Pregenerated sensors for LINC02069 (Homo sapiens)
Ensembl gene IDs: ENSG00000229433Ensembl transcript IDs: ENST00000457449.1, ENST00000657359.1, ENST00000665196.1
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCTCCCCCAGGAGGGAACTGCGGCGCAGAGAGGCTAGTGTGGAGGTaGGCTGAGGGCCTTTCACTACGCAGCTCTGCTTCCTTGGCGTTA | + |
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Preference number: 5 (lower is better) Translates to: PPPGGNCGAERLVWR*AEGLSLRSSASLAL Trigger: TAACGCCAAGGAAGCAGAGCTGCGTAGTGAAAGGCCCTCAGCCCACCTCCACACTAGCCTCTCTGCGCCGCAGTTCCCTCCTGGGGGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS CCA 90 bp | CTCCATCCTCCCCCAGGAGGGAACTGCGGCGCAGAGAGGCTAGTGTaGAGGTGGGCTGAGGGCCTTTCACTACGCAGCTCTGCTTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: LHPPPGGNCGAERLV*RWAEGLSLRSSASL Trigger: CAAGGAAGCAGAGCTGCGTAGTGAAAGGCCCTCAGCCCACCTCCACACTAGCCTCTCTGCGCCGCAGTTCCCTCCTGGGGGAGGATGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS GCA 90 bp | CAGAGGAGAGTGCACACCCTGCCCCCTGTCTGGCTCAGCAGCCAATaGCCCTCGGTGCTAGGATGCTCCTTCCACACCTATCTGAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: QRRVHTLPPVWLSSQ*PSVLGCSFHTYLSQ Trigger: CTGGCTCAGATAGGTGTGGAAGGAGCATCCTAGCACCGAGGGGCATTGGCTGCTGAGCCAGACAGGGGGCAGGGTGTGCACTCTCCTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS GCA 90 bp | CTGCCCCCTGTCTGGCTCAGCAGCCAATGCCCCTCGGTGCTAGGATaGTCCTTCCACACCTATCTGAGCCAGGGTCACCACTCTTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: LPPVWLSSQCPSVLG*SFHTYLSQGHHSSS Trigger: AGAGGAAGAGTGGTGACCCTGGCTCAGATAGGTGTGGAAGGAGCATCCTAGCACCGAGGGGCATTGGCTGCTGAGCCAGACAGGGGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS GCA 90 bp | TGTTTCCGTCACAGAGAGGGCTGCATCACTGGTTCCTGGCCCAGCTaGTCTTCCCCAGGCCCACGGGTTCTCACAGCTGGTGAGGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: CFRHREGCITGSWPS*SSPGPRVLTAGEVE Trigger: TTCCACCTCACCAGCTGTGAGAACCCGTGGGCCTGGGGAAGAGCAGCTGGGCCAGGAACCAGTGATGCAGCCCTCTCTGTGACGGAAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457449.1 ENST00000665196.1 |
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| CDS TCA 90 bp | GGAAGACCCGGGGCCCACCGTGGGTCACCTTTGCCGTCTCACTTGTaGATACCTGCCAGTGTCCCAGTAGATGAAGCCGACAGACAGCTC | + |
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Preference number: 5 (lower is better) Translates to: GRPGAHRGSPLPSHL*IPASVPVDEADRQL Trigger: GAGCTGTCTGTCGGCTTCATCTACTGGGACACTGGCAGGTATTCACAAGTGAGACGGCAAAGGTGACCCACGGTGGGCCCCGGGTCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS TCA 90 bp | TGCTTCCTTGGCGTTAATGACCTCCCCGCCCTGTCTCTGATCCCCTaGGCTGCCCACATCAGCGCTGGGCACACTCATAGCTCCTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: CFLGVNDLPALSLIP*AAHISAGHTHSSLE Trigger: CTCCAAGGAGCTATGAGTGTGCCCAGCGCTGATGTGGGCAGCTCAGGGGATCAGAGACAGGGCGGGGAGGTCATTAACGCCAAGGAAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS CCA 90 bp | CTCAGGCCCAGTGAAGGTGTGTCCCATGGGCCACGGGATCTCGCCTaGCAGAGATCTGCTTTAAGATGCCATCTCCAGGAGCCAAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: LRPSEGVSHGPRDLA*QRSALRCHLQEPRS Trigger: TGACCTTGGCTCCTGGAGATGGCATCTTAAAGCAGATCTCTGCCAGGCGAGATCCCGTGGCCCATGGGACACACCTTCACTGGGCCTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457449.1 ENST00000657359.1 ENST00000665196.1 |
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| CDS GCA 90 bp | CCAGGACTGCAGTGTGTCTGTTCTAGAACAGCAAAGACTGGACTTTaGCTCTGCAGGCCCAGAGGAGAGTGCACACCCTGCCCCCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: PGLQCVCSRTAKTGL*LCRPRGECTPCPLS Trigger: AGACAGGGGGCAGGGTGTGCACTCTCCTCTGGGCCTGCAGAGGCAAAGTCCAGTCTTTGCTGTTCTAGAACAGACACACTGCAGTCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS GCA 90 bp | TCCCATGGGCCACGGGATCTCGCCTGGCAGAGATCTGCTTTAAGATaGCATCTCCAGGAGCCAAGGTCATCTCCAGAATCTCTCCCCACA | + |
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Preference number: 5 (lower is better) Translates to: SHGPRDLAWQRSALR*HLQEPRSSPESLPT Trigger: TGTGGGGAGAGATTCTGGAGATGACCTTGGCTCCTGGAGATGGCATCTTAAAGCAGATCTCTGCCAGGCGAGATCCCGTGGCCCATGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457449.1 ENST00000657359.1 ENST00000665196.1 |
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| CDS GCA 90 bp | AACAGGATCCAGAGGGGGCTGGGAGTTCGGTGTGTCCCTAGAATATaGACAGAGGAGCGGGTCAGGGTGATGGACGAGCTCAGAGTCAAA | + |
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Preference number: 5 (lower is better) Translates to: NRIQRGLGVRCVPRI*TEERVRVMDELRVK Trigger: TTTGACTCTGAGCTCGTCCATCACCCTGACCCGCTCCTCTGTGCATATTCTAGGGACACACCGAACTCCCAGCCCCCTCTGGATCCTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS CCA 90 bp | TCCCCTGAGCTGCCCACATCAGCGCTGGGCACACTCATAGCTCCTTaGAGACTGGCCACTGTTTTCCCTCGGAGACAGATGACCTTCATA | + |
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Preference number: 5 (lower is better) Translates to: SPELPTSALGTLIAP*RLATVFPRRQMTFI Trigger: TATGAAGGTCATCTGTCTCCGAGGGAAAACAGTGGCCAGTCTCCAAGGAGCTATGAGTGTGCCCAGCGCTGATGTGGGCAGCTCAGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS GCA 90 bp | CCACATCTTCCCAACAGAGCAGTGTTGAGTCAGCTCCCCTTTTTCTaGCTCTCCGAGGTACTCTCAGCCATGCCCTCCTTCTGGCTTTCG | + |
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Preference number: 5 (lower is better) Translates to: PHLPNRAVLSQLPFF*LSEVLSAMPSFWLS Trigger: CGAAAGCCAGAAGGAGGGCATGGCTGAGAGTACCTCGGAGAGGCAGAAAAAGGGGAGCTGACTCAACACTGCTCTGTTGGGAAGATGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000457449.1 ENST00000657359.1 ENST00000665196.1 |
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| CDS TCA 90 bp | CCGAGGTACTCTCAGCCATGCCCTCCTTCTGGCTTTCGTAGGATCTaGCTCAAGATCCACTTTAGGCAGGCAGTATCTGTGGAACCTTCT | + |
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Preference number: 5 (lower is better) Translates to: PRYSQPCPPSGFRRI*LKIHFRQAVSVEPS Trigger: AGAAGGTTCCACAGATACTGCCTGCCTAAAGTGGATCTTGAGTCAGATCCTACGAAAGCCAGAAGGAGGGCATGGCTGAGAGTACCTCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457449.1 ENST00000657359.1 ENST00000665196.1 |
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| CDS TCA 90 bp | GAGTTCGGTGTGTCCCTAGAATATGCACAGAGGAGCGGGTCAGGGTaGTGGACGAGCTCAGAGTCAAAGAGAATGAGAAGCCAAGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: EFGVSLEYAQRSGSG*WTSSESKRMRSQGN Trigger: GTTTCCTTGGCTTCTCATTCTCTTTGACTCTGAGCTCGTCCATCACCCTGACCCGCTCCTCTGTGCATATTCTAGGGACACACCGAACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS CCA 90 bp | TGCCTGGGTCCTACTCCAGATCAATTAAATCAGAACCTCTGGTGGTaGGGTCCAGGCATGGGGGTGTTTAAAAACTCCGCGGGTGATTCT | + |
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Preference number: 5 (lower is better) Translates to: CLGPTPDQLNQNLWW*GPGMGVFKNSAGDS Trigger: AGAATCACCCGCGGAGTTTTTAAACACCCCCATGCCTGGACCCCACCACCAGAGGTTCTGATTTAATTGATCTGGAGTAGGACCCAGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000657359.1 |
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| CDS TCA 90 bp | ACCCTCCCCAACGAAAGTGCCTGGCTGTGGTACTTGACACAGAGATaGATAGAGAGAGAGAGAGAAACACACACAAGACAGAGAGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: TLPNESAWLWYLTQR*IERERETHTRQRER Trigger: CCTCTCTCTCTGTCTTGTGTGTGTTTCTCTCTCTCTCTCTATTCATCTCTGTGTCAAGTACCACAGCCAGGCACTTTCGTTGGGGAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS TCA 90 bp | CTCCAGGGCCTCCAGCTTGACATGCAGATTTATGTAAAAGAGACCTaGCATGCAAATGAGCCAGGCCTGTGTCTTGTTTCCGTCACAGAG | + |
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Preference number: 5 (lower is better) Translates to: LQGLQLDMQIYVKET*HANEPGLCLVSVTE Trigger: CTCTGTGACGGAAACAAGACACAGGCCTGGCTCATTTGCATGTCAGGTCTCTTTTACATAAATCTGCATGTCAAGCTGGAGGCCCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457449.1 ENST00000665196.1 |
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| CDS GCA 72 bp | CCTGCAGGCCAGCTCCATCCTCCCCCAGGAGGGAACTaGGGCGCAGAGAGGCTAGTGTGGAGGTGGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: PAGQLHPPPGGN*GAERLVWRWAE Trigger: CTCAGCCCACCTCCACACTAGCCTCTCTGCGCCGCAGTTCCCTCCTGGGGGAGGATGGAGCTGGCCTGCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS CCA 72 bp | GGCCCACGGGTTCTCACAGCTGGTGAGGTGGAACCATaGGGCCGTTCTCCCTGTGCTGCCCCTGCTCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GPRVLTAGEVEP*GRSPCAAPARS Trigger: GCTCCGAGCAGGGGCAGCACAGGGAGAACGGCCCCATGGTTCCACCTCACCAGCTGTGAGAACCCGTGGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457449.1 ENST00000665196.1 |
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| CDS GCA 72 bp | CTTTGCCTCTGCAGGCCCAGAGGAGAGTGCACACCCTaGCCCCTGTCTGGCTCAGCAGCCAATGCCCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: LCLCRPRGECTP*PLSGSAANAPR Trigger: CCGAGGGGCATTGGCTGCTGAGCCAGACAGGGGGCAGGGTGTGCACTCTCCTCTGGGCCTGCAGAGGCAAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS CCA 72 bp | CAGGCCCAGAGGAGAGTGCACACCCTGCCCCCTGTCTaGCTCAGCAGCCAATGCCCCTCGGTGCTAGGATGC | + |
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Preference number: 6 (lower is better) Translates to: QAQRRVHTLPPV*LSSQCPSVLGC Trigger: GCATCCTAGCACCGAGGGGCATTGGCTGCTGAGCCAGACAGGGGGCAGGGTGTGCACTCTCCTCTGGGCCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS CAA 90 bp | GGAAATGACGGGAGAGGAGTGCAGGGAGACACCCGAGCTGCCCTCTaGGAAGAACTAGCAGTGGCTTGGCTGCCGTCAGCGCCGCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: GNDGRGVQGDTRAAL*EELAVAWLPSAPPP Trigger: AGGCGGCGGCGCTGACGGCAGCCAAGCCACTGCTAGTTCTTCCAAGAGGGCAGCTCGGGTGTCTCCCTGCACTCCTCTCCCGTCATTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS GCA 72 bp | CACAGAGAGGGCTGCATCACTGGTTCCTGGCCCAGCTaGTCTTCCCCAGGCCCACGGGTTCTCACAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: HREGCITGSWPS*SSPGPRVLTAG Trigger: ACCAGCTGTGAGAACCCGTGGGCCTGGGGAAGAGCAGCTGGGCCAGGAACCAGTGATGCAGCCCTCTCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457449.1 ENST00000665196.1 |
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| CDS CAA 72 bp | GGGAGAGGAGTGCAGGGAGACACCCGAGCTGCCCTCTaGGAAGAACTAGCAGTGGCTTGGCTGCCGTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: GRGVQGDTRAAL*EELAVAWLPSA Trigger: CGCTGACGGCAGCCAAGCCACTGCTAGTTCTTCCAAGAGGGCAGCTCGGGTGTCTCCCTGCACTCCTCTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS TCA 72 bp | GGCGTTAATGACCTCCCCGCCCTGTCTCTGATCCCCTaGGCTGCCCACATCAGCGCTGGGCACACTCATAGC | + |
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Preference number: 6 (lower is better) Translates to: GVNDLPALSLIP*AAHISAGHTHS Trigger: GCTATGAGTGTGCCCAGCGCTGATGTGGGCAGCTCAGGGGATCAGAGACAGGGCGGGGAGGTCATTAACGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS GCA 72 bp | GTGCACACCCTGCCCCCTGTCTGGCTCAGCAGCCAATaGCCCTCGGTGCTAGGATGCTCCTTCCACACCTAT | + |
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Preference number: 6 (lower is better) Translates to: VHTLPPVWLSSQ*PSVLGCSFHTY Trigger: ATAGGTGTGGAAGGAGCATCCTAGCACCGAGGGGCATTGGCTGCTGAGCCAGACAGGGGGCAGGGTGTGCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS GCA 72 bp | GTCTGGCTCAGCAGCCAATGCCCCTCGGTGCTAGGATaGTCCTTCCACACCTATCTGAGCCAGGGTCACCAC | + |
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Preference number: 6 (lower is better) Translates to: VWLSSQCPSVLG*SFHTYLSQGHH Trigger: GTGGTGACCCTGGCTCAGATAGGTGTGGAAGGAGCATCCTAGCACCGAGGGGCATTGGCTGCTGAGCCAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS GCA 72 bp | CAGAGGGGGCTGGGAGTTCGGTGTGTCCCTAGAATATaGACAGAGGAGCGGGTCAGGGTGATGGACGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: QRGLGVRCVPRI*TEERVRVMDEL Trigger: GAGCTCGTCCATCACCCTGACCCGCTCCTCTGTGCATATTCTAGGGACACACCGAACTCCCAGCCCCCTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS GCA 72 bp | GCCAGGCCTGTGTCTTGTTTCCGTCACAGAGAGGGCTaGATCACTGGTTCCTGGCCCAGCTGCTCTTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: ARPVSCFRHREG*ITGSWPSCSSP Trigger: TGGGGAAGAGCAGCTGGGCCAGGAACCAGTGATGCAGCCCTCTCTGTGACGGAAACAAGACACAGGCCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457449.1 ENST00000665196.1 |
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| CDS CAA 72 bp | GGGGGAAGTGAGGGAGGAGTTGGTGATGATGACAGCTaGACGCTTGGGAGTGGGAACCAGGAGCCACAGGCG | + |
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Preference number: 6 (lower is better) Translates to: GGSEGGVGDDDS*TLGSGNQEPQA Trigger: CGCCTGTGGCTCCTGGTTCCCACTCCCAAGCGTCAAGCTGTCATCATCACCAACTCCTCCCTCACTTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS CAA 90 bp | GTCCCTGCCCACGCCAGCTCTGAATCTTGCAAGCCACTGCACCTTTaGAGAGTTGCTCCCGAACTGCCTCCTACACAGGTGGTTCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: VPAHASSESCKPLHL*RVAPELPPTQVVPK Trigger: CTTGGGAACCACCTGTGTAGGAGGCAGTTCGGGAGCAACTCTCAAAAGGTGCAGTGGCTTGCAAGATTCAGAGCTGGCGTGGGCAGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457449.1 ENST00000657359.1 ENST00000665196.1 |
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| CDS GCA 72 bp | GTCCCATGGGCCACGGGATCTCGCCTGGCAGAGATCTaGTTTAAGATGCCATCTCCAGGAGCCAAGGTCATC | + |
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Preference number: 6 (lower is better) Translates to: VPWATGSRLAEI*FKMPSPGAKVI Trigger: GATGACCTTGGCTCCTGGAGATGGCATCTTAAAGCAGATCTCTGCCAGGCGAGATCCCGTGGCCCATGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457449.1 ENST00000657359.1 ENST00000665196.1 |
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| CDS CCA 72 bp | CTGCCCACATCAGCGCTGGGCACACTCATAGCTCCTTaGAGACTGGCCACTGTTTTCCCTCGGAGACAGATG | + |
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Preference number: 6 (lower is better) Translates to: LPTSALGTLIAP*RLATVFPRRQM Trigger: CATCTGTCTCCGAGGGAAAACAGTGGCCAGTCTCCAAGGAGCTATGAGTGTGCCCAGCGCTGATGTGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS CCA 72 bp | TGGGGTAGCAGCTCTGTGGAGCCAAAGGCCAGATGGTaGAGGTGTCAGCGATGTTTAGGCTGCTGCTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: WGSSSVEPKARW*RCQRCLGCCCA Trigger: AGCACAGCAGCAGCCTAAACATCGCTGACACCTCCACCATCTGGCCTTTGGCTCCACAGAGCTGCTACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657359.1 |
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| CDS CAA 72 bp | GCTGCCCACATCAGCGCTGGGCACACTCATAGCTCCTaGGAGACTGGCCACTGTTTTCCCTCGGAGACAGAT | + |
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Preference number: 6 (lower is better) Translates to: AAHISAGHTHSS*ETGHCFPSETD Trigger: ATCTGTCTCCGAGGGAAAACAGTGGCCAGTCTCCAAGGAGCTATGAGTGTGCCCAGCGCTGATGTGGGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS CCA 72 bp | AGTGAAGGTGTGTCCCATGGGCCACGGGATCTCGCCTaGCAGAGATCTGCTTTAAGATGCCATCTCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: SEGVSHGPRDLA*QRSALRCHLQE Trigger: CTCCTGGAGATGGCATCTTAAAGCAGATCTCTGCCAGGCGAGATCCCGTGGCCCATGGGACACACCTTCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457449.1 ENST00000657359.1 ENST00000665196.1 |
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| CDS CCA 72 bp | AGTTGGGGTAGCAGCTCTGTGGAGCCAAAGGCCAGATaGTGGAGGTGTCAGCGATGTTTAGGCTGCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SWGSSSVEPKAR*WRCQRCLGCCC Trigger: ACAGCAGCAGCCTAAACATCGCTGACACCTCCACCATCTGGCCTTTGGCTCCACAGAGCTGCTACCCCAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657359.1 |
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| CDS CCA 72 bp | TTTCCCTCTGGTTCTCTCCCAAAGTGTGCCCCAAGTTaGGGTAGCAGCTCTGTGGAGCCAAAGGCCAGATGG | + |
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Preference number: 6 (lower is better) Translates to: FPSGSLPKCAPS*GSSSVEPKARW Trigger: CCATCTGGCCTTTGGCTCCACAGAGCTGCTACCCCAACTTGGGGCACACTTTGGGAGAGAACCAGAGGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657359.1 |
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| CDS TCA 72 bp | ACGCCAGCTCTGAATCTTGCAAGCCACTGCACCTTTTaGGAGTTGCTCCCGAACTGCCTCCTACACAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: TPALNLASHCTF*ELLPNCLLHRW Trigger: CCACCTGTGTAGGAGGCAGTTCGGGAGCAACTCTCAAAAGGTGCAGTGGCTTGCAAGATTCAGAGCTGGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457449.1 ENST00000657359.1 ENST00000665196.1 |
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| CDS GCA 72 bp | CAGTGTGTCTGTTCTAGAACAGCAAAGACTGGACTTTaGCTCTGCAGGCCCAGAGGAGAGTGCACACCCTGC | + |
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Preference number: 6 (lower is better) Translates to: QCVCSRTAKTGL*LCRPRGECTPC Trigger: GCAGGGTGTGCACTCTCCTCTGGGCCTGCAGAGGCAAAGTCCAGTCTTTGCTGTTCTAGAACAGACACACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS CAA 72 bp | CACGCCAGCTCTGAATCTTGCAAGCCACTGCACCTTTaGAGAGTTGCTCCCGAACTGCCTCCTACACAGGTG | + |
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Preference number: 6 (lower is better) Translates to: HASSESCKPLHL*RVAPELPPTQV Trigger: CACCTGTGTAGGAGGCAGTTCGGGAGCAACTCTCAAAAGGTGCAGTGGCTTGCAAGATTCAGAGCTGGCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457449.1 ENST00000657359.1 ENST00000665196.1 |
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| CDS GCA 72 bp | CCACGGGATCTCGCCTGGCAGAGATCTGCTTTAAGATaGCATCTCCAGGAGCCAAGGTCATCTCCAGAATCT | + |
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Preference number: 6 (lower is better) Translates to: PRDLAWQRSALR*HLQEPRSSPES Trigger: AGATTCTGGAGATGACCTTGGCTCCTGGAGATGGCATCTTAAAGCAGATCTCTGCCAGGCGAGATCCCGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457449.1 ENST00000657359.1 ENST00000665196.1 |
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| CDS TCA 72 bp | GTGTCCCTAGAATATGCACAGAGGAGCGGGTCAGGGTaGTGGACGAGCTCAGAGTCAAAGAGAATGAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: VSLEYAQRSGSG*WTSSESKRMRS Trigger: GCTTCTCATTCTCTTTGACTCTGAGCTCGTCCATCACCCTGACCCGCTCCTCTGTGCATATTCTAGGGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS TCA 72 bp | CGCGCGCACAGGCTTTGTGAGATCCACATTTACTACTaGGAGGTTTTTCCCTCTGGTTCTCTCCCAAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: RAHRLCEIHIYY*EVFPSGSLPKC Trigger: ACACTTTGGGAGAGAACCAGAGGGAAAAACCTCTCAGTAGTAAATGTGGATCTCACAAAGCCTGTGCGCGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657359.1 |
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| CDS CCA 72 bp | AGGGCTTTCGGAGATGATGTCAGTTTCTCTTTAAGATaGAGCTGTTTTAGTCCCCGTCCTGATGCAGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RAFGDDVSFSLR*SCFSPRPDAAS Trigger: GGAAGCTGCATCAGGACGGGGACTAAAACAGCTCCATCTTAAAGAGAAACTGACATCATCTCCGAAAGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657359.1 |
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| CDS TCA 72 bp | ATCACTTTGCATTACCTGGCTCCAGGGCCTCCAGCTTaGCATGCAGATTTATGTAAAAGAGACCTGACATGC | + |
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Preference number: 6 (lower is better) Translates to: ITLHYLAPGPPA*HADLCKRDLTC Trigger: GCATGTCAGGTCTCTTTTACATAAATCTGCATGTCAAGCTGGAGGCCCTGGAGCCAGGTAATGCAAAGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457449.1 ENST00000665196.1 |
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| CDS GCA 72 bp | AAAAGGAGGTTAGAAATGCACCCTCCCCAACGAAAGTaGCTGGCTGTGGTACTTGACACAGAGATGAATAGA | + |
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Preference number: 6 (lower is better) Translates to: KRRLEMHPPQRK*LAVVLDTEMNR Trigger: TCTATTCATCTCTGTGTCAAGTACCACAGCCAGGCACTTTCGTTGGGGAGGGTGCATTTCTAACCTCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS CCA 72 bp | CATACGCACATGTATATAAACTACACAGGCACGCATTaGCCAGGAGAAAACATTCTGCAGCCATCAGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: HTHMYINYTGTH*PGENILQPSGS Trigger: AGAGCCTGATGGCTGCAGAATGTTTTCTCCTGGCCAATGCGTGCCTGTGTAGTTTATATACATGTGCGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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| CDS CAA 72 bp | ACATACGCACATGTATATAAACTACACAGGCACGCATaGGCCAGGAGAAAACATTCTGCAGCCATCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: TYAHVYKLHRHA*ARRKHSAAIRL Trigger: GAGCCTGATGGCTGCAGAATGTTTTCTCCTGGCCAATGCGTGCCTGTGTAGTTTATATACATGTGCGTATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457449.1 |
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