Pregenerated sensors for LINC02074 (Homo sapiens)
Ensembl gene IDs: ENSG00000266357Ensembl transcript IDs: ENST00000581028.5, ENST00000584003.1, ENST00000653467.1, ENST00000654301.1, ENST00000666198.1, ENST00000668167.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGAGCAGACGCAGTGTTCTCTCTCCCTGCTTCTCGCAAGGTCACGTaGTCCCATTTCCACCCCTCTAGCTGCTCCCTCCTCGTTGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: GADAVFSLPASRKVT*SHFHPSSCSLLVVF Trigger: AAAGACAACGAGGAGGGAGCAGCTAGAGGGGTGGAAATGGGATCACGTGACCTTGCGAGAAGCAGGGAGAGAGAACACTGCGTCTGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000581028.5 ENST00000584003.1 ENST00000653467.1 ENST00000666198.1 ENST00000668167.1 |
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| CDS CCA 90 bp | GTCACAGCGCATAATAACGTTCATTCCCGCATTGTTGTGACTGCTTaGGCTTTGGTCCTGCTCACCGTGCCTGACTCAGGTGGGGTAAGG | + |
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Preference number: 5 (lower is better) Translates to: VTAHNNVHSRIVVTA*ALVLLTVPDSGGVR Trigger: CCTTACCCCACCTGAGTCAGGCACGGTGAGCAGGACCAAAGCCCAAGCAGTCACAACAATGCGGGAATGAACGTTATTATGCGCTGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666198.1 |
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| CDS TCA 90 bp | CCTCTAGCTGCTCCCTCCTCGTTGTCTTTCTCAAGAATGAAGCCGTaGACCCTCGCACTGAGTATTACAGTTCTTAAAGGCGGCGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: PLAAPSSLSFSRMKP*TLALSITVLKGGVS Trigger: GGACACGCCGCCTTTAAGAACTGTAATACTCAGTGCGAGGGTTCACGGCTTCATTCTTGAGAAAGACAACGAGGAGGGAGCAGCTAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000581028.5 ENST00000653467.1 ENST00000666198.1 ENST00000668167.1 |
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| CDS TCA 90 bp | GTCCCTAGGATATCCTGGAAGTCCTCTGTTAGGGATTCCCTATATTaGGCATCTGTCAGTTGCTCTGGCTGGGGCTGTTCCACTGGACAG | + |
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Preference number: 5 (lower is better) Translates to: VPRISWKSSVRDSLY*ASVSCSGWGCSTGQ Trigger: CTGTCCAGTGGAACAGCCCCAGCCAGAGCAACTGACAGATGCTCAATATAGGGAATCCCTAACAGAGGACTTCCAGGATATCCTAGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653467.1 |
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| CDS CCA 90 bp | GAAAGCTCCTGTTTCTCGGGTAATGAAGGCCGCTCAGCCTCTGCTTaGGGATGGGAGCCTGGAGCGTATCTTTTGGGAAATTACAGGTAT | + |
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Preference number: 5 (lower is better) Translates to: ESSCFSGNEGRSASA*GWEPGAYLLGNYRY Trigger: ATACCTGTAATTTCCCAAAAGATACGCTCCAGGCTCCCATCCCCAAGCAGAGGCTGAGCGGCCTTCATTACCCGAGAAACAGGAGCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584003.1 |
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| CDS CCA 90 bp | CCTATATTGAGCATCTGTCAGTTGCTCTGGCTGGGGCTGTTCCACTaGACAGAAGGCTGGACGAGCTGCCTTTTTCTTGCCAGGATTCTA | + |
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Preference number: 5 (lower is better) Translates to: PILSICQLLWLGLFH*TEGWTSCLFLARIL Trigger: TAGAATCCTGGCAAGAAAAAGGCAGCTCGTCCAGCCTTCTGTCCAGTGGAACAGCCCCAGCCAGAGCAACTGACAGATGCTCAATATAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653467.1 |
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| CDS CCA 90 bp | TCCTCTCCAAATCTCATGGTGAAATGTGATCCACAATGTTGGAGGTaGAGCCTAATGGAAGGTGTTTGGGTCCTGGGGGCAGATGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SSPNLMVKCDPQCWR*SLMEGVWVLGADAS Trigger: GGAGGCATCTGCCCCCAGGACCCAAACACCTTCCATTAGGCTCCACCTCCAACATTGTGGATCACATTTCACCATGAGATTTGGAGAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666198.1 |
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| CDS TCA 90 bp | CAAATATCGTCACAGCGCATAATAACGTTCATTCCCGCATTGTTGTaGCTGCTTGGGCTTTGGTCCTGCTCACCGTGCCTGACTCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: QISSQRIITFIPALL*LLGLWSCSPCLTQV Trigger: CACCTGAGTCAGGCACGGTGAGCAGGACCAAAGCCCAAGCAGTCACAACAATGCGGGAATGAACGTTATTATGCGCTGTGACGATATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666198.1 |
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| CDS CCA 90 bp | TCCTGTTTCTCGGGTAATGAAGGCCGCTCAGCCTCTGCTTGGGGATaGGAGCCTGGAGCGTATCTTTTGGGAAATTACAGGTATCACTTT | + |
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Preference number: 5 (lower is better) Translates to: SCFSGNEGRSASAWG*EPGAYLLGNYRYHF Trigger: AAAGTGATACCTGTAATTTCCCAAAAGATACGCTCCAGGCTCCCATCCCCAAGCAGAGGCTGAGCGGCCTTCATTACCCGAGAAACAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000584003.1 |
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| CDS TCA 90 bp | GTCCCTAGGATATCCTGGAAGTCCTCTGTTAGGGATTCCCTATATTaGGCTGTTCTAAAAGGGAGCAGACGCAGTGTTCTCTCTCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: VPRISWKSSVRDSLY*AVLKGSRRSVLSPC Trigger: GCAGGGAGAGAGAACACTGCGTCTGCTCCCTTTTAGAACAGCTCAATATAGGGAATCCCTAACAGAGGACTTCCAGGATATCCTAGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000581028.5 ENST00000584003.1 ENST00000666198.1 ENST00000668167.1 |
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| CDS CCA 90 bp | GGACGAGCTGCCTTTTTCTTGCCAGGATTCTACAATTCTAGAACGTaGTCTGTTCTAAAAGGGAGCAGACGCAGTGTTCTCTCTCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: GRAAFFLPGFYNSRT*SVLKGSRRSVLSPC Trigger: GCAGGGAGAGAGAACACTGCGTCTGCTCCCTTTTAGAACAGACCACGTTCTAGAATTGTAGAATCCTGGCAAGAAAAAGGCAGCTCGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653467.1 |
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| CDS CCA 90 bp | AAGGCTTCGTTGTTGCTCCATCTTATGGATGAGGACAAGAGTATCTaGCCAGCTAAGGAACTTGTCCAAAGTCACACTCAAAGCCAGATG | + |
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Preference number: 5 (lower is better) Translates to: KASLLLHLMDEDKSI*PAKELVQSHTQSQM Trigger: CATCTGGCTTTGAGTGTGACTTTGGACAAGTTCCTTAGCTGGCCAGATACTCTTGTCCTCATCCATAAGATGGAGCAACAACGAAGCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653467.1 ENST00000654301.1 ENST00000668167.1 |
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| CDS TCA 90 bp | AGTCTCACTTTATTCACCTACTTAGTCTGCTCCCCTAGGCGCATATaGATTCATCAAATATCGTCACAGCGCATAATAACGTTCATTCCC | + |
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Preference number: 5 (lower is better) Translates to: SLTLFTYLVCSPRRI*IHQISSQRIITFIP Trigger: GGGAATGAACGTTATTATGCGCTGTGACGATATTTGATGAATTCATATGCGCCTAGGGGAGCAGACTAAGTAGGTGAATAAAGTGAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666198.1 |
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| CDS TCA 90 bp | AAATGCTTGGCATATACTAATTCATTCAATCCTCACAATAACCTATaGGAAAGGCTTCGTTGTTGCTCCATCTTATGGATGAGGACAAGA | + |
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Preference number: 5 (lower is better) Translates to: KCLAYTNSFNPHNNL*ERLRCCSILWMRTR Trigger: TCTTGTCCTCATCCATAAGATGGAGCAACAACGAAGCCTTTCTCATAGGTTATTGTGAGGATTGAATGAATTAGTATATGCCAAGCATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653467.1 ENST00000654301.1 ENST00000668167.1 |
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| CDS TCA 72 bp | GCAGTGTTCTCTCTCCCTGCTTCTCGCAAGGTCACGTaGTCCCATTTCCACCCCTCTAGCTGCTCCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: AVFSLPASRKVT*SHFHPSSCSLL Trigger: GAGGAGGGAGCAGCTAGAGGGGTGGAAATGGGATCACGTGACCTTGCGAGAAGCAGGGAGAGAGAACACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000581028.5 ENST00000584003.1 ENST00000653467.1 ENST00000666198.1 ENST00000668167.1 |
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| CDS CAA 90 bp | GCGCATAATAACGTTCATTCCCGCATTGTTGTGACTGCTTGGGCTTaGGTCCTGCTCACCGTGCCTGACTCAGGTGGGGTAAGGCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: AHNNVHSRIVVTAWA*VLLTVPDSGGVRPG Trigger: CCCTGGCCTTACCCCACCTGAGTCAGGCACGGTGAGCAGGACCAAAGCCCAAGCAGTCACAACAATGCGGGAATGAACGTTATTATGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666198.1 |
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| CDS CAA 72 bp | TCCACAATGTTGGAGGTGGAGCCTAATGGAAGGTGTTaGGGTCCTGGGGGCAGATGCCTCCTGAACGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: STMLEVEPNGRC*GPGGRCLLNGL Trigger: CAAGCCGTTCAGGAGGCATCTGCCCCCAGGACCCAAACACCTTCCATTAGGCTCCACCTCCAACATTGTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666198.1 |
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| CDS TCA 72 bp | GTGGTGACTCAGGTATCCAGGATCCTCCCTGGATCTTaGGGCTCTGCTGTCCCTAGGATATCCTGGAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: VVTQVSRILPGS*GSAVPRISWKS Trigger: GGACTTCCAGGATATCCTAGGGACAGCAGAGCCTCAAGATCCAGGGAGGATCCTGGATACCTGAGTCACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000581028.5 ENST00000584003.1 ENST00000653467.1 ENST00000654301.1 ENST00000666198.1 ENST00000668167.1 |
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| CDS CAA 72 bp | AACGTTCATTCCCGCATTGTTGTGACTGCTTGGGCTTaGGTCCTGCTCACCGTGCCTGACTCAGGTGGGGTA | + |
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Preference number: 6 (lower is better) Translates to: NVHSRIVVTAWA*VLLTVPDSGGV Trigger: TACCCCACCTGAGTCAGGCACGGTGAGCAGGACCAAAGCCCAAGCAGTCACAACAATGCGGGAATGAACGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666198.1 |
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| CDS GCA 72 bp | GTTCTAAAAGGGAGCAGACGCAGTGTTCTCTCTCCCTaGTTCTCGCAAGGTCACGTGATCCCATTTCCACCC | + |
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Preference number: 6 (lower is better) Translates to: VLKGSRRSVLSP*FSQGHVIPFPP Trigger: GGGTGGAAATGGGATCACGTGACCTTGCGAGAAGCAGGGAGAGAGAACACTGCGTCTGCTCCCTTTTAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000581028.5 ENST00000584003.1 ENST00000653467.1 ENST00000666198.1 ENST00000668167.1 |
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| CDS CCA 72 bp | TGTTTCTCGGGTAATGAAGGCCGCTCAGCCTCTGCTTaGGGATGGGAGCCTGGAGCGTATCTTTTGGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: CFSGNEGRSASA*GWEPGAYLLGN Trigger: ATTTCCCAAAAGATACGCTCCAGGCTCCCATCCCCAAGCAGAGGCTGAGCGGCCTTCATTACCCGAGAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584003.1 |
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| CDS TCA 72 bp | TCACAGCGCATAATAACGTTCATTCCCGCATTGTTGTaGCTGCTTGGGCTTTGGTCCTGCTCACCGTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SQRIITFIPALL*LLGLWSCSPCL Trigger: CAGGCACGGTGAGCAGGACCAAAGCCCAAGCAGTCACAACAATGCGGGAATGAACGTTATTATGCGCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666198.1 |
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| CDS TCA 72 bp | TCAATCAGTTCTTCCAGGAGATTCCCCTCCAAGTGGTaGCTCAGGTATCCAGGATCCTCCCTGGATCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: SISSSRRFPSKW*LRYPGSSLDLE Trigger: CTCAAGATCCAGGGAGGATCCTGGATACCTGAGTCACCACTTGGAGGGGAATCTCCTGGAAGAACTGATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000581028.5 ENST00000584003.1 ENST00000653467.1 ENST00000654301.1 ENST00000666198.1 ENST00000668167.1 |
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| CDS TCA 72 bp | ATATCCTGGAAGTCCTCTGTTAGGGATTCCCTATATTaGGCATCTGTCAGTTGCTCTGGCTGGGGCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: ISWKSSVRDSLY*ASVSCSGWGCS Trigger: GGAACAGCCCCAGCCAGAGCAACTGACAGATGCTCAATATAGGGAATCCCTAACAGAGGACTTCCAGGATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653467.1 |
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| CDS GCA 72 bp | TCACACTCAAAGCCAGATGCAAACACGGAAGTCAGATaGCAGAGCTGTTGCTTAAAGCTCTGTGCCATCCTG | + |
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Preference number: 6 (lower is better) Translates to: SHSKPDANTEVR*QSCCLKLCAIL Trigger: CAGGATGGCACAGAGCTTTAAGCAACAGCTCTGGCATCTGACTTCCGTGTTTGCATCTGGCTTTGAGTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653467.1 ENST00000654301.1 ENST00000668167.1 |
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| CDS CCA 72 bp | CCTCTGCTTGGGGATGGGAGCCTGGAGCGTATCTTTTaGGAAATTACAGGTATCACTTTATCTTTCCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: PLLGDGSLERIF*EITGITLSFQG Trigger: CCCCTGGAAAGATAAAGTGATACCTGTAATTTCCCAAAAGATACGCTCCAGGCTCCCATCCCCAAGCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000584003.1 |
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| CDS CCA 72 bp | AATCTCATGGTGAAATGTGATCCACAATGTTGGAGGTaGAGCCTAATGGAAGGTGTTTGGGTCCTGGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: NLMVKCDPQCWR*SLMEGVWVLGA Trigger: TGCCCCCAGGACCCAAACACCTTCCATTAGGCTCCACCTCCAACATTGTGGATCACATTTCACCATGAGATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666198.1 |
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| CDS CCA 72 bp | GGTGGGAAGGGAGAGGAGGGGTTTGCTGACATGGTTTaGATGTTTGTCCTCTCCAAATCTCATGGTGAAATG | + |
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Preference number: 6 (lower is better) Translates to: GGKGEEGFADMV*MFVLSKSHGEM Trigger: CATTTCACCATGAGATTTGGAGAGGACAAACATCCAAACCATGTCAGCAAACCCCTCCTCTCCCTTCCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666198.1 |
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| CDS CAA 90 bp | GCTGTTGGCCAACCACCAGGCTCACCAAGCAAGAAGACCCTCAAGTaGAATGTAGATGTTGCTGATCAATCAGTTCTTCCAGGAGATTCC | + |
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Preference number: 6 (lower is better) Translates to: AVGQPPGSPSKKTLK*NVDVADQSVLPGDS Trigger: GGAATCTCCTGGAAGAACTGATTGATCAGCAACATCTACATTCAACTTGAGGGTCTTCTTGCTTGGTGAGCCTGGTGGTTGGCCAACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581028.5 |
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| CDS CAA 90 bp | ACACTCAAAGCCAGATGCAAACACGGAAGTCAGATGCCAGAGCTGTaGCTTAAAGCTCTGTGCCATCCTGTCTTACGGAACAACCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: TLKARCKHGSQMPEL*LKALCHPVLRNNLK Trigger: CTTGAGGTTGTTCCGTAAGACAGGATGGCACAGAGCTTTAAGCAACAGCTCTGGCATCTGACTTCCGTGTTTGCATCTGGCTTTGAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653467.1 ENST00000654301.1 ENST00000668167.1 |
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| CDS CAA 90 bp | AGGGTGGGAAGGGAGAGGAGGGGTTTGCTGACATGGTTTGGATGTTaGTCCTCTCCAAATCTCATGGTGAAATGTGATCCACAATGTTGG | + |
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Preference number: 6 (lower is better) Translates to: RVGRERRGLLTWFGC*SSPNLMVKCDPQCW Trigger: CCAACATTGTGGATCACATTTCACCATGAGATTTGGAGAGGACAAACATCCAAACCATGTCAGCAAACCCCTCCTCTCCCTTCCCACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666198.1 |
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| CDS TCA 72 bp | GCTCCCTCCTCGTTGTCTTTCTCAAGAATGAAGCCGTaGACCCTCGCACTGAGTATTACAGTTCTTAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: APSSLSFSRMKP*TLALSITVLKG Trigger: GCCTTTAAGAACTGTAATACTCAGTGCGAGGGTTCACGGCTTCATTCTTGAGAAAGACAACGAGGAGGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000581028.5 ENST00000653467.1 ENST00000666198.1 ENST00000668167.1 |
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| CDS CAA 72 bp | TCCACTGGACAGAAGGCTGGACGAGCTGCCTTTTTCTaGCCAGGATTCTACAATTCTAGAACGTGGTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: STGQKAGRAAFF*PGFYNSRTWSV Trigger: AACAGACCACGTTCTAGAATTGTAGAATCCTGGCAAGAAAAAGGCAGCTCGTCCAGCCTTCTGTCCAGTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653467.1 |
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| CDS TCA 72 bp | GTGATCCTGGTAACTTACAGAGAAAATCATCTCAGCTaGTGTGGTCTGGCTAAGGCTGCCAGTCACATAGAG | + |
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Preference number: 6 (lower is better) Translates to: VILVTYRENHLS*CGLAKAASHIE Trigger: CTCTATGTGACTGGCAGCCTTAGCCAGACCACATCAGCTGAGATGATTTTCTCTGTAAGTTACCAGGATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653467.1 ENST00000654301.1 ENST00000668167.1 |
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| CDS GCA 72 bp | GGAAGTCAGATGCCAGAGCTGTTGCTTAAAGCTCTGTaGCATCCTGTCTTACGGAACAACCTCAAGTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: GSQMPELLLKAL*HPVLRNNLKLN Trigger: ATTCAACTTGAGGTTGTTCCGTAAGACAGGATGGCACAGAGCTTTAAGCAACAGCTCTGGCATCTGACTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653467.1 ENST00000654301.1 ENST00000668167.1 |
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| CDS CAA 72 bp | TGGATGAGGACAAGAGTATCTGGCCAGCTAAGGAACTaGTCCAAAGTCACACTCAAAGCCAGATGCAAACAC | + |
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Preference number: 6 (lower is better) Translates to: WMRTRVSGQLRN*SKVTLKARCKH Trigger: GTGTTTGCATCTGGCTTTGAGTGTGACTTTGGACAAGTTCCTTAGCTGGCCAGATACTCTTGTCCTCATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653467.1 ENST00000654301.1 ENST00000668167.1 |
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| CDS CAA 72 bp | AGGGAGAGGAGGGGTTTGCTGACATGGTTTGGATGTTaGTCCTCTCCAAATCTCATGGTGAAATGTGATCCA | + |
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Preference number: 6 (lower is better) Translates to: RERRGLLTWFGC*SSPNLMVKCDP Trigger: TGGATCACATTTCACCATGAGATTTGGAGAGGACAAACATCCAAACCATGTCAGCAAACCCCTCCTCTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666198.1 |
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| CDS TCA 72 bp | ATATCCTGGAAGTCCTCTGTTAGGGATTCCCTATATTaGGCTGTTCTAAAAGGGAGCAGACGCAGTGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: ISWKSSVRDSLY*AVLKGSRRSVL Trigger: GAGAACACTGCGTCTGCTCCCTTTTAGAACAGCTCAATATAGGGAATCCCTAACAGAGGACTTCCAGGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000581028.5 ENST00000584003.1 ENST00000666198.1 ENST00000668167.1 |
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| CDS CAA 72 bp | CAACCACCAGGCTCACCAAGCAAGAAGACCCTCAAGTaGAATGTAGATGTTGCTGATCAATCAGTTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: QPPGSPSKKTLK*NVDVADQSVLP Trigger: TGGAAGAACTGATTGATCAGCAACATCTACATTCAACTTGAGGGTCTTCTTGCTTGGTGAGCCTGGTGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581028.5 |
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| CDS CCA 72 bp | TTGTTGCTCCATCTTATGGATGAGGACAAGAGTATCTaGCCAGCTAAGGAACTTGTCCAAAGTCACACTCAA | + |
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Preference number: 6 (lower is better) Translates to: LLLHLMDEDKSI*PAKELVQSHTQ Trigger: TTGAGTGTGACTTTGGACAAGTTCCTTAGCTGGCCAGATACTCTTGTCCTCATCCATAAGATGGAGCAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653467.1 ENST00000654301.1 ENST00000668167.1 |
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| CDS CAA 72 bp | AAGAAGATGCTGGTGCCATGCTTCCACAGCCTCAAGTaGAATGTAGATGTTGCTGATCAATCAGTTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: KKMLVPCFHSLK*NVDVADQSVLP Trigger: TGGAAGAACTGATTGATCAGCAACATCTACATTCAACTTGAGGCTGTGGAAGCATGGCACCAGCATCTTCTT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000584003.1 ENST00000666198.1 |
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| CDS CAA 72 bp | GCTCTGTGCCATCCTGTCTTACGGAACAACCTCAAGTaGAATGTAGATGTTGCTGATCAATCAGTTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: ALCHPVLRNNLK*NVDVADQSVLP Trigger: TGGAAGAACTGATTGATCAGCAACATCTACATTCAACTTGAGGTTGTTCCGTAAGACAGGATGGCACAGAGC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653467.1 ENST00000654301.1 ENST00000668167.1 |
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| CDS TCA 72 bp | TTATTCACCTACTTAGTCTGCTCCCCTAGGCGCATATaGATTCATCAAATATCGTCACAGCGCATAATAACG | + |
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Preference number: 6 (lower is better) Translates to: LFTYLVCSPRRI*IHQISSQRIIT Trigger: CGTTATTATGCGCTGTGACGATATTTGATGAATTCATATGCGCCTAGGGGAGCAGACTAAGTAGGTGAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666198.1 |
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| CDS CAA 72 bp | GAAACTGGCTTTTTCCTTAGGGAAGAGGGTAGTCAATaGAACCGCTGGACAGGATTTATTTGCATGTCTATA | + |
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Preference number: 6 (lower is better) Translates to: ETGFFLREEGSQ*NRWTGFICMSI Trigger: TATAGACATGCAAATAAATCCTGTCCAGCGGTTCAATTGACTACCCTCTTCCCTAAGGAAAAAGCCAGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000653467.1 ENST00000654301.1 ENST00000668167.1 |
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| CDS GCA 72 bp | ACTCAGCATCTACTACATGTCAGGCACTGCTTCAAATaGTTGGCATATACTAATTCATTCAATCCTCACAAT | + |
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Preference number: 6 (lower is better) Translates to: TQHLLHVRHCFK*LAYTNSFNPHN Trigger: ATTGTGAGGATTGAATGAATTAGTATATGCCAAGCATTTGAAGCAGTGCCTGACATGTAGTAGATGCTGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653467.1 ENST00000654301.1 ENST00000668167.1 |
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| CDS CCA 72 bp | TTTTTCCTTAGGGAAGAGGGTAGTCAATTGAACCGCTaGACAGGATTTATTTGCATGTCTATAGACAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: FFLREEGSQLNR*TGFICMSIDKN Trigger: ATTCTTGTCTATAGACATGCAAATAAATCCTGTCCAGCGGTTCAATTGACTACCCTCTTCCCTAAGGAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000653467.1 ENST00000654301.1 ENST00000668167.1 |
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| CDS TCA 72 bp | GCATATACTAATTCATTCAATCCTCACAATAACCTATaGGAAAGGCTTCGTTGTTGCTCCATCTTATGGATG | + |
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Preference number: 6 (lower is better) Translates to: AYTNSFNPHNNL*ERLRCCSILWM Trigger: CATCCATAAGATGGAGCAACAACGAAGCCTTTCTCATAGGTTATTGTGAGGATTGAATGAATTAGTATATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653467.1 ENST00000654301.1 ENST00000668167.1 |
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