Pregenerated sensors for LINC02043 (Homo sapiens)

Ensembl gene IDs: ENSG00000232233

Ensembl transcript IDs: ENST00000419745.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TTTCTATTCCACAAAACCGCCACTGTCATCATGGCCCGTTCTCAATaGGCCGCTGGGCACACCTCCCAGACGGGGTGGTGGCCGGGCAGA	+
Preference number: 5 (lower is better) Translates to: FLFHKTATVIMARSQ*AAGHTSQTGWWPGR Trigger: TCTGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGAGAACGGGCCATGATGACAGTGGCGGTTTTGTGGAATAGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419745.1
CDS CCA 90 bp	GGTGGAGGTTGTAGCGAGCCGAGATCACGCCACTGTACTCCAGTCTaGGCACCATTGAGCACAGCAAATCTTGATGCGCCAGGGACTGGG	+
Preference number: 5 (lower is better) Translates to: GGGCSEPRSRHCTPV*APLSTANLDAPGTG Trigger: CCCAGTCCCTGGCGCATCAAGATTTGCTGTGCTCAATGGTGCCCAGACTGGAGTACAGTGGCGTGATCTCGGCTCGCTACAACCTCCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419745.1
CDS CCA 72 bp	CGCCACTGTCATCATGGCCCGTTCTCAATGAGCCGCTaGGCACACCTCCCAGACGGGGTGGTGGCCGGGCAG	+
Preference number: 6 (lower is better) Translates to: RHCHHGPFSMSR*AHLPDGVVAGQ Trigger: CTGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGAGAACGGGCCATGATGACAGTGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419745.1
CDS CCA 72 bp	TGGGCAGCTGGGCAGAGACGCTCCTCCCTTCCTAGATaGGATGGCGGCTGGGCAGAGACGCTCCTCACTTCC	+
Preference number: 6 (lower is better) Translates to: WAAGQRRSSLPR*DGGWAETLLTS Trigger: GGAAGTGAGGAGCGTCTCTGCCCAGCCGCCATCCCATCTAGGAAGGGAGGAGCGTCTCTGCCCAGCTGCCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419745.1
CDS TCA 72 bp	CGAGATCACGCCACTGTACTCCAGTCTGGGCACCATTaGGCACAGCAAATCTTGATGCGCCAGGGACTGGGG	+
Preference number: 6 (lower is better) Translates to: RDHATVLQSGHH*AQQILMRQGLG Trigger: CCCCAGTCCCTGGCGCATCAAGATTTGCTGTGCTCAATGGTGCCCAGACTGGAGTACAGTGGCGTGATCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419745.1
CDS CCA 72 bp	CCCCCTTTCTATTCCACAAAACCGCCACTGTCATCATaGCCCGTTCTCAATGAGCCGCTGGGCACACCTCCC	+
Preference number: 6 (lower is better) Translates to: PPFYSTKPPLSS*PVLNEPLGTPP Trigger: GGGAGGTGTGCCCAGCGGCTCATTGAGAACGGGCCATGATGACAGTGGCGGTTTTGTGGAATAGAAAGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419745.1
CDS CCA 72 bp	TGTAGCGAGCCGAGATCACGCCACTGTACTCCAGTCTaGGCACCATTGAGCACAGCAAATCTTGATGCGCCA	+
Preference number: 6 (lower is better) Translates to: CSEPRSRHCTPV*APLSTANLDAP Trigger: TGGCGCATCAAGATTTGCTGTGCTCAATGGTGCCCAGACTGGAGTACAGTGGCGTGATCTCGGCTCGCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419745.1
CDS CCA 72 bp	ACATCTTGCACCGCCCTTAATCCATTCAACCCTGAGTaGATACAGCACATGTTTCAGAGAGCACAGGGTTGG	+
Preference number: 6 (lower is better) Translates to: TSCTALNPFNPE*IQHMFQRAQGW Trigger: CCAACCCTGTGCTCTCTGAAACATGTGCTGTATCCACTCAGGGTTGAATGGATTAAGGGCGGTGCAAGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419745.1