Pregenerated sensors for LINC02044 (Homo sapiens)
Ensembl gene IDs: ENSG00000243795Ensembl transcript IDs: ENST00000490139.1
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AATGCCCGAAGTTGGCAGTGTGAGGGCTGGAGGTATCTGGGGTGCTaGGGAACTGAAGGAGTGGGAGGAACAGTGGTGAAGAGTTTTGCC | + |
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Preference number: 5 (lower is better) Translates to: NARSWQCEGWRYLGC*GTEGVGGTVVKSFA Trigger: GGCAAAACTCTTCACCACTGTTCCTCCCACTCCTTCAGTTCCCCAGCACCCCAGATACCTCCAGCCCTCACACTGCCAACTTCGGGCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS GCA 90 bp | AGGAATGCCCGAAGTTGGCAGTGTGAGGGCTGGAGGTATCTGGGGTaGTGGGGAACTGAAGGAGTGGGAGGAACAGTGGTGAAGAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: RNARSWQCEGWRYLG*WGTEGVGGTVVKSF Trigger: AAAACTCTTCACCACTGTTCCTCCCACTCCTTCAGTTCCCCAGCACCCCAGATACCTCCAGCCCTCACACTGCCAACTTCGGGCATTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS CCA 90 bp | AACAGCTCACCACAGCTTAGCCCAGTCTTCCAGTCTAGGCCAGTCTaGTCTCCTCAGGTTCAAGCCCAGGTCTCCTTATCCCTCTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: NSSPQLSPVFQSRPV*SPQVQAQVSLSLSL Trigger: CAGAGAGAGGGATAAGGAGACCTGGGCTTGAACCTGAGGAGACCAGACTGGCCTAGACTGGAAGACTGGGCTAAGCTGTGGTGAGCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS TCA 90 bp | ATTTCCAATAGTCTCTGTGCCAATTCCCAGTTGTTCCCACAAGGATaGCTCTTTAGCTGGTTGCAAGAGGGAGGCACAAAGAAGTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: ISNSLCANSQLFPQG*LFSWLQEGGTKKSG Trigger: CCCAGACTTCTTTGTGCCTCCCTCTTGCAACCAGCTAAAGAGTCATCCTTGTGGGAACAACTGGGAATTGGCACAGAGACTATTGGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS TCA 90 bp | GTACTAATAAGGCATTCGGGAGACACTCGGTTCCAGGATCACCTGTaGTTTCCAATAGTCTCTGTGCCAATTCCCAGTTGTTCCCACAAG | + |
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Preference number: 5 (lower is better) Translates to: VLIRHSGDTRFQDHL*FPIVSVPIPSCSHK Trigger: CTTGTGGGAACAACTGGGAATTGGCACAGAGACTATTGGAAATCACAGGTGATCCTGGAACCGAGTGTCTCCCGAATGCCTTATTAGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS CCA 90 bp | CAGAAACCTAACAAAGAGTACTGGACAATGTGGAAACTTAAGAAGTaGGACAACATAGGCACTACCAGCTATCGGGGTGTAAGAGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: QKPNKEYWTMWKLKK*DNIGTTSYRGVREG Trigger: CCCCTCTCTTACACCCCGATAGCTGGTAGTGCCTATGTTGTCCCACTTCTTAAGTTTCCACATTGTCCAGTACTCTTTGTTAGGTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS GCA 90 bp | CCAGGGCTGGCTGCTGCCAGTTGGGAACATTATAGAAGGTTATCCTaGACTGAGTATGAAATTAAGAGAGTGAAATTCCCTTTGGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: PGLAAASWEHYRRLS*TEYEIKRVKFPLEG Trigger: ACCTTCCAAAGGGAATTTCACTCTCTTAATTTCATACTCAGTGCAGGATAACCTTCTATAATGTTCCCAACTGGCAGCAGCCAGCCCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS CCA 90 bp | TTTTTCAGGGACTTCTGGAATCCATCTGCAAGGAATGCCAGCTGGTaGCTCTTAAATACCCAGAAACCTAACAAAGAGTACTGGACAATG | + |
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Preference number: 5 (lower is better) Translates to: FFRDFWNPSARNASW*LLNTQKPNKEYWTM Trigger: CATTGTCCAGTACTCTTTGTTAGGTTTCTGGGTATTTAAGAGCCACCAGCTGGCATTCCTTGCAGATGGATTCCAGAAGTCCCTGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS CCA 90 bp | TTCTTTTTCAGGGACTTCTGGAATCCATCTGCAAGGAATGCCAGCTaGTGGCTCTTAAATACCCAGAAACCTAACAAAGAGTACTGGACA | + |
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Preference number: 5 (lower is better) Translates to: FFFRDFWNPSARNAS*WLLNTQKPNKEYWT Trigger: TGTCCAGTACTCTTTGTTAGGTTTCTGGGTATTTAAGAGCCACCAGCTGGCATTCCTTGCAGATGGATTCCAGAAGTCCCTGAAAAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS CCA 90 bp | CAAAAAGAGATTCCCAACAAGTACAGACAATGGAACAGGCTGCCTTaGAAAGGACTAAACTTCTCCTTACAGGAAGTACTTCATCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: QKEIPNKYRQWNRLP*KGLNFSLQEVLHPG Trigger: CCCTGGATGAAGTACTTCCTGTAAGGAGAAGTTTAGTCCTTTCCAAGGCAGCCTGTTCCATTGTCTGTACTTGTTGGGAATCTCTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS CCA 90 bp | TGGCTCTTAAATACCCAGAAACCTAACAAAGAGTACTGGACAATGTaGAAACTTAAGAAGTGGGACAACATAGGCACTACCAGCTATCGG | + |
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Preference number: 5 (lower is better) Translates to: WLLNTQKPNKEYWTM*KLKKWDNIGTTSYR Trigger: CCGATAGCTGGTAGTGCCTATGTTGTCCCACTTCTTAAGTTTCCACATTGTCCAGTACTCTTTGTTAGGTTTCTGGGTATTTAAGAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS TCA 90 bp | AAAGGGGTGTCTGATTCATTTAATCCAGATATTCTAACACATGTGTaGTCCGGGAGTCCTCTGCTGTCTTGCAAAATTCTATCTTGGTAC | + |
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Preference number: 5 (lower is better) Translates to: KGVSDSFNPDILTHV*SGSPLLSCKILSWY Trigger: GTACCAAGATAGAATTTTGCAAGACAGCAGAGGACTCCCGGATCACACATGTGTTAGAATATCTGGATTAAATGAATCAGACACCCCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS TCA 90 bp | AACATTATAGAAGGTTATCCTGCACTGAGTATGAAATTAAGAGAGTaGAATTCCCTTTGGAAGGTTCCAAGTAGTCCCAAGAGGCTTGTA | + |
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Preference number: 5 (lower is better) Translates to: NIIEGYPALSMKLRE*NSLWKVPSSPKRLV Trigger: TACAAGCCTCTTGGGACTACTTGGAACCTTCCAAAGGGAATTTCACTCTCTTAATTTCATACTCAGTGCAGGATAACCTTCTATAATGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS TCA 90 bp | CAACCCCAACAATTTATTCCTTCTGTGTTCAATATGAGTCCAATATaGCTCTACAATTTCTTTTTCAGGGACTTCTGGAATCCATCTGCA | + |
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Preference number: 5 (lower is better) Translates to: QPQQFIPSVFNMSPI*LYNFFFRDFWNPSA Trigger: TGCAGATGGATTCCAGAAGTCCCTGAAAAAGAAATTGTAGAGTCATATTGGACTCATATTGAACACAGAAGGAATAAATTGTTGGGGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS TCA 90 bp | AAAGGGAAAATAAAAGAGTCTGTTGAGAGCCAATGTATGAGAGTCTaGCTGGATGAATTCACTGGAGAAATTGAATACTCTGTACAACAA | + |
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Preference number: 5 (lower is better) Translates to: KGKIKESVESQCMRV*LDEFTGEIEYSVQQ Trigger: TTGTTGTACAGAGTATTCAATTTCTCCAGTGAATTCATCCAGTCAGACTCTCATACATTGGCTCTCAACAGACTCTTTTATTTTCCCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS CCA 72 bp | AGCCCAGTTAGACACCAAGGAAGGAATGCCCGAAGTTaGCAGTGTGAGGGCTGGAGGTATCTGGGGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SPVRHQGRNARS*QCEGWRYLGCW Trigger: CCAGCACCCCAGATACCTCCAGCCCTCACACTGCCAACTTCGGGCATTCCTTCCTTGGTGTCTAACTGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS TCA 72 bp | ACTGCCAGCTTAATGCACAGCTCTCCACTGCATCCCTaGCTGGGGCTCTTCTGTCCTCTGCTTCATCACTTC | + |
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Preference number: 6 (lower is better) Translates to: TASLMHSSPLHP*LGLFCPLLHHF Trigger: GAAGTGATGAAGCAGAGGACAGAAGAGCCCCAGTCAGGGATGCAGTGGAGAGCTGTGCATTAAGCTGGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS TCA 72 bp | GGTGCTGGGGAACTGAAGGAGTGGGAGGAACAGTGGTaGAGAGTTTTGCCTACTCTGCAGTTTAGCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: GAGELKEWEEQW*RVLPTLQFSLR Trigger: CCTCAGGCTAAACTGCAGAGTAGGCAAAACTCTTCACCACTGTTCCTCCCACTCCTTCAGTTCCCCAGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS TCA 72 bp | AGTCTCTGTGCCAATTCCCAGTTGTTCCCACAAGGATaGCTCTTTAGCTGGTTGCAAGAGGGAGGCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: SLCANSQLFPQG*LFSWLQEGGTK Trigger: CTTTGTGCCTCCCTCTTGCAACCAGCTAAAGAGTCATCCTTGTGGGAACAACTGGGAATTGGCACAGAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS TCA 72 bp | AGGCATTCGGGAGACACTCGGTTCCAGGATCACCTGTaGTTTCCAATAGTCTCTGTGCCAATTCCCAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: RHSGDTRFQDHL*FPIVSVPIPSC Trigger: ACAACTGGGAATTGGCACAGAGACTATTGGAAATCACAGGTGATCCTGGAACCGAGTGTCTCCCGAATGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS CCA 72 bp | CTCCACAAGTTAGAAAGTAGATCCGTCCTCCTTTCCTaGACTGCCTCCAAAACAACACAAGGAGGGAGACAC | + |
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Preference number: 6 (lower is better) Translates to: LHKLESRSVLLS*TASKTTQGGRH Trigger: GTGTCTCCCTCCTTGTGTTGTTTTGGAGGCAGTCCAGGAAAGGAGGACGGATCTACTTTCTAACTTGTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS TCA 72 bp | AAGACAGATATCACCTTCTCCCACCAGGACTCTCCATaGACTATTTATGTCAGCTCTTCTTCCCAACTGCCA | + |
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Preference number: 6 (lower is better) Translates to: KTDITFSHQDSP*TIYVSSSSQLP Trigger: TGGCAGTTGGGAAGAAGAGCTGACATAAATAGTTCATGGAGAGTCCTGGTGGGAGAAGGTGATATCTGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS CCA 72 bp | GACTTCTGGAATCCATCTGCAAGGAATGCCAGCTGGTaGCTCTTAAATACCCAGAAACCTAACAAAGAGTAC | + |
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Preference number: 6 (lower is better) Translates to: DFWNPSARNASW*LLNTQKPNKEY Trigger: GTACTCTTTGTTAGGTTTCTGGGTATTTAAGAGCCACCAGCTGGCATTCCTTGCAGATGGATTCCAGAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS CAA 72 bp | GATTCCCAACAAGTACAGACAATGGAACAGGCTGCCTaGGAAAGGACTAAACTTCTCCTTACAGGAAGTACT | + |
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Preference number: 6 (lower is better) Translates to: DSQQVQTMEQAA*ERTKLLLTGST Trigger: AGTACTTCCTGTAAGGAGAAGTTTAGTCCTTTCCAAGGCAGCCTGTTCCATTGTCTGTACTTGTTGGGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS CAA 90 bp | ACAAAAAGAGATTCCCAACAAGTACAGACAATGGAACAGGCTGCCTaGGAAAGGACTAAACTTCTCCTTACAGGAAGTACTTCATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: TKRDSQQVQTMEQAA*ERTKLLLTGSTSSR Trigger: CCTGGATGAAGTACTTCCTGTAAGGAGAAGTTTAGTCCTTTCCAAGGCAGCCTGTTCCATTGTCTGTACTTGTTGGGAATCTCTTTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS GCA 72 bp | GCTGCTGCCAGTTGGGAACATTATAGAAGGTTATCCTaGACTGAGTATGAAATTAAGAGAGTGAAATTCCCT | + |
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Preference number: 6 (lower is better) Translates to: AAASWEHYRRLS*TEYEIKRVKFP Trigger: AGGGAATTTCACTCTCTTAATTTCATACTCAGTGCAGGATAACCTTCTATAATGTTCCCAACTGGCAGCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS CCA 72 bp | AATACCCAGAAACCTAACAAAGAGTACTGGACAATGTaGAAACTTAAGAAGTGGGACAACATAGGCACTACC | + |
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Preference number: 6 (lower is better) Translates to: NTQKPNKEYWTM*KLKKWDNIGTT Trigger: GGTAGTGCCTATGTTGTCCCACTTCTTAAGTTTCCACATTGTCCAGTACTCTTTGTTAGGTTTCTGGGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS TCA 72 bp | TCTGATTCATTTAATCCAGATATTCTAACACATGTGTaGTCCGGGAGTCCTCTGCTGTCTTGCAAAATTCTA | + |
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Preference number: 6 (lower is better) Translates to: SDSFNPDILTHV*SGSPLLSCKIL Trigger: TAGAATTTTGCAAGACAGCAGAGGACTCCCGGATCACACATGTGTTAGAATATCTGGATTAAATGAATCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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| CDS TCA 72 bp | ATAAAAGAGTCTGTTGAGAGCCAATGTATGAGAGTCTaGCTGGATGAATTCACTGGAGAAATTGAATACTCT | + |
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Preference number: 6 (lower is better) Translates to: IKESVESQCMRV*LDEFTGEIEYS Trigger: AGAGTATTCAATTTCTCCAGTGAATTCATCCAGTCAGACTCTCATACATTGGCTCTCAACAGACTCTTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490139.1 |
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