Pregenerated sensors for LINC02050 (Homo sapiens)
Ensembl gene IDs: ENSG00000242781Ensembl transcript IDs: ENST00000473938.1, ENST00000654830.1, ENST00000654848.1, ENST00000658456.1, ENST00000667434.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGGCAGGCAGGCACAGAAGTGGCTGGACGTCGAGAGGAACACATTaGCGGAAGAACACACAAGCAGTTGCACACATTGGCGGAAGAACA | + |
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Preference number: 5 (lower is better) Translates to: QAGRHRSGWTSRGTH*RKNTQAVAHIGGRT Trigger: TGTTCTTCCGCCAATGTGTGCAACTGCTTGTGTGTTCTTCCGCCAATGTGTTCCTCTCGACGTCCAGCCACTTCTGTGCCTGCCTGCCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654830.1 ENST00000654848.1 ENST00000658456.1 |
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| CDS TCA 90 bp | AAGTTTCAACTTCGGTGCGGGATAAGGCCAATGACCCAGCAGTACTaGCTCGGGATGAGAGAAGGAAAGCGCTGGGTAGAGAAGGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: KFQLRCGIRPMTQQY*LGMREGKRWVEKGR Trigger: CCTGCCCTTCTCTACCCAGCGCTTTCCTTCTCTCATCCCGAGTCAGTACTGCTGGGTCATTGGCCTTATCCCGCACCGAAGTTGAAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658456.1 |
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| CDS GCA 90 bp | CTGGACGTCGAGAGGAACACATTGGCGGAAGAACACACAAGCAGTTaGACACATTGGCGGAAGAACACACAAGCAGCTGTGCCACACAAG | + |
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Preference number: 5 (lower is better) Translates to: LDVERNTLAEEHTSS*THWRKNTQAAVPHK Trigger: CTTGTGTGGCACAGCTGCTTGTGTGTTCTTCCGCCAATGTGTGCAACTGCTTGTGTGTTCTTCCGCCAATGTGTTCCTCTCGACGTCCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654848.1 ENST00000658456.1 |
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| CDS CCA 90 bp | CTTCGGTGCGGGATAAGGCCAATGACCCAGCCTTCAAGTAGCTCCTaGTGTCTGTTGTTCTGCTGTTTGTGTCCATGTGTCCTCGTTGTT | + |
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Preference number: 5 (lower is better) Translates to: LRCGIRPMTQPSSSS*CLLFCCLCPCVLVV Trigger: AACAACGAGGACACATGGACACAAACAGCAGAACAACAGACACCAGGAGCTACTTGAAGGCTGGGTCATTGGCCTTATCCCGCACCGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654830.1 |
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| CDS TCA 90 bp | AGTTTGCTTCAAATAATGGGCTCCATCTCCATCCATGATGAGTACTaGCTCGGGATGAGAGAAGGAAAGCGCTGGGTAGAGAAGGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SLLQIMGSISIHDEY*LGMREGKRWVEKGR Trigger: CCTGCCCTTCTCTACCCAGCGCTTTCCTTCTCTCATCCCGAGTCAGTACTCATCATGGATGGAGATGGAGCCCATTATTTGAAGCAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654830.1 |
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| CDS TCA 90 bp | GTCCCCAGTGAAACTCAACCTTCAAGTCAACGGCAGTTTAAAACCTaGAAACTGAGCGGCCAGTTCTGGGTGGAGTTCATGACCAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: VPSETQPSSQRQFKT*KLSGQFWVEFMTRV Trigger: CACTCTGGTCATGAACTCCACCCAGAACTGGCCGCTCAGTTTTCAGGTTTTAAACTGCCGTTGACTTGAAGGTTGAGTTTCACTGGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667434.1 |
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| CDS GCA 90 bp | ACTCTCACGCCGGTCCCTTCAAGTAGCTCCTGGTGTCTGTTGTTCTaGTGTTTGTGTCCATGTGTCCTCGTTGTTCAGCTGCCATTTATA | + |
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Preference number: 5 (lower is better) Translates to: TLTPVPSSSSWCLLF*CLCPCVLVVQLPFI Trigger: TATAAATGGCAGCTGAACAACGAGGACACATGGACACAAACAGCAGAACAACAGACACCAGGAGCTACTTGAAGGGACCGGCGTGAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473938.1 |
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| CDS GCA 90 bp | AGGCCAATGACCCAGCCTTCAAGTAGCTCCTGGTGTCTGTTGTTCTaGTGTTTGTGTCCATGTGTCCTCGTTGTTCAGCTGCCATTTATA | + |
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Preference number: 5 (lower is better) Translates to: RPMTQPSSSSWCLLF*CLCPCVLVVQLPFI Trigger: TATAAATGGCAGCTGAACAACGAGGACACATGGACACAAACAGCAGAACAACAGACACCAGGAGCTACTTGAAGGCTGGGTCATTGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654830.1 |
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| CDS GCA 90 bp | AGAAGAACTGATGATGTGAACAGATGGTGTAAGTTTCAACTTCGGTaGGGGATAAGGCCAATGACCCAGCCTGAAATCGGCAGCAACACT | + |
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Preference number: 5 (lower is better) Translates to: RRTDDVNRWCKFQLR*GIRPMTQPEIGSNT Trigger: AGTGTTGCTGCCGATTTCAGGCTGGGTCATTGGCCTTATCCCGCACCGAAGTTGAAACTTACACCATCTGTTCACATCATCAGTTCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654848.1 |
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| CDS GCA 90 bp | AGAAGAACTGATGATGTGAACAGATGGTGTAAGTTTCAACTTCGGTaGGGGATAAGGCCAATGACCCAGCCTTGGTTCATGTTTTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: RRTDDVNRWCKFQLR*GIRPMTQPWFMFWP Trigger: AGGCCAAAACATGAACCAAGGCTGGGTCATTGGCCTTATCCCGCACCGAAGTTGAAACTTACACCATCTGTTCACATCATCAGTTCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473938.1 |
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| CDS CCA 90 bp | TCGGCAGCAACACTGTTTTCAAATGTTCACTTCTGGACACAGGATTaGATCTCACTTCTCAACTATCTTGAAGTCAGGGGCAGCAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: SAATLFSNVHFWTQD*ISLLNYLEVRGSRV Trigger: CACTCTGCTGCCCCTGACTTCAAGATAGTTGAGAAGTGAGATCCAATCCTGTGTCCAGAAGTGAACATTTGAAAACAGTGTTGCTGCCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654848.1 |
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| CDS CCA 90 bp | CCCAGCCTGAAATCGGCAGCAACACTGTTTTCAAATGTTCACTTCTaGACACAGGATTGGATCTCACTTCTCAACTATCTTGAAGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: PSLKSAATLFSNVHF*TQDWISLLNYLEVR Trigger: CCTGACTTCAAGATAGTTGAGAAGTGAGATCCAATCCTGTGTCCAGAAGTGAACATTTGAAAACAGTGTTGCTGCCGATTTCAGGCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654848.1 |
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| CDS GCA 90 bp | AGAAGAACTGATGATGTGAACAGATGGTGTAAGTTTCAACTTCGGTaGGGGATAAGGCCAATGACCCAGCCAGTTGTATGGAGAAATGAA | + |
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Preference number: 5 (lower is better) Translates to: RRTDDVNRWCKFQLR*GIRPMTQPVVWRNE Trigger: TTCATTTCTCCATACAACTGGCTGGGTCATTGGCCTTATCCCGCACCGAAGTTGAAACTTACACCATCTGTTCACATCATCAGTTCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667434.1 |
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| CDS CCA 90 bp | ATAAAGGTGGAGGCTAAGGAGATTTATAATCTGCCATCTGCAACCTaGAGACTAAGGAGAGCCAGTGGAATTGTGCCAGTTGAAGTTCAA | + |
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Preference number: 5 (lower is better) Translates to: IKVEAKEIYNLPSAT*RLRRASGIVPVEVQ Trigger: TTGAACTTCAACTGGCACAATTCCACTGGCTCTCCTTAGTCTCCAGGTTGCAGATGGCAGATTATAAATCTCCTTAGCCTCCACCTTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000473938.1 ENST00000654830.1 ENST00000654848.1 ENST00000658456.1 ENST00000667434.1 |
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| CDS CCA 90 bp | TTTCAACTTCGGTGCGGGATAAGGCCAATGACCCAGCCAGTTGTATaGAGAAATGAACGTTCTCATATATTTTTGTTTGGAATTGAAATC | + |
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Preference number: 5 (lower is better) Translates to: FQLRCGIRPMTQPVV*RNERSHIFLFGIEI Trigger: GATTTCAATTCCAAACAAAAATATATGAGAACGTTCATTTCTCCATACAACTGGCTGGGTCATTGGCCTTATCCCGCACCGAAGTTGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667434.1 |
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| CDS CCA 90 bp | CCATGTGTCCTCGTTGTTCAGCTGCCATTTATAAGTGAGAATATATaGTATTTGCTTTGCTGTTCCTGTGTTAGTTTGCTTCAAATAATG | + |
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Preference number: 5 (lower is better) Translates to: PCVLVVQLPFISENI*YLLCCSCVSLLQIM Trigger: CATTATTTGAAGCAAACTAACACAGGAACAGCAAAGCAAATACCATATATTCTCACTTATAAATGGCAGCTGAACAACGAGGACACATGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000473938.1 ENST00000654830.1 |
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| CDS CCA 72 bp | AAAACCCCAAGACAGGCAGGCAGGCACAGAAGTGGCTaGACGTCGAGAGGAACACATTGGCGGAAGAACACA | + |
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Preference number: 6 (lower is better) Translates to: KTPRQAGRHRSG*TSRGTHWRKNT Trigger: TGTGTTCTTCCGCCAATGTGTTCCTCTCGACGTCCAGCCACTTCTGTGCCTGCCTGCCTGTCTTGGGGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000654830.1 ENST00000654848.1 ENST00000658456.1 |
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| CDS CAA 72 bp | CAGGCACAGAAGTGGCTGGACGTCGAGAGGAACACATaGGCGGAAGAACACACAAGCAGTTGCACACATTGG | + |
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Preference number: 6 (lower is better) Translates to: QAQKWLDVERNT*AEEHTSSCTHW Trigger: CCAATGTGTGCAACTGCTTGTGTGTTCTTCCGCCAATGTGTTCCTCTCGACGTCCAGCCACTTCTGTGCCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654830.1 ENST00000654848.1 ENST00000658456.1 |
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| CDS CAA 90 bp | CGAGAGGAACACATTGGCGGAAGAACACACAAGCAGTTGCACACATaGGCGGAAGAACACACAAGCAGCTGTGCCACACAAGCAGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: REEHIGGRTHKQLHT*AEEHTSSCATQAAV Trigger: CACAGCTGCTTGTGTGGCACAGCTGCTTGTGTGTTCTTCCGCCAATGTGTGCAACTGCTTGTGTGTTCTTCCGCCAATGTGTTCCTCTCG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654848.1 ENST00000658456.1 |
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| CDS GCA 72 bp | CCGGTCCCTTCAAGTAGCTCCTGGTGTCTGTTGTTCTaGTGTTTGTGTCCATGTGTCCTCGTTGTTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: PVPSSSSWCLLF*CLCPCVLVVQL Trigger: CAGCTGAACAACGAGGACACATGGACACAAACAGCAGAACAACAGACACCAGGAGCTACTTGAAGGGACCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473938.1 |
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| CDS GCA 72 bp | GAGAGGAACACATTGGCGGAAGAACACACAAGCAGTTaGACACATTGGCGGAAGAACACACAAGCAGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: ERNTLAEEHTSS*THWRKNTQAAV Trigger: CACAGCTGCTTGTGTGTTCTTCCGCCAATGTGTGCAACTGCTTGTGTGTTCTTCCGCCAATGTGTTCCTCTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654830.1 ENST00000654848.1 ENST00000658456.1 |
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| CDS GCA 72 bp | ACCCAGCCTTCAAGTAGCTCCTGGTGTCTGTTGTTCTaGTGTTTGTGTCCATGTGTCCTCGTTGTTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: TQPSSSSWCLLF*CLCPCVLVVQL Trigger: CAGCTGAACAACGAGGACACATGGACACAAACAGCAGAACAACAGACACCAGGAGCTACTTGAAGGCTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654830.1 |
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| CDS CCA 72 bp | ACATTGGCGGAAGAACACACAAGCAGTTGCACACATTaGCGGAAGAACACACAAGCAGCTGTGCCACACAAG | + |
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Preference number: 6 (lower is better) Translates to: TLAEEHTSSCTH*RKNTQAAVPHK Trigger: CTTGTGTGGCACAGCTGCTTGTGTGTTCTTCCGCCAATGTGTGCAACTGCTTGTGTGTTCTTCCGCCAATGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654848.1 ENST00000658456.1 |
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| CDS CAA 72 bp | CGAGAGGAACACATTGGCGGAAGAACACACAAGCAGTaGCACACATTGGCGGAAGAACACACAAGCAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: REEHIGGRTHKQ*HTLAEEHTSSC Trigger: ACAGCTGCTTGTGTGTTCTTCCGCCAATGTGTGCAACTGCTTGTGTGTTCTTCCGCCAATGTGTTCCTCTCG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654830.1 ENST00000654848.1 ENST00000658456.1 |
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| CDS CAA 72 bp | CACATTGGCGGAAGAACACACAAGCAGTTGCACACATaGGCGGAAGAACACACAAGCAGCTGTGCCACACAA | + |
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Preference number: 6 (lower is better) Translates to: HIGGRTHKQLHT*AEEHTSSCATQ Trigger: TTGTGTGGCACAGCTGCTTGTGTGTTCTTCCGCCAATGTGTGCAACTGCTTGTGTGTTCTTCCGCCAATGTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654848.1 ENST00000658456.1 |
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| CDS CAA 90 bp | ACGCCGGTCCCTTCAAGTAGCTCCTGGTGTCTGTTGTTCTGCTGTTaGTGTCCATGTGTCCTCGTTGTTCAGCTGCCATTTATAAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: TPVPSSSSWCLLFCC*CPCVLVVQLPFISE Trigger: CTCACTTATAAATGGCAGCTGAACAACGAGGACACATGGACACAAACAGCAGAACAACAGACACCAGGAGCTACTTGAAGGGACCGGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473938.1 |
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| CDS CAA 90 bp | ACTTCGGTGCGGGATAAGGCCAATGACCCAGCCTTGGTTCATGTTTaGGCCTCAGCTGGAATAATTTCTCCTTTCTATGGCTTCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: TSVRDKANDPALVHV*ASAGIISPFYGFSL Trigger: GAGGCTGAAGCCATAGAAAGGAGAAATTATTCCAGCTGAGGCCAAAACATGAACCAAGGCTGGGTCATTGGCCTTATCCCGCACCGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473938.1 |
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| CDS CCA 72 bp | TGTTTTGGCCTCAGCTGGAATAATTTCTCCTTTCTATaGCTTCAGCCTCCATACTCTCACGCCGGTCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: CFGLSWNNFSFL*LQPPYSHAGPF Trigger: GAAGGGACCGGCGTGAGAGTATGGAGGCTGAAGCCATAGAAAGGAGAAATTATTCCAGCTGAGGCCAAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473938.1 |
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| CDS TCA 72 bp | TCAACTTCGGTGCGGGATAAGGCCAATGACCCAGCCTaGAATCGGCAGCAACACTGTTTTCAAATGTTCACT | + |
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Preference number: 6 (lower is better) Translates to: STSVRDKANDPA*NRQQHCFQMFT Trigger: AGTGAACATTTGAAAACAGTGTTGCTGCCGATTTCAGGCTGGGTCATTGGCCTTATCCCGCACCGAAGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654848.1 |
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| CDS CAA 72 bp | CCTTCAAGTAGCTCCTGGTGTCTGTTGTTCTGCTGTTaGTGTCCATGTGTCCTCGTTGTTCAGCTGCCATTT | + |
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Preference number: 6 (lower is better) Translates to: PSSSSWCLLFCC*CPCVLVVQLPF Trigger: AAATGGCAGCTGAACAACGAGGACACATGGACACAAACAGCAGAACAACAGACACCAGGAGCTACTTGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000473938.1 ENST00000654830.1 |
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| CDS CAA 72 bp | CGGGATAAGGCCAATGACCCAGCCTTGGTTCATGTTTaGGCCTCAGCTGGAATAATTTCTCCTTTCTATGGC | + |
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Preference number: 6 (lower is better) Translates to: RDKANDPALVHV*ASAGIISPFYG Trigger: GCCATAGAAAGGAGAAATTATTCCAGCTGAGGCCAAAACATGAACCAAGGCTGGGTCATTGGCCTTATCCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473938.1 |
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| CDS CAA 72 bp | TCAACTTCGGTGCGGGATAAGGCCAATGACCCAGCCTaGGTTCATGTTTTGGCCTCAGCTGGAATAATTTCT | + |
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Preference number: 6 (lower is better) Translates to: STSVRDKANDPA*VHVLASAGIIS Trigger: AGAAATTATTCCAGCTGAGGCCAAAACATGAACCAAGGCTGGGTCATTGGCCTTATCCCGCACCGAAGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473938.1 |
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| CDS CAA 90 bp | ATGACCCAGCCTTCAAGTAGCTCCTGGTGTCTGTTGTTCTGCTGTTaGTGTCCATGTGTCCTCGTTGTTCAGCTGCCATTTATAAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: MTQPSSSSWCLLFCC*CPCVLVVQLPFISE Trigger: CTCACTTATAAATGGCAGCTGAACAACGAGGACACATGGACACAAACAGCAGAACAACAGACACCAGGAGCTACTTGAAGGCTGGGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654830.1 |
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| CDS TCA 72 bp | GAAACTCAACCTTCAAGTCAACGGCAGTTTAAAACCTaGAAACTGAGCGGCCAGTTCTGGGTGGAGTTCATG | + |
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Preference number: 6 (lower is better) Translates to: ETQPSSQRQFKT*KLSGQFWVEFM Trigger: CATGAACTCCACCCAGAACTGGCCGCTCAGTTTTCAGGTTTTAAACTGCCGTTGACTTGAAGGTTGAGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667434.1 |
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| CDS CCA 72 bp | AGCATGAGAACCAGAAGAACTGATGATGTGAACAGATaGTGTAAGTTTCAACTTCGGTGCGGGATAAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SMRTRRTDDVNR*CKFQLRCGIRP Trigger: TGGCCTTATCCCGCACCGAAGTTGAAACTTACACCATCTGTTCACATCATCAGTTCTTCTGGTTCTCATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000473938.1 ENST00000654830.1 ENST00000654848.1 ENST00000658456.1 ENST00000667434.1 |
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| CDS CCA 72 bp | ACACTGTTTTCAAATGTTCACTTCTGGACACAGGATTaGATCTCACTTCTCAACTATCTTGAAGTCAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: TLFSNVHFWTQD*ISLLNYLEVRG Trigger: GCCCCTGACTTCAAGATAGTTGAGAAGTGAGATCCAATCCTGTGTCCAGAAGTGAACATTTGAAAACAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654848.1 |
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| CDS CAA 90 bp | GTCCTCGTTGTTCAGCTGCCATTTATAAGTGAGAATATATGGTATTaGCTTTGCTGTTCCTGTGTTAGTTTGCTTCAAATAATGGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: VLVVQLPFISENIWY*LCCSCVSLLQIMGS Trigger: GGAGCCCATTATTTGAAGCAAACTAACACAGGAACAGCAAAGCAAATACCATATATTCTCACTTATAAATGGCAGCTGAACAACGAGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000473938.1 ENST00000654830.1 |
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| CDS CCA 72 bp | GAGTTTGGAAGATTTGTTGTTTTTCTGAGGTCTTTTTaGCTTGCAGAAAGCTACTTCCTTTGTCCTCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: EFGRFVVFLRSF*LAESYFLCPQR Trigger: TCTTTGAGGACAAAGGAAGTAGCTTTCTGCAAGCCAAAAAGACCTCAGAAAAACAACAAATCTTCCAAACTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000473938.1 ENST00000654830.1 ENST00000654848.1 ENST00000658456.1 ENST00000667434.1 |
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| CDS CAA 72 bp | AGAGTTTGGAAGATTTGTTGTTTTTCTGAGGTCTTTTaGGCTTGCAGAAAGCTACTTCCTTTGTCCTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: RVWKICCFSEVF*ACRKLLPLSSK Trigger: CTTTGAGGACAAAGGAAGTAGCTTTCTGCAAGCCAAAAAGACCTCAGAAAAACAACAAATCTTCCAAACTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000473938.1 ENST00000654830.1 ENST00000654848.1 ENST00000658456.1 ENST00000667434.1 |
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| CDS CAA 90 bp | ATAAGTGAGAATATATGGTATTTGCTTTGCTGTTCCTGTGTTAGTTaGCTTCAAATAATGGGCTCCATCTCCATCCATGATGCAGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: ISENIWYLLCCSCVS*LQIMGSISIHDAVV Trigger: TACAACTGCATCATGGATGGAGATGGAGCCCATTATTTGAAGCAAACTAACACAGGAACAGCAAAGCAAATACCATATATTCTCACTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473938.1 |
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| CDS CAA 72 bp | AATATATGGTATTTGCTTTGCTGTTCCTGTGTTAGTTaGCTTCAAATAATGGGCTCCATCTCCATCCATGAT | + |
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Preference number: 6 (lower is better) Translates to: NIWYLLCCSCVS*LQIMGSISIHD Trigger: ATCATGGATGGAGATGGAGCCCATTATTTGAAGCAAACTAACACAGGAACAGCAAAGCAAATACCATATATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000473938.1 ENST00000654830.1 |
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