Pregenerated sensors for LINC02063 (Homo sapiens)
Ensembl gene IDs: ENSG00000250921Ensembl transcript IDs: ENST00000503415.2, ENST00000666998.1
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGCCACAACACTGTCTCCAGGGCTCACACTCCCAACGTCCCAACATaGCCCTGGCGGGTTTCTCCGAGGGGGATGTGGGCAACATCTGGC | + |
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Preference number: 5 (lower is better) Translates to: CHNTVSRAHTPNVPT*PWRVSPRGMWATSG Trigger: GCCAGATGTTGCCCACATCCCCCTCGGAGAAACCCGCCAGGGGCATGTTGGGACGTTGGGAGTGTGAGCCCTGGAGACAGTGTTGTGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000503415.2 ENST00000666998.1 |
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| CDS CCA 90 bp | AACACTGTCTCCAGGGCTCACACTCCCAACGTCCCAACATGCCCCTaGCGGGTTTCTCCGAGGGGGATGTGGGCAACATCTGGCTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: NTVSRAHTPNVPTCP*RVSPRGMWATSGFP Trigger: AGGAAAGCCAGATGTTGCCCACATCCCCCTCGGAGAAACCCGCCAGGGGCATGTTGGGACGTTGGGAGTGTGAGCCCTGGAGACAGTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000503415.2 ENST00000666998.1 |
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| CDS TCA 90 bp | AGAACGGTCCATCACAACTCTGGTCTGCGGACGCCTCCCTTGCCCTaGCACCCACGTAAGTTATTAAGTGCTTCCCTGCCTGCCAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: RTVHHNSGLRTPPLP*HPRKLLSASLPARV Trigger: AACCCTGGCAGGCAGGGAAGCACTTAATAACTTACGTGGGTGTCAGGGCAAGGGAGGCGTCCGCAGACCAGAGTTGTGATGGACCGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503415.2 ENST00000666998.1 |
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| CDS TCA 90 bp | CATGAATGGGAAGAGGTGCCCAGAAGAGACCAAGCCCCTGGTCTTTaGGTCACCGGCATTTCCTGTCGTACCTCGCAGTGGGCAGGTATT | + |
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Preference number: 5 (lower is better) Translates to: HEWEEVPRRDQAPGL*VTGISCRTSQWAGI Trigger: AATACCTGCCCACTGCGAGGTACGACAGGAAATGCCGGTGACTCAAAGACCAGGGGCTTGGTCTCTTCTGGGCACCTCTTCCCATTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503415.2 ENST00000666998.1 |
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| CDS GCA 90 bp | ATTAAGTGCTTCCCTGCCTGCCAGGGTTGCAGGCGTAATTTTCACTaGGTTTCTGACTATCCTTTTCCAGATGCCGGTCGGAAGGCGCCG | + |
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Preference number: 5 (lower is better) Translates to: IKCFPACQGCRRNFH*VSDYPFPDAGRKAP Trigger: CGGCGCCTTCCGACCGGCATCTGGAAAAGGATAGTCAGAAACGCAGTGAAAATTACGCCTGCAACCCTGGCAGGCAGGGAAGCACTTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503415.2 ENST00000666998.1 |
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| CDS GCA 90 bp | GGGGGATGTGGGCAACATCTGGCTTTCCTCACTGTGGTATTGTGTTaGAATCTCCTGCAGGGGTCATCTGGAGAGATGAGCTGGTTTATG | + |
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Preference number: 5 (lower is better) Translates to: GGCGQHLAFLTVVLC*NLLQGSSGEMSWFM Trigger: CATAAACCAGCTCATCTCTCCAGATGACCCCTGCAGGAGATTGCAACACAATACCACAGTGAGGAAAGCCAGATGTTGCCCACATCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666998.1 |
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| CDS TCA 90 bp | AGAAAGTCTGAGACACACTCTGGTCTCCTTCCCGCTCTCTCAGCATaGAGCAGATCAAAACTCAGCTCCTTGTGGGATGCGAGTGTGTTA | + |
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Preference number: 5 (lower is better) Translates to: RKSETHSGLLPALSA*SRSKLSSLWDASVL Trigger: TAACACACTCGCATCCCACAAGGAGCTGAGTTTTGATCTGCTTCATGCTGAGAGAGCGGGAAGGAGACCAGAGTGTGTCTCAGACTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503415.2 ENST00000666998.1 |
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| CDS TCA 90 bp | TTCTGCAGGTCTGGAGCCACATGGACAGTTGTCACTGGGACTGTTTaGGTTCATGGTTTGCACTGCTTGAGCCAAGCAGGCACTACATAT | + |
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Preference number: 5 (lower is better) Translates to: FCRSGATWTVVTGTV*VHGLHCLSQAGTTY Trigger: ATATGTAGTGCCTGCTTGGCTCAAGCAGTGCAAACCATGAACTCAAACAGTCCCAGTGACAACTGTCCATGTGGCTCCAGACCTGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666998.1 |
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| CDS CCA 90 bp | GGACAAAATGTCAGTGGCTTCTCCCAGCTTCACAGGGTCTGTGGGTaGTGTGTAAAGTCCACCGTTACAAGTAAATGCCAGGTCATGAAG | + |
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Preference number: 5 (lower is better) Translates to: GQNVSGFSQLHRVCG*CVKSTVTSKCQVMK Trigger: CTTCATGACCTGGCATTTACTTGTAACGGTGGACTTTACACACCACCCACAGACCCTGTGAAGCTGGGAGAAGCCACTGACATTTTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503415.2 ENST00000666998.1 |
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| CDS TCA 90 bp | AAATGCCAGGTCATGAAGAGTGAGGCTGGACGTAAACTCTGGTTGTaGCTTTTTCAGAGCTTCCACGTTCTTTCTGCAGGTCTGGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: KCQVMKSEAGRKLWL*LFQSFHVLSAGLEP Trigger: TGGCTCCAGACCTGCAGAAAGAACGTGGAAGCTCTGAAAAAGTCACAACCAGAGTTTACGTCCAGCCTCACTCTTCATGACCTGGCATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666998.1 |
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| CDS CCA 90 bp | TCTGGTTGTGACTTTTTCAGAGCTTCCACGTTCTTTCTGCAGGTCTaGAGCCACATGGACAGTTGTCACTGGGACTGTTTGAGTTCATGG | + |
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Preference number: 5 (lower is better) Translates to: SGCDFFRASTFFLQV*SHMDSCHWDCLSSW Trigger: CCATGAACTCAAACAGTCCCAGTGACAACTGTCCATGTGGCTCCAGACCTGCAGAAAGAACGTGGAAGCTCTGAAAAAGTCACAACCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666998.1 |
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| CDS GCA 90 bp | CGCTCTCTCAGCATGAAGCAGATCAAAACTCAGCTCCTTGTGGGATaGGAGTGTGTTAACATTGGTTCAATTTTACAAATCTTTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: RSLSMKQIKTQLLVG*ECVNIGSILQIFLL Trigger: AAGGAGAAAGATTTGTAAAATTGAACCAATGTTAACACACTCGCATCCCACAAGGAGCTGAGTTTTGATCTGCTTCATGCTGAGAGAGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503415.2 ENST00000666998.1 |
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| CDS GCA 72 bp | ACTGTCTCCAGGGCTCACACTCCCAACGTCCCAACATaGCCCTGGCGGGTTTCTCCGAGGGGGATGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: TVSRAHTPNVPT*PWRVSPRGMWA Trigger: TGCCCACATCCCCCTCGGAGAAACCCGCCAGGGGCATGTTGGGACGTTGGGAGTGTGAGCCCTGGAGACAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000503415.2 ENST00000666998.1 |
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| CDS CCA 72 bp | TCCAGGGCTCACACTCCCAACGTCCCAACATGCCCCTaGCGGGTTTCTCCGAGGGGGATGTGGGCAACATCT | + |
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Preference number: 6 (lower is better) Translates to: SRAHTPNVPTCP*RVSPRGMWATS Trigger: AGATGTTGCCCACATCCCCCTCGGAGAAACCCGCCAGGGGCATGTTGGGACGTTGGGAGTGTGAGCCCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000503415.2 ENST00000666998.1 |
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| CDS CCA 72 bp | GAACATCACATGGTGGAGAACGGTCCATCACAACTCTaGTCTGCGGACGCCTCCCTTGCCCTGACACCCACG | + |
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Preference number: 6 (lower is better) Translates to: EHHMVENGPSQL*SADASLALTPT Trigger: CGTGGGTGTCAGGGCAAGGGAGGCGTCCGCAGACCAGAGTTGTGATGGACCGTTCTCCACCATGTGATGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503415.2 ENST00000666998.1 |
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| CDS TCA 72 bp | GAAGAGGTGCCCAGAAGAGACCAAGCCCCTGGTCTTTaGGTCACCGGCATTTCCTGTCGTACCTCGCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: EEVPRRDQAPGL*VTGISCRTSQW Trigger: CCACTGCGAGGTACGACAGGAAATGCCGGTGACTCAAAGACCAGGGGCTTGGTCTCTTCTGGGCACCTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503415.2 ENST00000666998.1 |
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| CDS GCA 72 bp | TCACATGGTGGAGAACGGTCCATCACAACTCTGGTCTaGGGACGCCTCCCTTGCCCTGACACCCACGTAAGT | + |
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Preference number: 6 (lower is better) Translates to: SHGGERSITTLV*GRLPCPDTHVS Trigger: ACTTACGTGGGTGTCAGGGCAAGGGAGGCGTCCGCAGACCAGAGTTGTGATGGACCGTTCTCCACCATGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503415.2 ENST00000666998.1 |
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| CDS CAA 72 bp | GGAAGAGGTGCCCAGAAGAGACCAAGCCCCTGGTCTTaGAGTCACCGGCATTTCCTGTCGTACCTCGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: GRGAQKRPSPWS*SHRHFLSYLAV Trigger: CACTGCGAGGTACGACAGGAAATGCCGGTGACTCAAAGACCAGGGGCTTGGTCTCTTCTGGGCACCTCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503415.2 ENST00000666998.1 |
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| CDS CAA 90 bp | CTCCGAGGGGGATGTGGGCAACATCTGGCTTTCCTCACTGTGGTATaGTGTTGCAATCTCCTGCAGGGGTCATCTGGAGAGATGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LRGGCGQHLAFLTVV*CCNLLQGSSGEMSW Trigger: CCAGCTCATCTCTCCAGATGACCCCTGCAGGAGATTGCAACACAATACCACAGTGAGGAAAGCCAGATGTTGCCCACATCCCCCTCGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666998.1 |
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| CDS TCA 72 bp | CATCACAACTCTGGTCTGCGGACGCCTCCCTTGCCCTaGCACCCACGTAAGTTATTAAGTGCTTCCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: HHNSGLRTPPLP*HPRKLLSASLP Trigger: AGGCAGGGAAGCACTTAATAACTTACGTGGGTGTCAGGGCAAGGGAGGCGTCCGCAGACCAGAGTTGTGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503415.2 ENST00000666998.1 |
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| CDS CCA 72 bp | CTGGCGGGTTTCTCCGAGGGGGATGTGGGCAACATCTaGCTTTCCTCACTGTGGTATTGTGTTGCAATCTCC | + |
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Preference number: 6 (lower is better) Translates to: LAGFSEGDVGNI*LSSLWYCVAIS Trigger: GGAGATTGCAACACAATACCACAGTGAGGAAAGCCAGATGTTGCCCACATCCCCCTCGGAGAAACCCGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666998.1 |
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| CDS TCA 72 bp | GAGACACACTCTGGTCTCCTTCCCGCTCTCTCAGCATaGAGCAGATCAAAACTCAGCTCCTTGTGGGATGCG | + |
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Preference number: 6 (lower is better) Translates to: ETHSGLLPALSA*SRSKLSSLWDA Trigger: CGCATCCCACAAGGAGCTGAGTTTTGATCTGCTTCATGCTGAGAGAGCGGGAAGGAGACCAGAGTGTGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503415.2 ENST00000666998.1 |
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| CDS GCA 72 bp | TTCCCTGCCTGCCAGGGTTGCAGGCGTAATTTTCACTaGGTTTCTGACTATCCTTTTCCAGATGCCGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: FPACQGCRRNFH*VSDYPFPDAGR Trigger: CCGACCGGCATCTGGAAAAGGATAGTCAGAAACGCAGTGAAAATTACGCCTGCAACCCTGGCAGGCAGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503415.2 ENST00000666998.1 |
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| CDS TCA 72 bp | TCTGGAGCCACATGGACAGTTGTCACTGGGACTGTTTaGGTTCATGGTTTGCACTGCTTGAGCCAAGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SGATWTVVTGTV*VHGLHCLSQAG Trigger: GCCTGCTTGGCTCAAGCAGTGCAAACCATGAACTCAAACAGTCCCAGTGACAACTGTCCATGTGGCTCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666998.1 |
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| CDS GCA 72 bp | GGGCAACATCTGGCTTTCCTCACTGTGGTATTGTGTTaGAATCTCCTGCAGGGGTCATCTGGAGAGATGAGC | + |
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Preference number: 6 (lower is better) Translates to: GQHLAFLTVVLC*NLLQGSSGEMS Trigger: GCTCATCTCTCCAGATGACCCCTGCAGGAGATTGCAACACAATACCACAGTGAGGAAAGCCAGATGTTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666998.1 |
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| CDS CCA 72 bp | GTCAGTGGCTTCTCCCAGCTTCACAGGGTCTGTGGGTaGTGTGTAAAGTCCACCGTTACAAGTAAATGCCAG | + |
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Preference number: 6 (lower is better) Translates to: VSGFSQLHRVCG*CVKSTVTSKCQ Trigger: CTGGCATTTACTTGTAACGGTGGACTTTACACACCACCCACAGACCCTGTGAAGCTGGGAGAAGCCACTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503415.2 ENST00000666998.1 |
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| CDS CAA 90 bp | AGGGGGATGTGGGCAACATCTGGCTTTCCTCACTGTGGTATTGTGTaGCAATCTCCTGCAGGGGTCATCTGGAGAGATGAGCTGGTTTAT | + |
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Preference number: 6 (lower is better) Translates to: RGMWATSGFPHCGIV*QSPAGVIWRDELVY Trigger: ATAAACCAGCTCATCTCTCCAGATGACCCCTGCAGGAGATTGCAACACAATACCACAGTGAGGAAAGCCAGATGTTGCCCACATCCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666998.1 |
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| CDS CAA 72 bp | TGGGCAACATCTGGCTTTCCTCACTGTGGTATTGTGTaGCAATCTCCTGCAGGGGTCATCTGGAGAGATGAG | + |
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Preference number: 6 (lower is better) Translates to: WATSGFPHCGIV*QSPAGVIWRDE Trigger: CTCATCTCTCCAGATGACCCCTGCAGGAGATTGCAACACAATACCACAGTGAGGAAAGCCAGATGTTGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666998.1 |
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| CDS GCA 72 bp | TGTGGGTGGTGTGTAAAGTCCACCGTTACAAGTAAATaGCAGGTCATGAAGAGTGAGGCTGGACGTAAACTC | + |
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Preference number: 6 (lower is better) Translates to: CGWCVKSTVTSK*QVMKSEAGRKL Trigger: GAGTTTACGTCCAGCCTCACTCTTCATGACCTGGCATTTACTTGTAACGGTGGACTTTACACACCACCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503415.2 ENST00000666998.1 |
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| CDS TCA 72 bp | CCATCAAAAAGAAAGTGCCTTCCAATTAAGTCCACCTaGCTGACCGAGTCTGCAACACATTTTCGGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: PSKRKCLPIKST*LTESATHFRQE Trigger: CTCCTGCCGAAAATGTGTTGCAGACTCGGTCAGTCAGGTGGACTTAATTGGAAGGCACTTTCTTTTTGATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000503415.2 ENST00000666998.1 |
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| CDS TCA 72 bp | CTCGGATGCAGAAGTAATTGCGTCTATGCATCGAGATaGCACGGTCCTCATGAAGTAATTCCTCAACTTTTC | + |
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Preference number: 6 (lower is better) Translates to: LGCRSNCVYASR*HGPHEVIPQLF Trigger: GAAAAGTTGAGGAATTACTTCATGAGGACCGTGTCATCTCGATGCATAGACGCAATTACTTCTGCATCCGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666998.1 |
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| CDS TCA 72 bp | ATGTTTGCAACTCAGCTGAAAGTTGGTTTTAATCGTTaGCTGTCGTTGATTCTACGTTTAGCCCTTCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: MFATQLKVGFNR*LSLILRLALPV Trigger: GACAGGAAGGGCTAAACGTAGAATCAACGACAGTCAACGATTAAAACCAACTTTCAGCTGAGTTGCAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666998.1 |
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| CDS GCA 72 bp | AGCATGAAGCAGATCAAAACTCAGCTCCTTGTGGGATaGGAGTGTGTTAACATTGGTTCAATTTTACAAATC | + |
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Preference number: 6 (lower is better) Translates to: SMKQIKTQLLVG*ECVNIGSILQI Trigger: GATTTGTAAAATTGAACCAATGTTAACACACTCGCATCCCACAAGGAGCTGAGTTTTGATCTGCTTCATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503415.2 ENST00000666998.1 |
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| CDS TCA 72 bp | ACCAAGTGGAGGATTTCATGTGTGGAATACTCATGCTaGAGAAAACTAATAAGGAATGTTTGCAACTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: TKWRISCVEYSC*RKLIRNVCNSA Trigger: AGCTGAGTTGCAAACATTCCTTATTAGTTTTCTTCAGCATGAGTATTCCACACATGAAATCCTCCACTTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666998.1 |
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