Pregenerated sensors for LINC02052 (Homo sapiens)
Ensembl gene IDs: ENSG00000224406Ensembl transcript IDs: ENST00000427474.2, ENST00000427914.5, ENST00000441169.2, ENST00000458099.2, ENST00000653537.1, ENST00000654350.1, ENST00000662825.1, ENST00000664389.1, ENST00000664567.1, ENST00000664591.1, ENST00000666408.1, ENST00000666843.1, ENST00000667213.1, ENST00000669782.1, ENST00000671324.1
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCAAGGACATCTGCAGTGCACGGCAGCATCAGGGGGCAGGCCTCCTaGGCCCCCAGCAGGATTCCATTTCTCCACCTTCCACTGCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SRTSAVHGSIRGQAS*APSRIPFLHLPLPS Trigger: GGATGGCAGTGGAAGGTGGAGAAATGGAATCCTGCTGGGGGCTCAGGAGGCCTGCCCCCTGATGCTGCCGTGCACTGCAGATGTCCTTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 11 transcripts: ENST00000427474.2 ENST00000427914.5 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS CCA 90 bp | CTCGCCAAGCTGACAGACGACTGCATCCCCAGCCAACATCTAGACTaGAGCCTCACGAGAGACCAACCCGGAGACCCCACCCAGCTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LAKLTDDCIPSQHLD*SLTRDQPGDPTQLS Trigger: GCTTAGCTGGGTGGGGTCTCCGGGTTGGTCTCTCGTGAGGCTCCAGTCTAGATGTTGGCTGGGGATGCAGTCGTCTGTCAGCTTGGCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664567.1 |
||
| CDS GCA 90 bp | GCTCCCTTCCAATACCTTCCATTCATTCTCTTCATCAAGGACATCTaGAGTGCACGGCAGCATCAGGGGGCAGGCCTCCTGAGCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: APFQYLPFILFIKDI*SARQHQGAGLLSPQ Trigger: CTGGGGGCTCAGGAGGCCTGCCCCCTGATGCTGCCGTGCACTGCAGATGTCCTTGATGAAGAGAATGAATGGAAGGTATTGGAAGGGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000427914.5 |
||
| CDS TCA 90 bp | CCAGCAGGATTCCATTTCTCCACCTTCCACTGCCATCCGACTTGCTaGTGCCCAGGCCCCCAGAGGAGGAAGGGCTATCCTGTTGTTATG | + |
|
Preference number: 5 (lower is better) Translates to: PAGFHFSTFHCHPTC*CPGPQRRKGYPVVM Trigger: CATAACAACAGGATAGCCCTTCCTCCTCTGGGGGCCTGGGCATCAGCAAGTCGGATGGCAGTGGAAGGTGGAGAAATGGAATCCTGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000427914.5 ENST00000664591.1 ENST00000666408.1 |
||
| CDS GCA 90 bp | AAAGGCTTTCTGGCACTTCCATTCATTCTCTTCATCAAGGACATCTaGAGTGCACGGCAGCATCAGGGGGCAGGCCTCCTGAGCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KGFLALPFILFIKDI*SARQHQGAGLLSPQ Trigger: CTGGGGGCTCAGGAGGCCTGCCCCCTGATGCTGCCGTGCACTGCAGATGTCCTTGATGAAGAGAATGAATGGAAGTGCCAGAAAGCCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000427474.2 ENST00000662825.1 ENST00000666408.1 ENST00000669782.1 |
||
| CDS GCA 90 bp | CACAGGGCAGCCCCTTCTGTTGCTTGGCCAGTCTGTTACCAGTCCTaGTCACACCGAGCTGGTTTTGGCCTCTCTGTAATTTCCATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HRAAPSVAWPVCYQS*SHRAGFGLSVISIP Trigger: AGGGATGGAAATTACAGAGAGGCCAAAACCAGCTCGGTGTGAGCAGGACTGGTAACAGACTGGCCAAGCAACAGAAGGGGCTGCCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000427474.2 ENST00000427914.5 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS GCA 90 bp | CCCATTGACAGAGAGCTTGCTTCTTCACAGGGCAGCCCCTTCTGTTaGTTGGCCAGTCTGTTACCAGTCCTGCTCACACCGAGCTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PIDRELASSQGSPFC*LASLLPVLLTPSWF Trigger: AAACCAGCTCGGTGTGAGCAGGACTGGTAACAGACTGGCCAAGCAACAGAAGGGGCTGCCCTGTGAAGAAGCAAGCTCTCTGTCAATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000427474.2 ENST00000427914.5 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS TCA 90 bp | CCAGCAGGATTCCATTTCTCCACCTTCCACTGCCATCCGACTTGCTaGTGCCCAGGCCCCCAGAGGAGGAAGGGCTATCTTATCAATAGA | + |
|
Preference number: 5 (lower is better) Translates to: PAGFHFSTFHCHPTC*CPGPQRRKGYLINR Trigger: TCTATTGATAAGATAGCCCTTCCTCCTCTGGGGGCCTGGGCATCAGCAAGTCGGATGGCAGTGGAAGGTGGAGAAATGGAATCCTGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS GCA 90 bp | TGTCTTGCTCTCTCTTTCGGATCACGTGCTCTTCAGGGAGCCAGCTaGCATGTCATGCAGACACTCAAGCAGCCCTATGGAGAAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: CLALSFGSRALQGAS*HVMQTLKQPYGEAT Trigger: TGTGGCTTCTCCATAGGGCTGCTTGAGTGTCTGCATGACATGGCAGCTGGCTCCCTGAAGAGCACGTGATCCGAAAGAGAGAGCAAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664567.1 |
||
| CDS GCA 90 bp | TGTCTTGCTCTCTCTTTCGGATCACGTGCTCTTCAGGGAGCCAGCTaGCATGTCATGCAGACACTCAAGCAGCCCGGGCTCTTAATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CLALSFGSRALQGAS*HVMQTLKQPGLLIF Trigger: AAAGATTAAGAGCCCGGGCTGCTTGAGTGTCTGCATGACATGGCAGCTGGCTCCCTGAAGAGCACGTGATCCGAAAGAGAGAGCAAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000653537.1 ENST00000662825.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS CCA 90 bp | AACCATCTGGAGAAGAGCCAGGCAAAGGCCTTGATATCGGTGTTCTaGGCGCTGGGATTGATCATGCAGAGACCAGTGCAGCACCTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: NHLEKSQAKALISVF*ALGLIMQRPVQHLN Trigger: GTTTAGGTGCTGCACTGGTCTCTGCATGATCAATCCCAGCGCCCAGAACACCGATATCAAGGCCTTTGCCTGGCTCTTCTCCAGATGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654350.1 ENST00000664389.1 ENST00000667213.1 ENST00000671324.1 |
||
| CDS TCA 90 bp | GTGTGCTCTTGTGCTGGCTTTGAAGCTTTCATCTTCACTCCTGACTaGCTGATTGGGGCTCCATTGGTGAGCCCGACTCCTGATCCAATC | + |
|
Preference number: 5 (lower is better) Translates to: VCSCAGFEAFIFTPD*LIGAPLVSPTPDPI Trigger: GATTGGATCAGGAGTCGGGCTCACCAATGGAGCCCCAATCAGTCAGTCAGGAGTGAAGATGAAAGCTTCAAAGCCAGCACAAGAGCACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427914.5 |
||
| CDS TCA 90 bp | GCTGATGCCCAGGCCCCCAGAGGAGGAAGGGCTATCCTGTTGTTATaGGAACAAATGAAGCTAAGAAGTGGTTTGAGGTGGGAACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ADAQAPRGGRAILLL*EQMKLRSGLRWEQP Trigger: TGGCTGTTCCCACCTCAAACCACTTCTTAGCTTCATTTGTTCTCATAACAACAGGATAGCCCTTCCTCCTCTGGGGGCCTGGGCATCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000427914.5 ENST00000664591.1 ENST00000666408.1 |
||
| CDS CCA 90 bp | TGCTTGGCCAGTCTGTTACCAGTCCTGCTCACACCGAGCTGGTTTTaGCCTCTCTGTAATTTCCATCCCTGGTTCAAGATGTGCCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CLASLLPVLLTPSWF*PLCNFHPWFKMCLV Trigger: CACAAGGCACATCTTGAACCAGGGATGGAAATTACAGAGAGGCCAAAACCAGCTCGGTGTGAGCAGGACTGGTAACAGACTGGCCAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000427474.2 ENST00000427914.5 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS TCA 90 bp | GCTTCTCCTCTTTTATGTGACTGCCCTTCAGACAGCTGCAATTCGTaGTTATGCCGGCCTCCTGTGTGCTCTTGTGCTGGATGTTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ASPLLCDCPSDSCNS*LCRPPVCSCAGCLE Trigger: TTCCAAACATCCAGCACAAGAGCACACAGGAGGCCGGCATAATCACGAATTGCAGCTGTCTGAAGGGCAGTCACATAAAAGAGGAGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000427474.2 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS CCA 90 bp | AAGCAACAGGTATTTCTTCTGAGGAAACTGGGTGCAGCAATGATGTaGCCACAACACCTTGTAGATGTGGGAAGATGTCCACGGTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KQQVFLLRKLGAAMM*PQHLVDVGRCPRWP Trigger: TGGCCACCGTGGACATCTTCCCACATCTACAAGGTGTTGTGGCCACATCATTGCTGCACCCAGTTTCCTCAGAAGAAATACCTGTTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427914.5 |
||
| CDS GCA 90 bp | GAGAAACCAGTGACTCAGAGAGGGGAATCCGCATGCTCTAGGTCATaGTGTGAATGTCAGAACTGGGAAGTTTCTTGCTCCGTTAACACT | + |
|
Preference number: 5 (lower is better) Translates to: EKPVTQRGESACSRS*CECQNWEVSCSVNT Trigger: AGTGTTAACGGAGCAAGAAACTTCCCAGTTCTGACATTCACAGCATGACCTAGAGCATGCGGATTCCCCTCTCTGAGTCACTGGTTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000427914.5 ENST00000458099.2 ENST00000664591.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS GCA 90 bp | TCTTTTGCAGGTGAGAAACCAGTGACTCAGAGAGGGGAATCCGCATaGTCTAGGTCATGCTGTGAATGTCAGAACTGGGAAGTTTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SFAGEKPVTQRGESA*SRSCCECQNWEVSC Trigger: GCAAGAAACTTCCCAGTTCTGACATTCACAGCATGACCTAGAGCATGCGGATTCCCCTCTCTGAGTCACTGGTTTCTCACCTGCAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000427914.5 ENST00000458099.2 ENST00000664591.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS CCA 90 bp | AGAGGGGAATCCGCATGCTCTAGGTCATGCTGTGAATGTCAGAACTaGGAAGTTTCTTGCTCCGTTAACACTGGCTTTTTGCCTGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: RGESACSRSCCECQN*EVSCSVNTGFLPAL Trigger: CAATGCAGGCAAAAAGCCAGTGTTAACGGAGCAAGAAACTTCCCAGTTCTGACATTCACAGCATGACCTAGAGCATGCGGATTCCCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000427914.5 ENST00000458099.2 ENST00000664591.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS CCA 90 bp | AGGAAGGGCTATCCTGTTGTTATGAGAACAAATGAAGCTAAGAAGTaGTTTGAGGTGGGAACAGCCAGGCCCGGGCTCTTAATCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RKGYPVVMRTNEAKK*FEVGTARPGLLIFS Trigger: GGAAAAGATTAAGAGCCCGGGCCTGGCTGTTCCCACCTCAAACCACTTCTTAGCTTCATTTGTTCTCATAACAACAGGATAGCCCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427914.5 |
||
| CDS CCA 90 bp | TATGTTTTCAGGTCACTGCCGAGACCTTTTTGCAGGCAATCCAGATaGGTCTGGACTCAAGTGAGAAGTGAGTCATCAATGCCTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: YVFRSLPRPFCRQSR*VWTQVRSESSMPLK Trigger: CTTCAAAGGCATTGATGACTCACTTCTCACTTGAGTCCAGACCCATCTGGATTGCCTGCAAAAAGGTCTCGGCAGTGACCTGAAAACATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000654350.1 ENST00000664389.1 ENST00000667213.1 ENST00000671324.1 |
||
| CDS TCA 90 bp | TTTGGCCTCTCTGTAATTTCCATCCCTGGTTCAAGATGTGCCTTGTaGAGCAAAGGTGAAGCTTCTCCTCTTTTATGTGACTGCCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FGLSVISIPGSRCAL*SKGEASPLLCDCPS Trigger: TGAAGGGCAGTCACATAAAAGAGGAGAAGCTTCACCTTTGCTTCACAAGGCACATCTTGAACCAGGGATGGAAATTACAGAGAGGCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000427474.2 ENST00000427914.5 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS TCA 90 bp | TCAAAGTTGCTTGGGTGCTTGTTGGACAAGTCTAGAACATGGGGATaGATTGCCAGACAGCAGGTCCTGGTTAGAATTGGTTGGGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: SKLLGCLLDKSRTWG*IARQQVLVRIGWVI Trigger: AATTACCCAACCAATTCTAACCAGGACCTGCTGTCTGGCAATTCATCCCCATGTTCTAGACTTGTCCAACAAGCACCCAAGCAACTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000654350.1 ENST00000664389.1 ENST00000667213.1 ENST00000671324.1 |
||
| CDS GCA 90 bp | GCATGCTCTAGGTCATGCTGTGAATGTCAGAACTGGGAAGTTTCTTaGTCCGTTAACACTGGCTTTTTGCCTGCATTGTGCTATCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: ACSRSCCECQNWEVS*SVNTGFLPALCYLI Trigger: AATGAGATAGCACAATGCAGGCAAAAAGCCAGTGTTAACGGAGCAAGAAACTTCCCAGTTCTGACATTCACAGCATGACCTAGAGCATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000427914.5 ENST00000458099.2 ENST00000664591.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS CCA 90 bp | AATAAAACAGCTGATGCTGTGAACTGTAAAGAATCTGAGCTAATTTaGTCCTCCCCTTTCTCCCATCCATTGCAGACTTCGGCCATAGCG | + |
|
Preference number: 5 (lower is better) Translates to: NKTADAVNCKESELI*SSPFSHPLQTSAIA Trigger: CGCTATGGCCGAAGTCTGCAATGGATGGGAGAAAGGGGAGGACCAAATTAGCTCAGATTCTTTACAGTTCACAGCATCAGCTGTTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427914.5 |
||
| CDS CCA 90 bp | ACAATTGTTCTCACAGCAGTAAGAATGAGGAATTTACCTGTAGGATaGACGATGCTTAAGTCAGGTGTTTGTAAACCAGGGGCTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TIVLTAVRMRNLPVG*TMLKSGVCKPGAVS Trigger: AGAGACAGCCCCTGGTTTACAAACACCTGACTTAAGCATCGTCCATCCTACAGGTAAATTCCTCATTCTTACTGCTGTGAGAACAATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427914.5 |
||
| CDS GCA 90 bp | TGGTCTCTACCTTCTGAAATAGTACATGACGCAAGAAAATGTCCATaGTTGTCACGACAAAAACTACTATTCCCTGGAAGTCTGTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: WSLPSEIVHDARKCP*LSRQKLLFPGSLWY Trigger: GTACCACAGACTTCCAGGGAATAGTAGTTTTTGTCGTGACAAGCATGGACATTTTCTTGCGTCATGTACTATTTCAGAAGGTAGAGACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427914.5 |
||
| CDS GCA 90 bp | TTTGTAAACCAGGGGCTGTCTCTGCTCATTTACTTGATACTTACATaGAGTATGTTGGTTTACTTTACGCTGATCCCCAGAGTTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: FVNQGLSLLIYLILT*SMLVYFTLIPRVSS Trigger: TGATGAAACTCTGGGGATCAGCGTAAAGTAAACCAACATACTGCATGTAAGTATCAAGTAAATGAGCAGAGACAGCCCCTGGTTTACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000427474.2 ENST00000427914.5 ENST00000441169.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000666408.1 |
||
| CDS TCA 90 bp | TTTGTAAATTCGAGCTCTTGCTCTGAGGAGGGATCCTTGACATTCTaGGAACTGTTAAATACGTATACATGCCTCGTTTCTAAACCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: FVNSSSCSEEGSLTF*ELLNTYTCLVSKPK Trigger: CTTAGGTTTAGAAACGAGGCATGTATACGTATTTAACAGTTCTCAGAATGTCAAGGATCCCTCCTCAGAGCAAGAGCTCGAATTTACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427914.5 |
||
| CDS TCA 90 bp | TTTGTAAATTCGAGCTCTTGCTCTGAGGAGGGATCCTTGACATTCTaGGAACTGTTAAATACGTATACATGCCTCGTTTCTAAACAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FVNSSSCSEEGSLTF*ELLNTYTCLVSKQE Trigger: TTCCTGTTTAGAAACGAGGCATGTATACGTATTTAACAGTTCTCAGAATGTCAAGGATCCCTCCTCAGAGCAAGAGCTCGAATTTACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664389.1 |
||
| CDS TCA 90 bp | TTTGTAAATTCGAGCTCTTGCTCTGAGGAGGGATCCTTGACATTCTaGGAACTGTTAAATACGTATACATGCCTCGTTTCTAAACCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: FVNSSSCSEEGSLTF*ELLNTYTCLVSKPE Trigger: TTCAGGTTTAGAAACGAGGCATGTATACGTATTTAACAGTTCTCAGAATGTCAAGGATCCCTCCTCAGAGCAAGAGCTCGAATTTACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671324.1 |
||
| CDS GCA 90 bp | GCTCCTAACAATTGTTCTCACAGCAGTAAGAATGAGGAATTTACATaGAGTATGTTGGTTTACTTTACGCTGATCCCCAGAGTTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: APNNCSHSSKNEEFT*SMLVYFTLIPRVSS Trigger: TGATGAAACTCTGGGGATCAGCGTAAAGTAAACCAACATACTGCATGTAAATTCCTCATTCTTACTGCTGTGAGAACAATTGTTAGGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000458099.2 ENST00000664591.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS TCA 90 bp | TTTGTAAATTCGAGCTCTTGCTCTGAGGAGGGATCCTTGACATTCTaGGAACTGTTAAATACGTATACATGCCTCGTTTCTAAACTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FVNSSSCSEEGSLTF*ELLNTYTCLVSKLS Trigger: TGAAAGTTTAGAAACGAGGCATGTATACGTATTTAACAGTTCTCAGAATGTCAAGGATCCCTCCTCAGAGCAAGAGCTCGAATTTACAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654350.1 ENST00000667213.1 |
||
| CDS TCA 90 bp | CCTTTACAATTTTGGATGGATTCTAGATGTGTGAAGCAGTGTGGCTaGATTGTTGTTGGGTGGAAATCCCACTTATTACAAAGTATACAA | + |
|
Preference number: 5 (lower is better) Translates to: PLQFWMDSRCVKQCG*IVVGWKSHLLQSIQ Trigger: TTGTATACTTTGTAATAAGTGGGATTTCCACCCAACAACAATTCAGCCACACTGCTTCACACATCTAGAATCCATCCAAAATTGTAAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000427474.2 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS CAA 90 bp | GCCCCCAGCAGGATTCCATTTCTCCACCTTCCACTGCCATCCGACTaGCTGATGCCCAGGCCCCCAGAGGAGGAAGGGCTATCCGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: APSRIPFLHLPLPSD*LMPRPPEEEGLSGL Trigger: GAGCCCGGATAGCCCTTCCTCCTCTGGGGGCCTGGGCATCAGCAAGTCGGATGGCAGTGGAAGGTGGAGAAATGGAATCCTGCTGGGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000427474.2 ENST00000441169.2 ENST00000458099.2 |
||
| CDS CCA 72 bp | AGAGGGGCTGAGGCCTGTTTCCCACAGCCATGTGAGTaGGCCATTCCGGAAGCAGATCATCCAGCCCTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: RGAEACFPQPCE*AIPEADHPALA Trigger: GGCGAGGGCTGGATGATCTGCTTCCGGAATGGCCCACTCACATGGCTGTGGGAAACAGGCCTCAGCCCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664567.1 |
||
| CDS CAA 90 bp | GCCCCCAGCAGGATTCCATTTCTCCACCTTCCACTGCCATCCGACTaGCTGATGCCCAGGCCCCCAGAGGAGGAAGGGCTATCCTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: APSRIPFLHLPLPSD*LMPRPPEEEGLSCC Trigger: ACAACAGGATAGCCCTTCCTCCTCTGGGGGCCTGGGCATCAGCAAGTCGGATGGCAGTGGAAGGTGGAGAAATGGAATCCTGCTGGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000427914.5 ENST00000664591.1 ENST00000666408.1 |
||
| CDS TCA 72 bp | TTCCATTTCTCCACCTTCCACTGCCATCCGACTTGCTaGTGCCCAGGCCCCCAGAGGAGGAAGGGCTATCCG | + |
|
Preference number: 6 (lower is better) Translates to: FHFSTFHCHPTC*CPGPQRRKGYP Trigger: CGGATAGCCCTTCCTCCTCTGGGGGCCTGGGCATCAGCAAGTCGGATGGCAGTGGAAGGTGGAGAAATGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000427474.2 ENST00000441169.2 ENST00000458099.2 |
||
| CDS GCA 72 bp | CTCTCTTTCGGATCACGTGCTCTTCAGGGAGCCAGCTaGCATGTCATGCAGACACTCAAGCAGCCCGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LSFGSRALQGAS*HVMQTLKQPGL Trigger: GAGCCCGGGCTGCTTGAGTGTCTGCATGACATGGCAGCTGGCTCCCTGAAGAGCACGTGATCCGAAAGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000653537.1 ENST00000662825.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS CCA 72 bp | TGGGGAAGGGGTCAGCTTCCATGCCTTCTCTGGGTGTaGACCCTCCCAGAACCTCCACGTGCTCAACAACCT | + |
|
Preference number: 6 (lower is better) Translates to: WGRGQLPCLLWV*TLPEPPRAQQP Trigger: AGGTTGTTGAGCACGTGGAGGTTCTGGGAGGGTCCACACCCAGAGAAGGCATGGAAGCTGACCCCTTCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000427474.2 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS CAA 90 bp | GCCCCCAGCAGGATTCCATTTCTCCACCTTCCACTGCCATCCGACTaGCTGATGCCCAGGCCCCCAGAGGAGGAAGGGCTATCTTATCAA | + |
|
Preference number: 6 (lower is better) Translates to: APSRIPFLHLPLPSD*LMPRPPEEEGLSYQ Trigger: TTGATAAGATAGCCCTTCCTCCTCTGGGGGCCTGGGCATCAGCAAGTCGGATGGCAGTGGAAGGTGGAGAAATGGAATCCTGCTGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS TCA 72 bp | TTCCATTTCTCCACCTTCCACTGCCATCCGACTTGCTaGTGCCCAGGCCCCCAGAGGAGGAAGGGCTATCCT | + |
|
Preference number: 6 (lower is better) Translates to: FHFSTFHCHPTC*CPGPQRRKGYP Trigger: AGGATAGCCCTTCCTCCTCTGGGGGCCTGGGCATCAGCAAGTCGGATGGCAGTGGAAGGTGGAGAAATGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000427914.5 ENST00000664591.1 ENST00000666408.1 |
||
| CDS GCA 72 bp | GCAAAGAGCAAGGTATGGGGAAGGGGTCAGCTTCCATaGCTTCTCTGGGTGTGGACCCTCCCAGAACCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: AKSKVWGRGQLP*LLWVWTLPEPP Trigger: TGGAGGTTCTGGGAGGGTCCACACCCAGAGAAGGCATGGAAGCTGACCCCTTCCCCATACCTTGCTCTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000427474.2 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS GCA 72 bp | TGTTCTCTGGAGCAGAGCAGGTCTACAGGGTCAGGCTaGCTGGCTAGGCCCCTCTGTGAATGCCCCTTGATT | + |
|
Preference number: 6 (lower is better) Translates to: CSLEQSRSTGSG*LARPLCECPLI Trigger: AATCAAGGGGCATTCACAGAGGGGCCTAGCCAGGCAGCCTGACCCTGTAGACCTGCTCTGCTCCAGAGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671324.1 |
||
| CDS CAA 72 bp | AGGATTCCATTTCTCCACCTTCCACTGCCATCCGACTaGCTGATGCCCAGGCCCCCAGAGGAGGAAGGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: RIPFLHLPLPSD*LMPRPPEEEGL Trigger: TAGCCCTTCCTCCTCTGGGGGCCTGGGCATCAGCAAGTCGGATGGCAGTGGAAGGTGGAGAAATGGAATCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENST00000427474.2 ENST00000427914.5 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS TCA 72 bp | TTCCATTTCTCCACCTTCCACTGCCATCCGACTTGCTaGTGCCCAGGCCCCCAGAGGAGGAAGGGCTATCTT | + |
|
Preference number: 6 (lower is better) Translates to: FHFSTFHCHPTC*CPGPQRRKGYL Trigger: AAGATAGCCCTTCCTCCTCTGGGGGCCTGGGCATCAGCAAGTCGGATGGCAGTGGAAGGTGGAGAAATGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS GCA 72 bp | CTGGCACTTCCATTCATTCTCTTCATCAAGGACATCTaGAGTGCACGGCAGCATCAGGGGGCAGGCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LALPFILFIKDI*SARQHQGAGLL Trigger: CAGGAGGCCTGCCCCCTGATGCTGCCGTGCACTGCAGATGTCCTTGATGAAGAGAATGAATGGAAGTGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000427474.2 ENST00000662825.1 ENST00000666408.1 ENST00000669782.1 |
||
| CDS CCA 72 bp | GTGGACCCTCCCAGAACCTCCACGTGCTCAACAACCTaGAAGCTCTCAGAAACCAGTCCAGTCCTTTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VDPPRTSTCSTT*KLSETSPVLLG Trigger: CCCCAAAAGGACTGGACTGGTTTCTGAGAGCTTCCAGGTTGTTGAGCACGTGGAGGTTCTGGGAGGGTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000427474.2 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS CAA 72 bp | CAGAGAGCTTGCTTCTTCACAGGGCAGCCCCTTCTGTaGCTTGGCCAGTCTGTTACCAGTCCTGCTCACACC | + |
|
Preference number: 6 (lower is better) Translates to: QRACFFTGQPLL*LGQSVTSPAHT Trigger: GGTGTGAGCAGGACTGGTAACAGACTGGCCAAGCAACAGAAGGGGCTGCCCTGTGAAGAAGCAAGCTCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000427474.2 ENST00000427914.5 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS CAA 72 bp | TGCAGGCTCAGCTTGCACCTCCCATTGACAGAGAGCTaGCTTCTTCACAGGGCAGCCCCTTCTGTTGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: CRLSLHLPLTES*LLHRAAPSVAW Trigger: CCAAGCAACAGAAGGGGCTGCCCTGTGAAGAAGCAAGCTCTCTGTCAATGGGAGGTGCAAGCTGAGCCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000427474.2 ENST00000427914.5 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS GCA 72 bp | AGACAGCTTCCATTCATTCTCTTCATCAAGGACATCTaGAGTGCACGGCAGCATCAGGGGGCAGGCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RQLPFILFIKDI*SARQHQGAGLL Trigger: CAGGAGGCCTGCCCCCTGATGCTGCCGTGCACTGCAGATGTCCTTGATGAAGAGAATGAATGGAAGCTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000664567.1 ENST00000664591.1 ENST00000666843.1 |
||
| CDS GCA 72 bp | CTCTCTTTCGGATCACGTGCTCTTCAGGGAGCCAGCTaGCATGTCATGCAGACACTCAAGCAGCCCTATGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSFGSRALQGAS*HVMQTLKQPYG Trigger: TCCATAGGGCTGCTTGAGTGTCTGCATGACATGGCAGCTGGCTCCCTGAAGAGCACGTGATCCGAAAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664567.1 |
||
| CDS CCA 72 bp | GAGAAGAGCCAGGCAAAGGCCTTGATATCGGTGTTCTaGGCGCTGGGATTGATCATGCAGAGACCAGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EKSQAKALISVF*ALGLIMQRPVQ Trigger: CTGCACTGGTCTCTGCATGATCAATCCCAGCGCCCAGAACACCGATATCAAGGCCTTTGCCTGGCTCTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654350.1 ENST00000664389.1 ENST00000667213.1 ENST00000671324.1 |
||
| CDS CAA 90 bp | ATTGACAGAGAGCTTGCTTCTTCACAGGGCAGCCCCTTCTGTTGCTaGGCCAGTCTGTTACCAGTCCTGCTCACACCGAGCTGGTTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: IDRELASSQGSPFCC*ASLLPVLLTPSWFW Trigger: CCAAAACCAGCTCGGTGTGAGCAGGACTGGTAACAGACTGGCCAAGCAACAGAAGGGGCTGCCCTGTGAAGAAGCAAGCTCTCTGTCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000427474.2 ENST00000427914.5 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS GCA 72 bp | CAATACCTTCCATTCATTCTCTTCATCAAGGACATCTaGAGTGCACGGCAGCATCAGGGGGCAGGCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QYLPFILFIKDI*SARQHQGAGLL Trigger: CAGGAGGCCTGCCCCCTGATGCTGCCGTGCACTGCAGATGTCCTTGATGAAGAGAATGAATGGAAGGTATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427914.5 |
||
| CDS CAA 72 bp | GCAAAGGCCTTGATATCGGTGTTCTGGGCGCTGGGATaGATCATGCAGAGACCAGTGCAGCACCTAAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: AKALISVFWALG*IMQRPVQHLNR Trigger: CCTGTTTAGGTGCTGCACTGGTCTCTGCATGATCAATCCCAGCGCCCAGAACACCGATATCAAGGCCTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654350.1 ENST00000664389.1 ENST00000667213.1 ENST00000671324.1 |
||
| CDS CAA 90 bp | AAGAGCCAGGCAAAGGCCTTGATATCGGTGTTCTGGGCGCTGGGATaGATCATGCAGAGACCAGTGCAGCACCTAAACAGGGACCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: KSQAKALISVFWALG*IMQRPVQHLNRDHF Trigger: GAAATGGTCCCTGTTTAGGTGCTGCACTGGTCTCTGCATGATCAATCCCAGCGCCCAGAACACCGATATCAAGGCCTTTGCCTGGCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654350.1 ENST00000664389.1 ENST00000667213.1 ENST00000671324.1 |
||
| CDS TCA 72 bp | TGTGCTGGCTTTGAAGCTTTCATCTTCACTCCTGACTaGCTGATTGGGGCTCCATTGGTGAGCCCGACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CAGFEAFIFTPD*LIGAPLVSPTP Trigger: AGGAGTCGGGCTCACCAATGGAGCCCCAATCAGTCAGTCAGGAGTGAAGATGAAAGCTTCAAAGCCAGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427914.5 |
||
| CDS TCA 72 bp | CTTTTATGTGACTGCCCTTCAGACAGCTGCAATTCGTaGTTATGCCGGCCTCCTGTGTGCTCTTGTGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLCDCPSDSCNS*LCRPPVCSCAG Trigger: GCCAGCACAAGAGCACACAGGAGGCCGGCATAATCACGAATTGCAGCTGTCTGAAGGGCAGTCACATAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427914.5 |
||
| CDS TCA 72 bp | CTTTTATGTGACTGCCCTTCAGACAGCTGCAATTCGTaGTTATGCCGGCCTCCTGTGTGCTCTTGTGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLCDCPSDSCNS*LCRPPVCSCAG Trigger: TCCAGCACAAGAGCACACAGGAGGCCGGCATAATCACGAATTGCAGCTGTCTGAAGGGCAGTCACATAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000427474.2 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS GCA 72 bp | GTGACTCAGAGAGGGGAATCCGCATGCTCTAGGTCATaGTGTGAATGTCAGAACTGGGAAGTTTCTTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VTQRGESACSRS*CECQNWEVSCS Trigger: GGAGCAAGAAACTTCCCAGTTCTGACATTCACAGCATGACCTAGAGCATGCGGATTCCCCTCTCTGAGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000427914.5 ENST00000458099.2 ENST00000664591.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS TCA 72 bp | ATCAATGCCTTTGAAGCTTTCATCTTCACTCCTGACTaGCTGATTGGGGCTCCATTGGTGAGCCCGACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: INAFEAFIFTPD*LIGAPLVSPTP Trigger: AGGAGTCGGGCTCACCAATGGAGCCCCAATCAGTCAGTCAGGAGTGAAGATGAAAGCTTCAAAGGCATTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000654350.1 ENST00000664389.1 ENST00000667213.1 ENST00000671324.1 |
||
| CDS GCA 72 bp | CAAAGATATGCTGTTGAAGACACTGCGCTTCTGTCTTaGTCTCTCTTTCGGATCACGTGCTCTTCAGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: QRYAVEDTALLS*SLFRITCSSGS Trigger: GCTCCCTGAAGAGCACGTGATCCGAAAGAGAGAGCAAGACAGAAGCGCAGTGTCTTCAACAGCATATCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS CCA 72 bp | AGTCTGTTACCAGTCCTGCTCACACCGAGCTGGTTTTaGCCTCTCTGTAATTTCCATCCCTGGTTCAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: SLLPVLLTPSWF*PLCNFHPWFKM Trigger: CATCTTGAACCAGGGATGGAAATTACAGAGAGGCCAAAACCAGCTCGGTGTGAGCAGGACTGGTAACAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000427474.2 ENST00000427914.5 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS CCA 72 bp | CTGCCGAGACCTTTTTGCAGGCAATCCAGATGGGTCTaGACTCAAGTGAGAAGTGAGTCATCAATGCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LPRPFCRQSRWV*TQVRSESSMPL Trigger: CAAAGGCATTGATGACTCACTTCTCACTTGAGTCCAGACCCATCTGGATTGCCTGCAAAAAGGTCTCGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000654350.1 ENST00000664389.1 ENST00000667213.1 ENST00000671324.1 |
||
| CDS CCA 72 bp | AGGTCACTGCCGAGACCTTTTTGCAGGCAATCCAGATaGGTCTGGACTCAAGTGAGAAGTGAGTCATCAATG | + |
|
Preference number: 6 (lower is better) Translates to: RSLPRPFCRQSR*VWTQVRSESSM Trigger: CATTGATGACTCACTTCTCACTTGAGTCCAGACCCATCTGGATTGCCTGCAAAAAGGTCTCGGCAGTGACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000654350.1 ENST00000664389.1 ENST00000667213.1 ENST00000671324.1 |
||
| CDS CAA 72 bp | GGTGCTTGTTGGACAAGTCTAGAACATGGGGATGAATaGCCAGACAGCAGGTCCTGGTTAGAATTGGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GACWTSLEHGDE*PDSRSWLELVG Trigger: CCCAACCAATTCTAACCAGGACCTGCTGTCTGGCAATTCATCCCCATGTTCTAGACTTGTCCAACAAGCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000654350.1 ENST00000664389.1 ENST00000667213.1 ENST00000671324.1 |
||
| CDS TCA 72 bp | CTTGGGTGCTTGTTGGACAAGTCTAGAACATGGGGATaGATTGCCAGACAGCAGGTCCTGGTTAGAATTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LGCLLDKSRTWG*IARQQVLVRIG Trigger: ACCAATTCTAACCAGGACCTGCTGTCTGGCAATTCATCCCCATGTTCTAGACTTGTCCAACAAGCACCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000654350.1 ENST00000664389.1 ENST00000667213.1 ENST00000671324.1 |
||
| CDS GCA 72 bp | AAAGTATACAACTCGGGAACAGCCAAATGGAAGAGATaGAAAGAGCAAGGTATGGGGAAGGGGTCAGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: KVYNSGTAKWKR*KEQGMGKGSAS Trigger: GGAAGCTGACCCCTTCCCCATACCTTGCTCTTTGCATCTCTTCCATTTGGCTGTTCCCGAGTTGTATACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000427474.2 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS CAA 72 bp | CTGCAATTCGTGATTATGCCGGCCTCCTGTGTGCTCTaGTGCTGGATGTTTGGAAGATGTTCTTGCCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LQFVIMPASCVL*CWMFGRCSCLF Trigger: AAACAGGCAAGAACATCTTCCAAACATCCAGCACAAGAGCACACAGGAGGCCGGCATAATCACGAATTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000427474.2 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS CAA 90 bp | ACAGATTTGGTTATTGTCTGCTCCATTAATTGTGCTATTCTCCCATaGCAGACCAGTAAGCCAGGGCTGAGGGGATCTAAAGCTCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: TDLVIVCSINCAILP*QTSKPGLRGSKAPP Trigger: GGGAGGAGCTTTAGATCCCCTCAGCCCTGGCTTACTGGTCTGCAATGGGAGAATAGCACAATTAATGGAGCAGACAATAACCAAATCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671324.1 |
||
| CDS GCA 72 bp | AGGTCATGCTGTGAATGTCAGAACTGGGAAGTTTCTTaGTCCGTTAACACTGGCTTTTTGCCTGCATTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RSCCECQNWEVS*SVNTGFLPALC Trigger: GCACAATGCAGGCAAAAAGCCAGTGTTAACGGAGCAAGAAACTTCCCAGTTCTGACATTCACAGCATGACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000427914.5 ENST00000458099.2 ENST00000664591.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS CCA 72 bp | GCTGATGCTGTGAACTGTAAAGAATCTGAGCTAATTTaGTCCTCCCCTTTCTCCCATCCATTGCAGACTTCG | + |
|
Preference number: 6 (lower is better) Translates to: ADAVNCKESELI*SSPFSHPLQTS Trigger: CGAAGTCTGCAATGGATGGGAGAAAGGGGAGGACCAAATTAGCTCAGATTCTTTACAGTTCACAGCATCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427914.5 |
||
| CDS CCA 72 bp | GTATTTCTTCTGAGGAAACTGGGTGCAGCAATGATGTaGCCACAACACCTTGTAGATGTGGGAAGATGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VFLLRKLGAAMM*PQHLVDVGRCP Trigger: TGGACATCTTCCCACATCTACAAGGTGTTGTGGCCACATCATTGCTGCACCCAGTTTCCTCAGAAGAAATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427914.5 |
||
| CDS CCA 72 bp | TATCCTGTTGTTATGAGAACAAATGAAGCTAAGAAGTaGTTTGAGGTGGGAACAGCCAGGCCCGGGCTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: YPVVMRTNEAKK*FEVGTARPGLL Trigger: TAAGAGCCCGGGCCTGGCTGTTCCCACCTCAAACCACTTCTTAGCTTCATTTGTTCTCATAACAACAGGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427914.5 |
||
| CDS CCA 72 bp | TTGCAGGATGGAACTCAAAGTTGCTTGGGTGCTTGTTaGACAAGTCTAGAACATGGGGATGAATTGCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LQDGTQSCLGAC*TSLEHGDELPD Trigger: GTCTGGCAATTCATCCCCATGTTCTAGACTTGTCCAACAAGCACCCAAGCAACTTTGAGTTCCATCCTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000654350.1 ENST00000664389.1 ENST00000667213.1 ENST00000671324.1 |
||
| CDS TCA 72 bp | CAGGCAATCCAGATGGGTCTGGACTCAAGTGAGAAGTaGGTCATCAATGCCTTTGAAGCTTTCATCTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: QAIQMGLDSSEK*VINAFEAFIFT Trigger: AGTGAAGATGAAAGCTTCAAAGGCATTGATGACTCACTTCTCACTTGAGTCCAGACCCATCTGGATTGCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654350.1 ENST00000664389.1 ENST00000667213.1 ENST00000671324.1 |
||
| CDS GCA 72 bp | TTTACATATGTTTTCAGGTCACTGCCGAGACCTTTTTaGAGGCAATCCAGATGGGTCTGGACTCAAGTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: FTYVFRSLPRPF*RQSRWVWTQVR Trigger: TCTCACTTGAGTCCAGACCCATCTGGATTGCCTGCAAAAAGGTCTCGGCAGTGACCTGAAAACATATGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000654350.1 ENST00000664389.1 ENST00000667213.1 ENST00000671324.1 |
||
| CDS CAA 72 bp | ATTTACATATGTTTTCAGGTCACTGCCGAGACCTTTTaGCAGGCAATCCAGATGGGTCTGGACTCAAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: IYICFQVTAETF*QAIQMGLDSSE Trigger: CTCACTTGAGTCCAGACCCATCTGGATTGCCTGCAAAAAGGTCTCGGCAGTGACCTGAAAACATATGTAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000654350.1 ENST00000664389.1 ENST00000667213.1 ENST00000671324.1 |
||
| CDS CAA 72 bp | GTTATTGTCTGCTCCATTAATTGTGCTATTCTCCCATaGCAGACCAGTAAGCCAGGGCTGAGGGGATCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: VIVCSINCAILP*QTSKPGLRGSK Trigger: TTTAGATCCCCTCAGCCCTGGCTTACTGGTCTGCAATGGGAGAATAGCACAATTAATGGAGCAGACAATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671324.1 |
||
| CDS TCA 72 bp | TCGAGCTCTTGCTCTGAGGAGGGATCCTTGACATTCTaGGAACTGTTAAATACGTATACATGCCTCGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSCSEEGSLTF*ELLNTYTCLVS Trigger: AGAAACGAGGCATGTATACGTATTTAACAGTTCTCAGAATGTCAAGGATCCCTCCTCAGAGCAAGAGCTCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000427914.5 ENST00000654350.1 ENST00000664389.1 ENST00000667213.1 ENST00000671324.1 |
||
| CDS GCA 72 bp | CAGGGGCTGTCTCTGCTCATTTACTTGATACTTACATaGAGTATGTTGGTTTACTTTACGCTGATCCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: QGLSLLIYLILT*SMLVYFTLIPR Trigger: TCTGGGGATCAGCGTAAAGTAAACCAACATACTGCATGTAAGTATCAAGTAAATGAGCAGAGACAGCCCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000427474.2 ENST00000427914.5 ENST00000441169.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000666408.1 |
||
| CDS CCA 72 bp | ACTTATTACAAAGTATACAACTCGGGAACAGCCAAATaGAAGAGATGCAAAGAGCAAGGTATGGGGAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TYYKVYNSGTAK*KRCKEQGMGKG Trigger: CCCCTTCCCCATACCTTGCTCTTTGCATCTCTTCCATTTGGCTGTTCCCGAGTTGTATACTTTGTAATAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000427474.2 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS TCA 72 bp | TCTGTAATTTCCATCCCTGGTTCAAGATGTGCCTTGTaGAGCAAAGGTGAAGCTTCTCCTCTTTTATGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SVISIPGSRCAL*SKGEASPLLCD Trigger: GTCACATAAAAGAGGAGAAGCTTCACCTTTGCTTCACAAGGCACATCTTGAACCAGGGATGGAAATTACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000427474.2 ENST00000427914.5 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS GCA 72 bp | AATTGGTTGGGTAATTTACATATGTTTTCAGGTCACTaGCGAGACCTTTTTGCAGGCAATCCAGATGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: NWLGNLHMFSGH*RDLFAGNPDGS Trigger: AGACCCATCTGGATTGCCTGCAAAAAGGTCTCGGCAGTGACCTGAAAACATATGTAAATTACCCAACCAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000654350.1 ENST00000664389.1 ENST00000667213.1 ENST00000671324.1 |
||
| CDS CAA 72 bp | TATTCAAATGTGTCTCCACATAGTAGGAGTAAGGTCTaGGGAGTAAACAGAGTGGAAATTTTCGGCAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: YSNVSPHSRSKV*GVNRVEIFGST Trigger: CGTGCTGCCGAAAATTTCCACTCTGTTTACTCCCAAGACCTTACTCCTACTATGTGGAGACACATTTGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000427474.2 ENST00000427914.5 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS CAA 90 bp | TTAAGTCAGGTGTTTGTAAACCAGGGGCTGTCTCTGCTCATTTACTaGATACTTACATGCAGTATGTTGGTTTACTTTACGCTGATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LSQVFVNQGLSLLIY*ILTCSMLVYFTLIP Trigger: GGGGATCAGCGTAAAGTAAACCAACATACTGCATGTAAGTATCAAGTAAATGAGCAGAGACAGCCCCTGGTTTACAAACACCTGACTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000427474.2 ENST00000427914.5 ENST00000441169.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000666408.1 |
||
| CDS CAA 72 bp | ACAACCTGGAAGCTCTCAGAAACCAGTCCAGTCCTTTaGGGGTTTTATGGAGGCTTATTGTTTACATCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: TTWKLSETSPVL*GFYGGLLFTSL Trigger: TAAAGATGTAAACAATAAGCCTCCATAAAACCCCAAAAGGACTGGACTGGTTTCTGAGAGCTTCCAGGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000427474.2 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS CAA 72 bp | AGCAATCCACTGCTGACTTTTTCATTAGGTGGTCATTaGTTGAACTTCAGCTCCCTTCCAATACCTTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: SNPLLTFSLGGH*LNFSSLPIPSI Trigger: AATGGAAGGTATTGGAAGGGAGCTGAAGTTCAACAAATGACCACCTAATGAAAAAGTCAGCAGTGGATTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427914.5 |
||
| CDS CAA 90 bp | CAGGGGCTGTCTCTGCTCATTTACTTGATACTTACATGCAGTATGTaGGTTTACTTTACGCTGATCCCCAGAGTTTCATCATTTAAACTA | + |
|
Preference number: 6 (lower is better) Translates to: QGLSLLIYLILTCSM*VYFTLIPRVSSFKL Trigger: TAGTTTAAATGATGAAACTCTGGGGATCAGCGTAAAGTAAACCAACATACTGCATGTAAGTATCAAGTAAATGAGCAGAGACAGCCCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000427474.2 ENST00000427914.5 ENST00000441169.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000666408.1 |
||
| CDS CAA 90 bp | CTTGTCACGACAAAAACTACTATTCCCTGGAAGTCTGTGGTACTTTaGAACTCTCTTAAAACTTTACCCTCCTTGAAGAAGGTTTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LVTTKTTIPWKSVVL*NSLKTLPSLKKVSG Trigger: TCCTGAAACCTTCTTCAAGGAGGGTAAAGTTTTAAGAGAGTTCAAAAGTACCACAGACTTCCAGGGAATAGTAGTTTTTGTCGTGACAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427914.5 |
||
| CDS CAA 90 bp | TCTCTACCTTCTGAAATAGTACATGACGCAAGAAAATGTCCATGCTaGTCACGACAAAAACTACTATTCCCTGGAAGTCTGTGGTACTTT | + |
|
Preference number: 6 (lower is better) Translates to: SLPSEIVHDARKCPC*SRQKLLFPGSLWYF Trigger: AAAGTACCACAGACTTCCAGGGAATAGTAGTTTTTGTCGTGACAAGCATGGACATTTTCTTGCGTCATGTACTATTTCAGAAGGTAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427914.5 |
||
| CDS TCA 72 bp | TTTTGGATGGATTCTAGATGTGTGAAGCAGTGTGGCTaGATTGTTGTTGGGTGGAAATCCCACTTATTACAA | + |
|
Preference number: 6 (lower is better) Translates to: FWMDSRCVKQCG*IVVGWKSHLLQ Trigger: TTGTAATAAGTGGGATTTCCACCCAACAACAATTCAGCCACACTGCTTCACACATCTAGAATCCATCCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000427474.2 ENST00000441169.2 ENST00000458099.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000664591.1 ENST00000666408.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS GCA 72 bp | CCTTCTGAAATAGTACATGACGCAAGAAAATGTCCATaGTTGTCACGACAAAAACTACTATTCCCTGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: PSEIVHDARKCP*LSRQKLLFPGS Trigger: ACTTCCAGGGAATAGTAGTTTTTGTCGTGACAAGCATGGACATTTTCTTGCGTCATGTACTATTTCAGAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427914.5 |
||
| CDS CAA 72 bp | GTGTTTGTAAACCAGGGGCTGTCTCTGCTCATTTACTaGATACTTACATGCAGTATGTTGGTTTACTTTACG | + |
|
Preference number: 6 (lower is better) Translates to: VFVNQGLSLLIY*ILTCSMLVYFT Trigger: CGTAAAGTAAACCAACATACTGCATGTAAGTATCAAGTAAATGAGCAGAGACAGCCCCTGGTTTACAAACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000427474.2 ENST00000427914.5 ENST00000441169.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000666408.1 |
||
| CDS CAA 72 bp | TCTGAAATAGTACATGACGCAAGAAAATGTCCATGCTaGTCACGACAAAAACTACTATTCCCTGGAAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SEIVHDARKCPC*SRQKLLFPGSL Trigger: CAGACTTCCAGGGAATAGTAGTTTTTGTCGTGACAAGCATGGACATTTTCTTGCGTCATGTACTATTTCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427914.5 |
||
| CDS CAA 72 bp | CACAGCAGTAAGAATGAGGAATTTACATGCAGTATGTaGGTTTACTTTACGCTGATCCCCAGAGTTTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: HSSKNEEFTCSM*VYFTLIPRVSS Trigger: TGATGAAACTCTGGGGATCAGCGTAAAGTAAACCAACATACTGCATGTAAATTCCTCATTCTTACTGCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000458099.2 ENST00000664591.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS GCA 72 bp | AATTGTTCTCACAGCAGTAAGAATGAGGAATTTACATaGAGTATGTTGGTTTACTTTACGCTGATCCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: NCSHSSKNEEFT*SMLVYFTLIPR Trigger: TCTGGGGATCAGCGTAAAGTAAACCAACATACTGCATGTAAATTCCTCATTCTTACTGCTGTGAGAACAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000458099.2 ENST00000664591.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS CAA 72 bp | TCTCTGCTCATTTACTTGATACTTACATGCAGTATGTaGGTTTACTTTACGCTGATCCCCAGAGTTTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: SLLIYLILTCSM*VYFTLIPRVSS Trigger: TGATGAAACTCTGGGGATCAGCGTAAAGTAAACCAACATACTGCATGTAAGTATCAAGTAAATGAGCAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000427474.2 ENST00000427914.5 ENST00000441169.2 ENST00000653537.1 ENST00000662825.1 ENST00000664567.1 ENST00000666408.1 |
||
| CDS CAA 72 bp | ACAAAAACTACTATTCCCTGGAAGTCTGTGGTACTTTaGAACTCTCTTAAAACTTTACCCTCCTTGAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TKTTIPWKSVVL*NSLKTLPSLKK Trigger: CTTCTTCAAGGAGGGTAAAGTTTTAAGAGAGTTCAAAAGTACCACAGACTTCCAGGGAATAGTAGTTTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427914.5 |
||
| CDS CAA 90 bp | TGCATTGTGCTATCTCATTACAGTTCTTTGAAAGCTCTGAAGTTTTaGGCTCCTAACAATTGTTCTCACAGCAGTAAGAATGAGGAATTT | + |
|
Preference number: 6 (lower is better) Translates to: CIVLSHYSSLKALKF*APNNCSHSSKNEEF Trigger: AAATTCCTCATTCTTACTGCTGTGAGAACAATTGTTAGGAGCCAAAAACTTCAGAGCTTTCAAAGAACTGTAATGAGATAGCACAATGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000427914.5 ENST00000458099.2 ENST00000664591.1 ENST00000666843.1 ENST00000669782.1 |
||
| CDS CAA 90 bp | AATTGTTCTCACAGCAGTAAGAATGAGGAATTTACATGCAGTATGTaGGTTTACTTTACGCTGATCCCCAGAGTTTCATCATTTAAACTA | + |
|
Preference number: 6 (lower is better) Translates to: NCSHSSKNEEFTCSM*VYFTLIPRVSSFKL Trigger: TAGTTTAAATGATGAAACTCTGGGGATCAGCGTAAAGTAAACCAACATACTGCATGTAAATTCCTCATTCTTACTGCTGTGAGAACAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000458099.2 ENST00000664591.1 ENST00000666843.1 ENST00000669782.1 |
||