Pregenerated sensors for LINC02084 (Homo sapiens)
Ensembl gene IDs: ENSG00000272282Ensembl transcript IDs: ENST00000606069.1
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCGGGAGTAAGCCAATCCCAGGACCCGGTCCACCGGCGCGTGTCTTaGAAAGAATGTCGGAGGTCAGATTCTCTCCTACCGCTTAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: PGVSQSQDPVHRRVS*KECRRSDSLLPLRG Trigger: GCCTCTAAGCGGTAGGAGAGAATCTGACCTCCGACATTCTTTTCAAGACACGCGCCGGTGGACCGGGTCCTGGGATTGGCTTACTCCCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS CCA 90 bp | AGCTGGGAATTGTCGGGATGTAGAGTAGCTATCCTGGGGGTGGAGTaGGGAGCCGCAGACGTCTGGAAGGGAAACTGGGAAAGGTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: SWELSGCRVAILGVE*GAADVWKGNWERWE Trigger: TTCCCACCTTTCCCAGTTTCCCTTCCAGACGTCTGCGGCTCCCCACTCCACCCCCAGGATAGCTACTCTACATCCCGACAATTCCCAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS CCA 90 bp | GGAGCCGGTTTCAAGTCTGCAGCAACGTATCTTCCAAACCTTCAATaGAGAGTTTCGAGGCTCCAAATCTGTTTTTGGTCCCGGTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: GAGFKSAATYLPNLQ*RVSRLQICFWSRFP Trigger: GGGAAACCGGGACCAAAAACAGATTTGGAGCCTCGAAACTCTCCATTGAAGGTTTGGAAGATACGTTGCTGCAGACTTGAAACCGGCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS CCA 90 bp | AGCAGATTAGCGCGCCATATTTTCAGCCCATGTTTGGGCCGGATTTaGAGCCGGTTTCAAGTCTGCAGCAACGTATCTTCCAAACCTTCA | + |
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Preference number: 5 (lower is better) Translates to: SRLARHIFSPCLGRI*SRFQVCSNVSSKPS Trigger: TGAAGGTTTGGAAGATACGTTGCTGCAGACTTGAAACCGGCTCCAAATCCGGCCCAAACATGGGCTGAAAATATGGCGCGCTAATCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS GCA 90 bp | ATTTTCAGCCCATGTTTGGGCCGGATTTGGAGCCGGTTTCAAGTCTaGAGCAACGTATCTTCCAAACCTTCAATGGAGAGTTTCGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: IFSPCLGRIWSRFQV*SNVSSKPSMESFEA Trigger: AGCCTCGAAACTCTCCATTGAAGGTTTGGAAGATACGTTGCTGCAGACTTGAAACCGGCTCCAAATCCGGCCCAAACATGGGCTGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS TCA 90 bp | CGGTTTCCCTTTTTACAGCCGTCTTTGATTCGCTTTAAACCTAGGTaGAAGCAGACTCACGGTCTTCCCTCTCCTCTGCAGTCTCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: RFPFLQPSLIRFKPR*KQTHGLPSPLQSLL Trigger: AAGAAGAGACTGCAGAGGAGAGGGAAGACCGTGAGTCTGCTTTCACCTAGGTTTAAAGCGAATCAAAGACGGCTGTAAAAAGGGAAACCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS TCA 90 bp | TCCAAATCTGTTTTTGGTCCCGGTTTCCCTTTTTACAGCCGTCTTTaGTTCGCTTTAAACCTAGGTGAAAGCAGACTCACGGTCTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: SKSVFGPGFPFYSRL*FALNLGESRLTVFP Trigger: AGGGAAGACCGTGAGTCTGCTTTCACCTAGGTTTAAAGCGAATCAAAGACGGCTGTAAAAAGGGAAACCGGGACCAAAAACAGATTTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS CCA 90 bp | CTTCCAAACCTTCAATGGAGAGTTTCGAGGCTCCAAATCTGTTTTTaGTCCCGGTTTCCCTTTTTACAGCCGTCTTTGATTCGCTTTAAA | + |
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Preference number: 5 (lower is better) Translates to: LPNLQWRVSRLQICF*SRFPFLQPSLIRFK Trigger: TTTAAAGCGAATCAAAGACGGCTGTAAAAAGGGAAACCGGGACCAAAAACAGATTTGGAGCCTCGAAACTCTCCATTGAAGGTTTGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS CCA 72 bp | GCTATCCTGGGGGTGGAGTGGGGAGCCGCAGACGTCTaGAAGGGAAACTGGGAAAGGTGGGAAGAGTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: AILGVEWGAADV*KGNWERWEESE Trigger: TTCTGACTCTTCCCACCTTTCCCAGTTTCCCTTCCAGACGTCTGCGGCTCCCCACTCCACCCCCAGGATAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS CAA 90 bp | CTGGGTGGTTCCAGAATTCCTCCTCCTGGGTGTAGAAGCTGGGAATaGTCGGGATGTAGAGTAGCTATCCTGGGGGTGGAGTGGGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: LGGSRIPPPGCRSWE*SGCRVAILGVEWGA Trigger: GGCTCCCCACTCCACCCCCAGGATAGCTACTCTACATCCCGACAATTCCCAGCTTCTACACCCAGGAGGAGGAATTCTGGAACCACCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS TCA 72 bp | AGCCAATCCCAGGACCCGGTCCACCGGCGCGTGTCTTaGAAAGAATGTCGGAGGTCAGATTCTCTCCTACCG | + |
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Preference number: 6 (lower is better) Translates to: SQSQDPVHRRVS*KECRRSDSLLP Trigger: CGGTAGGAGAGAATCTGACCTCCGACATTCTTTTCAAGACACGCGCCGGTGGACCGGGTCCTGGGATTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS CAA 72 bp | AAGCCAATCCCAGGACCCGGTCCACCGGCGCGTGTCTaGAAAAGAATGTCGGAGGTCAGATTCTCTCCTACC | + |
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Preference number: 6 (lower is better) Translates to: KPIPGPGPPARV*KRMSEVRFSPT Trigger: GGTAGGAGAGAATCTGACCTCCGACATTCTTTTCAAGACACGCGCCGGTGGACCGGGTCCTGGGATTGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS CCA 72 bp | GCGCGCCATATTTTCAGCCCATGTTTGGGCCGGATTTaGAGCCGGTTTCAAGTCTGCAGCAACGTATCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ARHIFSPCLGRI*SRFQVCSNVSS Trigger: GGAAGATACGTTGCTGCAGACTTGAAACCGGCTCCAAATCCGGCCCAAACATGGGCTGAAAATATGGCGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS CCA 72 bp | GGTGGTTCCAGAATTCCTCCTCCTGGGTGTAGAAGCTaGGAATTGTCGGGATGTAGAGTAGCTATCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: GGSRIPPPGCRS*ELSGCRVAILG Trigger: CCCCAGGATAGCTACTCTACATCCCGACAATTCCCAGCTTCTACACCCAGGAGGAGGAATTCTGGAACCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS CAA 72 bp | AGCAGCAGATTAGCGCGCCATATTTTCAGCCCATGTTaGGGCCGGATTTGGAGCCGGTTTCAAGTCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSRLARHIFSPC*GRIWSRFQVCS Trigger: GCTGCAGACTTGAAACCGGCTCCAAATCCGGCCCAAACATGGGCTGAAAATATGGCGCGCTAATCTGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS CAA 90 bp | AGGAGGGGAAGCAGCAGATTAGCGCGCCATATTTTCAGCCCATGTTaGGGCCGGATTTGGAGCCGGTTTCAAGTCTGCAGCAACGTATCT | + |
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Preference number: 6 (lower is better) Translates to: RRGSSRLARHIFSPC*GRIWSRFQVCSNVS Trigger: AGATACGTTGCTGCAGACTTGAAACCGGCTCCAAATCCGGCCCAAACATGGGCTGAAAATATGGCGCGCTAATCTGCTGCTTCCCCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS CAA 72 bp | AGCGCGCCATATTTTCAGCCCATGTTTGGGCCGGATTaGGAGCCGGTTTCAAGTCTGCAGCAACGTATCTTC | + |
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Preference number: 6 (lower is better) Translates to: SAPYFQPMFGPD*EPVSSLQQRIF Trigger: GAAGATACGTTGCTGCAGACTTGAAACCGGCTCCAAATCCGGCCCAAACATGGGCTGAAAATATGGCGCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS CAA 90 bp | CAGCAGATTAGCGCGCCATATTTTCAGCCCATGTTTGGGCCGGATTaGGAGCCGGTTTCAAGTCTGCAGCAACGTATCTTCCAAACCTTC | + |
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Preference number: 6 (lower is better) Translates to: QQISAPYFQPMFGPD*EPVSSLQQRIFQTF Trigger: GAAGGTTTGGAAGATACGTTGCTGCAGACTTGAAACCGGCTCCAAATCCGGCCCAAACATGGGCTGAAAATATGGCGCGCTAATCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS GCA 72 bp | CCATGTTTGGGCCGGATTTGGAGCCGGTTTCAAGTCTaGAGCAACGTATCTTCCAAACCTTCAATGGAGAGT | + |
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Preference number: 6 (lower is better) Translates to: PCLGRIWSRFQV*SNVSSKPSMES Trigger: ACTCTCCATTGAAGGTTTGGAAGATACGTTGCTGCAGACTTGAAACCGGCTCCAAATCCGGCCCAAACATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS TCA 72 bp | AAAGGGAATTTGGAGAAATCTGTTGCTGAGCACGATTaGGTCCCACTCTATAAAATACCCATCACCCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: KGNLEKSVAEHD*VPLYKIPITPP Trigger: CGGCGGGGTGATGGGTATTTTATAGAGTGGGACTCAATCGTGCTCAGCAACAGATTTCTCCAAATTCCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS TCA 72 bp | TTTTTACAGCCGTCTTTGATTCGCTTTAAACCTAGGTaGAAGCAGACTCACGGTCTTCCCTCTCCTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: FLQPSLIRFKPR*KQTHGLPSPLQ Trigger: CTGCAGAGGAGAGGGAAGACCGTGAGTCTGCTTTCACCTAGGTTTAAAGCGAATCAAAGACGGCTGTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS TCA 72 bp | GTTTTTGGTCCCGGTTTCCCTTTTTACAGCCGTCTTTaGTTCGCTTTAAACCTAGGTGAAAGCAGACTCACG | + |
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Preference number: 6 (lower is better) Translates to: VFGPGFPFYSRL*FALNLGESRLT Trigger: CGTGAGTCTGCTTTCACCTAGGTTTAAAGCGAATCAAAGACGGCTGTAAAAAGGGAAACCGGGACCAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS CAA 72 bp | CCTTCAATGGAGAGTTTCGAGGCTCCAAATCTGTTTTaGGTCCCGGTTTCCCTTTTTACAGCCGTCTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: PSMESFEAPNLF*VPVSLFTAVFD Trigger: ATCAAAGACGGCTGTAAAAAGGGAAACCGGGACCAAAAACAGATTTGGAGCCTCGAAACTCTCCATTGAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS CCA 72 bp | CTTCAATGGAGAGTTTCGAGGCTCCAAATCTGTTTTTaGTCCCGGTTTCCCTTTTTACAGCCGTCTTTGATT | + |
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Preference number: 6 (lower is better) Translates to: LQWRVSRLQICF*SRFPFLQPSLI Trigger: AATCAAAGACGGCTGTAAAAAGGGAAACCGGGACCAAAAACAGATTTGGAGCCTCGAAACTCTCCATTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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| CDS CCA 72 bp | TTCAAGTCTGCAGCAACGTATCTTCCAAACCTTCAATaGAGAGTTTCGAGGCTCCAAATCTGTTTTTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: FKSAATYLPNLQ*RVSRLQICFWS Trigger: GGACCAAAAACAGATTTGGAGCCTCGAAACTCTCCATTGAAGGTTTGGAAGATACGTTGCTGCAGACTTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000606069.1 |
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