Pregenerated sensors for LINC02058 (Homo sapiens)
Ensembl gene IDs: ENSG00000248528Ensembl transcript IDs: ENST00000507491.1
Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTCACAATGGACAAATCCAACCCCAGTCTGGAAGGCAGGAGACCATaGATACAGTTCCCAGGGAGTCTCCAGAGCAGAGAGCAGGATGCA | + |
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Preference number: 5 (lower is better) Translates to: LTMDKSNPSLEGRRP*IQFPGSLQSREQDA Trigger: TGCATCCTGCTCTCTGCTCTGGAGACTCCCTGGGAACTGTATCCATGGTCTCCTGCCTTCCAGACTGGGGTTGGATTTGTCCATTGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507491.1 |
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| CDS GCA 90 bp | TGGAGATGCAATGGAAATCCTCTGTGTCTAACTGCATTTATAAGCTaGATATCCTTCCAAACTCCATCTTCTCCACAGTCCAGACCTCCT | + |
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Preference number: 5 (lower is better) Translates to: WRCNGNPLCLTAFIS*ISFQTPSSPQSRPP Trigger: AGGAGGTCTGGACTGTGGAGAAGATGGAGTTTGGAAGGATATGCAGCTTATAAATGCAGTTAGACACAGAGGATTTCCATTGCATCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507491.1 |
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| CDS GCA 90 bp | GCCACCAACAAACTGGAGATGCAATGGAAATCCTCTGTGTCTAACTaGATTTATAAGCTGCATATCCTTCCAAACTCCATCTTCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: ATNKLEMQWKSSVSN*IYKLHILPNSIFST Trigger: TGTGGAGAAGATGGAGTTTGGAAGGATATGCAGCTTATAAATGCAGTTAGACACAGAGGATTTCCATTGCATCTCCAGTTTGTTGGTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507491.1 |
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| CDS GCA 90 bp | AAAAGAGACCAGCAAAGGAGGAACCAGCCACCAACAAACTGGAGATaGAATGGAAATCCTCTGTGTCTAACTGCATTTATAAGCTGCATA | + |
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Preference number: 5 (lower is better) Translates to: KRDQQRRNQPPTNWR*NGNPLCLTAFISCI Trigger: TATGCAGCTTATAAATGCAGTTAGACACAGAGGATTTCCATTGCATCTCCAGTTTGTTGGTGGCTGGTTCCTCCTTTGCTGGTCTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507491.1 |
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| CDS CCA 72 bp | GACAAATCCAACCCCAGTCTGGAAGGCAGGAGACCATaGATACAGTTCCCAGGGAGTCTCCAGAGCAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: DKSNPSLEGRRP*IQFPGSLQSRE Trigger: CTCTCTGCTCTGGAGACTCCCTGGGAACTGTATCCATGGTCTCCTGCCTTCCAGACTGGGGTTGGATTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507491.1 |
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| CDS GCA 72 bp | CAGCAAAGGAGGAACCAGCCACCAACAAACTGGAGATaGAATGGAAATCCTCTGTGTCTAACTGCATTTATA | + |
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Preference number: 6 (lower is better) Translates to: QQRRNQPPTNWR*NGNPLCLTAFI Trigger: TATAAATGCAGTTAGACACAGAGGATTTCCATTGCATCTCCAGTTTGTTGGTGGCTGGTTCCTCCTTTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507491.1 |
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| CDS CCA 72 bp | AAGGAGGAACCAGCCACCAACAAACTGGAGATGCAATaGAAATCCTCTGTGTCTAACTGCATTTATAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: KEEPATNKLEMQ*KSSVSNCIYKL Trigger: CAGCTTATAAATGCAGTTAGACACAGAGGATTTCCATTGCATCTCCAGTTTGTTGGTGGCTGGTTCCTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507491.1 |
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| CDS GCA 72 bp | AATGGAAATCCTCTGTGTCTAACTGCATTTATAAGCTaGATATCCTTCCAAACTCCATCTTCTCCACAGTCC | + |
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Preference number: 6 (lower is better) Translates to: NGNPLCLTAFIS*ISFQTPSSPQS Trigger: GGACTGTGGAGAAGATGGAGTTTGGAAGGATATGCAGCTTATAAATGCAGTTAGACACAGAGGATTTCCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507491.1 |
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| CDS GCA 72 bp | AAACTGGAGATGCAATGGAAATCCTCTGTGTCTAACTaGATTTATAAGCTGCATATCCTTCCAAACTCCATC | + |
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Preference number: 6 (lower is better) Translates to: KLEMQWKSSVSN*IYKLHILPNSI Trigger: GATGGAGTTTGGAAGGATATGCAGCTTATAAATGCAGTTAGACACAGAGGATTTCCATTGCATCTCCAGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507491.1 |
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