Pregenerated sensors for LINC02036 (Homo sapiens)
Ensembl gene IDs: ENSG00000225742Ensembl transcript IDs: ENST00000415869.6, ENST00000432908.2, ENST00000653788.1, ENST00000654010.1, ENST00000657249.1, ENST00000658228.1, ENST00000662346.1, ENST00000662552.1, ENST00000664894.1, ENST00000666638.1, ENST00000667386.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GTGGGTCCCGGGACAGAGCCCAGGGAGAGACAGGCGTTCGCCAAGTaGCAGCAAAGTGACTGGATGAAAAATGGGCCACGTGCTGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: VGPGTEPRERQAFAK*QQSDWMKNGPRAGA Trigger: GGCCCCAGCACGTGGCCCATTTTTCATCCAGTCACTTTGCTGGCACTTGGCGAACGCCTGTCTCTCCCTGGGCTCTGTCCCGGGACCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000432908.2 |
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| CDS TCA 90 bp | TTTGATGGGTGCTGGTGCAGCAGCCGACTTAGGAACCAGAGGAGGTaGAGACACCCAGGAGATCAGAGCAGGGCAGCCCAGCACTGTCCG | + |
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Preference number: 5 (lower is better) Translates to: FDGCWCSSRLRNQRR*RHPGDQSRAAQHCP Trigger: CGGACAGTGCTGGGCTGCCCTGCTCTGATCTCCTGGGTGTCTTCACCTCCTCTGGTTCCTAAGTCGGCTGCTGCACCAGCACCCATCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000415869.6 ENST00000432908.2 ENST00000653788.1 ENST00000654010.1 ENST00000657249.1 ENST00000658228.1 ENST00000662346.1 ENST00000662552.1 ENST00000664894.1 ENST00000667386.1 |
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| CDS GCA 90 bp | GACTTGGGAGCTGAAGAAGTGCCAACGGGAAGAAGGATGAGAGTTTaGTGTGGGTCCCGGGACAGAGCCCAGGGAGAGACAGGCGTTCGC | + |
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Preference number: 5 (lower is better) Translates to: DLGAEEVPTGRRMRV*CGSRDRAQGETGVR Trigger: GCGAACGCCTGTCTCTCCCTGGGCTCTGTCCCGGGACCCACAGCAAACTCTCATCCTTCTTCCCGTTGGCACTTCTTCAGCTCCCAAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432908.2 |
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| CDS TCA 90 bp | GGTTCCAGAGAGGTGCCAAGGAAATATGGCTCAGCCGCATCTCCATaGGGAGGAGTAAGTCCATGCTTCTGCCCACAGGGGCCTTCTAGG | + |
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Preference number: 5 (lower is better) Translates to: GSREVPRKYGSAASP*GGVSPCFCPQGPSR Trigger: CCTAGAAGGCCCCTGTGGGCAGAAGCATGGACTTACTCCTCCTCATGGAGATGCGGCTGAGCCATATTTCCTTGGCACCTCTCTGGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000415869.6 ENST00000432908.2 ENST00000653788.1 ENST00000654010.1 ENST00000657249.1 ENST00000658228.1 ENST00000662346.1 ENST00000662552.1 ENST00000664894.1 ENST00000666638.1 ENST00000667386.1 |
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| CDS TCA 90 bp | CCTATTCGAGACTCTCAGGTTTTAAGTAGGTCTTCCGCACCTCCCTaGGTCTCGACGAGCTCCTGGGCATCATGGGCCCACTGGACTCCT | + |
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Preference number: 5 (lower is better) Translates to: PIRDSQVLSRSSAPP*VSTSSWASWAHWTP Trigger: AGGAGTCCAGTGGGCCCATGATGCCCAGGAGCTCGTCGAGACTCAGGGAGGTGCGGAAGACCTACTTAAAACCTGAGAGTCTCGAATAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657249.1 ENST00000662552.1 ENST00000664894.1 |
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| CDS CCA 90 bp | AGCGAGGAACTGCAGTGGCATGACCCCTCTCCTCCACTGTCTCACTaGGCTTCACTCGACCACATGGAACTGAAATCATGGGCTTGCCTA | + |
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Preference number: 5 (lower is better) Translates to: SEELQWHDPSPPLSH*ASLDHMELKSWACL Trigger: TAGGCAAGCCCATGATTTCAGTTCCATGTGGTCGAGTGAAGCCCAGTGAGACAGTGGAGGAGAGGGGTCATGCCACTGCAGTTCCTCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657249.1 ENST00000662346.1 |
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| CDS TCA 90 bp | TTTGATGGGTGCTGGTGCAGCAGCCGACTTAGGAACCAGAGGAGGTaGAGACACCCAGGAGATCAGAGCAGGGCTGATGAACAAAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: FDGCWCSSRLRNQRR*RHPGDQSRADEQRQ Trigger: TTGCCTTTGTTCATCAGCCCTGCTCTGATCTCCTGGGTGTCTTCACCTCCTCTGGTTCCTAAGTCGGCTGCTGCACCAGCACCCATCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666638.1 |
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| CDS CCA 90 bp | CCAGGAGATCAGAGCAGGGCAGCCCAGCACTGTCCGAAACTCGCCTaGACAAGTCCAACTTCATTCTTTTCAGTACGACTAGCTCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: PGDQSRAAQHCPKLA*TSPTSFFSVRLAPV Trigger: CACAGGAGCTAGTCGTACTGAAAAGAATGAAGTTGGACTTGTCCAGGCGAGTTTCGGACAGTGCTGGGCTGCCCTGCTCTGATCTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000415869.6 ENST00000432908.2 ENST00000653788.1 ENST00000654010.1 ENST00000657249.1 ENST00000658228.1 ENST00000662346.1 ENST00000662552.1 ENST00000664894.1 ENST00000667386.1 |
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| CDS GCA 90 bp | ACAGGTCCATGTTCACATACAGATCCACATTCACACACACACAGTTaGACACTCACACACAGGCCCACACTCACACACACAGGTCCACAC | + |
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Preference number: 5 (lower is better) Translates to: TGPCSHTDPHSHTHS*TLTHRPTLTHTGPH Trigger: GTGTGGACCTGTGTGTGTGAGTGTGGGCCTGTGTGTGAGTGTGCAACTGTGTGTGTGTGAATGTGGATCTGTATGTGAACATGGACCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667386.1 |
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| CDS TCA 90 bp | GATCAACCTGAAATAAAATGGCTCCAACAGGGCAGAGGATGCCTCTaGGAGGTTCTGAGGACAGGAGCAAGAGACTTTGGTGTTATTTGG | + |
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Preference number: 5 (lower is better) Translates to: DQPEIKWLQQGRGCL*EVLRTGARDFGVIW Trigger: CCAAATAACACCAAAGTCTCTTGCTCCTGTCCTCAGAACCTCTCAGAGGCATCCTCTGCCCTGTTGGAGCCATTTTATTTCAGGTTGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000415869.6 ENST00000432908.2 ENST00000653788.1 ENST00000654010.1 ENST00000658228.1 ENST00000662346.1 ENST00000662552.1 ENST00000664894.1 ENST00000666638.1 ENST00000667386.1 |
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| CDS TCA 90 bp | GGGGAGAGAAACTACAAGGAAGAAGGGTTTGGAAACTGCATCCAGTaGAGCATGGATGGAAAACCCAGGGATTTGCCTGGAGAAGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: GERNYKEEGFGNCIQ*SMDGKPRDLPGEEK Trigger: TTTCTCTTCTCCAGGCAAATCCCTGGGTTTTCCATCCATGCTTCACTGGATGCAGTTTCCAAACCCTTCTTCCTTGTAGTTTCTCTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432908.2 |
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| CDS TCA 90 bp | GAAGGCAGAAGTCAAGTTCATCAGCAAAAGTGTTCAAGAAATTCTTaGAATGGGCCCTGGGCAGCTGGAGCATATCCAGGGGAGAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: EGRSQVHQQKCSRNS*NGPWAAGAYPGERN Trigger: GTTTCTCTCCCCTGGATATGCTCCAGCTGCCCAGGGCCCATTTCAAGAATTTCTTGAACACTTTTGCTGATGAACTTGACTTCTGCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432908.2 |
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| CDS TCA 90 bp | GTTTTAAGTAGGTCTTCCGCACCTTTGGCTTATGATGAGGCTGAATaGAAGGGCAGGGAGCTATGGATCATCCTTGCTCTCTCGTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: VLSRSSAPLAYDEAE*KGRELWIILALSFL Trigger: AAGGAACGAGAGAGCAAGGATGATCCATAGCTCCCTGCCCTTTCATTCAGCCTCATCATAAGCCAAAGGTGCGGAAGACCTACTTAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653788.1 ENST00000662346.1 |
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| CDS GCA 90 bp | TTGGAAACTGCATCCAGTGAAGCATGGATGGAAAACCCAGGGATTTaGCTGGAGAAGAGAAAACACAGAGAGGACTTGGGAGCTGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: LETASSEAWMENPGI*LEKRKHREDLGAEE Trigger: TTCTTCAGCTCCCAAGTCCTCTCTGTGTTTTCTCTTCTCCAGGCAAATCCCTGGGTTTTCCATCCATGCTTCACTGGATGCAGTTTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432908.2 |
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| CDS CCA 90 bp | CTACAAGGAAGAAGGGTTTGGAAACTGCATCCAGTGAAGCATGGATaGAAAACCCAGGGATTTGCCTGGAGAAGAGAAAACACAGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: LQGRRVWKLHPVKHG*KTQGFAWRRENTER Trigger: CCTCTCTGTGTTTTCTCTTCTCCAGGCAAATCCCTGGGTTTTCCATCCATGCTTCACTGGATGCAGTTTCCAAACCCTTCTTCCTTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432908.2 |
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| CDS CCA 90 bp | AGCTGGAGCATATCCAGGGGAGAGAAACTACAAGGAAGAAGGGTTTaGAAACTGCATCCAGTGAAGCATGGATGGAAAACCCAGGGATTT | + |
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Preference number: 5 (lower is better) Translates to: SWSISRGEKLQGRRV*KLHPVKHGWKTQGF Trigger: AAATCCCTGGGTTTTCCATCCATGCTTCACTGGATGCAGTTTCCAAACCCTTCTTCCTTGTAGTTTCTCTCCCCTGGATATGCTCCAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432908.2 |
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| CDS CCA 90 bp | TCAGCAAAAGTGTTCAAGAAATTCTTGAAATGGGCCCTGGGCAGCTaGAGCATATCCAGGGGAGAGAAACTACAAGGAAGAAGGGTTTGG | + |
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Preference number: 5 (lower is better) Translates to: SAKVFKKFLKWALGS*SISRGEKLQGRRVW Trigger: CCAAACCCTTCTTCCTTGTAGTTTCTCTCCCCTGGATATGCTCCAGCTGCCCAGGGCCCATTTCAAGAATTTCTTGAACACTTTTGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432908.2 |
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| CDS CCA 90 bp | GAAACTACAAGGAAGAAGGGTTTGGAAACTGCATCCAGTGAAGCATaGATGGAAAACCCAGGGATTTGCCTGGAGAAGAGAAAACACAGA | + |
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Preference number: 5 (lower is better) Translates to: ETTRKKGLETASSEA*MENPGICLEKRKHR Trigger: TCTGTGTTTTCTCTTCTCCAGGCAAATCCCTGGGTTTTCCATCCATGCTTCACTGGATGCAGTTTCCAAACCCTTCTTCCTTGTAGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432908.2 |
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| CDS CCA 90 bp | CAGAAGTCAAGTTCATCAGCAAAAGTGTTCAAGAAATTCTTGAAATaGGCCCTGGGCAGCTGGAGCATATCCAGGGGAGAGAAACTACAA | + |
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Preference number: 5 (lower is better) Translates to: QKSSSSAKVFKKFLK*ALGSWSISRGEKLQ Trigger: TTGTAGTTTCTCTCCCCTGGATATGCTCCAGCTGCCCAGGGCCCATTTCAAGAATTTCTTGAACACTTTTGCTGATGAACTTGACTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432908.2 |
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| CDS CCA 90 bp | GTTCACAGCACGCATTCCCACACTTCTTGTCCACTCATAAAGCAATaGATAAGAGAGACGGATATGCACAAATCTACTAACCCATCAACA | + |
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Preference number: 5 (lower is better) Translates to: VHSTHSHTSCPLIKQ*IRETDMHKSTNPST Trigger: TGTTGATGGGTTAGTAGATTTGTGCATATCCGTCTCTCTTATCCATTGCTTTATGAGTGGACAAGAAGTGTGGGAATGCGTGCTGTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654010.1 |
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| CDS GCA 90 bp | AGGTCCACATTCACACACAAGATCCACACTCACACACACAGGTCCTaGATCTCGCTGAATTTAATTAAGGATCAACCTGAAATAAAATGG | + |
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Preference number: 5 (lower is better) Translates to: RSTFTHKIHTHTHRS*ISLNLIKDQPEIKW Trigger: CCATTTTATTTCAGGTTGATCCTTAATTAAATTCAGCGAGATGCAGGACCTGTGTGTGTGAGTGTGGATCTTGTGTGTGAATGTGGACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667386.1 |
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| CDS CCA 72 bp | CAGGTTTGGGACAGGGCGAAGTGCCAGGCGGTCTCCTaGCCTCGGTCCCTGACAGCGAGGGCAGCAGCGAAG | + |
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Preference number: 6 (lower is better) Translates to: QVWDRAKCQAVS*PRSLTARAAAK Trigger: CTTCGCTGCTGCCCTCGCTGTCAGGGACCGAGGCCAGGAGACCGCCTGGCACTTCGCCCTGTCCCAAACCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666638.1 |
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| CDS TCA 72 bp | TGCTGGTGCAGCAGCCGACTTAGGAACCAGAGGAGGTaGAGACACCCAGGAGATCAGAGCAGGGCAGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: CWCSSRLRNQRR*RHPGDQSRAAQ Trigger: CTGGGCTGCCCTGCTCTGATCTCCTGGGTGTCTTCACCTCCTCTGGTTCCTAAGTCGGCTGCTGCACCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000415869.6 ENST00000432908.2 ENST00000653788.1 ENST00000654010.1 ENST00000657249.1 ENST00000658228.1 ENST00000662346.1 ENST00000662552.1 ENST00000664894.1 ENST00000667386.1 |
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| CDS TCA 72 bp | CAGGGAGAGACAGGCGTTCGCCAAGTGCCAGCAAAGTaGCTGGATGAAAAATGGGCCACGTGCTGGGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: QGETGVRQVPAK*LDEKWATCWGR Trigger: GCGGCCCCAGCACGTGGCCCATTTTTCATCCAGTCACTTTGCTGGCACTTGGCGAACGCCTGTCTCTCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000432908.2 |
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| CDS CCA 72 bp | CCTCTCCTCCACTGTCTCACTGGGCTTGACTTCAAATaGCCAGTCCCTCCCCCAGCACAATACAGGGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: PLLHCLTGLDFK*PVPPPAQYRGA Trigger: GGCGCCCCTGTATTGTGCTGGGGGAGGGACTGGCCATTTGAAGTCAAGCCCAGTGAGACAGTGGAGGAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664894.1 |
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| CDS CCA 72 bp | AGAAGTGCCAACGGGAAGAAGGATGAGAGTTTGCTGTaGGTCCCGGGACAGAGCCCAGGGAGAGACAGGCGT | + |
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Preference number: 6 (lower is better) Translates to: RSANGKKDESLL*VPGQSPGRDRR Trigger: ACGCCTGTCTCTCCCTGGGCTCTGTCCCGGGACCCACAGCAAACTCTCATCCTTCTTCCCGTTGGCACTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432908.2 |
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| CDS CCA 72 bp | CCTCCACTGTCTCACTGGGCTTCACTTGACTTCAAATaGCCAGTCCCTCCCCCAGCACAATACAGGGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: PPLSHWASLDFK*PVPPPAQYRGA Trigger: GGCGCCCCTGTATTGTGCTGGGGGAGGGACTGGCCATTTGAAGTCAAGTGAAGCCCAGTGAGACAGTGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000653788.1 ENST00000662552.1 |
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| CDS TCA 72 bp | ACTTGGGAGCTGAAGAAGTGCCAACGGGAAGAAGGATaGGAGTTTGCTGTGGGTCCCGGGACAGAGCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: TWELKKCQREEG*EFAVGPGTEPR Trigger: CCTGGGCTCTGTCCCGGGACCCACAGCAAACTCTCATCCTTCTTCCCGTTGGCACTTCTTCAGCTCCCAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432908.2 |
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| CDS TCA 72 bp | GACTCTCAGGTTTTAAGTAGGTCTTCCGCACCTCCCTaGGTCTCGACGAGCTCCTGGGCATCATGGGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: DSQVLSRSSAPP*VSTSSWASWAH Trigger: GTGGGCCCATGATGCCCAGGAGCTCGTCGAGACTCAGGGAGGTGCGGAAGACCTACTTAAAACCTGAGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657249.1 ENST00000662552.1 ENST00000664894.1 |
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| CDS GCA 72 bp | GGGACAGAGCCCAGGGAGAGACAGGCGTTCGCCAAGTaGCAGCAAAGTGACTGGATGAAAAATGGGCCACGT | + |
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Preference number: 6 (lower is better) Translates to: GTEPRERQAFAK*QQSDWMKNGPR Trigger: ACGTGGCCCATTTTTCATCCAGTCACTTTGCTGGCACTTGGCGAACGCCTGTCTCTCCCTGGGCTCTGTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000432908.2 |
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| CDS GCA 72 bp | GCTGAAGAAGTGCCAACGGGAAGAAGGATGAGAGTTTaGTGTGGGTCCCGGGACAGAGCCCAGGGAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: AEEVPTGRRMRV*CGSRDRAQGET Trigger: TGTCTCTCCCTGGGCTCTGTCCCGGGACCCACAGCAAACTCTCATCCTTCTTCCCGTTGGCACTTCTTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432908.2 |
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| CDS TCA 72 bp | GAGGTGCCAAGGAAATATGGCTCAGCCGCATCTCCATaGGGAGGAGTAAGTCCATGCTTCTGCCCACAGGGG | + |
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Preference number: 6 (lower is better) Translates to: EVPRKYGSAASP*GGVSPCFCPQG Trigger: CCCCTGTGGGCAGAAGCATGGACTTACTCCTCCTCATGGAGATGCGGCTGAGCCATATTTCCTTGGCACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000415869.6 ENST00000432908.2 ENST00000653788.1 ENST00000654010.1 ENST00000657249.1 ENST00000658228.1 ENST00000662346.1 ENST00000662552.1 ENST00000664894.1 ENST00000666638.1 ENST00000667386.1 |
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| CDS TCA 72 bp | TGGCATGACCCCTCTCCTCCACTGTCTCACTGGGCTTaGCTTCAAATGGCCAGTCCCTCCCCCAGCACAATA | + |
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Preference number: 6 (lower is better) Translates to: WHDPSPPLSHWA*LQMASPSPSTI Trigger: TATTGTGCTGGGGGAGGGACTGGCCATTTGAAGTCAAGCCCAGTGAGACAGTGGAGGAGAGGGGTCATGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664894.1 |
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| CDS GCA 72 bp | GAGCTGTCACTTCCTCTTCCAGGAGAGTTTGATGGGTaGTGGTGCAGCAGCCGACTTAGGAACCAGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: ELSLPLPGEFDG*WCSSRLRNQRR Trigger: CCTCCTCTGGTTCCTAAGTCGGCTGCTGCACCAGCACCCATCAAACTCTCCTGGAAGAGGAAGTGACAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000415869.6 ENST00000432908.2 ENST00000653788.1 ENST00000654010.1 ENST00000657249.1 ENST00000658228.1 ENST00000662346.1 ENST00000662552.1 ENST00000664894.1 ENST00000666638.1 ENST00000667386.1 |
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| CDS TCA 72 bp | CTAGCTCCTGTGCGCTGCAGAAGACTCGGGCTGATCTaGAAGCGCCTCTCCTATTCGAGACTCTCAGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LAPVRCRRLGLI*KRLSYSRLSGF Trigger: AAAACCTGAGAGTCTCGAATAGGAGAGGCGCTTTCAGATCAGCCCGAGTCTTCTGCAGCGCACAGGAGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000415869.6 ENST00000432908.2 ENST00000653788.1 ENST00000654010.1 ENST00000657249.1 ENST00000658228.1 ENST00000662346.1 ENST00000662552.1 ENST00000664894.1 ENST00000667386.1 |
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| CDS GCA 72 bp | TGTCTCCTCACACACAGGCGTACATGCACACACATATaGACACACACACACAAGTGCTTGGCCCACTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: CLLTHRRTCTHI*THTHKCLAHSA Trigger: GGCTGAGTGGGCCAAGCACTTGTGTGTGTGTGTGCATATGTGTGTGCATGTACGCCTGTGTGTGAGGAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654010.1 |
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| CDS CCA 72 bp | AATGCTCTGTATGAATGGCATAGCGAGGAACTGCAGTaGCATGACCCCTCTCCTCCACTGTCTCACTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: NALYEWHSEELQ*HDPSPPLSHWA Trigger: AGCCCAGTGAGACAGTGGAGGAGAGGGGTCATGCCACTGCAGTTCCTCGCTATGCCATTCATACAGAGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000653788.1 ENST00000657249.1 ENST00000662346.1 ENST00000662552.1 ENST00000664894.1 |
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| CDS GCA 72 bp | TGGAGAATGCTCTGTATGAATGGCATAGCGAGGAACTaGAGTGGCATGACCCCTCTCCTCCACTGTCTCACT | + |
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Preference number: 6 (lower is better) Translates to: WRMLCMNGIARN*SGMTPLLHCLT Trigger: AGTGAGACAGTGGAGGAGAGGGGTCATGCCACTGCAGTTCCTCGCTATGCCATTCATACAGAGCATTCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000653788.1 ENST00000657249.1 ENST00000662346.1 ENST00000662552.1 ENST00000664894.1 |
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| CDS CAA 90 bp | CACAGGTCCATGTTCACATACAGATCCACATTCACACACACACAGTaGCACACTCACACACAGGCCCACACTCACACACACAGGTCCACA | + |
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Preference number: 6 (lower is better) Translates to: HRSMFTYRSTFTHTQ*HTHTQAHTHTHRST Trigger: TGTGGACCTGTGTGTGTGAGTGTGGGCCTGTGTGTGAGTGTGCAACTGTGTGTGTGTGAATGTGGATCTGTATGTGAACATGGACCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667386.1 |
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| CDS TCA 72 bp | AGGTCTTCCGCACCTTTGGCTTATGATGAGGCTGAATaGAAGGGCAGGGAGCTATGGATCATCCTTGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: RSSAPLAYDEAE*KGRELWIILAL Trigger: GAGAGCAAGGATGATCCATAGCTCCCTGCCCTTTCATTCAGCCTCATCATAAGCCAAAGGTGCGGAAGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653788.1 ENST00000662346.1 |
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| CDS GCA 72 bp | TCGTTCCTTCTCGTGTCATTTTCAATGGATCTGTTTTaGTCCCTGAGTCTCGACGAGCTCCTGGGCATCATG | + |
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Preference number: 6 (lower is better) Translates to: SFLLVSFSMDLF*SLSLDELLGIM Trigger: CATGATGCCCAGGAGCTCGTCGAGACTCAGGGAGCAAAACAGATCCATTGAAAATGACACGAGAAGGAACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653788.1 ENST00000662346.1 |
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| CDS CCA 72 bp | CCTCTGAGAGGTTCTGAGGACAGGAGCAAGAGACTTTaGTGTTATTTGGTGTTGTTGGTCCTGACAGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: PLRGSEDRSKRL*CYLVLLVLTVR Trigger: CCTGACTGTCAGGACCAACAACACCAAATAACACCAAAGTCTCTTGCTCCTGTCCTCAGAACCTCTCAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000415869.6 ENST00000432908.2 ENST00000653788.1 ENST00000654010.1 ENST00000658228.1 ENST00000662346.1 ENST00000662552.1 ENST00000664894.1 ENST00000666638.1 ENST00000667386.1 |
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| CDS CAA 72 bp | CTCGTTCCTTCTCGTGTCATTTTCAATGGATCTGTTTaGCTCCCTGAGTCTCGACGAGCTCCTGGGCATCAT | + |
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Preference number: 6 (lower is better) Translates to: LVPSRVIFNGSV*LPESRRAPGHH Trigger: ATGATGCCCAGGAGCTCGTCGAGACTCAGGGAGCAAAACAGATCCATTGAAAATGACACGAGAAGGAACGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653788.1 ENST00000662346.1 |
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| CDS CAA 90 bp | CAGCTGGAGCATATCCAGGGGAGAGAAACTACAAGGAAGAAGGGTTaGGAAACTGCATCCAGTGAAGCATGGATGGAAAACCCAGGGATT | + |
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Preference number: 6 (lower is better) Translates to: QLEHIQGRETTRKKG*ETASSEAWMENPGI Trigger: AATCCCTGGGTTTTCCATCCATGCTTCACTGGATGCAGTTTCCAAACCCTTCTTCCTTGTAGTTTCTCTCCCCTGGATATGCTCCAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432908.2 |
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| CDS GCA 72 bp | GAGGTGCCCAGAACAAGTGTAAGGGCCTCAGTGAGCTaGAAGTTAACGTTTTGTTGCTTTCCAAGTCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: EVPRTSVRASVS*KLTFCCFPSLL Trigger: AAGCAGACTTGGAAAGCAACAAAACGTTAACTTGCAGCTCACTGAGGCCCTTACACTTGTTCTGGGCACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000415869.6 ENST00000432908.2 ENST00000653788.1 ENST00000654010.1 ENST00000657249.1 ENST00000658228.1 ENST00000662346.1 ENST00000662552.1 ENST00000664894.1 ENST00000666638.1 ENST00000667386.1 |
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| CDS GCA 72 bp | TACACATCTGTGTGTCTCCTCACACACAGGCGTACATaGACACACATATGCACACACACACACAAGTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: YTSVCLLTHRRT*THICTHTHKCL Trigger: CAAGCACTTGTGTGTGTGTGTGCATATGTGTGTGCATGTACGCCTGTGTGTGAGGAGACACACAGATGTGTA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654010.1 |
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| CDS CAA 72 bp | AGGCTGAATGAAAGGGCAGGGAGCTATGGATCATCCTaGCTCTCTCGTTCCTTCTCGTGTCATTTTCAATGG | + |
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Preference number: 6 (lower is better) Translates to: RLNERAGSYGSS*LSRSFSCHFQW Trigger: CCATTGAAAATGACACGAGAAGGAACGAGAGAGCAAGGATGATCCATAGCTCCCTGCCCTTTCATTCAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653788.1 ENST00000662346.1 |
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| CDS TCA 72 bp | AGTCAAGTTCATCAGCAAAAGTGTTCAAGAAATTCTTaGAATGGGCCCTGGGCAGCTGGAGCATATCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SQVHQQKCSRNS*NGPWAAGAYPG Trigger: CCCTGGATATGCTCCAGCTGCCCAGGGCCCATTTCAAGAATTTCTTGAACACTTTTGCTGATGAACTTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432908.2 |
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| CDS CCA 72 bp | AGAAGGGTTTGGAAACTGCATCCAGTGAAGCATGGATaGAAAACCCAGGGATTTGCCTGGAGAAGAGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: RRVWKLHPVKHG*KTQGFAWRREN Trigger: GTTTTCTCTTCTCCAGGCAAATCCCTGGGTTTTCCATCCATGCTTCACTGGATGCAGTTTCCAAACCCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432908.2 |
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| CDS CCA 72 bp | ATATCCAGGGGAGAGAAACTACAAGGAAGAAGGGTTTaGAAACTGCATCCAGTGAAGCATGGATGGAAAACC | + |
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Preference number: 6 (lower is better) Translates to: ISRGEKLQGRRV*KLHPVKHGWKT Trigger: GGTTTTCCATCCATGCTTCACTGGATGCAGTTTCCAAACCCTTCTTCCTTGTAGTTTCTCTCCCCTGGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432908.2 |
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| CDS CAA 72 bp | AAGTCAAGTTCATCAGCAAAAGTGTTCAAGAAATTCTaGAAATGGGCCCTGGGCAGCTGGAGCATATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: KSSSSAKVFKKF*KWALGSWSISR Trigger: CCTGGATATGCTCCAGCTGCCCAGGGCCCATTTCAAGAATTTCTTGAACACTTTTGCTGATGAACTTGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432908.2 |
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| CDS GCA 72 bp | TTCACACACAAGATCCACACTCACACACACAGGTCCTaGATCTCGCTGAATTTAATTAAGGATCAACCTGAA | + |
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Preference number: 6 (lower is better) Translates to: FTHKIHTHTHRS*ISLNLIKDQPE Trigger: TTCAGGTTGATCCTTAATTAAATTCAGCGAGATGCAGGACCTGTGTGTGTGAGTGTGGATCTTGTGTGTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667386.1 |
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| CDS CCA 72 bp | ACGCATTCCCACACTTCTTGTCCACTCATAAAGCAATaGATAAGAGAGACGGATATGCACAAATCTACTAAC | + |
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Preference number: 6 (lower is better) Translates to: THSHTSCPLIKQ*IRETDMHKSTN Trigger: GTTAGTAGATTTGTGCATATCCGTCTCTCTTATCCATTGCTTTATGAGTGGACAAGAAGTGTGGGAATGCGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654010.1 |
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| CDS CAA 90 bp | AGTCATTCTGTGACTACAGGAAGTGATTATAAATCAATGCCACAGTaGCTAACAGACGGCATTCCTCTCTTTATACACATCTGTGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SHSVTTGSDYKSMPQ*LTDGIPLFIHICVS Trigger: AGACACACAGATGTGTATAAAGAGAGGAATGCCGTCTGTTAGCAACTGTGGCATTGATTTATAATCACTTCCTGTAGTCACAGAATGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654010.1 |
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| CDS CAA 72 bp | GTGACTACAGGAAGTGATTATAAATCAATGCCACAGTaGCTAACAGACGGCATTCCTCTCTTTATACACATC | + |
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Preference number: 6 (lower is better) Translates to: VTTGSDYKSMPQ*LTDGIPLFIHI Trigger: GATGTGTATAAAGAGAGGAATGCCGTCTGTTAGCAACTGTGGCATTGATTTATAATCACTTCCTGTAGTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654010.1 |
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| CDS GCA 72 bp | CCACTCCATTATGACATACACAAACATATTGTAAGCTaGTGTTACTATGCTGGGTTGAGAATTATTCATCTT | + |
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Preference number: 6 (lower is better) Translates to: PLHYDIHKHIVS*CYYAGLRIIHL Trigger: AAGATGAATAATTCTCAACCCAGCATAGTAACAGCAGCTTACAATATGTTTGTGTATGTCATAATGGAGTGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667386.1 |
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