Pregenerated sensors for LINC02031 (Homo sapiens)

Ensembl gene IDs: ENSG00000238837

Ensembl transcript IDs: ENST00000492416.2

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TCCTTGCGCGTGCATGACTCAAAGTCTTCCAGGGAGAGAAATGACTaGCCTGGGCGGTGGTTAAGCAGAATGGAGGGCACCTCCTTGGTC	+
Preference number: 5 (lower is better) Translates to: SLRVHDSKSSRERND*PGRWLSRMEGTSLV Trigger: GACCAAGGAGGTGCCCTCCATTCTGCTTAACCACCGCCCAGGCCAGTCATTTCTCTCCCTGGAAGACTTTGAGTCATGCACGCGCAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492416.2
CDS GCA 90 bp	TTTTGTTGCAGCCTTGTTTTGTATTGCACTGCTCATAATCCTCTTTaGTACTCTTGTCCTTTATTCGGCTGTGTGGCAGTGGCTCACGTC	+
Preference number: 5 (lower is better) Translates to: FCCSLVLYCTAHNPL*YSCPLFGCVAVAHV Trigger: GACGTGAGCCACTGCCACACAGCCGAATAAAGGACAAGAGTAGCAAAGAGGATTATGAGCAGTGCAATACAAAACAAGGCTGCAACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492416.2
CDS CCA 72 bp	CAGTTGAGTCAGGGACAGGGGGAGGCCATCTCTTCCTaGGTCCACCCTCTTCTAGCCCGTGGAGCTCTTTTC	+
Preference number: 6 (lower is better) Translates to: QLSQGQGEAISS*VHPLLARGALF Trigger: GAAAAGAGCTCCACGGGCTAGAAGAGGGTGGACCCAGGAAGAGATGGCCTCCCCCTGTCCCTGACTCAACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492416.2
CDS CCA 72 bp	AAGTCTTCCAGGGAGAGAAATGACTGGCCTGGGCGGTaGTTAAGCAGAATGGAGGGCACCTCCTTGGTCAGT	+
Preference number: 6 (lower is better) Translates to: KSSRERNDWPGR*LSRMEGTSLVS Trigger: ACTGACCAAGGAGGTGCCCTCCATTCTGCTTAACCACCGCCCAGGCCAGTCATTTCTCTCCCTGGAAGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492416.2
CDS CCA 72 bp	GTGCATGACTCAAAGTCTTCCAGGGAGAGAAATGACTaGCCTGGGCGGTGGTTAAGCAGAATGGAGGGCACC	+
Preference number: 6 (lower is better) Translates to: VHDSKSSRERND*PGRWLSRMEGT Trigger: GGTGCCCTCCATTCTGCTTAACCACCGCCCAGGCCAGTCATTTCTCTCCCTGGAAGACTTTGAGTCATGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492416.2
CDS TCA 72 bp	AGTGTTCTCCTCCTACTCCTTCAAAGCAGAGTGAACTaGGCTCCAGTTGAGTCAGGGACAGGGGGAGGCCAT	+
Preference number: 6 (lower is better) Translates to: SVLLLLLQSRVN*APVESGTGGGH Trigger: ATGGCCTCCCCCTGTCCCTGACTCAACTGGAGCTCAGTTCACTCTGCTTTGAAGGAGTAGGAGGAGAACACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492416.2
CDS GCA 72 bp	AGCCTTGTTTTGTATTGCACTGCTCATAATCCTCTTTaGTACTCTTGTCCTTTATTCGGCTGTGTGGCAGTG	+
Preference number: 6 (lower is better) Translates to: SLVLYCTAHNPL*YSCPLFGCVAV Trigger: CACTGCCACACAGCCGAATAAAGGACAAGAGTAGCAAAGAGGATTATGAGCAGTGCAATACAAAACAAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492416.2
CDS TCA 72 bp	TCTCTTTTTGAATTTCAGCCTTTAACCCATAATGATTaGGTGCTTATGCTGTGGTGCAGGAATACAATGGTG	+
Preference number: 6 (lower is better) Translates to: SLFEFQPLTHND*VLMLWCRNTMV Trigger: CACCATTGTATTCCTGCACCACAGCATAAGCACTCAATCATTATGGGTTAAAGGCTGAAATTCAAAAAGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492416.2

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