Pregenerated sensors for LINC02029 (Homo sapiens)
Ensembl gene IDs: ENSG00000241544Ensembl transcript IDs: ENST00000469196.2, ENST00000653334.1, ENST00000654643.1, ENST00000657118.1, ENST00000657628.1, ENST00000658205.1, ENST00000659992.1, ENST00000660101.1, ENST00000660509.1, ENST00000661446.1, ENST00000662247.1, ENST00000662778.1, ENST00000665035.1, ENST00000668918.1
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TTCCCGGGAAAGGTGTACCTCGTGGGGGCACTGCTCAAGGGAAGGTaGCCACAAGTTGGGGATCAAGGGAGGCACAGGTTGATCAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: FPGKVYLVGALLKGR*PQVGDQGRHRLIKA Trigger: GGCTTTGATCAACCTGTGCCTCCCTTGATCCCCAACTTGTGGGCACCTTCCCTTGAGCAGTGCCCCCACGAGGTACACCTTTCCCGGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS GCA 90 bp | AGGCACTGCCCTTGTCCCCAGGAAGCTCGCCAGTGCATGGGACTGTaGAGGTGTCTTCACCTCTGCATTAGGCATTCGATGTCAGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: RHCPCPQEARQCMGL*RCLHLCIRHSMSGH Trigger: ATGGCCTGACATCGAATGCCTAATGCAGAGGTGAAGACACCTGCACAGTCCCATGCACTGGCGAGCTTCCTGGGGACAAGGGCAGTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654643.1 |
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| CDS TCA 90 bp | GGGCCTGCAGAGAGCCAAGAGGGAGGCGTGCTCGGGGTAGGGCTGTaGGCTGTATGGGGAATTCTTGCTGACATCAAATCGTTTCAGATC | + |
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Preference number: 5 (lower is better) Translates to: GPAESQEGGVLGVGL*AVWGILADIKSFQI Trigger: GATCTGAAACGATTTGATGTCAGCAAGAATTCCCCATACAGCTCACAGCCCTACCCCGAGCACGCCTCCCTCTTGGCTCTCTGCAGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000469196.2 ENST00000659992.1 ENST00000660101.1 ENST00000665035.1 |
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| CDS GCA 90 bp | GAAGAGCATTGGCAAGAGCTGAGCGCTGCCACAGCAGGAACATCATaGCGATCGTCATCTAAGGGAGCTCATGGTGCTGTCTGCCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: EEHWQELSAATAGTS*RSSSKGAHGAVCLL Trigger: GAGGAGGCAGACAGCACCATGAGCTCCCTTAGATGACGATCGGCATGATGTTCCTGCTGTGGCAGCGCTCAGCTCTTGCCAATGCTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS CCA 90 bp | AGAGCCTCGATTCTCCAGGAAATTGACTTTGCCGGAGAACAAGGCTaGGGAAGGCAGGCTGTCCTAGGGGAGGAGTCGTATTTCAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: RASILQEIDFAGEQG*GRQAVLGEESYFSP Trigger: GGGGCTGAAATACGACTCCTCCCCTAGGACAGCCTGCCTTCCCCAGCCTTGTTCTCCGGCAAAGTCAATTTCCTGGAGAATCGAGGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS CCA 90 bp | GGTGATCAAGGCACTGCCCTTGTCCCCAGGAAGCTCGCCAGTGCATaGGACTGTGCAGGTGTCTTCACCTCTGCATTAGGCATTCGATGT | + |
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Preference number: 5 (lower is better) Translates to: GDQGTALVPRKLASA*DCAGVFTSALGIRC Trigger: ACATCGAATGCCTAATGCAGAGGTGAAGACACCTGCACAGTCCCATGCACTGGCGAGCTTCCTGGGGACAAGGGCAGTGCCTTGATCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654643.1 |
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| CDS CCA 90 bp | GACACTGTCACGTGGCAATCAATGACAGATGAACTGTCCCTTCCCTaGGCCACAAGCTCTTCAAGGCGGGAGCCTCAGCCCAGTTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: DTVTWQSMTDELSLP*ATSSSRREPQPSFF Trigger: GAAGAAACTGGGCTGAGGCTCCCGCCTTGAAGAGCTTGTGGCCCAGGGAAGGGACAGTTCATCTGTCATTGATTGCCACGTGACAGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS TCA 90 bp | TCAAGGGAAGGTGCCCACAAGTTGGGGATCAAGGGAGGCACAGGTTaGTCAAAGCCCCTGGAATTGAAATGGAGGTGTTCATCCTGCGGA | + |
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Preference number: 5 (lower is better) Translates to: SREGAHKLGIKGGTG*SKPLELKWRCSSCG Trigger: TCCGCAGGATGAACACCTCCATTTCAATTCCAGGGGCTTTGATCAACCTGTGCCTCCCTTGATCCCCAACTTGTGGGCACCTTCCCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS TCA 90 bp | TGCAGAGAGCATACCCAAGAGGGAGGCGTGCTCGGGGTAGGGCTGTaGGCTGTATGGGGAATTCTTGCTGACATCAAATCGTTTCAGATC | + |
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Preference number: 5 (lower is better) Translates to: CREHTQEGGVLGVGL*AVWGILADIKSFQI Trigger: GATCTGAAACGATTTGATGTCAGCAAGAATTCCCCATACAGCTCACAGCCCTACCCCGAGCACGCCTCCCTCTTGGGTATGCTCTCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000653334.1 ENST00000657628.1 ENST00000660509.1 ENST00000661446.1 ENST00000662778.1 ENST00000668918.1 |
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| CDS GCA 90 bp | GGAAAAGGAGACACTGAGTCATCTGAACAAAGCGGTGACTGGCTTTaGCTGGCTCTGGCAAGGACTCGCAACAAAGCCAAAGCCTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: GKGDTESSEQSGDWL*LALARTRNKAKASS Trigger: GGAAGAGGCTTTGGCTTTGTTGCGAGTCCTTGCCAGAGCCAGGCAAAGCCAGTCACCGCTTTGTTCAGATGACTCAGTGTCTCCTTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658205.1 ENST00000659992.1 ENST00000662778.1 |
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| CDS CCA 90 bp | AAGGAGACACTGAGTCATCTGAACAAAGCGGTGACTGGCTTTGCCTaGCTCTGGCAAGGACTCGCAACAAAGCCAAAGCCTCTTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: KETLSHLNKAVTGFA*LWQGLATKPKPLPP Trigger: TGGAGGAAGAGGCTTTGGCTTTGTTGCGAGTCCTTGCCAGAGCCAGGCAAAGCCAGTCACCGCTTTGTTCAGATGACTCAGTGTCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658205.1 ENST00000659992.1 ENST00000662778.1 |
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| CDS TCA 90 bp | GACAACCATTCATCCAACAAACATTTACTGCACGAGGAAGAGAGGTaGTCAAGGCACTGCCCTTGTCCCCAGGAAGCTCGCCAGTGCATG | + |
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Preference number: 5 (lower is better) Translates to: DNHSSNKHLLHEEER*SRHCPCPQEARQCM Trigger: CATGCACTGGCGAGCTTCCTGGGGACAAGGGCAGTGCCTTGATCACCTCTCTTCCTCGTGCAGTAAATGTTTGTTGGATGAATGGTTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654643.1 |
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| CDS GCA 90 bp | GGAACATCATGCCGATCGTCATCTAAGGGAGCTCATGGTGCTGTCTaGCTCCTCTTAGCAACATCCACACAGGCTGGTACAGTCAGATCA | + |
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Preference number: 5 (lower is better) Translates to: GTSCRSSSKGAHGAV*LLLATSTQAGTVRS Trigger: TGATCTGACTGTACCAGCCTGTGTGGATGTTGCTAAGAGGAGGCAGACAGCACCATGAGCTCCCTTAGATGACGATCGGCATGATGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS CCA 90 bp | TGCGGCCTCATTTATTTACCTGAGTCATCTGAACAAAGCGGTGACTaGCTTTGCCTGGCTCTGGCAAGGACTCGCAACAAAGCCAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: CGLIYLPESSEQSGD*LCLALARTRNKAKA Trigger: GGCTTTGGCTTTGTTGCGAGTCCTTGCCAGAGCCAGGCAAAGCCAGTCACCGCTTTGTTCAGATGACTCAGGTAAATAAATGAGGCCGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS CCA 90 bp | AAGTCTGGAAAAGGAGACACTGAGTCATCTGAACAAAGCGGTGACTaGCTTTGCCTGGCTCTGGCAAGGACTCGCAACAAAGCCAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: KSGKGDTESSEQSGD*LCLALARTRNKAKA Trigger: GGCTTTGGCTTTGTTGCGAGTCCTTGCCAGAGCCAGGCAAAGCCAGTCACCGCTTTGTTCAGATGACTCAGTGTCTCCTTTTCCAGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658205.1 ENST00000659992.1 ENST00000662778.1 |
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| CDS CCA 90 bp | GCAGCACAGCACTGGCATCTTTTTAGCATCATAGACACTGTCACGTaGCAATCAATGACAGATGAACTGTCCCTTCCCTGGGCCACAAGC | + |
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Preference number: 5 (lower is better) Translates to: AAQHWHLFSIIDTVT*QSMTDELSLPWATS Trigger: GCTTGTGGCCCAGGGAAGGGACAGTTCATCTGTCATTGATTGCCACGTGACAGTGTCTATGATGCTAAAAAGATGCCAGTGCTGTGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS CCA 90 bp | TGCCGCCCTACCTTCCCACCGATCTCTACCCCCACAGGCAGCTTTTaGCTGAATCCATTTAATAATAACAGTGTGAGTGCCAAGTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: CRPTFPPISTPTGSF*LNPFNNNSVSAKWV Trigger: AACCCACTTGGCACTCACACTGTTATTATTAAATGGATTCAGCCAAAAGCTGCCTGTGGGGGTAGAGATCGGTGGGAAGGTAGGGCGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660509.1 |
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| CDS GCA 90 bp | CTCATTTATTTACCTGAGTCATCTGAACAAAGCGGTGACTGGCTTTaGCTGGCTCTGGCAAGGACTCGCAACAAAGCCAAAGCCTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: LIYLPESSEQSGDWL*LALARTRNKAKASS Trigger: GGAAGAGGCTTTGGCTTTGTTGCGAGTCCTTGCCAGAGCCAGGCAAAGCCAGTCACCGCTTTGTTCAGATGACTCAGGTAAATAAATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS GCA 90 bp | CTGACAGGACTAGAGTTGACAACCATTCATCCAACAAACATTTACTaGACGAGGAAGAGAGGTGATCAAGGCACTGCCCTTGTCCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: LTGLELTTIHPTNIY*TRKRGDQGTALVPR Trigger: CCTGGGGACAAGGGCAGTGCCTTGATCACCTCTCTTCCTCGTGCAGTAAATGTTTGTTGGATGAATGGTTGTCAACTCTAGTCCTGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654643.1 |
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| CDS CCA 90 bp | TTTATTTACCTGAGTCATCTGAACAAAGCGGTGACTGGCTTTGCCTaGCTCTGGCAAGGACTCGCAACAAAGCCAAAGCCTCTTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: FIYLSHLNKAVTGFA*LWQGLATKPKPLPP Trigger: TGGAGGAAGAGGCTTTGGCTTTGTTGCGAGTCCTTGCCAGAGCCAGGCAAAGCCAGTCACCGCTTTGTTCAGATGACTCAGGTAAATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS CCA 90 bp | AGCTCATGGTGCTGTCTGCCTCCTCTTAGCAACATCCACACAGGCTaGTACAGTCAGATCATTGTGACTTGGACAGGGATGAAAATACTC | + |
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Preference number: 5 (lower is better) Translates to: SSWCCLPPLSNIHTG*YSQIIVTWTGMKIL Trigger: GAGTATTTTCATCCCTGTCCAAGTCACAATGATCTGACTGTACCAGCCTGTGTGGATGTTGCTAAGAGGAGGCAGACAGCACCATGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS TCA 90 bp | AGGCGTGCTCGGGGTAGGGCTGTGAGCTGTATGGGGAATTCTTGCTaGCATCAAATCGTTTCAGATCACTCAATTTACTTTGATTTCGTT | + |
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Preference number: 5 (lower is better) Translates to: RRARGRAVSCMGNSC*HQIVSDHSIYFDFV Trigger: AACGAAATCAAAGTAAATTGAGTGATCTGAAACGATTTGATGTCAGCAAGAATTCCCCATACAGCTCACAGCCCTACCCCGAGCACGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000660509.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS GCA 90 bp | AAAACACAAGGGGCTTCTATAGTGGCAACATGTTCAGTAGCACAGTaGTGTATTGGTTCTTTACAGCTTGCAGGACCCAAAGAAGGAATG | + |
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Preference number: 5 (lower is better) Translates to: KTQGASIVATCSVAQ*CIGSLQLAGPKEGM Trigger: CATTCCTTCTTTGGGTCCTGCAAGCTGTAAAGAACCAATACAGCACTGTGCTACTGAACATGTTGCCACTATAGAAGCCCCTTGTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS GCA 90 bp | AAAGAGGAGACTTTTTGCCAAAAATGCATTCTCGATCCCGGCGTGTaGCTGTGCACTGTTGAGTGTGACTTTGTTCTGTTAGGACTTAAA | + |
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Preference number: 5 (lower is better) Translates to: KEETFCQKCILDPGV*LCTVECDFVLLGLK Trigger: TTTAAGTCCTAACAGAACAAAGTCACACTCAACAGTGCACAGGCACACGCCGGGATCGAGAATGCATTTTTGGCAAAAAGTCTCCTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000657118.1 ENST00000658205.1 ENST00000662247.1 |
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| CDS GCA 72 bp | CCCAGCACATCCAGCCTGGCATCCCACACGCTGGGCTaGCTGACTCAGACAAAGCCAGGCCGCTCCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PSTSSLASHTLG*LTQTKPGRSSC Trigger: GCAGGAGGAGCGGCCTGGCTTTGTCTGAGTCAGGCAGCCCAGCGTGTGGGATGCCAGGCTGGATGTGCTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000657118.1 ENST00000661446.1 ENST00000668918.1 |
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| CDS TCA 72 bp | GCACATCCAGCCTGGCATCCCACACGCTGGGCTGCCTaGCTCAGACAAAGCCAGGCCGCTCCTCCTGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: AHPAWHPTRWAA*LRQSQAAPPAC Trigger: ACAGGCAGGAGGAGCGGCCTGGCTTTGTCTGAGTCAGGCAGCCCAGCGTGTGGGATGCCAGGCTGGATGTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653334.1 ENST00000661446.1 |
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| CDS GCA 72 bp | AAGGTGTACCTCGTGGGGGCACTGCTCAAGGGAAGGTaGCCACAAGTTGGGGATCAAGGGAGGCACAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: KVYLVGALLKGR*PQVGDQGRHRL Trigger: CAACCTGTGCCTCCCTTGATCCCCAACTTGTGGGCACCTTCCCTTGAGCAGTGCCCCCACGAGGTACACCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS CCA 72 bp | CCTGCTCAGGAAACATGGAATGGCTTCTGCAAGGTTTaGGCCTGCAGAGAGCCAAGAGGGAGGCGTGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: PAQETWNGFCKV*ACREPRGRRAR Trigger: CCGAGCACGCCTCCCTCTTGGCTCTCTGCAGGCCCAAACCTTGCAGAAGCCATTCCATGTTTCCTGAGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000469196.2 ENST00000659992.1 ENST00000660101.1 ENST00000665035.1 |
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| CDS CCA 72 bp | ACGTGGCAATCAATGACAGATGAACTGTCCCTTCCCTaGGCCACAAGCTCTTCAAGGCGGGAGCCTCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: TWQSMTDELSLP*ATSSSRREPQP Trigger: GGGCTGAGGCTCCCGCCTTGAAGAGCTTGTGGCCCAGGGAAGGGACAGTTCATCTGTCATTGATTGCCACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS GCA 72 bp | TTTGTTTCCCGGGAAAGGTGTACCTCGTGGGGGCACTaGTCAAGGGAAGGTGCCCACAAGTTGGGGATCAAG | + |
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Preference number: 6 (lower is better) Translates to: FVSRERCTSWGH*SREGAHKLGIK Trigger: CTTGATCCCCAACTTGTGGGCACCTTCCCTTGAGCAGTGCCCCCACGAGGTACACCTTTCCCGGGAAACAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS GCA 72 bp | CCTTGTCCCCAGGAAGCTCGCCAGTGCATGGGACTGTaGAGGTGTCTTCACCTCTGCATTAGGCATTCGATG | + |
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Preference number: 6 (lower is better) Translates to: PCPQEARQCMGL*RCLHLCIRHSM Trigger: CATCGAATGCCTAATGCAGAGGTGAAGACACCTGCACAGTCCCATGCACTGGCGAGCTTCCTGGGGACAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654643.1 |
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| CDS TCA 72 bp | CATACCCAAGAGGGAGGCGTGCTCGGGGTAGGGCTGTaGGCTGTATGGGGAATTCTTGCTGACATCAAATCG | + |
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Preference number: 6 (lower is better) Translates to: HTQEGGVLGVGL*AVWGILADIKS Trigger: CGATTTGATGTCAGCAAGAATTCCCCATACAGCTCACAGCCCTACCCCGAGCACGCCTCCCTCTTGGGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000653334.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000660509.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000668918.1 |
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| CDS CAA 90 bp | CTCAAGGGAAGGTGCCCACAAGTTGGGGATCAAGGGAGGCACAGGTaGATCAAAGCCCCTGGAATTGAAATGGAGGTGTTCATCCTGCGG | + |
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Preference number: 6 (lower is better) Translates to: LKGRCPQVGDQGRHR*IKAPGIEMEVFILR Trigger: CCGCAGGATGAACACCTCCATTTCAATTCCAGGGGCTTTGATCAACCTGTGCCTCCCTTGATCCCCAACTTGTGGGCACCTTCCCTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS GCA 72 bp | TCAAAGCCCCTGGAATTGAAATGGAGGTGTTCATCCTaGGGAGGCTCCGAACATCTGAGGCAGAGCCTCGAT | + |
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Preference number: 6 (lower is better) Translates to: SKPLELKWRCSS*GGSEHLRQSLD Trigger: ATCGAGGCTCTGCCTCAGATGTTCGGAGCCTCCGCAGGATGAACACCTCCATTTCAATTCCAGGGGCTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS GCA 72 bp | TGCCGATCGTCATCTAAGGGAGCTCATGGTGCTGTCTaGCTCCTCTTAGCAACATCCACACAGGCTGGTACA | + |
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Preference number: 6 (lower is better) Translates to: CRSSSKGAHGAV*LLLATSTQAGT Trigger: TGTACCAGCCTGTGTGGATGTTGCTAAGAGGAGGCAGACAGCACCATGAGCTCCCTTAGATGACGATCGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS CCA 72 bp | GGAATGATTTTTGTTTCCCGGGAAAGGTGTACCTCGTaGGGGCACTGCTCAAGGGAAGGTGCCCACAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: GMIFVSRERCTS*GHCSREGAHKL Trigger: CAACTTGTGGGCACCTTCCCTTGAGCAGTGCCCCCACGAGGTACACCTTTCCCGGGAAACAAAAATCATTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS CCA 72 bp | CATCTGAACAAAGCGGTGACTGGCTTTGCCTGGCTCTaGCAAGGACTCGCAACAAAGCCAAAGCCTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: HLNKAVTGFAWL*QGLATKPKPLP Trigger: AGGAAGAGGCTTTGGCTTTGTTGCGAGTCCTTGCCAGAGCCAGGCAAAGCCAGTCACCGCTTTGTTCAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS CCA 72 bp | CTGAGTCATCTGAACAAAGCGGTGACTGGCTTTGCCTaGCTCTGGCAAGGACTCGCAACAAAGCCAAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: LSHLNKAVTGFA*LWQGLATKPKP Trigger: AGGCTTTGGCTTTGTTGCGAGTCCTTGCCAGAGCCAGGCAAAGCCAGTCACCGCTTTGTTCAGATGACTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS TCA 72 bp | TCATCCAACAAACATTTACTGCACGAGGAAGAGAGGTaGTCAAGGCACTGCCCTTGTCCCCAGGAAGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: SSNKHLLHEEER*SRHCPCPQEAR Trigger: GCGAGCTTCCTGGGGACAAGGGCAGTGCCTTGATCACCTCTCTTCCTCGTGCAGTAAATGTTTGTTGGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654643.1 |
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| CDS GCA 72 bp | GACACTGAGTCATCTGAACAAAGCGGTGACTGGCTTTaGCTGGCTCTGGCAAGGACTCGCAACAAAGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: DTESSEQSGDWL*LALARTRNKAK Trigger: TTTGGCTTTGTTGCGAGTCCTTGCCAGAGCCAGGCAAAGCCAGTCACCGCTTTGTTCAGATGACTCAGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658205.1 ENST00000659992.1 ENST00000662778.1 |
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| CDS CAA 90 bp | CACGCCTTGGTACTCTCAGTCCTTCCTCCCCTTGTGTGCAGTCTTTaGAAGTCCAAGGTTGTCGGTCTGAGTTTGTCTTTTCCTGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: HALVLSVLPPLVCSL*KSKVVGLSLSFPAQ Trigger: CTGAGCAGGAAAAGACAAACTCAGACCGACAACCTTGGACTTCAAAAGACTGCACACAAGGGGAGGAAGGACTGAGAGTACCAAGGCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000660509.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS TCA 72 bp | AATGGAGGTGTTCATCCTGCGGAGGCTCCGAACATCTaGGGCAGAGCCTCGATTCTCCAGGAAATTGACTTT | + |
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Preference number: 6 (lower is better) Translates to: NGGVHPAEAPNI*GRASILQEIDF Trigger: AAAGTCAATTTCCTGGAGAATCGAGGCTCTGCCTCAGATGTTCGGAGCCTCCGCAGGATGAACACCTCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS GCA 72 bp | TTACCTGAGTCATCTGAACAAAGCGGTGACTGGCTTTaGCTGGCTCTGGCAAGGACTCGCAACAAAGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: LPESSEQSGDWL*LALARTRNKAK Trigger: TTTGGCTTTGTTGCGAGTCCTTGCCAGAGCCAGGCAAAGCCAGTCACCGCTTTGTTCAGATGACTCAGGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS CCA 72 bp | TGCTGTCTGCCTCCTCTTAGCAACATCCACACAGGCTaGTACAGTCAGATCATTGTGACTTGGACAGGGATG | + |
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Preference number: 6 (lower is better) Translates to: CCLPPLSNIHTG*YSQIIVTWTGM Trigger: CATCCCTGTCCAAGTCACAATGATCTGACTGTACCAGCCTGTGTGGATGTTGCTAAGAGGAGGCAGACAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS CCA 72 bp | AAAGGAGACACTGAGTCATCTGAACAAAGCGGTGACTaGCTTTGCCTGGCTCTGGCAAGGACTCGCAACAAA | + |
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Preference number: 6 (lower is better) Translates to: KGDTESSEQSGD*LCLALARTRNK Trigger: TTTGTTGCGAGTCCTTGCCAGAGCCAGGCAAAGCCAGTCACCGCTTTGTTCAGATGACTCAGTGTCTCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658205.1 ENST00000659992.1 ENST00000662778.1 |
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| CDS TCA 72 bp | CATCATAGACACTGTCACGTGGCAATCAATGACAGATaGACTGTCCCTTCCCTGGGCCACAAGCTCTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: HHRHCHVAINDR*TVPSLGHKLFK Trigger: CTTGAAGAGCTTGTGGCCCAGGGAAGGGACAGTTCATCTGTCATTGATTGCCACGTGACAGTGTCTATGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS GCA 72 bp | GGGGCTTCTATAGTGGCAACATGTTCAGTAGCACAGTaGTGTATTGGTTCTTTACAGCTTGCAGGACCCAAA | + |
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Preference number: 6 (lower is better) Translates to: GASIVATCSVAQ*CIGSLQLAGPK Trigger: TTTGGGTCCTGCAAGCTGTAAAGAACCAATACAGCACTGTGCTACTGAACATGTTGCCACTATAGAAGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS CCA 72 bp | CACTGGCATCTTTTTAGCATCATAGACACTGTCACGTaGCAATCAATGACAGATGAACTGTCCCTTCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: HWHLFSIIDTVT*QSMTDELSLPW Trigger: CCAGGGAAGGGACAGTTCATCTGTCATTGATTGCCACGTGACAGTGTCTATGATGCTAAAAAGATGCCAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS CCA 72 bp | ATTTATTTACCTGAGTCATCTGAACAAAGCGGTGACTaGCTTTGCCTGGCTCTGGCAAGGACTCGCAACAAA | + |
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Preference number: 6 (lower is better) Translates to: IYLPESSEQSGD*LCLALARTRNK Trigger: TTTGTTGCGAGTCCTTGCCAGAGCCAGGCAAAGCCAGTCACCGCTTTGTTCAGATGACTCAGGTAAATAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS CAA 72 bp | GTACTCTCAGTCCTTCCTCCCCTTGTGTGCAGTCTTTaGAAGTCCAAGGTTGTCGGTCTGAGTTTGTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: VLSVLPPLVCSL*KSKVVGLSLSF Trigger: AAAAGACAAACTCAGACCGACAACCTTGGACTTCAAAAGACTGCACACAAGGGGAGGAAGGACTGAGAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000660509.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS CAA 90 bp | CCTAATTTCTGTTTCAGGGCTCAGGGAGGACTGACAGGACTAGAGTaGACAACCATTCATCCAACAAACATTTACTGCACGAGGAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: PNFCFRAQGGLTGLE*TTIHPTNIYCTRKR Trigger: TCTCTTCCTCGTGCAGTAAATGTTTGTTGGATGAATGGTTGTCAACTCTAGTCCTGTCAGTCCTCCCTGAGCCCTGAAACAGAAATTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654643.1 |
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| CDS GCA 72 bp | CTAGAGTTGACAACCATTCATCCAACAAACATTTACTaGACGAGGAAGAGAGGTGATCAAGGCACTGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: LELTTIHPTNIY*TRKRGDQGTAL Trigger: AAGGGCAGTGCCTTGATCACCTCTCTTCCTCGTGCAGTAAATGTTTGTTGGATGAATGGTTGTCAACTCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654643.1 |
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| CDS CAA 72 bp | CATCCACACAGGCTGGTACAGTCAGATCATTGTGACTaGGACAGGGATGAAAATACTCAGCTGACACCAATA | + |
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Preference number: 6 (lower is better) Translates to: HPHRLVQSDHCD*DRDENTQLTPI Trigger: TATTGGTGTCAGCTGAGTATTTTCATCCCTGTCCAAGTCACAATGATCTGACTGTACCAGCCTGTGTGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS TCA 72 bp | CGGGGTAGGGCTGTGAGCTGTATGGGGAATTCTTGCTaGCATCAAATCGTTTCAGATCACTCAATTTACTTT | + |
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Preference number: 6 (lower is better) Translates to: RGRAVSCMGNSC*HQIVSDHSIYF Trigger: AAAGTAAATTGAGTGATCTGAAACGATTTGATGTCAGCAAGAATTCCCCATACAGCTCACAGCCCTACCCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000660509.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS CCA 72 bp | TATAGTGGCAACATGTTCAGTAGCACAGTGCTGTATTaGTTCTTTACAGCTTGCAGGACCCAAAGAAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: YSGNMFSSTVLY*FFTACRTQRRN Trigger: ATTCCTTCTTTGGGTCCTGCAAGCTGTAAAGAACCAATACAGCACTGTGCTACTGAACATGTTGCCACTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000469196.2 ENST00000653334.1 ENST00000654643.1 ENST00000657118.1 ENST00000657628.1 ENST00000658205.1 ENST00000659992.1 ENST00000660101.1 ENST00000661446.1 ENST00000662247.1 ENST00000662778.1 ENST00000665035.1 ENST00000668918.1 |
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| CDS CAA 90 bp | GAAGAGGTTAGGTCTCTTTCACTCAGATTCATTTCTAACTTGCAGTaGGCGTGTGACCTTTTTCTTTATTCAATTTGGGGTCCTGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: EEVRSLSLRFISNLQ*ACDLFLYSIWGPEH Trigger: GTGCTCAGGACCCCAAATTGAATAAAGAAAAAGGTCACACGCCAACTGCAAGTTAGAAATGAATCTGAGTGAAAGAGACCTAACCTCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660509.1 |
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| CDS CAA 90 bp | GGTGATTGCTTTGAATTTTCACCTGATTTAGACCCACTGAAGCCATaGCCTGTGCTTTCTTGTCAGAATAAATTTGGAGCTGAACTCACC | + |
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Preference number: 6 (lower is better) Translates to: GDCFEFSPDLDPLKP*PVLSCQNKFGAELT Trigger: GGTGAGTTCAGCTCCAAATTTATTCTGACAAGAAAGCACAGGCAATGGCTTCAGTGGGTCTAAATCAGGTGAAAATTCAAAGCAATCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657118.1 ENST00000658205.1 ENST00000662247.1 |
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| CDS CAA 72 bp | TTTGAATTTTCACCTGATTTAGACCCACTGAAGCCATaGCCTGTGCTTTCTTGTCAGAATAAATTTGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: FEFSPDLDPLKP*PVLSCQNKFGA Trigger: AGCTCCAAATTTATTCTGACAAGAAAGCACAGGCAATGGCTTCAGTGGGTCTAAATCAGGTGAAAATTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657118.1 ENST00000658205.1 ENST00000662247.1 |
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