RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02060 (Homo sapiens)

Ensembl gene IDs: ENSG00000250156

Ensembl transcript IDs: ENST00000506041.2, ENST00000606189.1

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp AGGGATCCAAAACCAAGCAGTCTGGAAGCCATTACACAGAGAGTTTaGCCTGTGCTTGGCTTCCCGGAACTGGGGACTCTTGCTAGAAAA +
Preference number: 5 (lower is better)
Translates to: RDPKPSSLEAITQRV*PVLGFPELGTLARK
Trigger: TTTTCTAGCAAGAGTCCCCAGTTCCGGGAAGCCAAGCACAGGGCAAACTCTCTGTGTAATGGCTTCCAGACTGCTTGGTTTTGGATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506041.2
CDS GCA 90 bp TGGAATCAACTCTCGCTGCTCAGCTGTGACTTCCTGTTCCTGAGATaGTCAGCTCAATTAACTTCTCATCCCTCCCCGGCTCCTAATTTT +
Preference number: 5 (lower is better)
Translates to: WNQLSLLSCDFLFLR*SAQLTSHPSPAPNF
Trigger: AAAATTAGGAGCCGGGGAGGGATGAGAAGTTAATTGAGCTGAGCATCTCAGGAACAGGAAGTCACAGCTGAGCAGCGAGAGTTGATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506041.2
CDS CCA 90 bp CTGCTTCTATCACTTTTTCAAGTTTCTTGGCCTAGTTCTAGAGGCTaGGAAGTCCAAATCAAAGCACCAGGAGATTTCATGTCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: LLLSLFQVSWPSSRG*EVQIKAPGDFMSAE
Trigger: CTCAGCAGACATGAAATCTCCTGGTGCTTTGATTTGGACTTCCCAGCCTCTAGAACTAGGCCAAGAAACTTGAAAAAGTGATAGAAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506041.2
CDS CCA 90 bp TTTGGTATTGAGATGAAGATTTCTGTCCAGGCTGATTTCTTTTCTTaGTGGAATCAACTCTCGCTGCTCAGCTGTGACTTCCTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: FGIEMKISVQADFFS*WNQLSLLSCDFLFL
Trigger: CAGGAACAGGAAGTCACAGCTGAGCAGCGAGAGTTGATTCCACCAAGAAAAGAAATCAGCCTGGACAGAAATCTTCATCTCAATACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506041.2
CDS TCA 90 bp CAAGAACATGACTGGAAAAATACTTCAATCCTCAGCCCACTTGGATaGAGCCAAAGAATCCACTGTCTATCTTTTCTATTCCAGCTGTAC +
Preference number: 5 (lower is better)
Translates to: QEHDWKNTSILSPLG*SQRIHCLSFLFQLY
Trigger: GTACAGCTGGAATAGAAAAGATAGACAGTGGATTCTTTGGCTTCATCCAAGTGGGCTGAGGATTGAAGTATTTTTCCAGTCATGTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506041.2
ENST00000606189.1
CDS TCA 90 bp TGTGAAGAGTATGTTAATGTGCTAAAAGGCAGTCTGAAGACTTTATaGACTATGCTTACTTTTGGAAGGTACTGTAGCAATGAGAGTGGT +
Preference number: 5 (lower is better)
Translates to: CEEYVNVLKGSLKTL*TMLTFGRYCSNESG
Trigger: ACCACTCTCATTGCTACAGTACCTTCCAAAAGTAAGCATAGTTCATAAAGTCTTCAGACTGCCTTTTAGCACATTAACATACTCTTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606189.1
CDS GCA 72 bp GCAGTCTGGAAGCCATTACACAGAGAGTTTGCCCTGTaGTTGGCTTCCCGGAACTGGGGACTCTTGCTAGAA +
Preference number: 6 (lower is better)
Translates to: AVWKPLHREFAL*LASRNWGLLLE
Trigger: TTCTAGCAAGAGTCCCCAGTTCCGGGAAGCCAAGCACAGGGCAAACTCTCTGTGTAATGGCTTCCAGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506041.2
CDS GCA 72 bp AAACCAAGCAGTCTGGAAGCCATTACACAGAGAGTTTaGCCTGTGCTTGGCTTCCCGGAACTGGGGACTCTT +
Preference number: 6 (lower is better)
Translates to: KPSSLEAITQRV*PVLGFPELGTL
Trigger: AAGAGTCCCCAGTTCCGGGAAGCCAAGCACAGGGCAAACTCTCTGTGTAATGGCTTCCAGACTGCTTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506041.2
CDS CAA 72 bp AAAACCAAGCAGTCTGGAAGCCATTACACAGAGAGTTaGCCCTGTGCTTGGCTTCCCGGAACTGGGGACTCT +
Preference number: 6 (lower is better)
Translates to: KTKQSGSHYTES*PCAWLPGTGDS
Trigger: AGAGTCCCCAGTTCCGGGAAGCCAAGCACAGGGCAAACTCTCTGTGTAATGGCTTCCAGACTGCTTGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506041.2
CDS CCA 72 bp CACAGAGAGTTTGCCCTGTGCTTGGCTTCCCGGAACTaGGGACTCTTGCTAGAAAAACTCAAAAGGGCCTTT +
Preference number: 6 (lower is better)
Translates to: HREFALCLASRN*GLLLEKLKRAF
Trigger: AAAGGCCCTTTTGAGTTTTTCTAGCAAGAGTCCCCAGTTCCGGGAAGCCAAGCACAGGGCAAACTCTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506041.2
CDS CAA 72 bp GTCTGGAAGCCATTACACAGAGAGTTTGCCCTGTGCTaGGCTTCCCGGAACTGGGGACTCTTGCTAGAAAAA +
Preference number: 6 (lower is better)
Translates to: VWKPLHREFALC*ASRNWGLLLEK
Trigger: TTTTTCTAGCAAGAGTCCCCAGTTCCGGGAAGCCAAGCACAGGGCAAACTCTCTGTGTAATGGCTTCCAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506041.2
CDS TCA 72 bp ACTGTTCTGCTAGTTCTCAATGGTAACAACCCCAGGTaGTTCCTCACCAGTACCCAAGCATGCTCAATGGAA +
Preference number: 6 (lower is better)
Translates to: TVLLVLNGNNPR*FLTSTQACSME
Trigger: TTCCATTGAGCATGCTTGGGTACTGGTGAGGAATCACCTGGGGTTGTTACCATTGAGAACTAGCAGAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506041.2
CDS TCA 72 bp CTTTTCTTGGTGGAATCAACTCTCGCTGCTCAGCTGTaGCTTCCTGTTCCTGAGATGCTCAGCTCAATTAAC +
Preference number: 6 (lower is better)
Translates to: LFLVESTLAAQL*LPVPEMLSSIN
Trigger: GTTAATTGAGCTGAGCATCTCAGGAACAGGAAGTCACAGCTGAGCAGCGAGAGTTGATTCCACCAAGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506041.2
CDS CAA 90 bp GTGTTCAAGAACATGACTGGAAAAATACTTCAATCCTCAGCCCACTaGGATGAAGCCAAAGAATCCACTGTCTATCTTTTCTATTCCAGC +
Preference number: 6 (lower is better)
Translates to: VFKNMTGKILQSSAH*DEAKESTVYLFYSS
Trigger: GCTGGAATAGAAAAGATAGACAGTGGATTCTTTGGCTTCATCCAAGTGGGCTGAGGATTGAAGTATTTTTCCAGTCATGTTCTTGAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506041.2
ENST00000606189.1
CDS TCA 72 bp GACTGGAAAAATACTTCAATCCTCAGCCCACTTGGATaGAGCCAAAGAATCCACTGTCTATCTTTTCTATTC +
Preference number: 6 (lower is better)
Translates to: DWKNTSILSPLG*SQRIHCLSFLF
Trigger: GAATAGAAAAGATAGACAGTGGATTCTTTGGCTTCATCCAAGTGGGCTGAGGATTGAAGTATTTTTCCAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506041.2
ENST00000606189.1
CDS CAA 72 bp AACATGACTGGAAAAATACTTCAATCCTCAGCCCACTaGGATGAAGCCAAAGAATCCACTGTCTATCTTTTC +
Preference number: 6 (lower is better)
Translates to: NMTGKILQSSAH*DEAKESTVYLF
Trigger: GAAAAGATAGACAGTGGATTCTTTGGCTTCATCCAAGTGGGCTGAGGATTGAAGTATTTTTCCAGTCATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506041.2
ENST00000606189.1
CDS TCA 72 bp TATGTTAATGTGCTAAAAGGCAGTCTGAAGACTTTATaGACTATGCTTACTTTTGGAAGGTACTGTAGCAAT +
Preference number: 6 (lower is better)
Translates to: YVNVLKGSLKTL*TMLTFGRYCSN
Trigger: ATTGCTACAGTACCTTCCAAAAGTAAGCATAGTTCATAAAGTCTTCAGACTGCCTTTTAGCACATTAACATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606189.1