Pregenerated sensors for LINC02054 (Homo sapiens)
Ensembl gene IDs: ENSG00000224153Ensembl transcript IDs: ENST00000419960.1, ENST00000478780.1, ENST00000626552.1, ENST00000629872.1, ENST00000643190.1, ENST00000645656.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCAACTGACTCAGCTGGTCCCTGCAAGAGGGGGAGGATGTGGCACTaGCCAGCTCCCAAGATGGGCTGCGTTTGGTCTCCAGGGAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: ATDSAGPCKRGRMWH*PAPKMGCVWSPGRS Trigger: GGACCTCCCTGGAGACCAAACGCAGCCCATCTTGGGAGCTGGCCAGTGCCACATCCTCCCCCTCTTGCAGGGACCAGCTGAGTCAGTTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000419960.1 ENST00000478780.1 ENST00000626552.1 ENST00000629872.1 ENST00000643190.1 ENST00000645656.1 |
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| CDS TCA 90 bp | CCAGTGCCACACAGGAAGGTGTTGAGAGGTGCGAGATGGAGCAACTaGCTCAGCTGGTCCCTGCAAGAGGGGGAGGATGTGGCACTGGCC | + |
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Preference number: 5 (lower is better) Translates to: PVPHRKVLRGARWSN*LSWSLQEGEDVALA Trigger: GGCCAGTGCCACATCCTCCCCCTCTTGCAGGGACCAGCTGAGTCAGTTGCTCCATCTCGCACCTCTCAACACCTTCCTGTGTGGCACTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000419960.1 ENST00000478780.1 ENST00000626552.1 ENST00000629872.1 ENST00000643190.1 ENST00000645656.1 |
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| CDS TCA 90 bp | ATGCCAGGGCTTCCACAGGTGGTCCAGTGCCACACAGGAAGGTGTTaGGAGGTGCGAGATGGAGCAACTGACTCAGCTGGTCCCTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: MPGLPQVVQCHTGRC*EVRDGATDSAGPCK Trigger: CTTGCAGGGACCAGCTGAGTCAGTTGCTCCATCTCGCACCTCTCAACACCTTCCTGTGTGGCACTGGACCACCTGTGGAAGCCCTGGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000419960.1 ENST00000629872.1 ENST00000643190.1 ENST00000645656.1 |
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| CDS GCA 90 bp | GGGCTCAGTTCAGCCAAGACTGTGACTGCAGAAGAACGGGGATCCTaGGCTGGGATCCCAGCCATGCCCTCGCCTTGGTGTTTTCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: GLSSAKTVTAEERGS*AGIPAMPSPWCFLS Trigger: ACTGAGAAAACACCAAGGCGAGGGCATGGCTGGGATCCCAGCGCAGGATCCCCGTTCTTCTGCAGTCACAGTCTTGGCTGAACTGAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000419960.1 ENST00000629872.1 ENST00000643190.1 ENST00000645656.1 |
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| CDS CCA 90 bp | ACTTCTGCGAGCTATGGTAGCAAGGCATGCCAGGGCTTCCACAGGTaGTCCAGTGCCACACAGGAAGGTGTTGAGAGGTGCGAGATGGAG | + |
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Preference number: 5 (lower is better) Translates to: TSASYGSKACQGFHR*SSATQEGVERCEME Trigger: CTCCATCTCGCACCTCTCAACACCTTCCTGTGTGGCACTGGACCACCTGTGGAAGCCCTGGCATGCCTTGCTACCATAGCTCGCAGAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000419960.1 ENST00000629872.1 ENST00000643190.1 ENST00000645656.1 |
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| CDS CCA 90 bp | CAGTTCAGCCAAGACTGTGACTGCAGAAGAACGGGGATCCTGCGCTaGGATCCCAGCCATGCCCTCGCCTTGGTGTTTTCTCAGTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: QFSQDCDCRRTGILR*DPSHALALVFSQSV Trigger: CACAGACTGAGAAAACACCAAGGCGAGGGCATGGCTGGGATCCCAGCGCAGGATCCCCGTTCTTCTGCAGTCACAGTCTTGGCTGAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000419960.1 ENST00000629872.1 ENST00000643190.1 ENST00000645656.1 |
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| CDS GCA 90 bp | GGCCTCCTTTTCTCCATAACTTCTGCGAGCTATGGTAGCAAGGCATaGCAGGGCTTCCACAGGTGGTCCAGTGCCACACAGGAAGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: GLLFSITSASYGSKA*QGFHRWSSATQEGV Trigger: AACACCTTCCTGTGTGGCACTGGACCACCTGTGGAAGCCCTGGCATGCCTTGCTACCATAGCTCGCAGAAGTTATGGAGAAAAGGAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000419960.1 ENST00000629872.1 ENST00000643190.1 ENST00000645656.1 |
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| CDS TCA 90 bp | CGGAGAGAGCCTCCTGGAACCCAACGAGCAAATAGGACAAGCATGTaGAAACGGAGTTGGACTACTGTCCCGACAGGGGAAAGGTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: RREPPGTQRANRTSM*KRSWTTVPTGERFW Trigger: CCAGAACCTTTCCCCTGTCGGGACAGTAGTCCAACTCCGTTTTCACATGCTTGTCCTATTTGCTCGTTGGGTTCCAGGAGGCTCTCTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419960.1 ENST00000629872.1 |
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| CDS CCA 90 bp | TCTCCAGGGAGGTCCAGTCTGGTGGGCATTTCCAACATAAGCGGTTaGGCAAGAAGCCAGGGTCCATCCACAATGGAATGTCCACCAAAC | + |
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Preference number: 5 (lower is better) Translates to: SPGRSSLVGISNISG*ARSQGPSTMECPPN Trigger: GTTTGGTGGACATTCCATTGTGGATGGACCCTGGCTTCTTGCCCAACCGCTTATGTTGGAAATGCCCACCAGACTGGACCTCCCTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000419960.1 ENST00000478780.1 ENST00000626552.1 ENST00000629872.1 ENST00000643190.1 ENST00000645656.1 |
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| CDS CCA 90 bp | AAGGGAGGAGCCCAGGATGATGCCCTAGTTTCTGACTTGAGCATCTaGCTGGCTGTTCACCTGGTCCCAGAAGAGACCTACACACATGCT | + |
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Preference number: 5 (lower is better) Translates to: KGGAQDDALVSDLSI*LAVHLVPEETYTHA Trigger: AGCATGTGTGTAGGTCTCTTCTGGGACCAGGTGAACAGCCAGCCAGATGCTCAAGTCAGAAACTAGGGCATCATCCTGGGCTCCTCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645656.1 |
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| CDS CCA 90 bp | CAGCAAGAATGTTTCCTCTCTCGGGTGGGAAAGGAGGGAAGAGGCTaGCTCCAGAAGATTCCCTTTGACAGGCTGCCAAAGGTAGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: QQECFLSRVGKEGRG*LQKIPFDRLPKVER Trigger: CCTTTCTACCTTTGGCAGCCTGTCAAAGGGAATCTTCTGGAGCCAGCCTCTTCCCTCCTTTCCCACCCGAGAGAGGAAACATTCTTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478780.1 |
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| CDS CCA 90 bp | ATGAGGCTCTGCCCTTATGACTGGATTAATCCATTTGTGGATGAATaGATTCATGGGTTATCATGGGAGTGGGGCTGGTGGCCTTATAAG | + |
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Preference number: 5 (lower is better) Translates to: MRLCPYDWINPFVDE*IHGLSWEWGWWPYK Trigger: CTTATAAGGCCACCAGCCCCACTCCCATGATAACCCATGAATCCATTCATCCACAAATGGATTAATCCAGTCATAAGGGCAGAGCCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643190.1 ENST00000645656.1 |
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| CDS CCA 90 bp | GGGCCTTTAAGAAGTGACTGGGTCATGAGGCTCTGCCCTTATGACTaGATTAATCCATTTGTGGATGAATGGATTCATGGGTTATCATGG | + |
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Preference number: 5 (lower is better) Translates to: GPLRSDWVMRLCPYD*INPFVDEWIHGLSW Trigger: CCATGATAACCCATGAATCCATTCATCCACAAATGGATTAATCCAGTCATAAGGGCAGAGCCTCATGACCCAGTCACTTCTTAAAGGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643190.1 ENST00000645656.1 |
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| CDS GCA 72 bp | ATCTCAGGGCGCAGGGACCAAGTGGCAGCACTCCACTaGCACAGGCGAGGTGAACATGGTTACGGTGATGGA | + |
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Preference number: 6 (lower is better) Translates to: ISGRRDQVAALH*HRRGEHGYGDG Trigger: TCCATCACCGTAACCATGTTCACCTCGCCTGTGGCAGTGGAGTGCTGCCACTTGGTCCCTGCGCCCTGAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643190.1 ENST00000645656.1 |
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| CDS GCA 72 bp | GCTAGCACACTCAGCCCCTCACCATGTGATGCCCTGTaGCACCTCAGGACTCTGCAAAGAGTCCCCACCAAC | + |
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Preference number: 6 (lower is better) Translates to: ASTLSPSPCDAL*HLRTLQRVPTN Trigger: GTTGGTGGGGACTCTTTGCAGAGTCCTGAGGTGGCACAGGGCATCACATGGTGAGGGGCTGAGTGTGCTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000643190.1 ENST00000645656.1 |
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| CDS CCA 72 bp | AATGGGAGTCATGGATCTCAGGGCGCAGGGACCAAGTaGCAGCACTCCACTGCCACAGGCGAGGTGAACATG | + |
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Preference number: 6 (lower is better) Translates to: NGSHGSQGAGTK*QHSTATGEVNM Trigger: CATGTTCACCTCGCCTGTGGCAGTGGAGTGCTGCCACTTGGTCCCTGCGCCCTGAGATCCATGACTCCCATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643190.1 ENST00000645656.1 |
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| CDS CAA 72 bp | GGGATCCTGCGCTGGGATCCCAGCCATGCCCTCGCCTaGGTGTTTTCTCAGTCTGTGTGGGCCTCCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: GILRWDPSHALA*VFSQSVWASFS Trigger: AGAAAAGGAGGCCCACACAGACTGAGAAAACACCAAGGCGAGGGCATGGCTGGGATCCCAGCGCAGGATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000419960.1 ENST00000629872.1 ENST00000643190.1 ENST00000645656.1 |
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| CDS TCA 72 bp | CACAGGAAGGTGTTGAGAGGTGCGAGATGGAGCAACTaGCTCAGCTGGTCCCTGCAAGAGGGGGAGGATGTG | + |
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Preference number: 6 (lower is better) Translates to: HRKVLRGARWSN*LSWSLQEGEDV Trigger: CACATCCTCCCCCTCTTGCAGGGACCAGCTGAGTCAGTTGCTCCATCTCGCACCTCTCAACACCTTCCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000419960.1 ENST00000478780.1 ENST00000626552.1 ENST00000629872.1 ENST00000643190.1 ENST00000645656.1 |
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| CDS GCA 72 bp | CCTCACCATGTGATGCCCTGTGCCACCTCAGGACTCTaGAAAGAGTCCCCACCAACAAGAAGGCTCTCGCCA | + |
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Preference number: 6 (lower is better) Translates to: PHHVMPCATSGL*KESPPTRRLSP Trigger: TGGCGAGAGCCTTCTTGTTGGTGGGGACTCTTTGCAGAGTCCTGAGGTGGCACAGGGCATCACATGGTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643190.1 ENST00000645656.1 |
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| CDS TCA 72 bp | GCCCTATTCATTGTGGAAAGGTGTGACACAAGGGCATaGGCACCAGGAGGTGAGGATCACTGGGGCCAGACC | + |
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Preference number: 6 (lower is better) Translates to: ALFIVERCDTRA*APGGEDHWGQT Trigger: GGTCTGGCCCCAGTGATCCTCACCTCCTGGTGCTCATGCCCTTGTGTCACACCTTTCCACAATGAATAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645656.1 |
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| CDS GCA 72 bp | TTCTCCATAACTTCTGCGAGCTATGGTAGCAAGGCATaGCAGGGCTTCCACAGGTGGTCCAGTGCCACACAG | + |
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Preference number: 6 (lower is better) Translates to: FSITSASYGSKA*QGFHRWSSATQ Trigger: CTGTGTGGCACTGGACCACCTGTGGAAGCCCTGGCATGCCTTGCTACCATAGCTCGCAGAAGTTATGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000419960.1 ENST00000629872.1 ENST00000643190.1 ENST00000645656.1 |
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| CDS CCA 72 bp | CGGAGTTGGACTACTGTCCCGACAGGGGAAAGGTTCTaGAAGCTGGAGGCTGTGAATCAGCAGAGCAATGGA | + |
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Preference number: 6 (lower is better) Translates to: RSWTTVPTGERF*KLEAVNQQSNG Trigger: TCCATTGCTCTGCTGATTCACAGCCTCCAGCTTCCAGAACCTTTCCCCTGTCGGGACAGTAGTCCAACTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419960.1 ENST00000629872.1 |
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| CDS CCA 72 bp | TGTTTCCTCTCTCGGGTGGGAAAGGAGGGAAGAGGCTaGCTCCAGAAGATTCCCTTTGACAGGCTGCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: CFLSRVGKEGRG*LQKIPFDRLPK Trigger: CTTTGGCAGCCTGTCAAAGGGAATCTTCTGGAGCCAGCCTCTTCCCTCCTTTCCCACCCGAGAGAGGAAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478780.1 |
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| CDS CCA 72 bp | GCCCAGGATGATGCCCTAGTTTCTGACTTGAGCATCTaGCTGGCTGTTCACCTGGTCCCAGAAGAGACCTAC | + |
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Preference number: 6 (lower is better) Translates to: AQDDALVSDLSI*LAVHLVPEETY Trigger: GTAGGTCTCTTCTGGGACCAGGTGAACAGCCAGCCAGATGCTCAAGTCAGAAACTAGGGCATCATCCTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643190.1 ENST00000645656.1 |
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| CDS CAA 72 bp | AAGGGAGGAGCCCAGGATGATGCCCTAGTTTCTGACTaGAGCATCTGGCTGGCTGTTCACCTGGTCCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: KGGAQDDALVSD*SIWLAVHLVPE Trigger: TTCTGGGACCAGGTGAACAGCCAGCCAGATGCTCAAGTCAGAAACTAGGGCATCATCCTGGGCTCCTCCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645656.1 |
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| CDS CAA 90 bp | GTCTCCAGGGAGGTCCAGTCTGGTGGGCATTTCCAACATAAGCGGTaGGGCAAGAAGCCAGGGTCCATCCACAATGGAATGTCCACCAAA | + |
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Preference number: 6 (lower is better) Translates to: VSREVQSGGHFQHKR*GKKPGSIHNGMSTK Trigger: TTTGGTGGACATTCCATTGTGGATGGACCCTGGCTTCTTGCCCAACCGCTTATGTTGGAAATGCCCACCAGACTGGACCTCCCTGGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000419960.1 ENST00000478780.1 ENST00000626552.1 ENST00000629872.1 ENST00000643190.1 ENST00000645656.1 |
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| CDS TCA 72 bp | CATGGTTACGGTGATGGACAGCAGAGTCACAGCAGCTaGATTGCCAACTCCTGCAGACCAATGGCACAGGCT | + |
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Preference number: 6 (lower is better) Translates to: HGYGDGQQSHSS*IANSCRPMAQA Trigger: AGCCTGTGCCATTGGTCTGCAGGAGTTGGCAATTCAGCTGCTGTGACTCTGCTGTCCATCACCGTAACCATG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643190.1 ENST00000645656.1 |
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| CDS CCA 72 bp | AGCCTCATTCCCAGCAAGAATGTTTCCTCTCTCGGGTaGGAAAGGAGGGAAGAGGCTGGCTCCAGAAGATTC | + |
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Preference number: 6 (lower is better) Translates to: SLIPSKNVSSLG*ERREEAGSRRF Trigger: GAATCTTCTGGAGCCAGCCTCTTCCCTCCTTTCCCACCCGAGAGAGGAAACATTCTTGCTGGGAATGAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478780.1 |
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| CDS CAA 72 bp | GAGGTCCAGTCTGGTGGGCATTTCCAACATAAGCGGTaGGGCAAGAAGCCAGGGTCCATCCACAATGGAATG | + |
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Preference number: 6 (lower is better) Translates to: EVQSGGHFQHKR*GKKPGSIHNGM Trigger: CATTCCATTGTGGATGGACCCTGGCTTCTTGCCCAACCGCTTATGTTGGAAATGCCCACCAGACTGGACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000419960.1 ENST00000478780.1 ENST00000626552.1 ENST00000629872.1 ENST00000643190.1 ENST00000645656.1 |
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| CDS CAA 90 bp | GTGAACATGGTTACGGTGATGGACAGCAGAGTCACAGCAGCTGAATaGCCAACTCCTGCAGACCAATGGCACAGGCTGTTAAGCATGGCG | + |
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Preference number: 6 (lower is better) Translates to: VNMVTVMDSRVTAAE*PTPADQWHRLLSMA Trigger: CGCCATGCTTAACAGCCTGTGCCATTGGTCTGCAGGAGTTGGCAATTCAGCTGCTGTGACTCTGCTGTCCATCACCGTAACCATGTTCAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643190.1 ENST00000645656.1 |
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| CDS CCA 72 bp | AGGTCCAGTCTGGTGGGCATTTCCAACATAAGCGGTTaGGCAAGAAGCCAGGGTCCATCCACAATGGAATGT | + |
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Preference number: 6 (lower is better) Translates to: RSSLVGISNISG*ARSQGPSTMEC Trigger: ACATTCCATTGTGGATGGACCCTGGCTTCTTGCCCAACCGCTTATGTTGGAAATGCCCACCAGACTGGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000419960.1 ENST00000478780.1 ENST00000626552.1 ENST00000629872.1 ENST00000643190.1 ENST00000645656.1 |
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| CDS CAA 72 bp | GTTACGGTGATGGACAGCAGAGTCACAGCAGCTGAATaGCCAACTCCTGCAGACCAATGGCACAGGCTGTTA | + |
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Preference number: 6 (lower is better) Translates to: VTVMDSRVTAAE*PTPADQWHRLL Trigger: TAACAGCCTGTGCCATTGGTCTGCAGGAGTTGGCAATTCAGCTGCTGTGACTCTGCTGTCCATCACCGTAAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643190.1 ENST00000645656.1 |
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| CDS TCA 72 bp | AGGGTCCATCCACAATGGAATGTCCACCAAACATCCTaGTGCGCAGCAAACACTGTAATCCCAGCTACTCGG | + |
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Preference number: 6 (lower is better) Translates to: RVHPQWNVHQTS*CAANTVIPATR Trigger: CCGAGTAGCTGGGATTACAGTGTTTGCTGCGCATCAGGATGTTTGGTGGACATTCCATTGTGGATGGACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643190.1 ENST00000645656.1 |
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| CDS CAA 72 bp | CCCACCAACAAGAAGGCTCTCGCCAGATCCGGCTCCTaGATCTTGGACTTCTCAGTCTTCATAAAGCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: PTNKKALARSGS*ILDFSVFIKQS Trigger: TGACTGCTTTATGAAGACTGAGAAGTCCAAGATCAAGGAGCCGGATCTGGCGAGAGCCTTCTTGTTGGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643190.1 ENST00000645656.1 |
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| CDS CAA 90 bp | GTCCCCACCAACAAGAAGGCTCTCGCCAGATCCGGCTCCTTGATCTaGGACTTCTCAGTCTTCATAAAGCAGTCACTGAATTTGGAAACT | + |
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Preference number: 6 (lower is better) Translates to: VPTNKKALARSGSLI*DFSVFIKQSLNLET Trigger: AGTTTCCAAATTCAGTGACTGCTTTATGAAGACTGAGAAGTCCAAGATCAAGGAGCCGGATCTGGCGAGAGCCTTCTTGTTGGTGGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643190.1 ENST00000645656.1 |
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| CDS CAA 90 bp | CAAAGAGTCCCCACCAACAAGAAGGCTCTCGCCAGATCCGGCTCCTaGATCTTGGACTTCTCAGTCTTCATAAAGCAGTCACTGAATTTG | + |
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Preference number: 6 (lower is better) Translates to: QRVPTNKKALARSGS*ILDFSVFIKQSLNL Trigger: CAAATTCAGTGACTGCTTTATGAAGACTGAGAAGTCCAAGATCAAGGAGCCGGATCTGGCGAGAGCCTTCTTGTTGGTGGGGACTCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643190.1 ENST00000645656.1 |
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| CDS TCA 72 bp | AGGGTCCATCCACAATGGAATGTCCACCAAACATCCTaGTGCGCAGCAAACACTTTGCTTAAACCCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: RVHPQWNVHQTS*CAANTLLKPIC Trigger: GCAGATGGGTTTAAGCAAAGTGTTTGCTGCGCATCAGGATGTTTGGTGGACATTCCATTGTGGATGGACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478780.1 |
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| CDS CAA 90 bp | CATTTCCCTCTTTCTCCATTCACTCAGTCAGTCAACAAACACAGGTaGAACATCTATACCATGCTAGGCCCTCTAGTCCCAGCTACTCAG | + |
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Preference number: 6 (lower is better) Translates to: HFPLSPFTQSVNKHR*NIYTMLGPLVPATQ Trigger: CTGAGTAGCTGGGACTAGAGGGCCTAGCATGGTATAGATGTTCAACCTGTGTTTGTTGACTGACTGAGTGAATGGAGAAAGAGGGAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645656.1 |
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| CDS CCA 72 bp | TGCCCTTATGACTGGATTAATCCATTTGTGGATGAATaGATTCATGGGTTATCATGGGAGTGGGGCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: CPYDWINPFVDE*IHGLSWEWGWW Trigger: CCACCAGCCCCACTCCCATGATAACCCATGAATCCATTCATCCACAAATGGATTAATCCAGTCATAAGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643190.1 ENST00000645656.1 |
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| CDS CCA 72 bp | AATCCATTTGTGGATGAATGGATTCATGGGTTATCATaGGAGTGGGGCTGGTGGCCTTATAAGAAGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: NPFVDEWIHGLS*EWGWWPYKKRK Trigger: CTTCCTCTTCTTATAAGGCCACCAGCCCCACTCCCATGATAACCCATGAATCCATTCATCCACAAATGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643190.1 ENST00000645656.1 |
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| CDS CCA 72 bp | AGAAGTGACTGGGTCATGAGGCTCTGCCCTTATGACTaGATTAATCCATTTGTGGATGAATGGATTCATGGG | + |
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Preference number: 6 (lower is better) Translates to: RSDWVMRLCPYD*INPFVDEWIHG Trigger: CCCATGAATCCATTCATCCACAAATGGATTAATCCAGTCATAAGGGCAGAGCCTCATGACCCAGTCACTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643190.1 ENST00000645656.1 |
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| CDS GCA 72 bp | ACCCATCTGCTTCTTTCCATACAAGTCCATGTCAGATaGAGGCAGTCAAAGAATTGTCTCAGAGTTCATATC | + |
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Preference number: 6 (lower is better) Translates to: THLLLSIQVHVR*RQSKNCLRVHI Trigger: GATATGAACTCTGAGACAATTCTTTGACTGCCTGCATCTGACATGGACTTGTATGGAAAGAAGCAGATGGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000478780.1 ENST00000645656.1 |
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| CDS CCA 72 bp | TTGATCTGCCTTCATTTATGTCTTGTTAATTTCCAATaGATATTAAGCCTTCATTTGCCATTTTTGGCATCC | + |
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Preference number: 6 (lower is better) Translates to: LICLHLCLVNFQ*ILSLHLPFLAS Trigger: GGATGCCAAAAATGGCAAATGAAGGCTTAATATCCATTGGAAATTAACAAGACATAAATGAAGGCAGATCAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645656.1 |
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