Pregenerated sensors for LINC02073 (Homo sapiens)
Ensembl gene IDs: ENSG00000267452Ensembl transcript IDs: ENST00000441895.3, ENST00000588341.1, ENST00000592081.2, ENST00000650413.1, ENST00000654524.1, ENST00000656686.1, ENST00000662469.1, ENST00000663289.1, ENST00000663733.1
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGGTTTATTCCTCCAGTGAGCTCTGCAAGGGCAGAGAGTGCCTCGTaGCCCTCACTATCCCTAGCAGCCAGCTGGGTGCAGGACCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: RFIPPVSSARAESAS*PSLSLAASWVQDPA Trigger: TGCTGGGTCCTGCACCCAGCTGGCTGCTAGGGATAGTGAGGGGCACGAGGCACTCTCTGCCCTTGCAGAGCTCACTGGAGGAATAAACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441895.3 |
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| CDS GCA 90 bp | CTTCTGCCTGTTTGTCCCCAGCCTGGCCTTGAGCTGATTGGACAGTaGACACTCACACTGAGAACGGGTCTCCTTCTCAGCCCGCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: LLPVCPQPGLELIGQ*TLTLRTGLLLSPLA Trigger: AGCCAGCGGGCTGAGAAGGAGACCCGTTCTCAGTGTGAGTGTGCACTGTCCAATCAGCTCAAGGCCAGGCTGGGGACAAACAGGCAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS CCA 90 bp | GAGGCGAAGGGAGTGATGCATTCAGGCCCCAGAATTTCAGCCCAGTaGGCACCCTCCCTGCCAGTGCCCCCAACCCTATTCATTATTCCA | + |
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Preference number: 5 (lower is better) Translates to: EAKGVMHSGPRISAQ*APSLPVPPTLFIIP Trigger: TGGAATAATGAATAGGGTTGGGGGCACTGGCAGGGAGGGTGCCCACTGGGCTGAAATTCTGGGGCCTGAATGCATCACTCCCTTCGCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441895.3 |
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| CDS CCA 90 bp | CCAGAGGCCCTGGCCCATTTTCATCTGGCCTCAGCAATAGATGCCTaGTCCACGGGCCAGCTCTCCAGTAGGAAAGCCAGTCCTCATCTT | + |
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Preference number: 5 (lower is better) Translates to: PEALAHFHLASAIDA*STGQLSSRKASPHL Trigger: AAGATGAGGACTGGCTTTCCTACTGGAGAGCTGGCCCGTGGACCAGGCATCTATTGCTGAGGCCAGATGAAAATGGGCCAGGGCCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588341.1 |
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| CDS GCA 90 bp | TCTACAAAGGTTTATTCCTCCAGTGAGCTCTGCAAGGGCAGAGAGTaGCTCGTGCCCCTCACTATCCCTAGCAGCCAGCTGGGTGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: STKVYSSSELCKGRE*LVPLTIPSSQLGAG Trigger: TCCTGCACCCAGCTGGCTGCTAGGGATAGTGAGGGGCACGAGGCACTCTCTGCCCTTGCAGAGCTCACTGGAGGAATAAACCTTTGTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441895.3 ENST00000663733.1 |
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| CDS CCA 90 bp | GACACTGCATGGCTTTGCTCCATCTCTCTTGGCTGTGGCAGCGTGTaGCCAGAGGCCCTGGCCCATTTTCATCTGGCCTCAGCAATAGAT | + |
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Preference number: 5 (lower is better) Translates to: DTAWLCSISLGCGSV*PEALAHFHLASAID Trigger: ATCTATTGCTGAGGCCAGATGAAAATGGGCCAGGGCCTCTGGCCACACGCTGCCACAGCCAAGAGAGATGGAGCAAAGCCATGCAGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588341.1 |
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| CDS TCA 90 bp | CTCACACTGAGAACGGGTCTCCTTCTCAGCCCGCTGGCTCACATGTaGGTCTCCTCTGGAAACACTCTCACAGACACACCCAGGAATGAT | + |
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Preference number: 5 (lower is better) Translates to: LTLRTGLLLSPLAHM*VSSGNTLTDTPRND Trigger: ATCATTCCTGGGTGTGTCTGTGAGAGTGTTTCCAGAGGAGACTCACATGTGAGCCAGCGGGCTGAGAAGGAGACCCGTTCTCAGTGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS GCA 90 bp | CCCATCAAACCTTCCTCTACAAAGGTTTATTCCTCCAGTGAGCTCTaGAAGGGCAGAGAGTGCCTCGTGCCCCTCACTATCCCTAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: PIKPSSTKVYSSSEL*KGRECLVPLTIPSS Trigger: GCTGCTAGGGATAGTGAGGGGCACGAGGCACTCTCTGCCCTTGCAGAGCTCACTGGAGGAATAAACCTTTGTAGAGGAAGGTTTGATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441895.3 ENST00000663733.1 |
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| CDS GCA 90 bp | TCCTCCACAGTGGCCTCTGGATGTGTGGTCACTTCTGCTCTGCTCTaGAGTTGTGTTGATGGCAAGGAACTCAGTGATGGGGAGTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: SSTVASGCVVTSALL*SCVDGKELSDGESF Trigger: GAAGGACTCCCCATCACTGAGTTCCTTGCCATCAACACAACTGCAGAGCAGAGCAGAAGTGACCACACATCCAGAGGCCACTGTGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588341.1 |
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| CDS TCA 90 bp | AGCCAGAAGGAGCCCACCCAGGAGGCTCACAGAAGAGGTGAAGCTTaGGGAAGGCATAGAACAAATGCAGTCAACCTGAGATCTTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: SQKEPTQEAHRRGEA*GRHRTNAVNLRSSG Trigger: CCCAGAAGATCTCAGGTTGACTGCATTTGTTCTATGCCTTCCTCAAGCTTCACCTCTTCTGTGAGCCTCCTGGGTGGGCTCCTTCTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000656686.1 ENST00000662469.1 |
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| CDS TCA 90 bp | TTACCCAGCCATTGTCCCAGTGAAGATGAGATCCAGCTCCTTCCCTaGAGGAAGGTGTTGATGGAGGGGGACAGCAGTGTCTGCATGAAG | + |
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Preference number: 5 (lower is better) Translates to: LPSHCPSEDEIQLLP*RKVLMEGDSSVCMK Trigger: CTTCATGCAGACACTGCTGTCCCCCTCCATCAACACCTTCCTTCAGGGAAGGAGCTGGATCTCATCTTCACTGGGACAATGGCTGGGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654524.1 ENST00000663733.1 |
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| CDS TCA 90 bp | CAAAGTCACACAACTAGTGGGACAGGCAGGCTCTCAGATGGTCTCTaGAGACCCCACCTTCGGGTATCCACACCACCACATAGTCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: QSHTTSGTGRLSDGL*RPHLRVSTPPHSLS Trigger: AGAGAGACTATGTGGTGGTGTGGATACCCGAAGGTGGGGTCTTCAGAGACCATCTGAGAGCCTGCCTGTCCCACTAGTTGTGTGACTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662469.1 |
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| CDS GCA 90 bp | GTGTTTCCTCCACAGTGGCCTCTGGATGTGTGGTCACTTCTGCTCTaGTCTGCAGTTGTGTTGATGGCAAGGAACTCAGTGATGGGGAGT | + |
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Preference number: 5 (lower is better) Translates to: VFPPQWPLDVWSLLL*SAVVLMARNSVMGS Trigger: ACTCCCCATCACTGAGTTCCTTGCCATCAACACAACTGCAGAGCAGAGCAGAAGTGACCACACATCCAGAGGCCACTGTGGAGGAAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588341.1 |
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| CDS TCA 90 bp | GAGTCCTTCCAGCACTTTGACCTGACCCCTTTCTCAAACCTAAGTTaGCACTGCATGGCTTTGCTCCATCTCTCTTGGCTGTGGCAGCGT | + |
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Preference number: 5 (lower is better) Translates to: ESFQHFDLTPFSNLS*HCMALLHLSWLWQR Trigger: ACGCTGCCACAGCCAAGAGAGATGGAGCAAAGCCATGCAGTGTCAACTTAGGTTTGAGAAAGGGGTCAGGTCAAAGTGCTGGAAGGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588341.1 |
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| CDS CCA 90 bp | TGTAGTCTGATGTCCAAGGAGAAAAGGCATCCTGCTCCAGAAAGGTaGGAGAGAGAATCCTCCTTCTTCTGCCTGTTTGTCCCCAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: CSLMSKEKRHPAPER*ERESSFFCLFVPSL Trigger: CAGGCTGGGGACAAACAGGCAGAAGAAGGAGGATTCTCTCTCCCACCTTTCTGGAGCAGGATGCCTTTTCTCCTTGGACATCAGACTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS CCA 90 bp | GTGATTACAGAGGTGGAGAAGTCCCATGATAGGCCATCCACAAGCTaGAGAATCAGAGAAGCCCGTAGCATGCCTCAGTCCAAGTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: VITEVEKSHDRPSTS*RIREARSMPQSKSR Trigger: TCTGGACTTGGACTGAGGCATGCTACGGGCTTCTCTGATTCTCCAGCTTGTGGATGGCCTATCATGGGACTTCTCCACCTCTGTAATCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS TCA 90 bp | ACACTCTCACAGACACACCCAGGAATGATGGACGCCACCAGCCACTaGGGCATTCCTCAACCCAGTCAAGCTGATACCCTAAAATTAACC | + |
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Preference number: 5 (lower is better) Translates to: TLSQTHPGMMDATSH*GIPQPSQADTLKLT Trigger: GGTTAATTTTAGGGTATCAGCTTGACTGGGTTGAGGAATGCCTCAGTGGCTGGTGGCGTCCATCATTCCTGGGTGTGTCTGTGAGAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS GCA 90 bp | CCAAGGACATCTATTCCGGCTGGCCAGTATGCTAAAGTTGATTGGTaGCATTGGGAAGAGCTGATGAGATGCACTAGAGATGACGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: PRTSIPAGQYAKVDW*HWEELMRCTRDDAA Trigger: AGCTGCGTCATCTCTAGTGCATCTCATCAGCTCTTCCCAATGGCACCAATCAACTTTAGCATACTGGCCAGCCGGAATAGATGTCCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS GCA 90 bp | TGTCCCCAAGGCAGAAGTGGTGGCTCAGATGATTCCACAGAGCACTaGGTGGGTAATGTCTTCCTCTCTCACTCCAGAGGAACTATAAAT | + |
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Preference number: 5 (lower is better) Translates to: CPQGRSGGSDDSTEH*VGNVFLSHSRGTIN Trigger: ATTTATAGTTCCTCTGGAGTGAGAGAGGAAGACATTACCCACGCAGTGCTCTGTGGAATCATCTGAGCCACCACTTCTGCCTTGGGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000588341.1 ENST00000592081.2 ENST00000650413.1 ENST00000663289.1 |
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| CDS CCA 90 bp | TGCCCAAGGACATCTATTCCGGCTGGCCAGTATGCTAAAGTTGATTaGTGCCATTGGGAAGAGCTGATGAGATGCACTAGAGATGACGCA | + |
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Preference number: 5 (lower is better) Translates to: CPRTSIPAGQYAKVD*CHWEELMRCTRDDA Trigger: TGCGTCATCTCTAGTGCATCTCATCAGCTCTTCCCAATGGCACCAATCAACTTTAGCATACTGGCCAGCCGGAATAGATGTCCTTGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS TCA 90 bp | GTCATTGCCAGCCTCATCCAGAGCCACTATGAAGCATTTAACTGCTaGTGGCACCAACCAGGCACTGTACCGAGAAAATTACTATTGGTG | + |
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Preference number: 5 (lower is better) Translates to: VIASLIQSHYEAFNC*WHQPGTVPRKLLLV Trigger: CACCAATAGTAATTTTCTCGGTACAGTGCCTGGTTGGTGCCATCAGCAGTTAAATGCTTCATAGTGGCTCTGGATGAGGCTGGCAATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662469.1 |
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| CDS GCA 90 bp | CAGTCAACCCGGCACCATTTATTGAACAAGGAGTCCATTACTCATTaGTTGCTTTGTCGAAGATCAGATGGCCATGGGTGTGTGGCCTTA | + |
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Preference number: 5 (lower is better) Translates to: QSTRHHLLNKESITH*LLCRRSDGHGCVAL Trigger: TAAGGCCACACACCCATGGCCATCTGATCTTCGACAAAGCAAGCAATGAGTAATGGACTCCTTGTTCAATAAATGGTGCCGGGTTGACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000588341.1 ENST00000592081.2 ENST00000650413.1 |
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| CDS CCA 90 bp | ACATCTATTCCGGCTGGCCAGTATGCTAAAGTTGATTGGTGCCATTaGGAAGAGCTGATGAGATGCACTAGAGATGACGCAGCTTTAGAG | + |
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Preference number: 5 (lower is better) Translates to: TSIPAGQYAKVDWCH*EELMRCTRDDAALE Trigger: CTCTAAAGCTGCGTCATCTCTAGTGCATCTCATCAGCTCTTCCCAATGGCACCAATCAACTTTAGCATACTGGCCAGCCGGAATAGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS TCA 90 bp | CAGATTTCTGCCTCTTCCTGCCTTCTGATGCTGAACTTGCCTCTCTaGTCCTCAGTATCTAAACCTCTAATGCCATGGGAAGATGGAGAT | + |
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Preference number: 5 (lower is better) Translates to: QISASSCLLMLNLPL*SSVSKPLMPWEDGD Trigger: ATCTCCATCTTCCCATGGCATTAGAGGTTTAGATACTGAGGATCAGAGAGGCAAGTTCAGCATCAGAAGGCAGGAAGAGGCAGAAATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS GCA 90 bp | CAGTATGCTAAAGTTGATTGGTGCCATTGGGAAGAGCTGATGAGATaGACTAGAGATGACGCAGCTTTAGAGTTAGGAATCGGTGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: QYAKVDWCHWEELMR*TRDDAALELGIGVQ Trigger: CTGGACACCGATTCCTAACTCTAAAGCTGCGTCATCTCTAGTGCATCTCATCAGCTCTTCCCAATGGCACCAATCAACTTTAGCATACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS GCA 90 bp | GGAATGATCTTGGAGTCAAGCAGGTCTGAATCTGAATCCTGGCTTTaGTCTGTGTCCTTCACCAATTCACAGAATCTCTCCAAGCTTCGA | + |
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Preference number: 5 (lower is better) Translates to: GMILESSRSESESWL*SVSFTNSQNLSKLR Trigger: TCGAAGCTTGGAGAGATTCTGTGAATTGGTGAAGGACACAGAGCAAAGCCAGGATTCAGATTCAGACCTGCTTGACTCCAAGATCATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000588341.1 ENST00000592081.2 ENST00000650413.1 ENST00000654524.1 ENST00000663289.1 ENST00000663733.1 |
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| CDS GCA 90 bp | TGCCACCAACACGAAGCAATTAAGCCCAACTTCACATCGTATGGATaGATCCGGACTAAGTGGGAAAAGCTTCTGGGGAATTCACTACTT | + |
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Preference number: 5 (lower is better) Translates to: CHQHEAIKPNFTSYG*IRTKWEKLLGNSLL Trigger: AAGTAGTGAATTCCCCAGAAGCTTTTCCCACTTAGTCCGGATGCATCCATACGATGTGAAGTTGGGCTTAATTGCTTCGTGTTGGTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588341.1 |
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| CDS CCA 90 bp | GTAAGGAAGCCAGAGCTTCCTGAGAGCTGGAGAGTGGAATCCAAGTaGGATCTTCAAGATCACCTGAAGCTGATTCTTTCTAACTGTGAA | + |
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Preference number: 5 (lower is better) Translates to: VRKPELPESWRVESK*DLQDHLKLILSNCE Trigger: TTCACAGTTAGAAAGAATCAGCTTCAGGTGATCTTGAAGATCCCACTTGGATTCCACTCTCCAGCTCTCAGGAAGCTCTGGCTTCCTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS CCA 90 bp | AAATACTTTCAGCTGAAAAGCAAAGGTAGCAAAAACTCCAGGAGGTaGCCTTTGCATCCAGGACACATCGCAGAGTCTGTAAGCTTTGAC | + |
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Preference number: 5 (lower is better) Translates to: KYFQLKSKGSKNSRR*PLHPGHIAESVSFD Trigger: GTCAAAGCTTACAGACTCTGCGATGTGTCCTGGATGCAAAGGCCACCTCCTGGAGTTTTTGCTACCTTTGCTTTTCAGCTGAAAGTATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592081.2 |
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| CDS TCA 90 bp | CTTAACAGGTTTGCCTGGAGCCAGCCTTGCAAGAAACTCTGCTTGTaGTGGCTCATTTACTTCTCAAATTGCTGCATTCTTGTATTCCAT | + |
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Preference number: 5 (lower is better) Translates to: LNRFAWSQPCKKLCL*WLIYFSNCCILVFH Trigger: ATGGAATACAAGAATGCAGCAATTTGAGAAGTAAATGAGCCATCACAAGCAGAGTTTCTTGCAAGGCTGGCTCCAGGCAAACCTGTTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654524.1 ENST00000663733.1 |
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| CDS TCA 90 bp | CTAAGGATAATGGCCTCCAGCTCCATCATGTTCCTGCAAAAGACATaGTCTTGTTCTTTCTTATGGTTGCATAGTATTCCATGGGACCTA | + |
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Preference number: 5 (lower is better) Translates to: LRIMASSSIMFLQKT*SCSFLWLHSIPWDL Trigger: TAGGTCCCATGGAATACTATGCAACCATAAGAAAGAACAAGATCATGTCTTTTGCAGGAACATGATGGAGCTGGAGGCCATTATCCTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000588341.1 ENST00000592081.2 ENST00000650413.1 |
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| CDS CCA 90 bp | TGTGTCCTTCACCAATTCACAGAATCTCTCCAAGCTTCGACTTCCTaGTTAACATCCTACATGGGTTGTCTTCTTTTCTTCTTTCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: CVLHQFTESLQASTS*LTSYMGCLLFFFLP Trigger: AGGAAGAAAGAAGAAAAGAAGACAACCCATGTAGGATGTTAACCAGGAAGTCGAAGCTTGGAGAGATTCTGTGAATTGGTGAAGGACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663733.1 |
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| CDS TCA 90 bp | TCCCAAAGCATGTTCCATGTAACTGCAATGGAACTACAATTGCATTaGTTCAACCAATGTTTACTGTGCTTTCTCTATGTGCCAGACACC | + |
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Preference number: 5 (lower is better) Translates to: SQSMFHVTAMELQLH*FNQCLLCFLYVPDT Trigger: GGTGTCTGGCACATAGAGAAAGCACAGTAAACATTGGTTGAATCAATGCAATTGTAGTTCCATTGCAGTTACATGGAACATGCTTTGGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662469.1 |
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| CDS CCA 90 bp | ATTTCTTTCAACCTAAGAAAACTGCATTCTTGTATTCCATTTAAATaGTTGTCAGGCATGGAAATCAGAGCAGAAAGAACCCAGCTGTCA | + |
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Preference number: 5 (lower is better) Translates to: ISFNLRKLHSCIPFK*LSGMEIRAERTQLS Trigger: TGACAGCTGGGTTCTTTCTGCTCTGATTTCCATGCCTGACAACCATTTAAATGGAATACAAGAATGCAGTTTTCTTAGGTTGAAAGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000588341.1 ENST00000592081.2 ENST00000650413.1 ENST00000663289.1 |
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| CDS CAA 72 bp | CCTCAGAATCAGGGAGGCCAACAGCACAGACCTTCGTaGGAGGCTGAAGGCCTGAGGGCCCCGGGAGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: PQNQGGQQHRPS*EAEGLRAPGGH Trigger: ATGGCCTCCCGGGGCCCTCAGGCCTTCAGCCTCCAACGAAGGTCTGTGCTGTTGGCCTCCCTGATTCTGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS TCA 72 bp | TCAGGGAGGCCAACAGCACAGACCTTCGTTGGAGGCTaGAGGCCTGAGGGCCCCGGGAGGCCATTGGTACAA | + |
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Preference number: 6 (lower is better) Translates to: SGRPTAQTFVGG*RPEGPGRPLVQ Trigger: TTGTACCAATGGCCTCCCGGGGCCCTCAGGCCTTCAGCCTCCAACGAAGGTCTGTGCTGTTGGCCTCCCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS TCA 72 bp | GCCAACAGCACAGACCTTCGTTGGAGGCTGAAGGCCTaGGGGCCCCGGGAGGCCATTGGTACAAGTCCTAGA | + |
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Preference number: 6 (lower is better) Translates to: ANSTDLRWRLKA*GPREAIGTSPR Trigger: TCTAGGACTTGTACCAATGGCCTCCCGGGGCCCTCAGGCCTTCAGCCTCCAACGAAGGTCTGTGCTGTTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS GCA 72 bp | GTTTATTCCTCCAGTGAGCTCTGCAAGGGCAGAGAGTaGCTCGTGCCCCTCACTATCCCTAGCAGCCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: VYSSSELCKGRE*LVPLTIPSSQL Trigger: CAGCTGGCTGCTAGGGATAGTGAGGGGCACGAGGCACTCTCTGCCCTTGCAGAGCTCACTGGAGGAATAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000441895.3 ENST00000663733.1 |
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| CDS TCA 72 bp | AGAACGGGTCTCCTTCTCAGCCCGCTGGCTCACATGTaGGTCTCCTCTGGAAACACTCTCACAGACACACCC | + |
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Preference number: 6 (lower is better) Translates to: RTGLLLSPLAHM*VSSGNTLTDTP Trigger: GGGTGTGTCTGTGAGAGTGTTTCCAGAGGAGACTCACATGTGAGCCAGCGGGCTGAGAAGGAGACCCGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS GCA 72 bp | GTTTGTCCCCAGCCTGGCCTTGAGCTGATTGGACAGTaGACACTCACACTGAGAACGGGTCTCCTTCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: VCPQPGLELIGQ*TLTLRTGLLLS Trigger: GCTGAGAAGGAGACCCGTTCTCAGTGTGAGTGTGCACTGTCCAATCAGCTCAAGGCCAGGCTGGGGACAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS TCA 72 bp | CTCCTCTGGAAACACTCTCACAGACACACCCAGGAATaGTGGACGCCACCAGCCACTGAGGCATTCCTCAAC | + |
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Preference number: 6 (lower is better) Translates to: LLWKHSHRHTQE*WTPPATEAFLN Trigger: GTTGAGGAATGCCTCAGTGGCTGGTGGCGTCCATCATTCCTGGGTGTGTCTGTGAGAGTGTTTCCAGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS TCA 72 bp | ACAACTAGTGGGACAGGCAGGCTCTCAGATGGTCTCTaGAGACCCCACCTTCGGGTATCCACACCACCACAT | + |
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Preference number: 6 (lower is better) Translates to: TTSGTGRLSDGL*RPHLRVSTPPH Trigger: ATGTGGTGGTGTGGATACCCGAAGGTGGGGTCTTCAGAGACCATCTGAGAGCCTGCCTGTCCCACTAGTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662469.1 |
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| CDS CCA 72 bp | GAGGTGGAGAAGTCCCATGATAGGCCATCCACAAGCTaGAGAATCAGAGAAGCCCGTAGCATGCCTCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: EVEKSHDRPSTS*RIREARSMPQS Trigger: GGACTGAGGCATGCTACGGGCTTCTCTGATTCTCCAGCTTGTGGATGGCCTATCATGGGACTTCTCCACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS TCA 72 bp | CATTGTCCCAGTGAAGATGAGATCCAGCTCCTTCCCTaGAGGAAGGTGTTGATGGAGGGGGACAGCAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: HCPSEDEIQLLP*RKVLMEGDSSV Trigger: GACACTGCTGTCCCCCTCCATCAACACCTTCCTTCAGGGAAGGAGCTGGATCTCATCTTCACTGGGACAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654524.1 ENST00000663733.1 |
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| CDS GCA 72 bp | GTGGCCTCTGGATGTGTGGTCACTTCTGCTCTGCTCTaGAGTTGTGTTGATGGCAAGGAACTCAGTGATGGG | + |
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Preference number: 6 (lower is better) Translates to: VASGCVVTSALL*SCVDGKELSDG Trigger: CCCATCACTGAGTTCCTTGCCATCAACACAACTGCAGAGCAGAGCAGAAGTGACCACACATCCAGAGGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588341.1 |
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| CDS CAA 90 bp | TGGCCTCTGGATGTGTGGTCACTTCTGCTCTGCTCTGCAGTTGTGTaGATGGCAAGGAACTCAGTGATGGGGAGTCCTTCCAGCACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: WPLDVWSLLLCSAVV*MARNSVMGSPSSTL Trigger: CAAAGTGCTGGAAGGACTCCCCATCACTGAGTTCCTTGCCATCAACACAACTGCAGAGCAGAGCAGAAGTGACCACACATCCAGAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588341.1 |
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| CDS TCA 72 bp | CATCAAACCTTCCTCTACAAAGGTTTATTCCTCCAGTaGGCTCTGCAAGGGCAGAGAGTGCCTCGTGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: HQTFLYKGLFLQ*ALQGQRVPRAP Trigger: AGGGGCACGAGGCACTCTCTGCCCTTGCAGAGCTCACTGGAGGAATAAACCTTTGTAGAGGAAGGTTTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000441895.3 ENST00000654524.1 ENST00000663733.1 |
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| CDS TCA 72 bp | GAGCCCACCCAGGAGGCTCACAGAAGAGGTGAAGCTTaGGGAAGGCATAGAACAAATGCAGTCAACCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: EPTQEAHRRGEA*GRHRTNAVNLR Trigger: TCTCAGGTTGACTGCATTTGTTCTATGCCTTCCTCAAGCTTCACCTCTTCTGTGAGCCTCCTGGGTGGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000656686.1 ENST00000662469.1 |
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| CDS TCA 72 bp | AAGGAGCCCACCAGGTGTGACGAGGCTGGAGAAAACTaGAGGTGCCACCAGAAACGTCCACTTAACAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: KEPTRCDEAGEN*RCHQKRPLNRF Trigger: AAACCTGTTAAGTGGACGTTTCTGGTGGCACCTTCAGTTTTCTCCAGCCTCGTCACACCTGGTGGGCTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654524.1 ENST00000663733.1 |
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| CDS CAA 72 bp | GATGTGTGGTCACTTCTGCTCTGCTCTGCAGTTGTGTaGATGGCAAGGAACTCAGTGATGGGGAGTCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: DVWSLLLCSAVV*MARNSVMGSPS Trigger: GGAAGGACTCCCCATCACTGAGTTCCTTGCCATCAACACAACTGCAGAGCAGAGCAGAAGTGACCACACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588341.1 |
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| CDS CAA 90 bp | CTGGAGAAAACTGAAGGTGCCACCAGAAACGTCCACTTAACAGGTTaGCCTGGAGCCAGCCTTGCAAGAAACTCTGCTTGTGATGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LEKTEGATRNVHLTG*PGASLARNSACDGS Trigger: TGAGCCATCACAAGCAGAGTTTCTTGCAAGGCTGGCTCCAGGCAAACCTGTTAAGTGGACGTTTCTGGTGGCACCTTCAGTTTTCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654524.1 ENST00000663733.1 |
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| CDS CCA 72 bp | CCGGCTGGCCAGTATGCTAAAGTTGATTGGTGCCATTaGGAAGAGCTGATGAGATGCACTAGAGATGACGCA | + |
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Preference number: 6 (lower is better) Translates to: PAGQYAKVDWCH*EELMRCTRDDA Trigger: TGCGTCATCTCTAGTGCATCTCATCAGCTCTTCCCAATGGCACCAATCAACTTTAGCATACTGGCCAGCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS CCA 72 bp | TTTATTTGTTCATCCAGCAGCTGCGTAACTGCCCAATaGGTTCACCTTGCCCGCTGCCTAGACACAGCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: FICSSSSCVTAQ*VHLARCLDTAD Trigger: ATCAGCTGTGTCTAGGCAGCGGGCAAGGTGAACCCATTGGGCAGTTACGCAGCTGCTGGATGAACAAATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592081.2 |
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| CDS CCA 72 bp | GAAGTGGTGGCTCAGATGATTCCACAGAGCACTGCGTaGGTAATGTCTTCCTCTCTCACTCCAGAGGAACTA | + |
|
Preference number: 6 (lower is better) Translates to: EVVAQMIPQSTA*VMSSSLTPEEL Trigger: TAGTTCCTCTGGAGTGAGAGAGGAAGACATTACCCACGCAGTGCTCTGTGGAATCATCTGAGCCACCACTTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000588341.1 ENST00000592081.2 ENST00000650413.1 ENST00000663289.1 |
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| CDS CAA 72 bp | ACTGAAGGTGCCACCAGAAACGTCCACTTAACAGGTTaGCCTGGAGCCAGCCTTGCAAGAAACTCTGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: TEGATRNVHLTG*PGASLARNSAC Trigger: ACAAGCAGAGTTTCTTGCAAGGCTGGCTCCAGGCAAACCTGTTAAGTGGACGTTTCTGGTGGCACCTTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654524.1 ENST00000663733.1 |
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| CDS TCA 72 bp | CGTTGTTCAGCCAAAGGATCTAGATACTTCCCCAGATaGTGTCCCCAAGGCAGAAGTGGTGGCTCAGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: RCSAKGSRYFPR*CPQGRSGGSDD Trigger: ATCATCTGAGCCACCACTTCTGCCTTGGGGACATCATCTGGGGAAGTATCTAGATCCTTTGGCTGAACAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000588341.1 ENST00000592081.2 ENST00000650413.1 ENST00000663289.1 |
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| CDS CCA 72 bp | ATGTCCAAGGAGAAAAGGCATCCTGCTCCAGAAAGGTaGGAGAGAGAATCCTCCTTCTTCTGCCTGTTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: MSKEKRHPAPER*ERESSFFCLFV Trigger: GACAAACAGGCAGAAGAAGGAGGATTCTCTCTCCCACCTTTCTGGAGCAGGATGCCTTTTCTCCTTGGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS CCA 72 bp | CAGCTGAAAAGCAAAGGTAGCAAAAACTCCAGGAGGTaGCCTTTGCATCCAGGACACATCGCAGAGTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: QLKSKGSKNSRR*PLHPGHIAESV Trigger: TACAGACTCTGCGATGTGTCCTGGATGCAAAGGCCACCTCCTGGAGTTTTTGCTACCTTTGCTTTTCAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592081.2 |
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| CDS TCA 72 bp | CACCAGCCACTGAGGCATTCCTCAACCCAGTCAAGCTaGTACCCTAAAATTAACCATCACAGTCTCAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: HQPLRHSSTQSS*YPKINHHSLRS Trigger: AGATCTGAGACTGTGATGGTTAATTTTAGGGTATCAGCTTGACTGGGTTGAGGAATGCCTCAGTGGCTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS CCA 72 bp | ACATCTATTCCGGCTGGCCAGTATGCTAAAGTTGATTaGTGCCATTGGGAAGAGCTGATGAGATGCACTAGA | + |
|
Preference number: 6 (lower is better) Translates to: TSIPAGQYAKVD*CHWEELMRCTR Trigger: TCTAGTGCATCTCATCAGCTCTTCCCAATGGCACCAATCAACTTTAGCATACTGGCCAGCCGGAATAGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS CCA 72 bp | CCCAACTTCACATCGTATGGATGCATCCGGACTAAGTaGGAAAAGCTTCTGGGGAATTCACTACTTGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: PNFTSYGCIRTK*EKLLGNSLLAE Trigger: TTCAGCAAGTAGTGAATTCCCCAGAAGCTTTTCCCACTTAGTCCGGATGCATCCATACGATGTGAAGTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588341.1 |
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| CDS TCA 72 bp | AGGAGACAGCATCTGTTGAGCTTTTGGGTTTTCCTATaGGTACTTCTTCCAGGAAAGCCCATCAAACCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRQHLLSFWVFL*VLLPGKPIKPS Trigger: GGAAGGTTTGATGGGCTTTCCTGGAAGAAGTACTCATAGGAAAACCCAAAAGCTCAACAGATGCTGTCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS TCA 72 bp | TATGAAAAGAAAGGTATTAGGGGGCATTGGCCCTTGTaGTTACAGAGGTGGAGAAGTCCCATGATAGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: YEKKGIRGHWPL*LQRWRSPMIGH Trigger: ATGGCCTATCATGGGACTTCTCCACCTCTGTAATCACAAGGGCCAATGCCCCCTAATACCTTTCTTTTCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS TCA 72 bp | CATGTGCCTGGGACTGTGCTAGATGCTTCACATAGCTaGTCACATCTAATCCTTGCAGCATTCTTAAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: HVPGTVLDASHS*SHLILAAFLSR Trigger: CCTACTTAAGAATGCTGCAAGGATTAGATGTGATCAGCTATGTGAAGCATCTAGCACAGTCCCAGGCACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662469.1 |
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| CDS TCA 72 bp | AGAAGGAGAAGCTGGAACCTGACCTCTCTTAAGCTTTaGATCTCAGCTCTACATCCAAACCTGGAAGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RRRSWNLTSLKL*ISALHPNLEVG Trigger: TCCTACTTCCAGGTTTGGATGTAGAGCTGAGATTCAAAGCTTAAGAGAGGTCAGGTTCCAGCTTCTCCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662469.1 |
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| CDS GCA 72 bp | CGGCACCATTTATTGAACAAGGAGTCCATTACTCATTaGTTGCTTTGTCGAAGATCAGATGGCCATGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RHHLLNKESITH*LLCRRSDGHGC Trigger: ACACCCATGGCCATCTGATCTTCGACAAAGCAAGCAATGAGTAATGGACTCCTTGTTCAATAAATGGTGCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000588341.1 ENST00000592081.2 ENST00000650413.1 |
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| CDS CCA 72 bp | CGTATGGATGCATCCGGACTAAGTGGGAAAAGCTTCTaGGGAATTCACTACTTGCTGAAAACAGAATCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RMDASGLSGKSF*GIHYLLKTESS Trigger: AGAGGATTCTGTTTTCAGCAAGTAGTGAATTCCCCAGAAGCTTTTCCCACTTAGTCCGGATGCATCCATACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000588341.1 |
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| CDS GCA 72 bp | AGACAGGGGAATTACAATAGAGAAAGAGTAATTCACTaGAGAGCCTGCTGTGTGGGAGACCGGAGTTTTATT | + |
|
Preference number: 6 (lower is better) Translates to: RQGNYNRERVIH*RACCVGDRSFI Trigger: AATAAAACTCCGGTCTCCCACACAGCAGGCTCTGCAGTGAATTACTCTTTCTCTATTGTAATTCCCCTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592081.2 |
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| CDS CCA 72 bp | ATGATCTTGGAGTCAAGCAGGTCTGAATCTGAATCCTaGCTTTGCTCTGTGTCCTTCACCAATTCACAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: MILESSRSESES*LCSVSFTNSQN Trigger: ATTCTGTGAATTGGTGAAGGACACAGAGCAAAGCCAGGATTCAGATTCAGACCTGCTTGACTCCAAGATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000588341.1 ENST00000592081.2 ENST00000650413.1 ENST00000654524.1 ENST00000663289.1 ENST00000663733.1 |
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| CDS CAA 72 bp | GCTGCAATTGCTTTTAGTGTCTTCATCATGAAATCTTaGCCCGTTCCTATATCCAGGGTGGTATTGCCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: AAIAFSVFIMKS*PVPISRVVLPR Trigger: CCTAGGCAATACCACCCTGGATATAGGAACGGGCAAAGATTTCATGATGAAGACACTAAAAGCAATTGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000588341.1 ENST00000592081.2 ENST00000650413.1 |
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| CDS TCA 72 bp | ACAGAATATAGCAAAGGAGACAGGCTGTTACTTCCATaGTTAGACTACAGGAGATTGTGCCTTCCATCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: TEYSKGDRLLLP*LDYRRLCLPSC Trigger: GCAAGATGGAAGGCACAATCTCCTGTAGTCTAATCATGGAAGTAACAGCCTGTCTCCTTTGCTATATTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662469.1 |
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| CDS CCA 72 bp | CACCAATTCACAGAATCTCTCCAAGCTTCGACTTCCTaGTTAACATCCTACATGGGTTGTCTTCTTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HQFTESLQASTS*LTSYMGCLLFF Trigger: GAAGAAAAGAAGACAACCCATGTAGGATGTTAACCAGGAAGTCGAAGCTTGGAGAGATTCTGTGAATTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663733.1 |
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| CDS CAA 72 bp | CCAAGCTTCGACTTCCTGGTTAACATCCTACATGGGTaGTCTTCTTTTCTTCTTTCTTCCTTTGCTTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PSFDFLVNILHG*SSFLLSSFASL Trigger: AAGGGAAGCAAAGGAAGAAAGAAGAAAAGAAGACAACCCATGTAGGATGTTAACCAGGAAGTCGAAGCTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663733.1 |
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| CDS CAA 90 bp | TTTGCTTTTGCTGCAATTGCTTTTAGTGTCTTCATCATGAAATCTTaGCCCGTTCCTATATCCAGGGTGGTATTGCCTAGGTTGTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: FAFAAIAFSVFIMKS*PVPISRVVLPRLSS Trigger: GGAAGACAACCTAGGCAATACCACCCTGGATATAGGAACGGGCAAAGATTTCATGATGAAGACACTAAAAGCAATTGCAGCAAAAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000588341.1 ENST00000592081.2 ENST00000650413.1 |
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| CDS GCA 72 bp | CTTGAAGAACAGGATCAGAAATCCTCTCATTTCAAATaGTCCATATCTGTATTAGTCAAGGTTCCCCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LEEQDQKSSHFK*SISVLVKVPQA Trigger: TGCCTGGGGAACCTTGACTAATACAGATATGGAGCATTTGAAATGAGAGGATTTCTGATCCTGTTCTTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS CAA 72 bp | ATGAAATCTTTGCCCGTTCCTATATCCAGGGTGGTATaGCCTAGGTTGTCTTCCAGAGTTTTTATAGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: MKSLPVPISRVV*PRLSSRVFIVL Trigger: CAGAACTATAAAAACTCTGGAAGACAACCTAGGCAATACCACCCTGGATATAGGAACGGGCAAAGATTTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000588341.1 ENST00000592081.2 ENST00000650413.1 |
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| CDS CAA 90 bp | GTCTTCATCATGAAATCTTTGCCCGTTCCTATATCCAGGGTGGTATaGCCTAGGTTGTCTTCCAGAGTTTTTATAGTTCTGGGTTTTACA | + |
|
Preference number: 6 (lower is better) Translates to: VFIMKSLPVPISRVV*PRLSSRVFIVLGFT Trigger: TGTAAAACCCAGAACTATAAAAACTCTGGAAGACAACCTAGGCAATACCACCCTGGATATAGGAACGGGCAAAGATTTCATGATGAAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000588341.1 ENST00000592081.2 ENST00000650413.1 |
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| CDS CAA 90 bp | AGAATCTCTCCAAGCTTCGACTTCCTGGTTAACATCCTACATGGGTaGTCTTCTTTTCTTCTTTCTTCCTTTGCTTCCCTTTTACCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RISPSFDFLVNILHG*SSFLLSSFASLLPV Trigger: AACAGGTAAAAGGGAAGCAAAGGAAGAAAGAAGAAAAGAAGACAACCCATGTAGGATGTTAACCAGGAAGTCGAAGCTTGGAGAGATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663733.1 |
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| CDS CAA 90 bp | TCTTTCAACCTAAGAAAACTGCATTCTTGTATTCCATTTAAATGGTaGTCAGGCATGGAAATCAGAGCAGAAAGAACCCAGCTGTCACGT | + |
|
Preference number: 6 (lower is better) Translates to: SFNLRKLHSCIPFKW*SGMEIRAERTQLSR Trigger: ACGTGACAGCTGGGTTCTTTCTGCTCTGATTTCCATGCCTGACAACCATTTAAATGGAATACAAGAATGCAGTTTTCTTAGGTTGAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000588341.1 ENST00000592081.2 ENST00000650413.1 ENST00000663289.1 |
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| CDS CAA 90 bp | CATTTACTTCTCAAATTGCTGCATTCTTGTATTCCATTTAAATGGTaGTCAGGCATGGAAATCAGAGCAGAAAGAACCCAGCTGTCACGT | + |
|
Preference number: 6 (lower is better) Translates to: HLLLKLLHSCIPFKW*SGMEIRAERTQLSR Trigger: ACGTGACAGCTGGGTTCTTTCTGCTCTGATTTCCATGCCTGACAACCATTTAAATGGAATACAAGAATGCAGCAATTTGAGAAGTAAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654524.1 ENST00000663733.1 |
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| CDS GCA 72 bp | ACTGTGAAACTATCCAGAAGTTATTTTAAAGAGGTATaGTCTGACCTACTGCTTCTTGAAGAACAGGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: TVKLSRSYFKEV*SDLLLLEEQDQ Trigger: CTGATCCTGTTCTTCAAGAAGCAGTAGGTCAGAGCATACCTCTTTAAAATAACTTCTGGATAGTTTCACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000662469.1 ENST00000663733.1 |
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| CDS CAA 72 bp | AATAAAACCAGTGACCTGGTTAACATCCTACATGGGTaGTCTTCTTTTCTTCTTTCTTCCTTTGCTTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: NKTSDLVNILHG*SSFLLSSFASL Trigger: AAGGGAAGCAAAGGAAGAAAGAAGAAAAGAAGACAACCCATGTAGGATGTTAACCAGGTCACTGGTTTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000441895.3 ENST00000650413.1 ENST00000654524.1 ENST00000656686.1 ENST00000662469.1 |
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| CDS TCA 72 bp | GATGTGACCAGATTGCTGCAATCTCATGATCAAATTTaGATAGATGAGGAGTTGCTTCTTATGGATAAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: DVTRLLQSHDQI*IDEELLLMDKQ Trigger: TTGCTTATCCATAAGAAGCAACTCCTCATCTATTCAAATTTGATCATGAGATTGCAGCAATCTGGTCACATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000588341.1 ENST00000592081.2 ENST00000650413.1 |
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