Pregenerated sensors for LINC02068 (Homo sapiens)
Ensembl gene IDs: ENSG00000223387Ensembl transcript IDs: ENST00000418839.2, ENST00000424941.2, ENST00000441185.6
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGGTCGCTCATTCACTCACGGCTTCCCTGGATGGGGAGGTTCCCCTaGCTCCATGTTTCTCCCGTGTGGGCGGTTGTCCTGCCCTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: GSLIHSRLPWMGRFP*LHVSPVWAVVLPCF Trigger: AAAGCAGGGCAGGACAACCGCCCACACGGGAGAAACATGGAGCCAGGGGAACCTCCCCATCCAGGGAAGCCGTGAGTGAATGAGCGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 90 bp | CCCAAACACTGGGAGCGCTGTCCCAGAGAGTTATGGAGCTGCTACTaGCTCAATATCCCTGGCAGGGGGTGGGTGGAGACCCAGGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PKHWERCPRELWSCY*LNIPGRGWVETQAR Trigger: CCTGGCCTGGGTCTCCACCCACCCCCTGCCAGGGATATTGAGCCAGTAGCAGCTCCATAACTCTCTGGGACAGCGCTCCCAGTGTTTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS GCA 90 bp | CCAACCCCCAAACACTGGGAGCGCTGTCCCAGAGAGTTATGGAGCTaGTACTGGCTCAATATCCCTGGCAGGGGGTGGGTGGAGACCCAG | + |
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Preference number: 5 (lower is better) Translates to: PTPKHWERCPRELWS*YWLNIPGRGWVETQ Trigger: CTGGGTCTCCACCCACCCCCTGCCAGGGATATTGAGCCAGTAGCAGCTCCATAACTCTCTGGGACAGCGCTCCCAGTGTTTGGGGGTTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 90 bp | GCGCTGTCCCAGAGAGTTATGGAGCTGCTACTGGCTCAATATCCCTaGCAGGGGGTGGGTGGAGACCCAGGCCAGGAGGACTCATCCAGT | + |
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Preference number: 5 (lower is better) Translates to: ALSQRVMELLLAQYP*QGVGGDPGQEDSSS Trigger: ACTGGATGAGTCCTCCTGGCCTGGGTCTCCACCCACCCCCTGCCAGGGATATTGAGCCAGTAGCAGCTCCATAACTCTCTGGGACAGCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 90 bp | ACTGGGAATGTTCAGCCAGTGAGGTGGGTGGCTGCACTGCTGGTGTaGGTTGGAGGCTCCACTTGTTGGGGAGCAGGGGTTCAAGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: TGNVQPVRWVAALLV*VGGSTCWGAGVQGL Trigger: GAGCCCTTGAACCCCTGCTCCCCAACAAGTGGAGCCTCCAACTCACACCAGCAGTGCAGCCACCCACCTCACTGGCTGAACATTCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 90 bp | AAACTCCAGGCCACTACCGGTGGGTTTGCTCAGCTGTGGGTGACGTaGCTGTTCTGTGGTCATGAACCAGGGGCCCTGCCTGGTGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: KLQATTGGFAQLWVT*LFCGHEPGALPGEE Trigger: CTCTTCACCAGGCAGGGCCCCTGGTTCATGACCACAGAACAGTCACGTCACCCACAGCTGAGCAAACCCACCGGTAGTGGCCTGGAGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 90 bp | CTGGTGACAAGCAGCAGGGGTGGATGGGACCTGTGGGAGATGGACTaGTCTCCTCTCCTTGGGTTAACTGCAGCTTGTTGGGGGTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: LVTSSRGGWDLWEMD*SPLLGLTAACWGCG Trigger: TCCACACCCCCAACAAGCTGCAGTTAACCCAAGGAGAGGAGACCAGTCCATCTCCCACAGGTCCCATCCACCCCTGCTGCTTGTCACCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 90 bp | ACAGGATGGTGGTGCTGGAGTCTCAGGTCGGGCAGCCCTATGCAGTaGGGACTGGGACTTGTGGGGAACAGTCTGACCGCTTTTCTAAGG | + |
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Preference number: 5 (lower is better) Translates to: TGWWCWSLRSGSPMQ*GLGLVGNSLTAFLR Trigger: CCTTAGAAAAGCGGTCAGACTGTTCCCCACAAGTCCCAGTCCTCACTGCATAGGGCTGCCCGACCTGAGACTCCAGCACCACCATCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS GCA 90 bp | CCAGGATATCTAAGGCTCCTGGGGCTCCGTGTGTACCTGAGCGGCTaGTCTGCCAAGACTCCCCATAGCTCTGTGTATCTGACTGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: PGYLRLLGLRVYLSG*SAKTPHSSVYLTEG Trigger: GCCTTCAGTCAGATACACAGAGCTATGGGGAGTCTTGGCAGAGCAGCCGCTCAGGTACACACGGAGCCCCAGGAGCCTTAGATATCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS GCA 90 bp | CAGAGTCACTGTTACTGGGAATGTTCAGCCAGTGAGGTGGGTGGCTaGACTGCTGGTGTGAGTTGGAGGCTCCACTTGTTGGGGAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: QSHCYWECSASEVGG*TAGVSWRLHLLGSR Trigger: CCTGCTCCCCAACAAGTGGAGCCTCCAACTCACACCAGCAGTGCAGCCACCCACCTCACTGGCTGAACATTCCCAGTAACAGTGACTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 90 bp | AGAGAGTTATGGAGCTGCTACTGGCTCAATATCCCTGGCAGGGGGTaGGTGGAGACCCAGGCCAGGAGGACTCATCCAGTGAGGAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: RELWSCYWLNIPGRG*VETQARRTHPVRRN Trigger: GTTTCTCCTCACTGGATGAGTCCTCCTGGCCTGGGTCTCCACCCACCCCCTGCCAGGGATATTGAGCCAGTAGCAGCTCCATAACTCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 90 bp | ACCCCAAGAAATGCAGAGTCACTGTTACTGGGAATGTTCAGCCAGTaGGGTGGGTGGCTGCACTGCTGGTGTGAGTTGGAGGCTCCACTT | + |
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Preference number: 5 (lower is better) Translates to: TPRNAESLLLGMFSQ*GGWLHCWCELEAPL Trigger: AAGTGGAGCCTCCAACTCACACCAGCAGTGCAGCCACCCACCTCACTGGCTGAACATTCCCAGTAACAGTGACTCTGCATTTCTTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 90 bp | GTGTCCTTCAGGAGGTATTCCAGAAGGTGTTGTTGTCATAGGAGGTaGCAGCTCCATGCACGTTACTGCCCGCCTCTCCCTTCCTGGACT | + |
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Preference number: 5 (lower is better) Translates to: VSFRRYSRRCCCHRR*QLHARYCPPLPSWT Trigger: AGTCCAGGAAGGGAGAGGCGGGCAGTAACGTGCATGGAGCTGTCACCTCCTATGACAACAACACCTTCTGGAATACCTCCTGAAGGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424941.2 |
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| CDS TCA 90 bp | AAAGATACCAGTGTAGTGACTGGGACCTTTGTTCCTTCCCCAGCCTaGGGTCTGTTAGGGCAGTACCACTGCAACTGCAGAGGCGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: KDTSVVTGTFVPSPA*GLLGQYHCNCRGEG Trigger: ACCTTCGCCTCTGCAGTTGCAGTGGTACTGCCCTAACAGACCTCAGGCTGGGGAAGGAACAAAGGTCCCAGTCACTACACTGGTATCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 90 bp | GCGGGTGGGGATTCCCAGGAAAGAGAAACTGAACTCCTTTCCATATaGTGGCTGCGGTGCACTAAAGATACCAGTGTAGTGACTGGGACC | + |
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Preference number: 5 (lower is better) Translates to: AGGDSQERETELLSI*WLRCTKDTSVVTGT Trigger: GGTCCCAGTCACTACACTGGTATCTTTAGTGCACCGCAGCCACCATATGGAAAGGAGTTCAGTTTCTCTTTCCTGGGAATCCCCACCCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 90 bp | GGCTCACTGAGAGGAGATAATGGTCTCCTCTCCATGTGGTCACTGTaGTGGAGAGACTGTCATATACCTCTGAGAGCTTTTCCCCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: GSLRGDNGLLSMWSL*WRDCHIPLRAFPQG Trigger: TCCCTGGGGAAAAGCTCTCAGAGGTATATGACAGTCTCTCCACCACAGTGACCACATGGAGAGGAGACCATTATCTCCTCTCAGTGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 90 bp | CACTCTGGTATTTATTTCCTCTTCGAAGAAATGCGGGGGTGCCTCTaGTTGAAGTGGTCAGGCGGAAACAGGATGGTGGTGCTGGAGTCT | + |
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Preference number: 5 (lower is better) Translates to: HSGIYFLFEEMRGCL*LKWSGGNRMVVLES Trigger: AGACTCCAGCACCACCATCCTGTTTCCGCCTGACCACTTCAATCAGAGGCACCCCCGCATTTCTTCGAAGAGGAAATAAATACCAGAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 90 bp | CTGCCCGCCTCTCCCTCTGATGGAGGACTAGGGATTTCTGGGACTTaGACTCCTGTTATAGAAGGTCAGATTAGCCTTAAGCTGAACAGC | + |
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Preference number: 5 (lower is better) Translates to: LPASPSDGGLGISGT*TPVIEGQISLKLNS Trigger: GCTGTTCAGCTTAAGGCTAATCTGACCTTCTATAACAGGAGTTCAAGTCCCAGAAATCCCTAGTCCTCCATCAGAGGGAGAGGCGGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441185.6 |
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| CDS CCA 90 bp | GGTCTGTTAGGGCAGTACCACTGCAACTGCAGAGGCGAAGGTTTGTaGGTTCACTCTGGTATTTATTTCCTCTTCGAAGAAATGCGGGGG | + |
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Preference number: 5 (lower is better) Translates to: GLLGQYHCNCRGEGL*VHSGIYFLFEEMRG Trigger: CCCCCGCATTTCTTCGAAGAGGAAATAAATACCAGAGTGAACCCACAAACCTTCGCCTCTGCAGTTGCAGTGGTACTGCCCTAACAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 90 bp | CTCTATATTTCCTCATGGTTGCAGCTGGGCTACCTCTCAATGCTCTaGAAGTGTGGACTCCTCTCCCATTTGAGTGCTGGCTACAGATTG | + |
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Preference number: 5 (lower is better) Translates to: LYISSWLQLGYLSML*KCGLLSHLSAGYRL Trigger: CAATCTGTAGCCAGCACTCAAATGGGAGAGGAGTCCACACTTTCAGAGCATTGAGAGGTAGCCCAGCTGCAACCATGAGGAAATATAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 90 bp | CTTTCCCAGTCATGTGACTCCTCTATATTTCCTCATGGTTGCAGCTaGGCTACCTCTCAATGCTCTGAAAGTGTGGACTCCTCTCCCATT | + |
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Preference number: 5 (lower is better) Translates to: LSQSCDSSIFPHGCS*ATSQCSESVDSSPI Trigger: AATGGGAGAGGAGTCCACACTTTCAGAGCATTGAGAGGTAGCCCAGCTGCAACCATGAGGAAATATAGAGGAGTCACATGACTGGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 90 bp | CACACTAGCTGCTTCTCTGATGGAGGACTAGGGATTTCTGGGACTTaGACTCCTGTTATAGAAGGTCAGATTAGCCTTAAGCTGAACAGC | + |
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Preference number: 5 (lower is better) Translates to: HTSCFSDGGLGISGT*TPVIEGQISLKLNS Trigger: GCTGTTCAGCTTAAGGCTAATCTGACCTTCTATAACAGGAGTTCAAGTCCCAGAAATCCCTAGTCCTCCATCAGAGAAGCAGCTAGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 90 bp | GTAATGAGTGAAGCCTCTGATGGAGGACTAGGGATTTCTGGGACTTaGACTCCTGTTATAGAAGGTCAGATTAGCCTTAAGCTGAACAGC | + |
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Preference number: 5 (lower is better) Translates to: VMSEASDGGLGISGT*TPVIEGQISLKLNS Trigger: GCTGTTCAGCTTAAGGCTAATCTGACCTTCTATAACAGGAGTTCAAGTCCCAGAAATCCCTAGTCCTCCATCAGAGGCTTCACTCATTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424941.2 |
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| CDS TCA 90 bp | TCCCCAGCTTGGTCTATTCTGCTGTTAATACTTGCGATTGCATTGTaGAATTCTTGCAGTGTGCTTTTCAGCTCTATCAGATCAGTTAGG | + |
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Preference number: 5 (lower is better) Translates to: SPAWSILLLILAIAL*NSCSVLFSSIRSVR Trigger: CCTAACTGATCTGATAGAGCTGAAAAGCACACTGCAAGAATTTCACAATGCAATCGCAAGTATTAACAGCAGAATAGACCAAGCTGGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 72 bp | TGGTGCTGGAGTCTCAGGTCGGGCAGCCCTATGCAGTaGGGACTGGGACTTGTGGGGAACAGTCTGACCGCT | + |
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Preference number: 6 (lower is better) Translates to: WCWSLRSGSPMQ*GLGLVGNSLTA Trigger: AGCGGTCAGACTGTTCCCCACAAGTCCCAGTCCTCACTGCATAGGGCTGCCCGACCTGAGACTCCAGCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 72 bp | GCCACTACCGGTGGGTTTGCTCAGCTGTGGGTGACGTaGCTGTTCTGTGGTCATGAACCAGGGGCCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: ATTGGFAQLWVT*LFCGHEPGALP Trigger: AGGCAGGGCCCCTGGTTCATGACCACAGAACAGTCACGTCACCCACAGCTGAGCAAACCCACCGGTAGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 72 bp | ATTCACTCACGGCTTCCCTGGATGGGGAGGTTCCCCTaGCTCCATGTTTCTCCCGTGTGGGCGGTTGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: IHSRLPWMGRFP*LHVSPVWAVVL Trigger: CAGGACAACCGCCCACACGGGAGAAACATGGAGCCAGGGGAACCTCCCCATCCAGGGAAGCCGTGAGTGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 72 bp | CAGAGAGTTATGGAGCTGCTACTGGCTCAATATCCCTaGCAGGGGGTGGGTGGAGACCCAGGCCAGGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: QRVMELLLAQYP*QGVGGDPGQED Trigger: GTCCTCCTGGCCTGGGTCTCCACCCACCCCCTGCCAGGGATATTGAGCCAGTAGCAGCTCCATAACTCTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 72 bp | TGGGAGCGCTGTCCCAGAGAGTTATGGAGCTGCTACTaGCTCAATATCCCTGGCAGGGGGTGGGTGGAGACC | + |
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Preference number: 6 (lower is better) Translates to: WERCPRELWSCY*LNIPGRGWVET Trigger: GGTCTCCACCCACCCCCTGCCAGGGATATTGAGCCAGTAGCAGCTCCATAACTCTCTGGGACAGCGCTCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS GCA 72 bp | CTAAGGCTCCTGGGGCTCCGTGTGTACCTGAGCGGCTaGTCTGCCAAGACTCCCCATAGCTCTGTGTATCTG | + |
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Preference number: 6 (lower is better) Translates to: LRLLGLRVYLSG*SAKTPHSSVYL Trigger: CAGATACACAGAGCTATGGGGAGTCTTGGCAGAGCAGCCGCTCAGGTACACACGGAGCCCCAGGAGCCTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS GCA 72 bp | CCTGGCTCCATGTTTCTCCCGTGTGGGCGGTTGTCCTaGCCTGCTTTTCTCCATTCTCCATGGGTCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: PGSMFLPCGRLS*PAFLHSPWVRL Trigger: CAACCTGACCCATGGAGAATGGAGAAAAGCAGGGCAGGACAACCGCCCACACGGGAGAAACATGGAGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 72 bp | TCCCTGGTGACAAGCAGCAGGGGTGGATGGGACCTGTaGGAGATGGACTGGTCTCCTCTCCTTGGGTTAACT | + |
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Preference number: 6 (lower is better) Translates to: SLVTSSRGGWDL*EMDWSPLLGLT Trigger: AGTTAACCCAAGGAGAGGAGACCAGTCCATCTCCCACAGGTCCCATCCACCCCTGCTGCTTGTCACCAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CAA 90 bp | ACCACAGCTCTGGGGAGATCTCAGGGTTTATGTTTCCTCCCCAGCTaGGAGGCAGCAGAGAGAAGGACCTTAGCAGTGGTTGTGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: TTALGRSQGLCFLPS*EAAERRTLAVVVAG Trigger: CCCAGCCACAACCACTGCTAAGGTCCTTCTCTCTGCTGCCTCCAAGCTGGGGAGGAAACATAAACCCTGAGATCTCCCCAGAGCTGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 72 bp | GCTGCTCTGCCAAGACTCCCCATAGCTCTGTGTATCTaGCTGAAGGCCCTAGTGGAGTGGGTTCATGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: AALPRLPIALCI*LKALVEWVHEG Trigger: CCCCTCATGAACCCACTCCACTAGGGCCTTCAGTCAGATACACAGAGCTATGGGGAGTCTTGGCAGAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 72 bp | GGGTCTTATCCTGTGACCTCTGAAGTGCTATGGAAGTaGGGCCTGCAGATCATCGCTGCTCAGCCCCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: GSYPVTSEVLWK*GLQIIAAQPPG Trigger: TCCAGGGGGCTGAGCAGCGATGATCTGCAGGCCTCACTTCCATAGCACTTCAGAGGTCACAGGATAAGACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 72 bp | GACAGCTCCATGCACGTTACTGCCCGCCTCTCCCTCTaGTGGAGGACTAGGGATTTCTGGGACTTGAACTCC | + |
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Preference number: 6 (lower is better) Translates to: DSSMHVTARLSL*WRTRDFWDLNS Trigger: GGAGTTCAAGTCCCAGAAATCCCTAGTCCTCCATCAGAGGGAGAGGCGGGCAGTAACGTGCATGGAGCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441185.6 |
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| CDS GCA 72 bp | GTGGGAGATGGACTGGTCTCCTCTCCTTGGGTTAACTaGAGCTTGTTGGGGGTGTGGATGAGGCACTTAGGG | + |
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Preference number: 6 (lower is better) Translates to: VGDGLVSSPWVN*SLLGVWMRHLG Trigger: CCCTAAGTGCCTCATCCACACCCCCAACAAGCTGCAGTTAACCCAAGGAGAGGAGACCAGTCCATCTCCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 72 bp | ATGGGACCTGTGGGAGATGGACTGGTCTCCTCTCCTTaGGTTAACTGCAGCTTGTTGGGGGTGTGGATGAGG | + |
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Preference number: 6 (lower is better) Translates to: MGPVGDGLVSSP*VNCSLLGVWMR Trigger: CCTCATCCACACCCCCAACAAGCTGCAGTTAACCCAAGGAGAGGAGACCAGTCCATCTCCCACAGGTCCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 72 bp | CTCCACTTGTTGGGGAGCAGGGGTTCAAGGGCTCACTaGGAGGAGATAATGGTCTCCTCTCCATGTGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: LHLLGSRGSRAH*EEIMVSSPCGH Trigger: GTGACCACATGGAGAGGAGACCATTATCTCCTCTCAGTGAGCCCTTGAACCCCTGCTCCCCAACAAGTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 72 bp | AAGGCAACAAGGACTGAGGCTGTGAAACAGCAAAGATaGCCGCCTACCCCTTCCTCTGAGAGCTCCCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: KATRTEAVKQQR*PPTPSSESSLS Trigger: TGAGAGGGAGCTCTCAGAGGAAGGGGTAGGCGGCCATCTTTGCTGTTTCACAGCCTCAGTCCTTGTTGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 72 bp | GGGCTCCAACCCCAAGAAATGCAGAGTCACTGTTACTaGGAATGTTCAGCCAGTGAGGTGGGTGGCTGCACT | + |
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Preference number: 6 (lower is better) Translates to: GLQPQEMQSHCY*ECSASEVGGCT Trigger: AGTGCAGCCACCCACCTCACTGGCTGAACATTCCCAGTAACAGTGACTCTGCATTTCTTGGGGTTGGAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CAA 72 bp | CTGGGGGCTCCACTCCACAGAGATGCAGGTCAGCAATaGCTCAGTGTGATAGGCCCAAGATGGGTGATCTGT | + |
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Preference number: 6 (lower is better) Translates to: LGAPLHRDAGQQ*LSVIGPRWVIC Trigger: ACAGATCACCCATCTTGGGCCTATCACACTGAGCAATTGCTGACCTGCATCTCTGTGGAGTGGAGCCCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CAA 72 bp | TGTGGACTCCTCTCCCATTTGAGTGCTGGCTACAGATaGAGACTTGGCACTCCTAGGCTGCCCACCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: CGLLSHLSAGYR*RLGTPRLPTTA Trigger: AGCTGTGGTGGGCAGCCTAGGAGTGCCAAGTCTCAATCTGTAGCCAGCACTCAAATGGGAGAGGAGTCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CAA 90 bp | ACTTGTCTCCTGGGGGCTCCACTCCACAGAGATGCAGGTCAGCAATaGCTCAGTGTGATAGGCCCAAGATGGGTGATCTGTACTGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: TCLLGAPLHRDAGQQ*LSVIGPRWVICTVG Trigger: ACCCACAGTACAGATCACCCATCTTGGGCCTATCACACTGAGCAATTGCTGACCTGCATCTCTGTGGAGTGGAGCCCCCAGGAGACAAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 72 bp | ACCTTGCACTCTCTAAAGCCTGAAGGCAACAAGGACTaGGGCTGTGAAACAGCAAAGATGGCCGCCTACCCC | + |
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Preference number: 6 (lower is better) Translates to: TLHSLKPEGNKD*GCETAKMAAYP Trigger: GGGGTAGGCGGCCATCTTTGCTGTTTCACAGCCTCAGTCCTTGTTGCCTTCAGGCTTTAGAGAGTGCAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 72 bp | ATTTCCTCTTCGAAGAAATGCGGGGGTGCCTCTGATTaGAGTGGTCAGGCGGAAACAGGATGGTGGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: ISSSKKCGGASD*SGQAETGWWCW Trigger: CCAGCACCACCATCCTGTTTCCGCCTGACCACTTCAATCAGAGGCACCCCCGCATTTCTTCGAAGAGGAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 72 bp | AGTGTAGTGACTGGGACCTTTGTTCCTTCCCCAGCCTaGGGTCTGTTAGGGCAGTACCACTGCAACTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SVVTGTFVPSPA*GLLGQYHCNCR Trigger: TCTGCAGTTGCAGTGGTACTGCCCTAACAGACCTCAGGCTGGGGAAGGAACAAAGGTCCCAGTCACTACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 72 bp | AATGCAGAGTCACTGTTACTGGGAATGTTCAGCCAGTaGGGTGGGTGGCTGCACTGCTGGTGTGAGTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: NAESLLLGMFSQ*GGWLHCWCELE Trigger: CTCCAACTCACACCAGCAGTGCAGCCACCCACCTCACTGGCTGAACATTCCCAGTAACAGTGACTCTGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 72 bp | TCCTCATGGTTGCAGCTGGGCTACCTCTCAATGCTCTaGAAGTGTGGACTCCTCTCCCATTTGAGTGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SSWLQLGYLSML*KCGLLSHLSAG Trigger: GCCAGCACTCAAATGGGAGAGGAGTCCACACTTTCAGAGCATTGAGAGGTAGCCCAGCTGCAACCATGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS GCA 72 bp | CTCCATGTTTCTCCCGTGTGGGCGGTTGTCCTGCCCTaGTTTTCTCCATTCTCCATGGGTCAGGTTGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: LHVSPVWAVVLP*FSPFSMGQVVF Trigger: GAAAACAACCTGACCCATGGAGAATGGAGAAAAGCAGGGCAGGACAACCGCCCACACGGGAGAAACATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 72 bp | TCCCTCTCAGGGATGTGTAATGCTGCTACCAGCAGCTaGCTAGAGTTCCAAGCCAGTGGGTCTTATCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SLSGMCNAATSS*LEFQASGSYPV Trigger: CACAGGATAAGACCCACTGGCTTGGAACTCTAGCCAGCTGCTGGTAGCAGCATTACACATCCCTGAGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 72 bp | AGAGTTCCAAGCCAGTGGGTCTTATCCTGTGACCTCTaGAGTGCTATGGAAGTGAGGCCTGCAGATCATCGC | + |
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Preference number: 6 (lower is better) Translates to: RVPSQWVLSCDL*SAMEVRPADHR Trigger: GCGATGATCTGCAGGCCTCACTTCCATAGCACTTCAGAGGTCACAGGATAAGACCCACTGGCTTGGAACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS GCA 72 bp | TTTTACTTGTCTCCTGGGGGCTCCACTCCACAGAGATaGAGGTCAGCAATTGCTCAGTGTGATAGGCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: FYLSPGGSTPQR*RSAIAQCDRPK Trigger: CTTGGGCCTATCACACTGAGCAATTGCTGACCTGCATCTCTGTGGAGTGGAGCCCCCAGGAGACAAGTAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 72 bp | GTTGCAGCTGGGCTACCTCTCAATGCTCTGAAAGTGTaGACTCCTCTCCCATTTGAGTGCTGGCTACAGATT | + |
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Preference number: 6 (lower is better) Translates to: VAAGLPLNALKV*TPLPFECWLQI Trigger: AATCTGTAGCCAGCACTCAAATGGGAGAGGAGTCCACACTTTCAGAGCATTGAGAGGTAGCCCAGCTGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 72 bp | ATTTATTTCCTCTTCGAAGAAATGCGGGGGTGCCTCTaGTTGAAGTGGTCAGGCGGAAACAGGATGGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: IYFLFEEMRGCL*LKWSGGNRMVV Trigger: CACCACCATCCTGTTTCCGCCTGACCACTTCAATCAGAGGCACCCCCGCATTTCTTCGAAGAGGAAATAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 72 bp | CTGCAACTGCAGAGGCGAAGGTTTGTGGGTTCACTCTaGTATTTATTTCCTCTTCGAAGAAATGCGGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: LQLQRRRFVGSL*YLFPLRRNAGV Trigger: CACCCCCGCATTTCTTCGAAGAGGAAATAAATACCAGAGTGAACCCACAAACCTTCGCCTCTGCAGTTGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 72 bp | GGAGATAATGGTCTCCTCTCCATGTGGTCACTGTGGTaGAGAGACTGTCATATACCTCTGAGAGCTTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: GDNGLLSMWSLW*RDCHIPLRAFP Trigger: GGGAAAAGCTCTCAGAGGTATATGACAGTCTCTCCACCACAGTGACCACATGGAGAGGAGACCATTATCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 72 bp | GGGCAGTACCACTGCAACTGCAGAGGCGAAGGTTTGTaGGTTCACTCTGGTATTTATTTCCTCTTCGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: GQYHCNCRGEGL*VHSGIYFLFEE Trigger: TTCTTCGAAGAGGAAATAAATACCAGAGTGAACCCACAAACCTTCGCCTCTGCAGTTGCAGTGGTACTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 72 bp | AGTGCAGTATTTACTCGCCCCATCTATTTCTCTCTGTaGGAGCAGTACACACTAGCTGCTTCTCTGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: SAVFTRPIYFSL*EQYTLAASLME Trigger: CTCCATCAGAGAAGCAGCTAGTGTGTACTGCTCTCACAGAGAGAAATAGATGGGGCGAGTAAATACTGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 72 bp | AGGGCTGAGGCTTTGTGCGAGGTCTTTATTTGCAGCTaGCTTCTTATCTTTGGTTTTACAGGGCGGGTATGT | + |
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Preference number: 6 (lower is better) Translates to: RAEALCEVFICS*LLIFGFTGRVC Trigger: ACATACCCGCCCTGTAAAACCAAAGATAAGAAGTCAGCTGCAAATAAAGACCTCGCACAAAGCCTCAGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS GCA 72 bp | CATCTATTTCTCTCTGTGAGAGCAGTACACACTAGCTaGTTCTCTGATGGAGGACTAGGGATTTCTGGGACT | + |
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Preference number: 6 (lower is better) Translates to: HLFLSVRAVHTS*FSDGGLGISGT Trigger: AGTCCCAGAAATCCCTAGTCCTCCATCAGAGAAGCAGCTAGTGTGTACTGCTCTCACAGAGAGAAATAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 72 bp | GATTCCCAGGAAAGAGAAACTGAACTCCTTTCCATATaGTGGCTGCGGTGCACTAAAGATACCAGTGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: DSQERETELLSI*WLRCTKDTSVV Trigger: CACTACACTGGTATCTTTAGTGCACCGCAGCCACCATATGGAAAGGAGTTCAGTTTCTCTTTCCTGGGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CAA 72 bp | TTAGGGCAGTACCACTGCAACTGCAGAGGCGAAGGTTaGTGGGTTCACTCTGGTATTTATTTCCTCTTCGAA | + |
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Preference number: 6 (lower is better) Translates to: LGQYHCNCRGEG*WVHSGIYFLFE Trigger: TTCGAAGAGGAAATAAATACCAGAGTGAACCCACAAACCTTCGCCTCTGCAGTTGCAGTGGTACTGCCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 72 bp | GAAGCCTCTGATGGAGGACTAGGGATTTCTGGGACTTaGACTCCTGTTATAGAAGGTCAGATTAGCCTTAAG | + |
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Preference number: 6 (lower is better) Translates to: EASDGGLGISGT*TPVIEGQISLK Trigger: CTTAAGGCTAATCTGACCTTCTATAACAGGAGTTCAAGTCCCAGAAATCCCTAGTCCTCCATCAGAGGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424941.2 |
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| CDS TCA 72 bp | TCTCCCTCTGATGGAGGACTAGGGATTTCTGGGACTTaGACTCCTGTTATAGAAGGTCAGATTAGCCTTAAG | + |
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Preference number: 6 (lower is better) Translates to: SPSDGGLGISGT*TPVIEGQISLK Trigger: CTTAAGGCTAATCTGACCTTCTATAACAGGAGTTCAAGTCCCAGAAATCCCTAGTCCTCCATCAGAGGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441185.6 |
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| CDS GCA 72 bp | CCCAGCTTGGTCTATTCTGCTGTTAATACTTGCGATTaGATTGTGAAATTCTTGCAGTGTGCTTTTCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: PSLVYSAVNTCD*IVKFLQCAFQL Trigger: GAGCTGAAAAGCACACTGCAAGAATTTCACAATGCAATCGCAAGTATTAACAGCAGAATAGACCAAGCTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 72 bp | GTGCGAGGTCTTTATTTGCAGCTGACTTCTTATCTTTaGTTTTACAGGGCGGGTATGTTAGTGAGATACATC | + |
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Preference number: 6 (lower is better) Translates to: VRGLYLQLTSYL*FYRAGMLVRYI Trigger: GATGTATCTCACTAACATACCCGCCCTGTAAAACCAAAGATAAGAAGTCAGCTGCAAATAAAGACCTCGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 72 bp | AGACACTGGTCATTTGAGTTGCCAGAGTTCTTACATTaGTTCTTTCTCATCTCTGTGTATGGGTGTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: RHWSFELPEFLH*FFLISVYGCSF Trigger: AAAGGAACACCCATACACAGAGATGAGAAAGAACCAATGTAAGAACTCTGGCAACTCAAATGACCAGTGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CCA 72 bp | GAGAACTGGTGCTATTGTTTGGAGTACATAAGACACTaGTCATTTGAGTTGCCAGAGTTCTTACATTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: ENWCYCLEYIRH*SFELPEFLHWF Trigger: GAACCAATGTAAGAACTCTGGCAACTCAAATGACCAGTGTCTTATGTACTCCAAACAATAGCACCAGTTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CAA 72 bp | TGTGCGAGGTCTTTATTTGCAGCTGACTTCTTATCTTaGGTTTTACAGGGCGGGTATGTTAGTGAGATACAT | + |
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Preference number: 6 (lower is better) Translates to: CARSLFAADFLS*VLQGGYVSEIH Trigger: ATGTATCTCACTAACATACCCGCCCTGTAAAACCAAAGATAAGAAGTCAGCTGCAAATAAAGACCTCGCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS CAA 90 bp | AACTGGTGCTATTGTTTGGAGTACATAAGACACTGGTCATTTGAGTaGCCAGAGTTCTTACATTGGTTCTTTCTCATCTCTGTGTATGGG | + |
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Preference number: 6 (lower is better) Translates to: NWCYCLEYIRHWSFE*PEFLHWFFLISVYG Trigger: CCCATACACAGAGATGAGAAAGAACCAATGTAAGAACTCTGGCAACTCAAATGACCAGTGTCTTATGTACTCCAAACAATAGCACCAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS GCA 72 bp | TCTTTCCCCAGCTTGGTCTATTCTGCTGTTAATACTTaGGATTGCATTGTGAAATTCTTGCAGTGTGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: SFPSLVYSAVNT*DCIVKFLQCAF Trigger: AAAAGCACACTGCAAGAATTTCACAATGCAATCGCAAGTATTAACAGCAGAATAGACCAAGCTGGGGAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 72 bp | GTGCTATTGTTTGGAGTACATAAGACACTGGTCATTTaGGTTGCCAGAGTTCTTACATTGGTTCTTTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: VLLFGVHKTLVI*VARVLTLVLSH Trigger: ATGAGAAAGAACCAATGTAAGAACTCTGGCAACTCAAATGACCAGTGTCTTATGTACTCCAAACAATAGCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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| CDS TCA 72 bp | TGGTCTATTCTGCTGTTAATACTTGCGATTGCATTGTaGAATTCTTGCAGTGTGCTTTTCAGCTCTATCAGA | + |
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Preference number: 6 (lower is better) Translates to: WSILLLILAIAL*NSCSVLFSSIR Trigger: TCTGATAGAGCTGAAAAGCACACTGCAAGAATTTCACAATGCAATCGCAAGTATTAACAGCAGAATAGACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418839.2 |
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