSRL Trigger: AAGCCTAGAGTGGAGTGCTGGACAGACCACCATGTGGAGTTGCCATCTGAGGACATTGCTACTTGGATACCCCCACAGGTATTGACTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000629037.1 |
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| CDS CCA 90 bp | GTACTGCCTCTACAGCATGAAGCAACAGAGAGAGGCAGGGTCCTCTaGGCTTCCATGGATCTTCTCAGGACCCAATCCCAATTTATCTTC | + |
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Preference number: 5 (lower is better) Translates to: VLPLQHEATERGRVL*ASMDLLRTQSQFIF Trigger: GAAGATAAATTGGGATTGGGTCCTGAGAAGATCCATGGAAGCCCAGAGGACCCTGCCTCTCTCTGTTGCTTCATGCTGTAGAGGCAGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000478824.1 ENST00000669176.1 |
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| CDS TCA 90 bp | TACAGTCTTGGCTCCAGAATCTCCCTTCCTGGGTGGAGAGGGTTTTaGAAAGGAAGAGAGAGGGCTAGGGCAGGAGTTAAAGTTGGTGAT | + |
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Preference number: 5 (lower is better) Translates to: YSLGSRISLPGWRGF*KGRERARAGVKVGD Trigger: ATCACCAACTTTAACTCCTGCCCTAGCCCTCTCTCTTCCTTTTCAAAACCCTCTCCACCCAGGAAGGGAGATTCTGGAGCCAAGACTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000478824.1 ENST00000492522.3 ENST00000669176.1 |
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| CDS TCA 90 bp | TCCATGGATCTTCTCAGGACCCAATCCCAATTTATCTTCGGGAGTTaGTTTCCCAAGGGCAGGTACCCTTGGCAGCCTGAATCATGTGAC | + |
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Preference number: 5 (lower is better) Translates to: SMDLLRTQSQFIFGS*FPKGRYPWQPESCD Trigger: GTCACATGATTCAGGCTGCCAAGGGTACCTGCCCTTGGGAAATCAACTCCCGAAGATAAATTGGGATTGGGTCCTGAGAAGATCCATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000478824.1 ENST00000669176.1 |
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| CDS TCA 90 bp | ATCATTAGCTCCCTTGCCCAAATCTTCGGTTCTGCTGTAACAGCATaGTTCTTCTCCTCCTCTGGGAGGAGGCCATGGTGGGATAGAGAT | + |
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Preference number: 5 (lower is better) Translates to: IISSLAQIFGSAVTA*FFSSSGRRPWWDRD Trigger: ATCTCTATCCCACCATGGCCTCCTCCCAGAGGAGGAGAAGAATCATGCTGTTACAGCAGAACCGAAGATTTGGGCAAGGGAGCTAATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000492522.3 ENST00000629037.1 |
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| CDS CCA 90 bp | TACAGCATGAAGCAACAGAGAGAGGCAGGGTCCTCTGGGCTTCCATaGATCTTCTCAGGACCCAATCCCAATTTATCTTCGGGAGTTGAT | + |
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Preference number: 5 (lower is better) Translates to: YSMKQQREAGSSGLP*IFSGPNPNLSSGVD Trigger: ATCAACTCCCGAAGATAAATTGGGATTGGGTCCTGAGAAGATCCATGGAAGCCCAGAGGACCCTGCCTCTCTCTGTTGCTTCATGCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000478824.1 ENST00000669176.1 |
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| CDS TCA 90 bp | AAACCAACTCATATGTGGAGACTTCCAATTAAATGTGCTGCATGCTaGTGTGGCCGCCATGGAAAAACGGGTCTACCTGAGGGCTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: KPTHMWRLPIKCAAC*CGRHGKTGLPEGFR Trigger: CCTGAAGCCCTCAGGTAGACCCGTTTTTCCATGGCGGCCACATCAGCATGCAGCACATTTAATTGGAAGTCTCCACATATGAGTTGGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000575202.3 ENST00000628006.2 ENST00000628749.2 |
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| CDS GCA 90 bp | AAGATGCTAAGAAGGTCTGACTCTGATGGGCAACATCTTCCGAAATaGCAGTTGAATGGCTCTGTAGAGGCCCGCAGCTTCTTAGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: KMLRRSDSDGQHLPK*QLNGSVEARSFLVL Trigger: GAGAACTAAGAAGCTGCGGGCCTCTACAGAGCCATTCAACTGGCATTTCGGAAGATGTTGCCCATCAGAGTCAGACCTTCTTAGCATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000492522.3 ENST00000575202.3 ENST00000629037.1 |
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| CDS CCA 90 bp | CCACCACTCAGGATATGTATTGGAACAACCTCTCCTTTGTCCATCTaGCAAATGAAATCCCAGACAGACTGGTGCTTGGATACCATGGCG | + |
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Preference number: 5 (lower is better) Translates to: PPLRICIGTTSPLSI*QMKSQTDWCLDTMA Trigger: CGCCATGGTATCCAAGCACCAGTCTGTCTGGGATTTCATTTGCCAGATGGACAAAGGAGAGGTTGTTCCAATACATATCCTGAGTGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000492522.3 ENST00000629037.1 |
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| CDS CCA 90 bp | AAACGGGTCTACCTGAGGGCTTCAGGGAAAACTTCCTTGAAGAGATaGCAGCTCGGCTGGACTGTGAAGGTTCAAGAGAGGCTAATAATA | + |
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Preference number: 5 (lower is better) Translates to: KRVYLRASGKTSLKR*QLGWTVKVQERLII Trigger: TATTATTAGCCTCTCTTGAACCTTCACAGTCCAGCCGAGCTGCCATCTCTTCAAGGAAGTTTTCCCTGAAGCCCTCAGGTAGACCCGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000575202.3 ENST00000628006.2 |
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| CDS TCA 90 bp | GGGAGAAATCTGGCCTTAAGGATGGATGTTCAGTTCCAGAAAAGATaGGGCTCTCTGCTCCCCACTATGGACAGTTTCCATTCAATTGGC | + |
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Preference number: 5 (lower is better) Translates to: GRNLALRMDVQFQKR*GSLLPTMDSFHSIG Trigger: GCCAATTGAATGGAAACTGTCCATAGTGGGGAGCAGAGAGCCTCATCTTTTCTGGAACTGAACATCCATCCTTAAGGCCAGATTTCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000478824.1 ENST00000492522.3 ENST00000669176.1 |
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| CDS GCA 90 bp | AGACTGCCTGATTTGAAGTCTTCTGCTCTCCATTCTACCCTGAGGTaGACAATATTCACTATAGAGACAGGACCAGCCTTCATGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: RLPDLKSSALHSTLR*TIFTIETGPAFMRQ Trigger: CTGCCTCATGAAGGCTGGTCCTGTCTCTATAGTGAATATTGTGCACCTCAGGGTAGAATGGAGAGCAGAAGACTTCAAATCAGGCAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000492522.3 ENST00000575202.3 ENST00000628006.2 ENST00000628749.2 ENST00000629037.1 |
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| CDS CCA 90 bp | TGGATGTTCAGTTCCAGAAAAGATGAGGCTCTCTGCTCCCCACTATaGACAGTTTCCATTCAATTGGCAGAACATCCGATCTGCCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: WMFSSRKDEALCSPL*TVSIQLAEHPICLC Trigger: GCAAAGGCAGATCGGATGTTCTGCCAATTGAATGGAAACTGTCCATAGTGGGGAGCAGAGAGCCTCATCTTTTCTGGAACTGAACATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478824.1 |
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| CDS TCA 90 bp | GACAGCCATTTTGAGCAGCGGGACCCTGTTCCTCTGGTCCCAGTTTaGATTAACTGGGACAGAATTCCTTCCTATAAAATGTATAATAGA | + |
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Preference number: 5 (lower is better) Translates to: DSHFEQRDPVPLVPV*INWDRIPSYKMYNR Trigger: TCTATTATACATTTTATAGGAAGGAATTCTGTCCCAGTTAATTCAAACTGGGACCAGAGGAACAGGGTCCCGCTGCTCAAAATGGCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628006.2 |
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| CDS CCA 90 bp | AAGGAAAAATCCACAGTCCAAGAGATTCAGATCACTGAGTGTGGCTaGGGAAGACATGATCTCTATTTACTTCAGAGGACAAAGAGAATT | + |
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Preference number: 5 (lower is better) Translates to: KEKSTVQEIQITECG*GRHDLYLLQRTKRI Trigger: AATTCTCTTTGTCCTCTGAAGTAAATAGAGATCATGTCTTCCCCAGCCACACTCAGTGATCTGAATCTCTTGGACTGTGGATTTTTCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492522.3 |
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| CDS TCA 90 bp | AGTGGTTTAGACATCAGGGCTATTTTTGATGCTGTCCTGGACTTGTaGCATGGCAATATCCACAAAATGTCATTAGCCTATCAACTTTAT | + |
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Preference number: 5 (lower is better) Translates to: SGLDIRAIFDAVLDL*HGNIHKMSLAYQLY Trigger: ATAAAGTTGATAGGCTAATGACATTTTGTGGATATTGCCATGTCACAAGTCCAGGACAGCATCAAAAATAGCCCTGATGTCTAAACCACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000478824.1 ENST00000669176.1 |
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| CDS GCA 72 bp | TGCCCTGCCGGATGTGGGGCAGGCCCTCCCCAGTACTaGCTCTACAGCATGAAGCAACAGAGAGAGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: CPAGCGAGPPQY*LYSMKQQREAG Trigger: CCCTGCCTCTCTCTGTTGCTTCATGCTGTAGAGGCAGTACTGGGGAGGGCCTGCCCCACATCCGGCAGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000478824.1 ENST00000669176.1 |
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| CDS TCA 72 bp | GTGGGGCAGGCCCTCCCCAGTACTGCCTCTACAGCATaGAGCAACAGAGAGAGGCAGGGTCCTCTGGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: VGQALPSTASTA*SNRERQGPLGF Trigger: GAAGCCCAGAGGACCCTGCCTCTCTCTGTTGCTTCATGCTGTAGAGGCAGTACTGGGGAGGGCCTGCCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000478824.1 ENST00000669176.1 |
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| CDS GCA 72 bp | GAGGGAGCAGAGTGTCATCAAACACATGGTTCCAGCTaGCCTGCCGGATGTGGGGCAGGCCCTCCCCAGTAC | + |
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Preference number: 6 (lower is better) Translates to: EGAECHQTHGSS*PAGCGAGPPQY Trigger: GTACTGGGGAGGGCCTGCCCCACATCCGGCAGGGCAGCTGGAACCATGTGTTTGATGACACTCTGCTCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000478824.1 ENST00000669176.1 |
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| CDS GCA 72 bp | AGCAGAGTGTCATCAAACACATGGTTCCAGCTGCCCTaGCGGATGTGGGGCAGGCCCTCCCCAGTACTGCCT | + |
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Preference number: 6 (lower is better) Translates to: SRVSSNTWFQLP*RMWGRPSPVLP Trigger: AGGCAGTACTGGGGAGGGCCTGCCCCACATCCGGCAGGGCAGCTGGAACCATGTGTTTGATGACACTCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000478824.1 ENST00000669176.1 |
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| CDS CCA 72 bp | TCATCAAACACATGGTTCCAGCTGCCCTGCCGGATGTaGGGCAGGCCCTCCCCAGTACTGCCTCTACAGCAT | + |
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Preference number: 6 (lower is better) Translates to: SSNTWFQLPCRM*GRPSPVLPLQH Trigger: ATGCTGTAGAGGCAGTACTGGGGAGGGCCTGCCCCACATCCGGCAGGGCAGCTGGAACCATGTGTTTGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000478824.1 ENST00000669176.1 |
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| CDS CCA 72 bp | GCTGGTCCAGGAAATGAGGCAGGATCCAGGCCACTCTaGGCTCCGCGCAGCCTTCTTTTTCCAGGAAACTGC | + |
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Preference number: 6 (lower is better) Translates to: AGPGNEAGSRPL*APRSLLFPGNC Trigger: GCAGTTTCCTGGAAAAAGAAGGCTGCGCGGAGCCCAGAGTGGCCTGGATCCTGCCTCATTTCCTGGACCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000492522.3 ENST00000629037.1 |
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| CDS GCA 72 bp | ACCCGATCTGCCTTTGCGGACCCAGCTGTCAAGGGCTaGACCGTGCCTGGATATGAGCTGTATTTGCCGAGA | + |
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Preference number: 6 (lower is better) Translates to: TRSAFADPAVKG*TVPGYELYLPR Trigger: TCTCGGCAAATACAGCTCATATCCAGGCACGGTGCAGCCCTTGACAGCTGGGTCCGCAAAGGCAGATCGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492522.3 |
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| CDS CAA 72 bp | CCTCTGGGAGGAGGCCATGGTGGGATAGAGATGACCTaGTCCAAATGGTCTTGGGAAGTTTGGGCCCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: PLGGGHGGIEMT*SKWSWEVWAQP Trigger: CGGCTGGGCCCAAACTTCCCAAGACCATTTGGACAAGGTCATCTCTATCCCACCATGGCCTCCTCCCAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000492522.3 ENST00000575202.3 ENST00000629037.1 |
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| CDS CAA 72 bp | AGAAGAGAAGAAAGGTCTGGCAGCAACACTTTAAGCTaGCACCAGCCGCTCTGGGATCCGACGGCGCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: RREERSGSNTLS*HQPLWDPTAPW Trigger: CCACGGCGCCGTCGGATCCCAGAGCGGCTGGTGCAAGCTTAAAGTGTTGCTGCCAGACCTTTCTTCTCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628006.2 |
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| CDS CAA 90 bp | ACTCTGGGCTCCGCGCAGCCTTCTTTTTCCAGGAAACTGCTTGTCTaGGCTTTGGAGTGGCTTTCCCAGCCCATCTCTGACCTGACGCAG | + |
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Preference number: 6 (lower is better) Translates to: TLGSAQPSFSRKLLV*ALEWLSQPISDLTQ Trigger: CTGCGTCAGGTCAGAGATGGGCTGGGAAAGCCACTCCAAAGCCAAGACAAGCAGTTTCCTGGAAAAAGAAGGCTGCGCGGAGCCCAGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000492522.3 ENST00000629037.1 |
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| CDS GCA 72 bp | CTGCCTTTGCGGACCCAGCTGTCAAGGGCTGCACCGTaGCTGGATATGAGCTGTATTTGCCGAGATGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: LPLRTQLSRAAP*LDMSCICRDVA Trigger: TGCTACATCTCGGCAAATACAGCTCATATCCAGGCACGGTGCAGCCCTTGACAGCTGGGTCCGCAAAGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000478824.1 ENST00000492522.3 |
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| CDS GCA 72 bp | ATCCGATCTGCCTTTGCGGACCCAGCTGTCAAGGGCTaGACCGTGCCTGGATATGAGCTGTATTTGCCGAGA | + |
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Preference number: 6 (lower is better) Translates to: IRSAFADPAVKG*TVPGYELYLPR Trigger: TCTCGGCAAATACAGCTCATATCCAGGCACGGTGCAGCCCTTGACAGCTGGGTCCGCAAAGGCAGATCGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478824.1 |
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| CDS TCA 72 bp | GAAGGTTCAAGAGAGGTATGCTTCCCCGGCTGGTCTTaGACTCTTGGCCTCAATCCTCTTGCCTCAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: EGSREVCFPGWS*TLGLNPLASAS Trigger: GGAGGCTGAGGCAAGAGGATTGAGGCCAAGAGTTCAAGACCAGCCGGGGAAGCATACCTCTCTTGAACCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628749.2 |
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| CDS GCA 72 bp | AAACACATCTGTCCTGCTACTGGTAGTGGGGGTGCTTaGCAGAAGACCACCCCTGGCTTCGAGTTCCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: KHICPATGSGGA*QKTTPGFEFLP Trigger: AGGAAGGAACTCGAAGCCAGGGGTGGTCTTCTGGCAAGCACCCCCACTACCAGTAGCAGGACAGATGTGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000478824.1 ENST00000669176.1 |
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| CDS CCA 72 bp | CGAGTTCCTTCCTTAACAACTCTGGGGAGGTGTGGCTaGTACAGTCTTGGCTCCAGAATCTCCCTTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RVPSLTTLGRCG*YSLGSRISLPG Trigger: CCCAGGAAGGGAGATTCTGGAGCCAAGACTGTACCAGCCACACCTCCCCAGAGTTGTTAAGGAAGGAACTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000478824.1 ENST00000492522.3 ENST00000669176.1 |
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| CDS CAA 72 bp | TGGGCTCCGCGCAGCCTTCTTTTTCCAGGAAACTGCTaGTCTTGGCTTTGGAGTGGCTTTCCCAGCCCATCT | + |
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Preference number: 6 (lower is better) Translates to: WAPRSLLFPGNC*SWLWSGFPSPS Trigger: AGATGGGCTGGGAAAGCCACTCCAAAGCCAAGACAAGCAGTTTCCTGGAAAAAGAAGGCTGCGCGGAGCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000492522.3 ENST00000629037.1 |
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| CDS CCA 72 bp | TGGCTGGTACAGTCTTGGCTCCAGAATCTCCCTTCCTaGGTGGAGAGGGTTTTGAAAAGGAAGAGAGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: WLVQSWLQNLPS*VERVLKRKREG Trigger: GCCCTCTCTCTTCCTTTTCAAAACCCTCTCCACCCAGGAAGGGAGATTCTGGAGCCAAGACTGTACCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000478824.1 ENST00000492522.3 ENST00000669176.1 |
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| CDS CCA 72 bp | GCTTCGAGTTCCTTCCTTAACAACTCTGGGGAGGTGTaGCTGGTACAGTCTTGGCTCCAGAATCTCCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ASSSFLNNSGEV*LVQSWLQNLPS Trigger: GGAAGGGAGATTCTGGAGCCAAGACTGTACCAGCCACACCTCCCCAGAGTTGTTAAGGAAGGAACTCGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000478824.1 ENST00000492522.3 ENST00000669176.1 |
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| CDS CCA 72 bp | ACAGATGTGAGTCATCATGCCTGGCTGGGCGTCCTGTaGGGGTATCCAAGTAGCAATGTCCTCAGATGGCAA | + |
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Preference number: 6 (lower is better) Translates to: TDVSHHAWLGVL*GYPSSNVLRWQ Trigger: TTGCCATCTGAGGACATTGCTACTTGGATACCCCCACAGGACGCCCAGCCAGGCATGATGACTCACATCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628749.2 |
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| CDS CCA 72 bp | CAAGTAGCAATGTCCTCAGATGGCAACTCCACATGGTaGTCTGTCCAGCACTCCACTCTAGGCTTCCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: QVAMSSDGNSTW*SVQHSTLGFLW Trigger: CCAGAGGAAGCCTAGAGTGGAGTGCTGGACAGACCACCATGTGGAGTTGCCATCTGAGGACATTGCTACTTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629037.1 |
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| CDS CCA 72 bp | TACCTGTGGGGGTATCCAAGTAGCAATGTCCTCAGATaGCAACTCCACATGGTGGTCTGTCCAGCACTCCAC | + |
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Preference number: 6 (lower is better) Translates to: YLWGYPSSNVLR*QLHMVVCPALH Trigger: GTGGAGTGCTGGACAGACCACCATGTGGAGTTGCCATCTGAGGACATTGCTACTTGGATACCCCCACAGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000629037.1 |
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| CDS GCA 72 bp | AGAAGGTCTGACTCTGATGGGCAACATCTTCCGAAATaGCAGTTGAATGGCTCTGTAGAGGCCCGCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RRSDSDGQHLPK*QLNGSVEARSF Trigger: GAAGCTGCGGGCCTCTACAGAGCCATTCAACTGGCATTTCGGAAGATGTTGCCCATCAGAGTCAGACCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000492522.3 ENST00000575202.3 ENST00000629037.1 |
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| CDS CCA 72 bp | TCAGGGAAAACTTCCTTGAAGAGATGGCAGCTCGGCTaGACTGTGAAGGTTCAAGAGAGGTATGCTTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: SGKTSLKRWQLG*TVKVQERYASP Trigger: CGGGGAAGCATACCTCTCTTGAACCTTCACAGTCCAGCCGAGCTGCCATCTCTTCAAGGAAGTTTTCCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628749.2 |
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| CDS TCA 72 bp | CTTCTCAGGACCCAATCCCAATTTATCTTCGGGAGTTaGTTTCCCAAGGGCAGGTACCCTTGGCAGCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LLRTQSQFIFGS*FPKGRYPWQPE Trigger: TTCAGGCTGCCAAGGGTACCTGCCCTTGGGAAATCAACTCCCGAAGATAAATTGGGATTGGGTCCTGAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000478824.1 ENST00000669176.1 |
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| CDS CAA 72 bp | GCACTAGAATTGGGGTCTGAACCCAGACTGCCTGATTaGAAGTCTTCTGCTCTCCATTCTACCCTGAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: ALELGSEPRLPD*KSSALHSTLRC Trigger: GCACCTCAGGGTAGAATGGAGAGCAGAAGACTTCAAATCAGGCAGTCTGGGTTCAGACCCCAATTCTAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000492522.3 ENST00000575202.3 ENST00000628006.2 ENST00000628749.2 ENST00000629037.1 |
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| CDS CAA 90 bp | CTAAGAAGGTCTGACTCTGATGGGCAACATCTTCCGAAATGCCAGTaGAATGGCTCTGTAGAGGCCCGCAGCTTCTTAGTTCTCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LRRSDSDGQHLPKCQ*NGSVEARSFLVLSP Trigger: AGGAGAGAGAACTAAGAAGCTGCGGGCCTCTACAGAGCCATTCAACTGGCATTTCGGAAGATGTTGCCCATCAGAGTCAGACCTTCTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000492522.3 ENST00000575202.3 ENST00000629037.1 |
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| CDS CAA 72 bp | TCTGACTCTGATGGGCAACATCTTCCGAAATGCCAGTaGAATGGCTCTGTAGAGGCCCGCAGCTTCTTAGTT | + |
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Preference number: 6 (lower is better) Translates to: SDSDGQHLPKCQ*NGSVEARSFLV Trigger: AACTAAGAAGCTGCGGGCCTCTACAGAGCCATTCAACTGGCATTTCGGAAGATGTTGCCCATCAGAGTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000492522.3 ENST00000575202.3 ENST00000629037.1 |
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| CDS TCA 72 bp | CATATGTGGAGACTTCCAATTAAATGTGCTGCATGCTaGTGTGGCCGCCATGGAAAAACGGGTCTACCTGAG | + |
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Preference number: 6 (lower is better) Translates to: HMWRLPIKCAAC*CGRHGKTGLPE Trigger: CTCAGGTAGACCCGTTTTTCCATGGCGGCCACATCAGCATGCAGCACATTTAATTGGAAGTCTCCACATATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000575202.3 ENST00000628006.2 ENST00000628749.2 |
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| CDS GCA 72 bp | GGATGGATGTTCAGTTCCAGAAAAGATGAGGCTCTCTaGTCCCCACTATGGACAGTTTCCATTCAATTGGCA | + |
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Preference number: 6 (lower is better) Translates to: GWMFSSRKDEAL*SPLWTVSIQLA Trigger: TGCCAATTGAATGGAAACTGTCCATAGTGGGGAGCAGAGAGCCTCATCTTTTCTGGAACTGAACATCCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000478824.1 ENST00000492522.3 ENST00000669176.1 |
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| CDS CCA 72 bp | AGTTCCAGAAAAGATGAGGCTCTCTGCTCCCCACTATaGACAGTTTCCATTCAATTGGCAGAACATCCGATC | + |
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Preference number: 6 (lower is better) Translates to: SSRKDEALCSPL*TVSIQLAEHPI Trigger: GATCGGATGTTCTGCCAATTGAATGGAAACTGTCCATAGTGGGGAGCAGAGAGCCTCATCTTTTCTGGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478824.1 |
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| CDS CCA 72 bp | TCAGGGAAAACTTCCTTGAAGAGATGGCAGCTCGGCTaGACTGTGAAGGTTCAAGAGAGGCTAATAATAGAG | + |
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Preference number: 6 (lower is better) Translates to: SGKTSLKRWQLG*TVKVQERLIIE Trigger: CTCTATTATTAGCCTCTCTTGAACCTTCACAGTCCAGCCGAGCTGCCATCTCTTCAAGGAAGTTTTCCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000575202.3 ENST00000628006.2 |
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| CDS CAA 72 bp | CCACCACTCAGGATATGTATTGGAACAACCTCTCCTTaGTCCATCTGGCAAATGAAATCCCAGACAGACTGG | + |
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Preference number: 6 (lower is better) Translates to: PPLRICIGTTSP*SIWQMKSQTDW Trigger: CCAGTCTGTCTGGGATTTCATTTGCCAGATGGACAAAGGAGAGGTTGTTCCAATACATATCCTGAGTGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000492522.3 ENST00000629037.1 |
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| CDS TCA 72 bp | GGAGCTCATAATCCAGACATTTGGTTTGCATGCCAGTaGACATCTGGACACCGGAAAATATCTGGTTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: GAHNPDIWFACQ*TSGHRKISGLG Trigger: TCCCAAACCAGATATTTTCCGGTGTCCAGATGTTCACTGGCATGCAAACCAAATGTCTGGATTATGAGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492522.3 |
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| CDS TCA 72 bp | TTTGAGCAGCGGGACCCTGTTCCTCTGGTCCCAGTTTaGATTAACTGGGACAGAATTCCTTCCTATAAAATG | + |
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Preference number: 6 (lower is better) Translates to: FEQRDPVPLVPV*INWDRIPSYKM Trigger: CATTTTATAGGAAGGAATTCTGTCCCAGTTAATTCAAACTGGGACCAGAGGAACAGGGTCCCGCTGCTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628006.2 |
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| CDS GCA 72 bp | GATTTGAAGTCTTCTGCTCTCCATTCTACCCTGAGGTaGACAATATTCACTATAGAGACAGGACCAGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: DLKSSALHSTLR*TIFTIETGPAF Trigger: GAAGGCTGGTCCTGTCTCTATAGTGAATATTGTGCACCTCAGGGTAGAATGGAGAGCAGAAGACTTCAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000492522.3 ENST00000575202.3 ENST00000628006.2 ENST00000628749.2 ENST00000629037.1 |
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| CDS CCA 72 bp | CAATATCCACAAAATGTCATTAGCCTATCAACTTTATaGCAGGTGGCAGGGCTGCCCCTGCATAAGGTGATA | + |
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Preference number: 6 (lower is better) Translates to: QYPQNVISLSTL*QVAGLPLHKVI Trigger: TATCACCTTATGCAGGGGCAGCCCTGCCACCTGCCATAAAGTTGATAGGCTAATGACATTTTGTGGATATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000478824.1 ENST00000669176.1 |
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| CDS CCA 72 bp | TCCACAGTCCAAGAGATTCAGATCACTGAGTGTGGCTaGGGAAGACATGATCTCTATTTACTTCAGAGGACA | + |
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Preference number: 6 (lower is better) Translates to: STVQEIQITECG*GRHDLYLLQRT Trigger: TGTCCTCTGAAGTAAATAGAGATCATGTCTTCCCCAGCCACACTCAGTGATCTGAATCTCTTGGACTGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492522.3 |
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| CDS CCA 72 bp | AGTTCCAGAAAAGATGAGGCTCTCTGCTCCCCACTATaGACAGTTTCCATTCAATTGGCAGAACATCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: SSRKDEALCSPL*TVSIQLAEHLL Trigger: AAGGAGATGTTCTGCCAATTGAATGGAAACTGTCCATAGTGGGGAGCAGAGAGCCTCATCTTTTCTGGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000492522.3 ENST00000669176.1 |
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| CDS CAA 72 bp | ATCGGCCTAAAGTCACGTAGCTATTTAGCACTAGAATaGGGGTCTGAACCCAGACTGCCTGATTTGAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: IGLKSRSYLALE*GSEPRLPDLKS Trigger: AGACTTCAAATCAGGCAGTCTGGGTTCAGACCCCAATTCTAGTGCTAAATAGCTACGTGACTTTAGGCCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000492522.3 ENST00000575202.3 ENST00000628006.2 ENST00000628749.2 ENST00000629037.1 |
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| CDS CAA 90 bp | ACCACTAGGATGCTGATCAGATTCATGTTTTATCTGATCTCTCCCTaGACCTCCAAGCTCTTATTTCCTGCAGTCCTGAAACTTCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: TTRMLIRFMFYLISP*TSKLLFPAVLKLPF Trigger: GAAAGGAAGTTTCAGGACTGCAGGAAATAAGAGCTTGGAGGTCAAGGGAGAGATCAGATAAAACATGAATCTGATCAGCATCCTAGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000492522.3 ENST00000669176.1 |
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| CDS CAA 72 bp | GCTCTCTGCTCCCCACTATGGACAGTTTCCATTCAATaGGCAGAACATCTCCTTGAGCTTTTAAGAATAACA | + |
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Preference number: 6 (lower is better) Translates to: ALCSPLWTVSIQ*AEHLLELLRIT Trigger: TGTTATTCTTAAAAGCTCAAGGAGATGTTCTGCCAATTGAATGGAAACTGTCCATAGTGGGGAGCAGAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000492522.3 ENST00000669176.1 |
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| CDS TCA 72 bp | GACATCAGGGCTATTTTTGATGCTGTCCTGGACTTGTaGCATGGCAATATCCACAAAATGTCATTAGCCTAT | + |
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Preference number: 6 (lower is better) Translates to: DIRAIFDAVLDL*HGNIHKMSLAY Trigger: ATAGGCTAATGACATTTTGTGGATATTGCCATGTCACAAGTCCAGGACAGCATCAAAAATAGCCCTGATGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000478824.1 ENST00000669176.1 |
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| CDS CAA 72 bp | AGAACAACCGATGACATTGTTATAATTTTTCTCATTTaGCAGGCAAAGAGACTGGGGCTCAGGGAAGTCACA | + |
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Preference number: 6 (lower is better) Translates to: RTTDDIVIIFLI*QAKRLGLREVT Trigger: TGTGACTTCCCTGAGCCCCAGTCTCTTTGCCTGCAAAATGAGAAAAATTATAACAATGTCATCGGTTGTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000492522.3 ENST00000575202.3 ENST00000628749.2 ENST00000629037.1 |
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| CDS CAA 72 bp | ATGCTGATCAGATTCATGTTTTATCTGATCTCTCCCTaGACCTCCAAGCTCTTATTTCCTGCAGTCCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: MLIRFMFYLISP*TSKLLFPAVLK Trigger: TTTCAGGACTGCAGGAAATAAGAGCTTGGAGGTCAAGGGAGAGATCAGATAAAACATGAATCTGATCAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000492522.3 ENST00000669176.1 |
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| CDS CAA 72 bp | CAGTTTCCTTCAAATTTTTGGAAACCCGTAGTCATATaGGATTGCCTGAAGAACTTAAACACGTCTTTAACT | + |
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Preference number: 6 (lower is better) Translates to: QFPSNFWKPVVI*DCLKNLNTSLT Trigger: AGTTAAAGACGTGTTTAAGTTCTTCAGGCAATCCAATATGACTACGGGTTTCCAAAAATTTGAAGGAAACTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492522.3 |
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