Pregenerated sensors for LINC02071 (Homo sapiens)
Ensembl gene IDs: ENSG00000249383Ensembl transcript IDs: ENST00000514726.1, ENST00000649531.1
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGCAAGTGGGAGGAGCCAGGATGTTGCTGCCTCCTCAGAGGTGACTaGGCTTTCCTAGGGCAGGGGAAGAAGGGCATTCTGGGCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SKWEEPGCCCLLRGD*AFLGQGKKGILGPG Trigger: CCCTGGGCCCAGAATGCCCTTCTTCCCCTGCCCTAGGAAAGCCCAGTCACCTCTGAGGAGGCAGCAACATCCTGGCTCCTCCCACTTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000514726.1 ENST00000649531.1 |
||
| CDS GCA 90 bp | ACGTGGGGATGCACTGAAAGCAAGTGGGAGGAGCCAGGATGTTGCTaGCTCCTCAGAGGTGACTGGGCTTTCCTAGGGCAGGGGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TWGCTESKWEEPGCC*LLRGDWAFLGQGKK Trigger: CTTCTTCCCCTGCCCTAGGAAAGCCCAGTCACCTCTGAGGAGGCAGCAACATCCTGGCTCCTCCCACTTGCTTTCAGTGCATCCCCACGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000514726.1 ENST00000649531.1 |
||
| CDS CCA 90 bp | CAGGGTTCCATGAGAGAATGGACGTGGGGATGCACTGAAAGCAAGTaGGAGGAGCCAGGATGTTGCTGCCTCCTCAGAGGTGACTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QGSMREWTWGCTESK*EEPGCCCLLRGDWA Trigger: AGCCCAGTCACCTCTGAGGAGGCAGCAACATCCTGGCTCCTCCCACTTGCTTTCAGTGCATCCCCACGTCCATTCTCTCATGGAACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000514726.1 ENST00000649531.1 |
||
| CDS TCA 90 bp | GAGATGTGCACAGGGTTCCATGAGAGAATGGACGTGGGGATGCACTaGAAGCAAGTGGGAGGAGCCAGGATGTTGCTGCCTCCTCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EMCTGFHERMDVGMH*KQVGGARMLLPPQR Trigger: CCTCTGAGGAGGCAGCAACATCCTGGCTCCTCCCACTTGCTTTCAGTGCATCCCCACGTCCATTCTCTCATGGAACCCTGTGCACATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000514726.1 ENST00000649531.1 |
||
| CDS GCA 90 bp | GCTGAACGTCTCTCTGGGCCTCAGGTGCCACATCTCAGATGGAAATaGAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: AERLSGPQVPHLRWK*RNHPSSASLTLGAV Trigger: TACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGATGTGGCACCTGAGGCCCAGAGAGACGTTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514726.1 |
||
| CDS TCA 90 bp | ACACAGTCTTACGGGTGCTCAGATAGAGATGTGCACAGGGTTCCATaGGAGAATGGACGTGGGGATGCACTGAAAGCAAGTGGGAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TQSYGCSDRDVHRVP*ENGRGDALKASGRS Trigger: GCTCCTCCCACTTGCTTTCAGTGCATCCCCACGTCCATTCTCTCATGGAACCCTGTGCACATCTCTATCTGAGCACCCGTAAGACTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000514726.1 ENST00000649531.1 |
||
| CDS GCA 90 bp | ATGAACCCAGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTaGGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTC | + |
|
Preference number: 5 (lower is better) Translates to: MNPVPQMEMQKSPVF*VAHAGSCRPELFLF Trigger: GAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACTGGGTTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649531.1 |
||
| CDS TCA 90 bp | GAGATTTACGAGGAATGTGCTTCGGATCAACACCTGTGGAAAGAATaGGTTGGAAGCAGGATGGGGCAGATGAAGAAGCTGAGCACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: EIYEECASDQHLWKE*VGSRMGQMKKLSTD Trigger: ATCAGTGCTCAGCTTCTTCATCTGCCCCATCCTGCTTCCAACTCATTCTTTCCACAGGTGTTGATCCGAAGCACATTCCTCGTAAATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649531.1 |
||
| CDS CCA 90 bp | TTCACTCATTCATTCATTCAGTGTGCCAGATTCGGTGCTGGATTCTaGGGGACAAGGTACAAAGTGAAGTTTACAGTCAACACGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: FTHSFIQCARFGAGF*GTRYKVKFTVNTEM Trigger: CATCTCCGTGTTGACTGTAAACTTCACTTTGTACCTTGTCCCCCAGAATCCAGCACCGAATCTGGCACACTGAATGAATGAATGAGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000514726.1 ENST00000649531.1 |
||
| CDS GCA 72 bp | CTCTCTGGGCCTCAGGTGCCACATCTCAGATGGAAATaGAGAAATCACCCGTCTTCTGCGTCGCTCACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSGPQVPHLRWK*RNHPSSASLTL Trigger: CAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGATGTGGCACCTGAGGCCCAGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514726.1 |
||
| CDS TCA 72 bp | ACAGGGTTCCATGAGAGAATGGACGTGGGGATGCACTaGAAGCAAGTGGGAGGAGCCAGGATGTTGCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: TGFHERMDVGMH*KQVGGARMLLP Trigger: AGGCAGCAACATCCTGGCTCCTCCCACTTGCTTTCAGTGCATCCCCACGTCCATTCTCTCATGGAACCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000514726.1 ENST00000649531.1 |
||
| CDS CCA 72 bp | ATGAGAGAATGGACGTGGGGATGCACTGAAAGCAAGTaGGAGGAGCCAGGATGTTGCTGCCTCCTCAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: MREWTWGCTESK*EEPGCCCLLRG Trigger: ACCTCTGAGGAGGCAGCAACATCCTGGCTCCTCCCACTTGCTTTCAGTGCATCCCCACGTCCATTCTCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000514726.1 ENST00000649531.1 |
||
| CDS CAA 72 bp | GGTGTTTCACTTGTGGACTGGGTGATGCTGGGTAAGTaGCTGAACGTCTCTCTGGGCCTCAGGTGCCACATC | + |
|
Preference number: 6 (lower is better) Translates to: GVSLVDWVMLGK*LNVSLGLRCHI Trigger: GATGTGGCACCTGAGGCCCAGAGAGACGTTCAGCAACTTACCCAGCATCACCCAGTCCACAAGTGAAACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514726.1 |
||
| CDS GCA 72 bp | GCAGAACACAGTCTTACGGGTGCTCAGATAGAGATGTaGACAGGGTTCCATGAGAGAATGGACGTGGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: AEHSLTGAQIEM*TGFHERMDVGM Trigger: CATCCCCACGTCCATTCTCTCATGGAACCCTGTGCACATCTCTATCTGAGCACCCGTAAGACTGTGTTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000514726.1 ENST00000649531.1 |
||
| CDS CAA 72 bp | TCTCAGCTACTCGGGAGGCTGAGGCAGGATAATCGTTaGAATCCCAGTGGCAGAGGTTGTAGTGAGCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SQLLGRLRQDNR*NPSGRGCSELR Trigger: TCTCAGCTCACTACAACCTCTGCCACTGGGATTCAAACGATTATCCTGCCTCAGCCTCCCGAGTAGCTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514726.1 |
||
| CDS CCA 72 bp | ATGTGCTTCGGATCAACACCTGTGGAAAGAATGAGTTaGAAGCAGGATGGGGCAGATGAAGAAGCTGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: MCFGSTPVERMS*KQDGADEEAEH Trigger: GTGCTCAGCTTCTTCATCTGCCCCATCCTGCTTCCAACTCATTCTTTCCACAGGTGTTGATCCGAAGCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649531.1 |
||
| CDS GCA 72 bp | GGTTCCCAGAAGCTAGCTCTGAGATGGAGATTTGTATaGAGGAGATTTACGAGGAATGTGCTTCGGATCAAC | + |
|
Preference number: 6 (lower is better) Translates to: GSQKLALRWRFV*RRFTRNVLRIN Trigger: GTTGATCCGAAGCACATTCCTCGTAAATCTCCTGCATACAAATCTCCATCTCAGAGCTAGCTTCTGGGAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000514726.1 ENST00000649531.1 |
||
| CDS CCA 72 bp | TCATTCATTCAGTGTGCCAGATTCGGTGCTGGATTCTaGGGGACAAGGTACAAAGTGAAGTTTACAGTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SFIQCARFGAGF*GTRYKVKFTVN Trigger: GTTGACTGTAAACTTCACTTTGTACCTTGTCCCCCAGAATCCAGCACCGAATCTGGCACACTGAATGAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000514726.1 ENST00000649531.1 |
||
| CDS CCA 72 bp | CACTCATTCATTCATTCAGTGTGCCAGATTCGGTGCTaGATTCTGGGGGACAAGGTACAAAGTGAAGTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: HSFIHSVCQIRC*ILGDKVQSEVY Trigger: GTAAACTTCACTTTGTACCTTGTCCCCCAGAATCCAGCACCGAATCTGGCACACTGAATGAATGAATGAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000514726.1 ENST00000649531.1 |
||
| CDS CAA 90 bp | TCCTGTAACAAAAGTCAAGACAGAGTGGCTTGTAAACAACAGACATaGACTTCTTATAGTTCTGGAGGCTGGAAGTCAGATCAGGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SCNKSQDRVACKQQT*TSYSSGGWKSDQGH Trigger: GTGGCCCTGATCTGACTTCCAGCCTCCAGAACTATAAGAAGTCAATGTCTGTTGTTTACAAGCCACTCTGTCTTGACTTTTGTTACAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514726.1 |
||
| CDS CAA 90 bp | CGTGAGCCACTGTGCCCAGTCTCAGATAGGGTTATCTTAGTTAATTaGGGCTCCTGTAACAAAAGTCAAGACAGAGTGGCTTGTAAACAA | + |
|
Preference number: 6 (lower is better) Translates to: REPLCPVSDRVILVN*GSCNKSQDRVACKQ Trigger: TTGTTTACAAGCCACTCTGTCTTGACTTTTGTTACAGGAGCCCAAATTAACTAAGATAACCCTATCTGAGACTGGGCACAGTGGCTCACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514726.1 |
||
| CDS GCA 72 bp | CTAGTTGGCTTCTGTGTGTTCCATAGCCTTGCCATGTaGCTTGGACCATGCAATATTGATGATGATACAAGT | + |
|
Preference number: 6 (lower is better) Translates to: LVGFCVFHSLAM*LGPCNIDDDTS Trigger: ACTTGTATCATCATCAATATTGCATGGTCCAAGGCACATGGCAAGGCTATGGAACACACAGAAGCCAACTAG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000514726.1 ENST00000649531.1 |
||
| CDS CCA 72 bp | AAACAACAGACATTGACTTCTTATAGTTCTGGAGGCTaGAAGTCAGATCAGGGCCACAACAACTTTCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: KQQTLTSYSSGG*KSDQGHNNFLV Trigger: AACCAGAAAGTTGTTGTGGCCCTGATCTGACTTCCAGCCTCCAGAACTATAAGAAGTCAATGTCTGTTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514726.1 |
||
| CDS CAA 90 bp | CAGTGTACCGGGTGCTGTGCTAAATGTGCTTCAAACAACATTTCATaGAACTCCCACGACTCAATGAATTCATTTCTATTGCAGATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QCTGCCAKCASNNIS*NSHDSMNSFLLQMK Trigger: CTTCATCTGCAATAGAAATGAATTCATTGAGTCGTGGGAGTTCAATGAAATGTTGTTTGAAGCACATTTAGCACAGCACCCGGTACACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000514726.1 ENST00000649531.1 |
||