RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02028 (Homo sapiens)

Ensembl gene IDs: ENSG00000230102

Ensembl transcript IDs: ENST00000420947.3, ENST00000432154.5, ENST00000443776.6, ENST00000449350.6, ENST00000593326.6, ENST00000593559.6, ENST00000597775.1, ENST00000597974.5, ENST00000598535.6, ENST00000599153.1, ENST00000599441.5, ENST00000599735.3, ENST00000601524.5, ENST00000601913.2, ENST00000609015.6, ENST00000609304.5, ENST00000609933.3, ENST00000610423.4, ENST00000620876.4, ENST00000622169.5, ENST00000625586.1, ENST00000625668.3, ENST00000625879.2, ENST00000626476.3, ENST00000627894.1, ENST00000627909.2, ENST00000629693.1, ENST00000629795.2, ENST00000630262.2, ENST00000630484.2, ENST00000653573.1, ENST00000654490.1, ENST00000654593.1, ENST00000656099.1, ENST00000656867.1, ENST00000657966.1, ENST00000658493.1, ENST00000659267.1, ENST00000660052.1, ENST00000660199.1, ENST00000660282.1, ENST00000660359.1, ENST00000661206.1, ENST00000662513.1, ENST00000663517.1, ENST00000665355.1, ENST00000665835.1, ENST00000666539.1, ENST00000666958.1, ENST00000667864.1, ENST00000668599.1, ENST00000668675.1, ENST00000668727.1, ENST00000669236.1, ENST00000669285.1, ENST00000670206.1

Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GAAGGCCTCCTGGCAGAGGCGGCCTTTAAGCAGGATCCGGGAGAATaGGCAAACTGGGACTCGCAAGGAGAGAGACAGTGGGTTCCGCTG +
Preference number: 5 (lower is better)
Translates to: EGLLAEAAFKQDPGE*ANWDSQGERQWVPL
Trigger: CAGCGGAACCCACTGTCTCTCTCCTTGCGAGTCCCAGTTTGCCCATTCTCCCGGATCCTGCTTAAAGGCCGCCTCTGCCAGGAGGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS CCA 90 bp CTCAGGTCTGTAAGCCCAAGGCCTCACTGTGAGGACACCTGGCTCTaGGCAGGGCCTTCTGGGACCTCAAGGCTTTGCCTGGCCAGATCT +
Preference number: 5 (lower is better)
Translates to: LRSVSPRPHCEDTWL*AGPSGTSRLCLARS
Trigger: AGATCTGGCCAGGCAAAGCCTTGAGGTCCCAGAAGGCCCTGCCCAGAGCCAGGTGTCCTCACAGTGAGGCCTTGGGCTTACAGACCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669285.1
CDS GCA 90 bp CATAGCCAGCCCCTTGCTGCTGGCTCACCCTTGCCTCTGAAGCTGTaGCATACTGTTCCCTTCACCAGGCACGCCCTCCATGCTCCTATC +
Preference number: 5 (lower is better)
Translates to: HSQPLAAGSPLPLKL*HTVPFTRHALHAPI
Trigger: GATAGGAGCATGGAGGGCGTGCCTGGTGAAGGGAACAGTATGGCACAGCTTCAGAGGCAAGGGTGAGCCAGCAGCAAGGGGCTGGCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000432154.5
ENST00000593326.6
ENST00000626476.3
ENST00000654490.1
ENST00000658493.1
ENST00000663517.1
ENST00000667864.1
ENST00000668599.1
ENST00000670206.1
CDS GCA 90 bp ATTCCAGGGCCACTGTGGATGGGCTTTCCCCGCCCAGGAAATGACTaGTGCATTGATCTCTGTGCCACTCAGGCCAGGGCATCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: IPGPLWMGFPRPGND*CIDLCATQARASLW
Trigger: CCACAAGGATGCCCTGGCCTGAGTGGCACAGAGATCAATGCAGCAGTCATTTCCTGGGCGGGGAAAGCCCATCCACAGTGGCCCTGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000449350.6
ENST00000654593.1
ENST00000656099.1
ENST00000656867.1
ENST00000657966.1
ENST00000659267.1
ENST00000660199.1
ENST00000660282.1
ENST00000665355.1
ENST00000666958.1
ENST00000668599.1
ENST00000668675.1
ENST00000669236.1
CDS GCA 90 bp GTCACCCAACACGCGTTGGTGGCCGTGCCACAAAGAGGTCCTCCGTaGAGTGCTGCAGGCCATTCACTCCCTCCACAGCTTCATATTAGG +
Preference number: 5 (lower is better)
Translates to: VTQHALVAVPQRGPP*SAAGHSLPPQLHIR
Trigger: CCTAATATGAAGCTGTGGAGGGAGTGAATGGCCTGCAGCACTGCACGGAGGACCTCTTTGTGGCACGGCCACCAACGCGTGTTGGGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665835.1
CDS TCA 90 bp CAGAGCCTCTCAGGCACGCGGCATCTCTCCCCACCGGCAGCGCCTTaGAATACCAAAGGCCTAGCCAAAGATGGAACCGTTTTGTTGGGA +
Preference number: 5 (lower is better)
Translates to: QSLSGTRHLSPPAAP*NTKGLAKDGTVLLG
Trigger: TCCCAACAAAACGGTTCCATCTTTGGCTAGGCCTTTGGTATTTCAAGGCGCTGCCGGTGGGGAGAGATGCCGCGTGCCTGAGAGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000443776.6
ENST00000597974.5
ENST00000601913.2
ENST00000609015.6
ENST00000620876.4
ENST00000622169.5
ENST00000625586.1
ENST00000625879.2
ENST00000630262.2
ENST00000630484.2
ENST00000654593.1
ENST00000656867.1
ENST00000660052.1
ENST00000660359.1
ENST00000666958.1
ENST00000668727.1
ENST00000669285.1
CDS GCA 90 bp GTCCAGGGTCACAAACTAGGGGCTGATACCAACTTCACCACCCAGTaGAGGAGGGCTCTTCTTCTACTTCTGGGGTCCCGCCTCTGTGGT +
Preference number: 5 (lower is better)
Translates to: VQGHKLGADTNFTTQ*RRALLLLLGSRLCG
Trigger: ACCACAGAGGCGGGACCCCAGAAGTAGAAGAAGAGCCCTCCTGCACTGGGTGGTGAAGTTGGTATCAGCCCCTAGTTTGTGACCCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449350.6
ENST00000656099.1
ENST00000657966.1
CDS GCA 90 bp GCGGGTTCAGCACAGTCACATAGCTCTTCAGGAAGTTGTCTTCACTaGACAGAAACCAGCCGCCCCTCCTTGAGGTGCCTCAGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: AGSAQSHSSSGSCLH*TETSRPSLRCLRPA
Trigger: AGCTGGCCTGAGGCACCTCAAGGAGGGGCGGCTGGTTTCTGTGCAGTGAAGACAACTTCCTGAAGAGCTATGTGACTGTGCTGAACCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609933.3
CDS TCA 90 bp ATGGCACGCATCACAGGGTCTCAGATAGGGCGCAGCTCTCACAAATaGCAAGTTCTCTGCCTGGGAGGCATGCAGGCCTCTGTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: MARITGSQIGRSSHK*QVLCLGGMQASVKA
Trigger: TGCCTTCACAGAGGCCTGCATGCCTCCCAGGCAGAGAACTTGTCATTTGTGAGAGCTGCGCCCTATCTGAGACCCTGTGATGCGTGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665835.1
CDS CCA 90 bp GATCCGGGAGAATGGGCAAACTGGGACTCGCAAGGAGAGAGACAGTaGGTTCCGCTGGAGGCTAATGCTCTAACAAAGGCACAGTGGGGA +
Preference number: 5 (lower is better)
Translates to: DPGEWANWDSQGERQ*VPLEANALTKAQWG
Trigger: TCCCCACTGTGCCTTTGTTAGAGCATTAGCCTCCAGCGGAACCCACTGTCTCTCTCCTTGCGAGTCCCAGTTTGCCCATTCTCCCGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS CCA 90 bp CTCAGCCAAGCCAGGGCTGGATCCAGGGAAACTCATCACCATTCCTaGAAGAGGACATCCCAACAGCTGCCAGCATTAGCTCTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: LSQARAGSRETHHHS*KRTSQQLPALALSG
Trigger: CCCTGAGAGAGCTAATGCTGGCAGCTGTTGGGATGTCCTCTTCCAGGAATGGTGATGAGTTTCCCTGGATCCAGCCCTGGCTTGGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449350.6
CDS CCA 90 bp AATGACTTCACATGCCATTCTCCCCGCTGCCTGCCACTTGTACCTTaGGCAGCCACTGGGGACATTCCTGGTTCTGGATTCCTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: NDFTCHSPRCLPLVP*AATGDIPGSGFLPL
Trigger: CAGAGGCAGGAATCCAGAACCAGGAATGTCCCCAGTGGCTGCCCAAGGTACAAGTGGCAGGCAGCGGGGAGAATGGCATGTGAAGTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000449350.6
ENST00000654593.1
ENST00000656099.1
ENST00000656867.1
ENST00000657966.1
ENST00000659267.1
ENST00000660199.1
ENST00000660282.1
ENST00000661206.1
ENST00000665355.1
ENST00000666958.1
ENST00000668599.1
ENST00000668675.1
ENST00000668727.1
ENST00000669236.1
CDS GCA 90 bp GAGACTTGGAAACCAAGCTGGGGCCAGGTTACAAATGACTTCACATaGCATTCTCCCCGCTGCCTGCCACTTGTACCTTGGGCAGCCACT +
Preference number: 5 (lower is better)
Translates to: ETWKPSWGQVTNDFT*HSPRCLPLVPWAAT
Trigger: AGTGGCTGCCCAAGGTACAAGTGGCAGGCAGCGGGGAGAATGGCATGTGAAGTCATTTGTAACCTGGCCCCAGCTTGGTTTCCAAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000449350.6
ENST00000654593.1
ENST00000656099.1
ENST00000656867.1
ENST00000657966.1
ENST00000659267.1
ENST00000660199.1
ENST00000660282.1
ENST00000661206.1
ENST00000665355.1
ENST00000666958.1
ENST00000668599.1
ENST00000668675.1
ENST00000668727.1
ENST00000669236.1
CDS CCA 90 bp GTGAGAGGGAACCTTGGTAAAAATGGCCTGAGCAAGAGCAGGGAATaGGGGACTTCATCTCCAGCCCGCATCCTGAGAAGGAGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: VRGNLGKNGLSKSRE*GTSSPARILRRRKP
Trigger: AGGCTTCCTCCTTCTCAGGATGCGGGCTGGAGATGAAGTCCCCCATTCCCTGCTCTTGCTCAGGCCATTTTTACCAAGGTTCCCTCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669285.1
CDS TCA 90 bp GGGCTGGAGAGCAGAGAAATCTGTCCAGGGTCACAAACTAGGGGCTaGTACCAACTTCACCACCCAGTGCAGGAGGGCTCTTCTTCTACT +
Preference number: 5 (lower is better)
Translates to: GLESREICPGSQTRG*YQLHHPVQEGSSST
Trigger: AGTAGAAGAAGAGCCCTCCTGCACTGGGTGGTGAAGTTGGTATCAGCCCCTAGTTTGTGACCCTGGACAGATTTCTCTGCTCTCCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449350.6
ENST00000656099.1
ENST00000657966.1
CDS GCA 90 bp GGGGTCAGTGGACCTGGGGTCAGTCTACCAGGTGACAGGACCCTATaGATGACTGTTTCCATGTGGCATGACAGCTGCATGTGGAGATAT +
Preference number: 5 (lower is better)
Translates to: GVSGPGVSLPGDRTL*MTVSMWHDSCMWRY
Trigger: ATATCTCCACATGCAGCTGTCATGCCACATGGAAACAGTCATGCATAGGGTCCTGTCACCTGGTAGACTGACCCCAGGTCCACTGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000593326.6
ENST00000598535.6
ENST00000627894.1
ENST00000670206.1
CDS CCA 90 bp CTCAGCCAAGCCAGGGCTGGATCCAGGGAAACTCATCACCATTCCTaGAAGAGGACATCCCAACAGCTGCCAGCATTAGCTCTCATGTCT +
Preference number: 5 (lower is better)
Translates to: LSQARAGSRETHHHS*KRTSQQLPALALMS
Trigger: AGACATGAGAGCTAATGCTGGCAGCTGTTGGGATGTCCTCTTCCAGGAATGGTGATGAGTTTCCCTGGATCCAGCCCTGGCTTGGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000420947.3
ENST00000622169.5
ENST00000654593.1
ENST00000663517.1
ENST00000665835.1
ENST00000667864.1
ENST00000668727.1
ENST00000669236.1
ENST00000669285.1
CDS CCA 90 bp GTCTGGATGGCCACCATAACCCAAGTATTCAGCTGGCAGGTGGGCTaGTCTGAAGGGTCTGTGATGGCTTCACTCACATGTCAGGCACAT +
Preference number: 5 (lower is better)
Translates to: VWMATITQVFSWQVG*SEGSVMASLTCQAH
Trigger: ATGTGCCTGACATGTGAGTGAAGCCATCACAGACCCTTCAGACCAGCCCACCTGCCAGCTGAATACTTGGGTTATGGTGGCCATCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597775.1
CDS TCA 90 bp ACTGAATCAGAGACCAGACTAGATCTGAGGTGCTTTTCAGAACCCTaGAGTTGCCCCAGTGGGTCCAAGAAGGCCACGTGGTGGACAAGC +
Preference number: 5 (lower is better)
Translates to: TESETRLDLRCFSEP*SCPSGSKKATWWTS
Trigger: GCTTGTCCACCACGTGGCCTTCTTGGACCCACTGGGGCAACTTCAGGGTTCTGAAAAGCACCTCAGATCTAGTCTGGTCTCTGATTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS TCA 90 bp AGCAATCCCCTCTGTCCATCCATGGATGCAGGGTCCTTTACCAGATaGCAAGGAAAGTGGTGGACCCTAGAAGGGAGAGGGAAGGGACTT +
Preference number: 5 (lower is better)
Translates to: SNPLCPSMDAGSFTR*QGKWWTLEGRGKGL
Trigger: AAGTCCCTTCCCTCTCCCTTCTAGGGTCCACCACTTTCCTTGTCATCTGGTAAAGGACCCTGCATCCATGGATGGACAGAGGGGATTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS GCA 90 bp GGTCAACAGGTGTTAGCAGGTAAGGTAGACAGAACTGGGTGGCAGTaGCTGAAATGTCCAGCAAACATCTCGGCTTGTGGGGCTGAGTGT +
Preference number: 5 (lower is better)
Translates to: GQQVLAGKVDRTGWQ*LKCPANISACGAEC
Trigger: ACACTCAGCCCCACAAGCCGAGATGTTTGCTGGACATTTCAGGCACTGCCACCCAGTTCTGTCTACCTTACCTGCTAACACCTGTTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000449350.6
ENST00000654593.1
ENST00000656099.1
ENST00000656867.1
ENST00000657966.1
ENST00000659267.1
ENST00000660199.1
ENST00000660282.1
ENST00000661206.1
ENST00000665355.1
ENST00000666958.1
ENST00000668599.1
ENST00000668675.1
ENST00000668727.1
ENST00000669236.1
CDS GCA 90 bp GCCTGGTGGCCTCAGGGCAGTTGGACTTCTTACACAGCAGGTCAGTaGTCCAAAAACAAGTACACAGTGAACAAGCTGGAAGCCACATGG +
Preference number: 5 (lower is better)
Translates to: AWWPQGSWTSYTAGQ*SKNKYTVNKLEATW
Trigger: CCATGTGGCTTCCAGCTTGTTCACTGTGTACTTGTTTTTGGAGCACTGACCTGCTGTGTAAGAAGTCCAACTGCCCTGAGGCCACCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656099.1
CDS CCA 90 bp ACTGTTGATCAGAGAACCTATCCATACATGGTCTCTCCAGCCTGGTaGCCTCAGGGCAGTTGGACTTCTTACACAGCAGGTCAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: TVDQRTYPYMVSPAW*PQGSWTSYTAGQCS
Trigger: GGAGCACTGACCTGCTGTGTAAGAAGTCCAACTGCCCTGAGGCCACCAGGCTGGAGAGACCATGTATGGATAGGTTCTCTGATCAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656099.1
CDS CCA 90 bp CCCTTTCTCCTGTTCCAAGGACAAGTATTCAGCTGGCAGGTGGGCTaGTCTGAAGGGTCTGTGATGGCTTCACTCACATGTCAGGCACAT +
Preference number: 5 (lower is better)
Translates to: PFLLFQGQVFSWQVG*SEGSVMASLTCQAH
Trigger: ATGTGCCTGACATGTGAGTGAAGCCATCACAGACCCTTCAGACCAGCCCACCTGCCAGCTGAATACTTGTCCTTGGAACAGGAGAAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668675.1
CDS TCA 90 bp CAAGGAAAGTGGTGGACCCTAGAAGGGAGAGGGAAGGGACTTCAGTaGGTGGACACGGGGAGCCCTAGCTATATCTACAAGTTTCACTTC +
Preference number: 5 (lower is better)
Translates to: QGKWWTLEGRGKGLQ*VDTGSPSYIYKFHF
Trigger: GAAGTGAAACTTGTAGATATAGCTAGGGCTCCCCGTGTCCACTCACTGAAGTCCCTTCCCTCTCCCTTCTAGGGTCCACCACTTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS GCA 90 bp TCTGAAGCTGTGCCATACTGTTCCCTTCACCAGGCACGCCCTCCATaGTCCTATCTAAGCATTCCCTCCTTGAGTCTCTCTAGACTGAGT +
Preference number: 5 (lower is better)
Translates to: SEAVPYCSLHQARPP*SYLSIPSLSLSRLS
Trigger: ACTCAGTCTAGAGAGACTCAAGGAGGGAATGCTTAGATAGGAGCATGGAGGGCGTGCCTGGTGAAGGGAACAGTATGGCACAGCTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000432154.5
ENST00000593326.6
ENST00000626476.3
ENST00000654490.1
ENST00000658493.1
ENST00000663517.1
ENST00000668599.1
ENST00000670206.1
CDS GCA 90 bp GGGACTTCATCTCCAGCCCGCATCCTGAGAAGGAGGAAGCCTCTGTaGTTTGGAAGCATTTATAAGACTTTGTGTAACCAAGGGCCACCC +
Preference number: 5 (lower is better)
Translates to: GTSSPARILRRRKPL*FGSIYKTLCNQGPP
Trigger: GGGTGGCCCTTGGTTACACAAAGTCTTATAAATGCTTCCAAAGCACAGAGGCTTCCTCCTTCTCAGGATGCGGGCTGGAGATGAAGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669285.1
CDS CCA 90 bp TTCCTAGGAATAGAAGGTAAGACCAGCATCATTCCAGGGCCACTGTaGATGGGCTTTCCCCGCCCAGGAAATGACTGCTGCATTGATCTC +
Preference number: 5 (lower is better)
Translates to: FLGIEGKTSIIPGPL*MGFPRPGNDCCIDL
Trigger: GAGATCAATGCAGCAGTCATTTCCTGGGCGGGGAAAGCCCATCCACAGTGGCCCTGGAATGATGCTGGTCTTACCTTCTATTCCTAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000449350.6
ENST00000654593.1
ENST00000656099.1
ENST00000656867.1
ENST00000657966.1
ENST00000659267.1
ENST00000660199.1
ENST00000660282.1
ENST00000665355.1
ENST00000666958.1
ENST00000668599.1
ENST00000668675.1
ENST00000669236.1
CDS CCA 90 bp AAGGATGGTCAACAGGTGTTAGCAGGTAAGGTAGACAGAACTGGGTaGCAGTGCCTGAAATGTCCAGCAAACATCTCGGCTTGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: KDGQQVLAGKVDRTG*QCLKCPANISACGA
Trigger: AGCCCCACAAGCCGAGATGTTTGCTGGACATTTCAGGCACTGCCACCCAGTTCTGTCTACCTTACCTGCTAACACCTGTTGACCATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000449350.6
ENST00000654593.1
ENST00000656099.1
ENST00000656867.1
ENST00000657966.1
ENST00000659267.1
ENST00000660199.1
ENST00000660282.1
ENST00000661206.1
ENST00000665355.1
ENST00000666958.1
ENST00000668599.1
ENST00000668675.1
ENST00000668727.1
ENST00000669236.1
CDS CCA 90 bp GAAACTGTTGATCAGAGAACCTATCCATACATGGTCTCTCCAGCCTaGTGGCCTCAGGGCAGTTGGACTTCTTACACAGCAGGTCAGTGC +
Preference number: 5 (lower is better)
Translates to: ETVDQRTYPYMVSPA*WPQGSWTSYTAGQC
Trigger: GCACTGACCTGCTGTGTAAGAAGTCCAACTGCCCTGAGGCCACCAGGCTGGAGAGACCATGTATGGATAGGTTCTCTGATCAACAGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656099.1
CDS CCA 90 bp CATAAGCCCTTATCAAGAGTTACCTCTGGGACCAGGTATCTCCCATaGGAAGTACTCAGGTCTGTAAGCCCAAGGCCTCACTGTGAGGAC +
Preference number: 5 (lower is better)
Translates to: HKPLSRVTSGTRYLP*EVLRSVSPRPHCED
Trigger: GTCCTCACAGTGAGGCCTTGGGCTTACAGACCTGAGTACTTCCCATGGGAGATACCTGGTCCCAGAGGTAACTCTTGATAAGGGCTTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669285.1
CDS GCA 90 bp ATGGAGCTGCAGAATCTGTCCTCCCCCTCTTGTATCTCTCCTGGCTaGCAACAGAAAGACTCCTGTTCTATAAGCCAGCAGCTTCATGAG +
Preference number: 5 (lower is better)
Translates to: MELQNLSSPSCISPG*QQKDSCSISQQLHE
Trigger: CTCATGAAGCTGCTGGCTTATAGAACAGGAGTCTTTCTGTTGGCAGCCAGGAGAGATACAAGAGGGGGAGGACAGATTCTGCAGCTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420947.3
ENST00000625668.3
ENST00000660052.1
ENST00000669285.1
CDS CCA 90 bp CGAAATGGAGCTGCAGAATCTGTCCTCCCCCTCTTGTATCTCTCCTaGCTGCCAACAGAAAGACTCCTGTTCTATAAGCCAGCAGCTTCA +
Preference number: 5 (lower is better)
Translates to: RNGAAESVLPLLYLS*LPTERLLFYKPAAS
Trigger: TGAAGCTGCTGGCTTATAGAACAGGAGTCTTTCTGTTGGCAGCCAGGAGAGATACAAGAGGGGGAGGACAGATTCTGCAGCTCCATTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420947.3
ENST00000625668.3
ENST00000660052.1
ENST00000669285.1
CDS CCA 90 bp GAAACTGTTGATCAGAGAACCTATCCATACATGGTCTCTCCAGCCTaGTGGCCTCAGGGCAGTTGGACTTCTTACACAGCAGGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: ETVDQRTYPYMVSPA*WPQGSWTSYTAGQC
Trigger: ACACTGACCTGCTGTGTAAGAAGTCCAACTGCCCTGAGGCCACCAGGCTGGAGAGACCATGTATGGATAGGTTCTCTGATCAACAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593326.6
ENST00000597775.1
CDS CCA 90 bp GTCAGTCTACCAGGTGACAGGACCCTATGCATGACTGTTTCCATGTaGCATGACAGCTGCATGTGGAGATATCGAATTTCCCGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: VSLPGDRTLCMTVSM*HDSCMWRYRISREA
Trigger: AGCCTCACGGGAAATTCGATATCTCCACATGCAGCTGTCATGCCACATGGAAACAGTCATGCATAGGGTCCTGTCACCTGGTAGACTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593326.6
ENST00000598535.6
ENST00000627894.1
ENST00000670206.1
CDS TCA 90 bp CTTCTTACAGTGAGAAAAACCTGTAATCTCAGCTACTCGGGAGGCTaGGGCAGAAGAATCGCTTCAACCCTGGAGACAGAGGTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: LLTVRKTCNLSYSGG*GRRIASTLETEVAV
Trigger: CACTGCAACCTCTGTCTCCAGGGTTGAAGCGATTCTTCTGCCTCAGCCTCCCGAGTAGCTGAGATTACAGGTTTTTCTCACTGTAAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS TCA 90 bp CTTCCCCACACCCGTTTCCATCTGTTTGCATGGACCAGAGCCACTTaGGATAGGGCCTTCCTAGGAATAGAAGGTAAGACCAGCATCATT +
Preference number: 5 (lower is better)
Translates to: LPHTRFHLFAWTRAT*DRAFLGIEGKTSII
Trigger: AATGATGCTGGTCTTACCTTCTATTCCTAGGAAGGCCCTATCTCAAGTGGCTCTGGTCCATGCAAACAGATGGAAACGGGTGTGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000449350.6
ENST00000654593.1
ENST00000656099.1
ENST00000656867.1
ENST00000657966.1
ENST00000659267.1
ENST00000660199.1
ENST00000660282.1
ENST00000665355.1
ENST00000666958.1
ENST00000668599.1
ENST00000668675.1
ENST00000669236.1
CDS GCA 90 bp CCTCTGACTTCCCATCTGAGCTCTGACTCACTCACTTCCAGCTTCTaGCTCCCCAAGAATTCAGACTCTTCAGAGCAAATACAACACCGA +
Preference number: 5 (lower is better)
Translates to: PLTSHLSSDSLTSSF*LPKNSDSSEQIQHR
Trigger: TCGGTGTTGTATTTGCTCTGAAGAGTCTGAATTCTTGGGGAGGCAGAAGCTGGAAGTGAGTGAGTCAGAGCTCAGATGGGAAGTCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599153.1
CDS CCA 90 bp ACCATTTGGAAGCTGTGTGATTCTGAGGAAGTTGTTAAACCTCTCTaGGCCTTCTTTGGTGCCGGTTTGGGGGCGAATATCAGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: TIWKLCDSEEVVKPL*AFFGAGLGANIRKE
Trigger: CTCCTTCCTGATATTCGCCCCCAAACCGGCACCAAAGAAGGCCCAGAGAGGTTTAACAACTTCCTCAGAATCACACAGCTTCCAAATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000601524.5
ENST00000601913.2
ENST00000610423.4
ENST00000620876.4
ENST00000625668.3
ENST00000625879.2
ENST00000656867.1
ENST00000659267.1
ENST00000660359.1
ENST00000665835.1
ENST00000668727.1
CDS CCA 90 bp TTGTCCATTTTATTTCTGGGAAACGAAGGAGTAAAGGAGTCTCTGTaGTCAGTCACCCAACACGCGTTGGTGGCCGTGCCACAAAGAGGT +
Preference number: 5 (lower is better)
Translates to: LSILFLGNEGVKESL*SVTQHALVAVPQRG
Trigger: ACCTCTTTGTGGCACGGCCACCAACGCGTGTTGGGTGACTGACCACAGAGACTCCTTTACTCCTTCGTTTCCCAGAAATAAAATGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665835.1
CDS GCA 90 bp TCCCGTTTGCTTTTTCAACGTATTGAGGGGGAATCAATACAACAGTaGTGGTCATTCTGTCTGCAACAACTGGCCAGGTGCCTGGGAATG +
Preference number: 5 (lower is better)
Translates to: SRLLFQRIEGESIQQ*WSFCLQQLARCLGM
Trigger: CATTCCCAGGCACCTGGCCAGTTGTTGCAGACAGAATGACCAGCACTGTTGTATTGATTCCCCCTCAATACGTTGAAAAAGCAAACGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS CCA 90 bp CGTTTGCTTTTTCAACGTATTGAGGGGGAATCAATACAACAGTGCTaGTCATTCTGTCTGCAACAACTGGCCAGGTGCCTGGGAATGGGA +
Preference number: 5 (lower is better)
Translates to: RLLFQRIEGESIQQC*SFCLQQLARCLGMG
Trigger: TCCCATTCCCAGGCACCTGGCCAGTTGTTGCAGACAGAATGACCAGCACTGTTGTATTGATTCCCCCTCAATACGTTGAAAAAGCAAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS CCA 90 bp GACTGCTGCATTGATCTCTGTGCCACTCAGGCCAGGGCATCCTTGTaGGGAGGATTCCAGTCTGCATTGCATCAAATACCTAGTATAAAA +
Preference number: 5 (lower is better)
Translates to: DCCIDLCATQARASL*GGFQSALHQIPSIK
Trigger: TTTTATACTAGGTATTTGATGCAATGCAGACTGGAATCCTCCCCACAAGGATGCCCTGGCCTGAGTGGCACAGAGATCAATGCAGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000449350.6
ENST00000654593.1
ENST00000656099.1
ENST00000656867.1
ENST00000657966.1
ENST00000659267.1
ENST00000660199.1
ENST00000660282.1
ENST00000665355.1
ENST00000666958.1
ENST00000668599.1
ENST00000668675.1
ENST00000669236.1
CDS CCA 90 bp AGCACTGAGCCAGGCACTACCATATCCATAATCTCCTCTGAGACTTaGAAACCAAGCTGGGGCCAGGTTACAAATGACTTCACATGCCAT +
Preference number: 5 (lower is better)
Translates to: STEPGTTISIISSET*KPSWGQVTNDFTCH
Trigger: ATGGCATGTGAAGTCATTTGTAACCTGGCCCCAGCTTGGTTTCCAAGTCTCAGAGGAGATTATGGATATGGTAGTGCCTGGCTCAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000449350.6
ENST00000654593.1
ENST00000656099.1
ENST00000656867.1
ENST00000657966.1
ENST00000659267.1
ENST00000660199.1
ENST00000660282.1
ENST00000661206.1
ENST00000665355.1
ENST00000666958.1
ENST00000668599.1
ENST00000668675.1
ENST00000668727.1
ENST00000669236.1
CDS CCA 90 bp AGGACCCTATGCATGACTGTTTCCATGTGGCATGACAGCTGCATGTaGAGATATCGAATTTCCCGTGAGGCTGACCTCCCACTTATTCTT +
Preference number: 5 (lower is better)
Translates to: RTLCMTVSMWHDSCM*RYRISREADLPLIL
Trigger: AAGAATAAGTGGGAGGTCAGCCTCACGGGAAATTCGATATCTCCACATGCAGCTGTCATGCCACATGGAAACAGTCATGCATAGGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593326.6
ENST00000598535.6
ENST00000627894.1
ENST00000670206.1
CDS TCA 90 bp CCCTGCTGCCCACATTTTGCAAAAATTTGCGCCATGTCACAGTTCTaGTTAGGTGCCAAGAGAACTATTTCCCAGGCCACAGCTTTAACA +
Preference number: 5 (lower is better)
Translates to: PCCPHFAKICAMSQF*LGAKRTISQATALT
Trigger: TGTTAAAGCTGTGGCCTGGGAAATAGTTCTCTTGGCACCTAATCAGAACTGTGACATGGCGCAAATTTTTGCAAAATGTGGGCAGCAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS TCA 90 bp TGGAAGGTTGAGTCAAGAGCATCTCTGCAATGGATGTGGCATGTGTaGGAAAGAGGCACACGTAGAATTTCACACGCGATTCAGCACTTT +
Preference number: 5 (lower is better)
Translates to: WKVESRASLQWMWHV*ERGTRRISHAIQHF
Trigger: AAAGTGCTGAATCGCGTGTGAAATTCTACGTGTGCCTCTTTCTCACACATGCCACATCCATTGCAGAGATGCTCTTGACTCAACCTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS TCA 90 bp GCTGACCTCCCACTTATTCTTCAGGATGAGCTGAGCTGTATTTCATaGGGATTGTTTGCTGTGGGTTTCAGTCATCTTTCTGATCCTGCC +
Preference number: 5 (lower is better)
Translates to: ADLPLILQDELSCIS*GLFAVGFSHLSDPA
Trigger: GGCAGGATCAGAAAGATGACTGAAACCCACAGCAAACAATCCTCATGAAATACAGCTCAGCTCATCCTGAAGAATAAGTGGGAGGTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598535.6
CDS GCA 90 bp AACGTATTGAGGGGGAATCAATACAACAGTGCTGGTCATTCTGTCTaGAACAACTGGCCAGGTGCCTGGGAATGGGAATACTTCATTTCT +
Preference number: 5 (lower is better)
Translates to: NVLRGNQYNSAGHSV*NNWPGAWEWEYFIS
Trigger: AGAAATGAAGTATTCCCATTCCCAGGCACCTGGCCAGTTGTTGCAGACAGAATGACCAGCACTGTTGTATTGATTCCCCCTCAATACGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS CCA 90 bp AGGGGGAATCAATACAACAGTGCTGGTCATTCTGTCTGCAACAACTaGCCAGGTGCCTGGGAATGGGAATACTTCATTTCTCTTACTTTC +
Preference number: 5 (lower is better)
Translates to: RGNQYNSAGHSVCNN*PGAWEWEYFISLTF
Trigger: GAAAGTAAGAGAAATGAAGTATTCCCATTCCCAGGCACCTGGCCAGTTGTTGCAGACAGAATGACCAGCACTGTTGTATTGATTCCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS CCA 90 bp GACAACTTCATATTGCGTCTCATGAATGAGAGGATGACTGGTTCTTaGAGGTGTAAGGAAATAGCAGGCATGGTGAGGGAGGGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: DNFILRLMNERMTGS*RCKEIAGMVREGFF
Trigger: AAAGAAGCCCTCCCTCACCATGCCTGCTATTTCCTTACACCTCCAAGAACCAGTCATCCTCTCATTCATGAGACGCAATATGAAGTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665835.1
CDS TCA 90 bp GCTGACCTCCCACTTATTCTTCAGGATGAGCTGAGCTGTATTTCATaGGGATTGTTTGCTGTGGGTTTCAGTCATCCTGTAGGAATGTGT +
Preference number: 5 (lower is better)
Translates to: ADLPLILQDELSCIS*GLFAVGFSHPVGMC
Trigger: ACACATTCCTACAGGATGACTGAAACCCACAGCAAACAATCCTCATGAAATACAGCTCAGCTCATCCTGAAGAATAAGTGGGAGGTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593326.6
ENST00000627894.1
ENST00000670206.1
CDS GCA 90 bp CCCACATTTTGCAAAAATTTGCGCCATGTCACAGTTCTGATTAGGTaGCAAGAGAACTATTTCCCAGGCCACAGCTTTAACAAGGCCATG +
Preference number: 5 (lower is better)
Translates to: PTFCKNLRHVTVLIR*QENYFPGHSFNKAM
Trigger: CATGGCCTTGTTAAAGCTGTGGCCTGGGAAATAGTTCTCTTGGCACCTAATCAGAACTGTGACATGGCGCAAATTTTTGCAAAATGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS GCA 90 bp TCAATACAACAGTGCTGGTCATTCTGTCTGCAACAACTGGCCAGGTaGCTGGGAATGGGAATACTTCATTTCTCTTACTTTCCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: SIQQCWSFCLQQLAR*LGMGILHFSYFPSL
Trigger: AAGGGAAGGAAAGTAAGAGAAATGAAGTATTCCCATTCCCAGGCACCTGGCCAGTTGTTGCAGACAGAATGACCAGCACTGTTGTATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS GCA 90 bp TCCCTGCTTCATCATCTTTACTCGTGTTCTTCCTTTGGTTTAGAATaGCTTTCCACATTCTGCACACTCAGCTCCTACCCAGCACCATTT +
Preference number: 5 (lower is better)
Translates to: SLLHHLYSCSSFGLE*LSTFCTLSSYPAPF
Trigger: AAATGGTGCTGGGTAGGAGCTGAGTGTGCAGAATGTGGAAAGGCATTCTAAACCAAAGGAAGAACACGAGTAAAGATGATGAAGCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000432154.5
ENST00000593326.6
ENST00000593559.6
ENST00000597775.1
ENST00000598535.6
ENST00000599153.1
ENST00000599441.5
ENST00000601913.2
ENST00000609015.6
ENST00000625668.3
ENST00000626476.3
ENST00000627894.1
ENST00000629795.2
ENST00000660359.1
ENST00000670206.1
CDS GCA 90 bp TCCCCAGGGAAGGATCAATGCATTTATCTGAGTCAAGTTCAACTTTaGACTCCAGTCCTTCAGGCAGGTAGAGAGGTATCTGAATCATGT +
Preference number: 5 (lower is better)
Translates to: SPGKDQCIYLSQVQL*TPVLQAGREVSESC
Trigger: ACATGATTCAGATACCTCTCTACCTGCCTGAAGGACTGGAGTGCAAAGTTGAACTTGACTCAGATAAATGCATTGATCCTTCCCTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599735.3
CDS CCA 90 bp TACAACAGTGCTGGTCATTCTGTCTGCAACAACTGGCCAGGTGCCTaGGAATGGGAATACTTCATTTCTCTTACTTTCCTTCCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: YNSAGHSVCNNWPGA*EWEYFISLTFLPFL
Trigger: AAGAAAGGGAAGGAAAGTAAGAGAAATGAAGTATTCCCATTCCCAGGCACCTGGCCAGTTGTTGCAGACAGAATGACCAGCACTGTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS TCA 90 bp ACTGTGGTCGGAACAGTGATTTCTCCAAACATCTTTGGTATGGACTaGTATTCAAACAGGTCAAGCAATGCTGGGGACCTTTGGCCTTTA +
Preference number: 5 (lower is better)
Translates to: TVVGTVISPNIFGMD*YSNRSSNAGDLWPL
Trigger: TAAAGGCCAAAGGTCCCCAGCATTGCTTGACCTGTTTGAATATCAGTCCATACCAAAGATGTTTGGAGAAATCACTGTTCCGACCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609304.5
CDS TCA 90 bp GTCTTTTATGCCGATTTTACTGGCCTCGTTGAGAAGGCAGTTTCTTaGCTTCTTGGCAAAGGGATTGACCTTAAGTCTGTTTCTAGAGGG +
Preference number: 5 (lower is better)
Translates to: VFYADFTGLVEKAVS*LLGKGIDLKSVSRG
Trigger: CCCTCTAGAAACAGACTTAAGGTCAATCCCTTTGCCAAGAAGTCAAGAAACTGCCTTCTCAACGAGGCCAGTAAAATCGGCATAAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000653573.1
CDS TCA 90 bp TCTCTTACTTTCCTTCCCTTTCTTCCAGTGGCTCAGAGTCAAATGTaGGAGAAGACAGGACAAACACAAAAACCACACTGTACCAAACAC +
Preference number: 5 (lower is better)
Translates to: SLTFLPFLPVAQSQM*EKTGQTQKPHCTKH
Trigger: GTGTTTGGTACAGTGTGGTTTTTGTGTTTGTCCTGTCTTCTCTCACATTTGACTCTGAGCCACTGGAAGAAAGGGAAGGAAAGTAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS CCA 90 bp GACCATTTGCTAAGTGCTGGGGCAGAGTTGAAATTCAAATCCTTCTaGCTTAAGGACAACTTCATATTGCGTCTCATGAATGAGAGGATG +
Preference number: 5 (lower is better)
Translates to: DHLLSAGAELKFKSF*LKDNFILRLMNERM
Trigger: CATCCTCTCATTCATGAGACGCAATATGAAGTTGTCCTTAAGCCAGAAGGATTTGAATTTCAACTCTGCCCCAGCACTTAGCAAATGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665835.1
CDS TCA 90 bp ATACAACACCGAGAAATCATTCTCCACTCAGCTAAGCACATTCGGTaGGCTTCTGATTGCAATGGACATTTTCTGATCCTGCCTCATTAT +
Preference number: 5 (lower is better)
Translates to: IQHREIILHSAKHIR*ASDCNGHFLILPHY
Trigger: ATAATGAGGCAGGATCAGAAAATGTCCATTGCAATCAGAAGCTCACCGAATGTGCTTAGCTGAGTGGAGAATGATTTCTCGGTGTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593559.6
ENST00000599153.1
CDS TCA 90 bp AACTTGGCTTTCGAGATATGTCTAGAAGCTGTTTTCTCAGCACCTTaGAAATCTATGGGAGATCTTCCTTCTTGTTTTAAGTATTCAGCT +
Preference number: 5 (lower is better)
Translates to: NLAFEICLEAVFSAP*KSMGDLPSCFKYSA
Trigger: AGCTGAATACTTAAAACAAGAAGGAAGATCTCCCATAGATTTTCAAGGTGCTGAGAAAACAGCTTCTAGACATATCTCGAAAGCCAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593326.6
CDS GCA 72 bp GTTTCCCCCGCCGCGAGGCTGAGCCGGTGGCGCAGCTaGTCAAAGGTCACGCCCGAGACACGTCCGCACAAG +
Preference number: 6 (lower is better)
Translates to: VSPAARLSRWRS*SKVTPETRPHK
Trigger: CTTGTGCGGACGTGTCTCGGGCGTGACCTTTGAGCAGCTGCGCCACCGGCTCAGCCTCGCGGCGGGGGAAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625668.3
CDS GCA 72 bp CTCTGTGGTCAGTCACCCAACACGCGTTGGTGGCCGTaGCACAAAGAGGTCCTCCGTGCAGTGCTGCAGGCC +
Preference number: 6 (lower is better)
Translates to: LCGQSPNTRWWP*HKEVLRAVLQA
Trigger: GGCCTGCAGCACTGCACGGAGGACCTCTTTGTGGCACGGCCACCAACGCGTGTTGGGTGACTGACCACAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665835.1
CDS GCA 72 bp CACGCGTTGGTGGCCGTGCCACAAAGAGGTCCTCCGTaGAGTGCTGCAGGCCATTCACTCCCTCCACAGCTT +
Preference number: 6 (lower is better)
Translates to: HALVAVPQRGPP*SAAGHSLPPQL
Trigger: AAGCTGTGGAGGGAGTGAATGGCCTGCAGCACTGCACGGAGGACCTCTTTGTGGCACGGCCACCAACGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665835.1
CDS CCA 72 bp GTAAGCCCAAGGCCTCACTGTGAGGACACCTGGCTCTaGGCAGGGCCTTCTGGGACCTCAAGGCTTTGCCTG +
Preference number: 6 (lower is better)
Translates to: VSPRPHCEDTWL*AGPSGTSRLCL
Trigger: CAGGCAAAGCCTTGAGGTCCCAGAAGGCCCTGCCCAGAGCCAGGTGTCCTCACAGTGAGGCCTTGGGCTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669285.1
CDS CAA 90 bp GGTTCTGGGCCTGCAGCAAGCTCTAACCTGCAGATGAGAATGACTTaGGGGCCCCCAGAGATGAGGGCTACTGAGGCAGGGCAGAGCCCC +
Preference number: 6 (lower is better)
Translates to: GSGPAASSNLQMRMT*GPPEMRATEAGQSP
Trigger: GGGGCTCTGCCCTGCCTCAGTAGCCCTCATCTCTGGGGGCCCCAAAGTCATTCTCATCTGCAGGTTAGAGCTTGCTGCAGGCCCAGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS GCA 72 bp CCCCTTGCTGCTGGCTCACCCTTGCCTCTGAAGCTGTaGCATACTGTTCCCTTCACCAGGCACGCCCTCCAT +
Preference number: 6 (lower is better)
Translates to: PLAAGSPLPLKL*HTVPFTRHALH
Trigger: ATGGAGGGCGTGCCTGGTGAAGGGAACAGTATGGCACAGCTTCAGAGGCAAGGGTGAGCCAGCAGCAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000432154.5
ENST00000593326.6
ENST00000626476.3
ENST00000654490.1
ENST00000658493.1
ENST00000663517.1
ENST00000667864.1
ENST00000668599.1
ENST00000670206.1
CDS CCA 72 bp AGGAGTCTCTGTGGTCAGTCACCCAACACGCGTTGGTaGCCGTGCCACAAAGAGGTCCTCCGTGCAGTGCTG +
Preference number: 6 (lower is better)
Translates to: RSLCGQSPNTRW*PCHKEVLRAVL
Trigger: CAGCACTGCACGGAGGACCTCTTTGTGGCACGGCCACCAACGCGTGTTGGGTGACTGACCACAGAGACTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665835.1
CDS CAA 72 bp ACCGGCCATAGCCAGCCCCTTGCTGCTGGCTCACCCTaGCCTCTGAAGCTGTGCCATACTGTTCCCTTCACC +
Preference number: 6 (lower is better)
Translates to: TGHSQPLAAGSP*PLKLCHTVPFT
Trigger: GGTGAAGGGAACAGTATGGCACAGCTTCAGAGGCAAGGGTGAGCCAGCAGCAAGGGGCTGGCTATGGCCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000432154.5
ENST00000593326.6
ENST00000626476.3
ENST00000629693.1
ENST00000654490.1
ENST00000658493.1
ENST00000663517.1
ENST00000667864.1
ENST00000668599.1
ENST00000670206.1
CDS CAA 90 bp GGCCACTGTGGATGGGCTTTCCCCGCCCAGGAAATGACTGCTGCATaGATCTCTGTGCCACTCAGGCCAGGGCATCCTTGTGGGGAGGAT +
Preference number: 6 (lower is better)
Translates to: GHCGWAFPAQEMTAA*ISVPLRPGHPCGED
Trigger: ATCCTCCCCACAAGGATGCCCTGGCCTGAGTGGCACAGAGATCAATGCAGCAGTCATTTCCTGGGCGGGGAAAGCCCATCCACAGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000449350.6
ENST00000654593.1
ENST00000656099.1
ENST00000656867.1
ENST00000657966.1
ENST00000659267.1
ENST00000660199.1
ENST00000660282.1
ENST00000665355.1
ENST00000666958.1
ENST00000668599.1
ENST00000668675.1
ENST00000669236.1
CDS TCA 72 bp ATAGCCAGCCCCTTGCTGCTGGCTCACCCTTGCCTCTaGAGCTGTGCCATACTGTTCCCTTCACCAGGCACG +
Preference number: 6 (lower is better)
Translates to: IASPLLLAHPCL*SCAILFPSPGT
Trigger: CGTGCCTGGTGAAGGGAACAGTATGGCACAGCTTCAGAGGCAAGGGTGAGCCAGCAGCAAGGGGCTGGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000432154.5
ENST00000593326.6
ENST00000626476.3
ENST00000654490.1
ENST00000658493.1
ENST00000663517.1
ENST00000667864.1
ENST00000668599.1
ENST00000670206.1
CDS CCA 72 bp GCGGCCTTTAAGCAGGATCCGGGAGAATGGGCAAACTaGGACTCGCAAGGAGAGAGACAGTGGGTTCCGCTG +
Preference number: 6 (lower is better)
Translates to: AAFKQDPGEWAN*DSQGERQWVPL
Trigger: CAGCGGAACCCACTGTCTCTCTCCTTGCGAGTCCCAGTTTGCCCATTCTCCCGGATCCTGCTTAAAGGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS CCA 72 bp CTGGCAGAGGCGGCCTTTAAGCAGGATCCGGGAGAATaGGCAAACTGGGACTCGCAAGGAGAGAGACAGTGG +
Preference number: 6 (lower is better)
Translates to: LAEAAFKQDPGE*ANWDSQGERQW
Trigger: CCACTGTCTCTCTCCTTGCGAGTCCCAGTTTGCCCATTCTCCCGGATCCTGCTTAAAGGCCGCCTCTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS CAA 72 bp CCCAGTGGGTCCAAGAAGGCCACGTGGTGGACAAGCTaGGTTCTGGGCCTGCAGCAAGCTCTAACCTGCAGA +
Preference number: 6 (lower is better)
Translates to: PSGSKKATWWTS*VLGLQQALTCR
Trigger: TCTGCAGGTTAGAGCTTGCTGCAGGCCCAGAACCAAGCTTGTCCACCACGTGGCCTTCTTGGACCCACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS CAA 72 bp CTCAGGCACGCGGCATCTCTCCCCACCGGCAGCGCCTaGAAATACCAAAGGCCTAGCCAAAGATGGAACCGT +
Preference number: 6 (lower is better)
Translates to: LRHAASLPTGSA*KYQRPSQRWNR
Trigger: ACGGTTCCATCTTTGGCTAGGCCTTTGGTATTTCAAGGCGCTGCCGGTGGGGAGAGATGCCGCGTGCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000443776.6
ENST00000597974.5
ENST00000601913.2
ENST00000609015.6
ENST00000620876.4
ENST00000622169.5
ENST00000625586.1
ENST00000625879.2
ENST00000630262.2
ENST00000630484.2
ENST00000654593.1
ENST00000656867.1
ENST00000660052.1
ENST00000660359.1
ENST00000666958.1
ENST00000668727.1
ENST00000669285.1
CDS CAA 90 bp CCAGAGCCTCTCAGGCACGCGGCATCTCTCCCCACCGGCAGCGCCTaGAAATACCAAAGGCCTAGCCAAAGATGGAACCGTTTTGTTGGG +
Preference number: 6 (lower is better)
Translates to: PEPLRHAASLPTGSA*KYQRPSQRWNRFVG
Trigger: CCCAACAAAACGGTTCCATCTTTGGCTAGGCCTTTGGTATTTCAAGGCGCTGCCGGTGGGGAGAGATGCCGCGTGCCTGAGAGGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000443776.6
ENST00000597974.5
ENST00000601913.2
ENST00000609015.6
ENST00000620876.4
ENST00000622169.5
ENST00000625586.1
ENST00000625879.2
ENST00000630262.2
ENST00000630484.2
ENST00000654593.1
ENST00000656867.1
ENST00000660052.1
ENST00000660359.1
ENST00000666958.1
ENST00000668727.1
ENST00000669285.1
CDS CAA 90 bp AACGAAGGAGTAAAGGAGTCTCTGTGGTCAGTCACCCAACACGCGTaGGTGGCCGTGCCACAAAGAGGTCCTCCGTGCAGTGCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: NEGVKESLWSVTQHA*VAVPQRGPPCSAAG
Trigger: GCCTGCAGCACTGCACGGAGGACCTCTTTGTGGCACGGCCACCAACGCGTGTTGGGTGACTGACCACAGAGACTCCTTTACTCCTTCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665835.1
CDS TCA 72 bp TCAGGCACGCGGCATCTCTCCCCACCGGCAGCGCCTTaGAATACCAAAGGCCTAGCCAAAGATGGAACCGTT +
Preference number: 6 (lower is better)
Translates to: SGTRHLSPPAAP*NTKGLAKDGTV
Trigger: AACGGTTCCATCTTTGGCTAGGCCTTTGGTATTTCAAGGCGCTGCCGGTGGGGAGAGATGCCGCGTGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000443776.6
ENST00000597974.5
ENST00000601913.2
ENST00000609015.6
ENST00000620876.4
ENST00000622169.5
ENST00000625586.1
ENST00000625879.2
ENST00000630262.2
ENST00000630484.2
ENST00000654593.1
ENST00000656867.1
ENST00000660052.1
ENST00000660359.1
ENST00000666958.1
ENST00000668727.1
ENST00000669285.1
CDS CCA 72 bp ACATGCCATTCTCCCCGCTGCCTGCCACTTGTACCTTaGGCAGCCACTGGGGACATTCCTGGTTCTGGATTC +
Preference number: 6 (lower is better)
Translates to: TCHSPRCLPLVP*AATGDIPGSGF
Trigger: GAATCCAGAACCAGGAATGTCCCCAGTGGCTGCCCAAGGTACAAGTGGCAGGCAGCGGGGAGAATGGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000449350.6
ENST00000654593.1
ENST00000656099.1
ENST00000656867.1
ENST00000657966.1
ENST00000659267.1
ENST00000660199.1
ENST00000660282.1
ENST00000661206.1
ENST00000665355.1
ENST00000666958.1
ENST00000668599.1
ENST00000668675.1
ENST00000668727.1
ENST00000669236.1
CDS CAA 72 bp GGATGGGCTTTCCCCGCCCAGGAAATGACTGCTGCATaGATCTCTGTGCCACTCAGGCCAGGGCATCCTTGT +
Preference number: 6 (lower is better)
Translates to: GWAFPAQEMTAA*ISVPLRPGHPC
Trigger: ACAAGGATGCCCTGGCCTGAGTGGCACAGAGATCAATGCAGCAGTCATTTCCTGGGCGGGGAAAGCCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000449350.6
ENST00000654593.1
ENST00000656099.1
ENST00000656867.1
ENST00000657966.1
ENST00000659267.1
ENST00000660199.1
ENST00000660282.1
ENST00000665355.1
ENST00000666958.1
ENST00000668599.1
ENST00000668675.1
ENST00000669236.1
CDS CAA 72 bp GTAAAGGAGTCTCTGTGGTCAGTCACCCAACACGCGTaGGTGGCCGTGCCACAAAGAGGTCCTCCGTGCAGT +
Preference number: 6 (lower is better)
Translates to: VKESLWSVTQHA*VAVPQRGPPCS
Trigger: ACTGCACGGAGGACCTCTTTGTGGCACGGCCACCAACGCGTGTTGGGTGACTGACCACAGAGACTCCTTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665835.1
CDS CAA 90 bp AGCTGTGTGATTCTGAGGAAGTTGTTAAACCTCTCTGGGCCTTCTTaGGTGCCTCCCAGAGCCTCTCAGGCACGCGGCATCTCTCCCCAC +
Preference number: 6 (lower is better)
Translates to: SCVILRKLLNLSGPS*VPPRASQARGISPH
Trigger: GTGGGGAGAGATGCCGCGTGCCTGAGAGGCTCTGGGAGGCACCAAAGAAGGCCCAGAGAGGTTTAACAACTTCCTCAGAATCACACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000443776.6
ENST00000609015.6
ENST00000622169.5
ENST00000630262.2
ENST00000630484.2
ENST00000654593.1
ENST00000660052.1
ENST00000666958.1
ENST00000669285.1
CDS GCA 72 bp CACAAACTAGGGGCTGATACCAACTTCACCACCCAGTaGAGGAGGGCTCTTCTTCTACTTCTGGGGTCCCGC +
Preference number: 6 (lower is better)
Translates to: HKLGADTNFTTQ*RRALLLLLGSR
Trigger: GCGGGACCCCAGAAGTAGAAGAAGAGCCCTCCTGCACTGGGTGGTGAAGTTGGTATCAGCCCCTAGTTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449350.6
ENST00000656099.1
ENST00000657966.1
CDS TCA 72 bp TGGTGGACCCTAGAAGGGAGAGGGAAGGGACTTCAGTaGGTGGACACGGGGAGCCCTAGCTATATCTACAAG +
Preference number: 6 (lower is better)
Translates to: WWTLEGRGKGLQ*VDTGSPSYIYK
Trigger: CTTGTAGATATAGCTAGGGCTCCCCGTGTCCACTCACTGAAGTCCCTTCCCTCTCCCTTCTAGGGTCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS TCA 72 bp CAGTGTCAGCGTCAGGGGTGGGAAGTGTACAGATATTaGAGCCAGATGGAGCTGCAGTCAACCAGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: QCQRQGWEVYRY*SQMELQSTSSA
Trigger: GGCAGAGCTGGTTGACTGCAGCTCCATCTGGCTTCAATATCTGTACACTTCCCACCCCTGACGCTGACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609933.3
CDS TCA 72 bp ATCACAGGGTCTCAGATAGGGCGCAGCTCTCACAAATaGCAAGTTCTCTGCCTGGGAGGCATGCAGGCCTCT +
Preference number: 6 (lower is better)
Translates to: ITGSQIGRSSHK*QVLCLGGMQAS
Trigger: AGAGGCCTGCATGCCTCCCAGGCAGAGAACTTGTCATTTGTGAGAGCTGCGCCCTATCTGAGACCCTGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665835.1
CDS GCA 72 bp GCACAGTCACATAGCTCTTCAGGAAGTTGTCTTCACTaGACAGAAACCAGCCGCCCCTCCTTGAGGTGCCTC +
Preference number: 6 (lower is better)
Translates to: AQSHSSSGSCLH*TETSRPSLRCL
Trigger: GAGGCACCTCAAGGAGGGGCGGCTGGTTTCTGTGCAGTGAAGACAACTTCCTGAAGAGCTATGTGACTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609933.3
CDS CCA 72 bp AAGGTAAGACCAGCATCATTCCAGGGCCACTGTGGATaGGCTTTCCCCGCCCAGGAAATGACTGCTGCATTG +
Preference number: 6 (lower is better)
Translates to: KVRPASFQGHCG*AFPAQEMTAAL
Trigger: CAATGCAGCAGTCATTTCCTGGGCGGGGAAAGCCCATCCACAGTGGCCCTGGAATGATGCTGGTCTTACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000449350.6
ENST00000654593.1
ENST00000656099.1
ENST00000656867.1
ENST00000657966.1
ENST00000659267.1
ENST00000660199.1
ENST00000660282.1
ENST00000665355.1
ENST00000666958.1
ENST00000668599.1
ENST00000668675.1
ENST00000669236.1
CDS CCA 72 bp ATAGAAGGTAAGACCAGCATCATTCCAGGGCCACTGTaGATGGGCTTTCCCCGCCCAGGAAATGACTGCTGC +
Preference number: 6 (lower is better)
Translates to: IEGKTSIIPGPL*MGFPRPGNDCC
Trigger: GCAGCAGTCATTTCCTGGGCGGGGAAAGCCCATCCACAGTGGCCCTGGAATGATGCTGGTCTTACCTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000449350.6
ENST00000654593.1
ENST00000656099.1
ENST00000656867.1
ENST00000657966.1
ENST00000659267.1
ENST00000660199.1
ENST00000660282.1
ENST00000665355.1
ENST00000666958.1
ENST00000668599.1
ENST00000668675.1
ENST00000669236.1
CDS CAA 72 bp CAGACTAGATCTGAGGTGCTTTTCAGAACCCTGAAGTaGCCCCAGTGGGTCCAAGAAGGCCACGTGGTGGAC +
Preference number: 6 (lower is better)
Translates to: QTRSEVLFRTLK*PQWVQEGHVVD
Trigger: GTCCACCACGTGGCCTTCTTGGACCCACTGGGGCAACTTCAGGGTTCTGAAAAGCACCTCAGATCTAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS CAA 72 bp GTACTCATGCTGACGCAGGACAGGCAAGCCCCAAAATaGAGGCTTAGCCCAGGAGGGTTCTTGGCTTCATCC +
Preference number: 6 (lower is better)
Translates to: VLMLTQDRQAPK*RLSPGGFLASS
Trigger: GGATGAAGCCAAGAACCCTCCTGGGCTAAGCCTCAATTTTGGGGCTTGCCTGTCCTGCGTCAGCATGAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000662513.1
ENST00000665355.1
ENST00000666539.1
CDS CAA 90 bp AGGTTACAAATGACTTCACATGCCATTCTCCCCGCTGCCTGCCACTaGTACCTTGGGCAGCCACTGGGGACATTCCTGGTTCTGGATTCC +
Preference number: 6 (lower is better)
Translates to: RLQMTSHAILPAACH*YLGQPLGTFLVLDS
Trigger: GGAATCCAGAACCAGGAATGTCCCCAGTGGCTGCCCAAGGTACAAGTGGCAGGCAGCGGGGAGAATGGCATGTGAAGTCATTTGTAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000449350.6
ENST00000654593.1
ENST00000656099.1
ENST00000656867.1
ENST00000657966.1
ENST00000659267.1
ENST00000660199.1
ENST00000660282.1
ENST00000661206.1
ENST00000665355.1
ENST00000666958.1
ENST00000668599.1
ENST00000668675.1
ENST00000668727.1
ENST00000669236.1
CDS TCA 72 bp CTCTGTCCATCCATGGATGCAGGGTCCTTTACCAGATaGCAAGGAAAGTGGTGGACCCTAGAAGGGAGAGGG +
Preference number: 6 (lower is better)
Translates to: LCPSMDAGSFTR*QGKWWTLEGRG
Trigger: CCCTCTCCCTTCTAGGGTCCACCACTTTCCTTGTCATCTGGTAAAGGACCCTGCATCCATGGATGGACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS TCA 72 bp AGCAGAGAAATCTGTCCAGGGTCACAAACTAGGGGCTaGTACCAACTTCACCACCCAGTGCAGGAGGGCTCT +
Preference number: 6 (lower is better)
Translates to: SREICPGSQTRG*YQLHHPVQEGS
Trigger: AGAGCCCTCCTGCACTGGGTGGTGAAGTTGGTATCAGCCCCTAGTTTGTGACCCTGGACAGATTTCTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449350.6
ENST00000656099.1
ENST00000657966.1
CDS GCA 72 bp GTGCCATACTGTTCCCTTCACCAGGCACGCCCTCCATaGTCCTATCTAAGCATTCCCTCCTTGAGTCTCTCT +
Preference number: 6 (lower is better)
Translates to: VPYCSLHQARPP*SYLSIPSLSLS
Trigger: AGAGAGACTCAAGGAGGGAATGCTTAGATAGGAGCATGGAGGGCGTGCCTGGTGAAGGGAACAGTATGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000432154.5
ENST00000593326.6
ENST00000626476.3
ENST00000654490.1
ENST00000658493.1
ENST00000663517.1
ENST00000668599.1
ENST00000670206.1
CDS GCA 72 bp AATGGTGGCCTTGGCCAGAGTGGTTGCAGTGGAGACTaGTGGAAGGTTGAGTCAAGAGCATCTCTGCAATGG +
Preference number: 6 (lower is better)
Translates to: NGGLGQSGCSGD*WKVESRASLQW
Trigger: CCATTGCAGAGATGCTCTTGACTCAACCTTCCAGCAGTCTCCACTGCAACCACTCTGGCCAAGGCCACCATT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS GCA 72 bp TTACAAATGACTTCACATGCCATTCTCCCCGCTGCCTaGCACTTGTACCTTGGGCAGCCACTGGGGACATTC +
Preference number: 6 (lower is better)
Translates to: LQMTSHAILPAA*HLYLGQPLGTF
Trigger: GAATGTCCCCAGTGGCTGCCCAAGGTACAAGTGGCAGGCAGCGGGGAGAATGGCATGTGAAGTCATTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000449350.6
ENST00000654593.1
ENST00000656099.1
ENST00000656867.1
ENST00000657966.1
ENST00000659267.1
ENST00000660199.1
ENST00000660282.1
ENST00000661206.1
ENST00000665355.1
ENST00000666958.1
ENST00000668599.1
ENST00000668675.1
ENST00000668727.1
ENST00000669236.1
CDS GCA 72 bp AAACCAAGCTGGGGCCAGGTTACAAATGACTTCACATaGCATTCTCCCCGCTGCCTGCCACTTGTACCTTGG +
Preference number: 6 (lower is better)
Translates to: KPSWGQVTNDFT*HSPRCLPLVPW
Trigger: CCAAGGTACAAGTGGCAGGCAGCGGGGAGAATGGCATGTGAAGTCATTTGTAACCTGGCCCCAGCTTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000449350.6
ENST00000654593.1
ENST00000656099.1
ENST00000656867.1
ENST00000657966.1
ENST00000659267.1
ENST00000660199.1
ENST00000660282.1
ENST00000661206.1
ENST00000665355.1
ENST00000666958.1
ENST00000668599.1
ENST00000668675.1
ENST00000668727.1
ENST00000669236.1
CDS CCA 72 bp GAATGGGCAAACTGGGACTCGCAAGGAGAGAGACAGTaGGTTCCGCTGGAGGCTAATGCTCTAACAAAGGCA +
Preference number: 6 (lower is better)
Translates to: EWANWDSQGERQ*VPLEANALTKA
Trigger: TGCCTTTGTTAGAGCATTAGCCTCCAGCGGAACCCACTGTCTCTCTCCTTGCGAGTCCCAGTTTGCCCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS CCA 72 bp TTTCTCCTGTTCCAAGGACCTCAGCCAAGCCAGGGCTaGATCCAGGGAAACTCATCACCATTCCTGGAAGAG +
Preference number: 6 (lower is better)
Translates to: FLLFQGPQPSQG*IQGNSSPFLEE
Trigger: CTCTTCCAGGAATGGTGATGAGTTTCCCTGGATCCAGCCCTGGCTTGGCTGAGGTCCTTGGAACAGGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000443776.6
ENST00000622169.5
ENST00000654593.1
ENST00000656867.1
ENST00000658493.1
ENST00000659267.1
ENST00000667864.1
ENST00000668727.1
CDS CCA 72 bp CAGAGAACCTATCCATACATGGTCTCTCCAGCCTGGTaGCCTCAGGGCAGTTGGACTTCTTACACAGCAGGT +
Preference number: 6 (lower is better)
Translates to: QRTYPYMVSPAW*PQGSWTSYTAG
Trigger: ACCTGCTGTGTAAGAAGTCCAACTGCCCTGAGGCCACCAGGCTGGAGAGACCATGTATGGATAGGTTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593326.6
ENST00000597775.1
ENST00000656099.1
CDS CCA 72 bp GCCACCATAACCCAAGTATTCAGCTGGCAGGTGGGCTaGTCTGAAGGGTCTGTGATGGCTTCACTCACATGT +
Preference number: 6 (lower is better)
Translates to: ATITQVFSWQVG*SEGSVMASLTC
Trigger: ACATGTGAGTGAAGCCATCACAGACCCTTCAGACCAGCCCACCTGCCAGCTGAATACTTGGGTTATGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597775.1
CDS CCA 72 bp TATGTCTGGATGGCCACCATAACCCAAGTATTCAGCTaGCAGGTGGGCTGGTCTGAAGGGTCTGTGATGGCT +
Preference number: 6 (lower is better)
Translates to: YVWMATITQVFS*QVGWSEGSVMA
Trigger: AGCCATCACAGACCCTTCAGACCAGCCCACCTGCCAGCTGAATACTTGGGTTATGGTGGCCATCCAGACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597775.1
CDS CCA 72 bp AACCTTGGTAAAAATGGCCTGAGCAAGAGCAGGGAATaGGGGACTTCATCTCCAGCCCGCATCCTGAGAAGG +
Preference number: 6 (lower is better)
Translates to: NLGKNGLSKSRE*GTSSPARILRR
Trigger: CCTTCTCAGGATGCGGGCTGGAGATGAAGTCCCCCATTCCCTGCTCTTGCTCAGGCCATTTTTACCAAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669285.1
CDS CAA 90 bp CTTCACCAGGCACGCCCTCCATGCTCCTATCTAAGCATTCCCTCCTaGAGTCTCTCTAGACTGAGTCACATCCTTTCCCCACTGCTATGG +
Preference number: 6 (lower is better)
Translates to: LHQARPPCSYLSIPS*SLSRLSHILSPLLW
Trigger: CCATAGCAGTGGGGAAAGGATGTGACTCAGTCTAGAGAGACTCAAGGAGGGAATGCTTAGATAGGAGCATGGAGGGCGTGCCTGGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000432154.5
ENST00000593326.6
ENST00000626476.3
ENST00000654490.1
ENST00000658493.1
ENST00000663517.1
ENST00000668599.1
ENST00000670206.1
CDS CAA 90 bp ATCAGAGACCAGACTAGATCTGAGGTGCTTTTCAGAACCCTGAAGTaGCCCCAGTGGGTCCAAGAAGGCCACGTGGTGGACAAGCTTGGT +
Preference number: 6 (lower is better)
Translates to: IRDQTRSEVLFRTLK*PQWVQEGHVVDKLG
Trigger: ACCAAGCTTGTCCACCACGTGGCCTTCTTGGACCCACTGGGGCAACTTCAGGGTTCTGAAAAGCACCTCAGATCTAGTCTGGTCTCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS CAA 90 bp CCAAAGTCCGTACTCATGCTGACGCAGGACAGGCAAGCCCCAAAATaGAGGCTTAGCCCAGGAGGGTTCTTGGCTTCATCCAGGAAGAAT +
Preference number: 6 (lower is better)
Translates to: PKSVLMLTQDRQAPK*RLSPGGFLASSRKN
Trigger: ATTCTTCCTGGATGAAGCCAAGAACCCTCCTGGGCTAAGCCTCAATTTTGGGGCTTGCCTGTCCTGCGTCAGCATGAGTACGGACTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000662513.1
ENST00000665355.1
ENST00000666539.1
CDS TCA 72 bp TGGCCAGAGTGGTTGCAGTGGAGACTGCTGGAAGGTTaGGTCAAGAGCATCTCTGCAATGGATGTGGCATGT +
Preference number: 6 (lower is better)
Translates to: WPEWLQWRLLEG*VKSISAMDVAC
Trigger: ACATGCCACATCCATTGCAGAGATGCTCTTGACTCAACCTTCCAGCAGTCTCCACTGCAACCACTCTGGCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS CCA 72 bp GATCAGAGAACCTATCCATACATGGTCTCTCCAGCCTaGTGGCCTCAGGGCAGTTGGACTTCTTACACAGCA +
Preference number: 6 (lower is better)
Translates to: DQRTYPYMVSPA*WPQGSWTSYTA
Trigger: TGCTGTGTAAGAAGTCCAACTGCCCTGAGGCCACCAGGCTGGAGAGACCATGTATGGATAGGTTCTCTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593326.6
ENST00000597775.1
ENST00000656099.1
CDS CCA 72 bp TTATTTCTGGGAAACGAAGGAGTAAAGGAGTCTCTGTaGTCAGTCACCCAACACGCGTTGGTGGCCGTGCCA +
Preference number: 6 (lower is better)
Translates to: LFLGNEGVKESL*SVTQHALVAVP
Trigger: TGGCACGGCCACCAACGCGTGTTGGGTGACTGACCACAGAGACTCCTTTACTCCTTCGTTTCCCAGAAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665835.1
CDS CCA 72 bp CTGTTCCAAGGACAAGTATTCAGCTGGCAGGTGGGCTaGTCTGAAGGGTCTGTGATGGCTTCACTCACATGT +
Preference number: 6 (lower is better)
Translates to: LFQGQVFSWQVG*SEGSVMASLTC
Trigger: ACATGTGAGTGAAGCCATCACAGACCCTTCAGACCAGCCCACCTGCCAGCTGAATACTTGTCCTTGGAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668675.1
CDS CAA 72 bp GCACGCCCTCCATGCTCCTATCTAAGCATTCCCTCCTaGAGTCTCTCTAGACTGAGTCACATCCTTTCCCCA +
Preference number: 6 (lower is better)
Translates to: ARPPCSYLSIPS*SLSRLSHILSP
Trigger: TGGGGAAAGGATGTGACTCAGTCTAGAGAGACTCAAGGAGGGAATGCTTAGATAGGAGCATGGAGGGCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000432154.5
ENST00000593326.6
ENST00000626476.3
ENST00000654490.1
ENST00000658493.1
ENST00000663517.1
ENST00000668599.1
ENST00000670206.1
CDS CAA 72 bp TTGGCCAGAGTGGTTGCAGTGGAGACTGCTGGAAGGTaGAGTCAAGAGCATCTCTGCAATGGATGTGGCATG +
Preference number: 6 (lower is better)
Translates to: LARVVAVETAGR*SQEHLCNGCGM
Trigger: CATGCCACATCCATTGCAGAGATGCTCTTGACTCAACCTTCCAGCAGTCTCCACTGCAACCACTCTGGCCAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS CAA 90 bp AACCTATCCATACATGGTCTCTCCAGCCTGGTGGCCTCAGGGCAGTaGGACTTCTTACACAGCAGGTCAGTGTTTCTGATCCTGCCTCAT +
Preference number: 6 (lower is better)
Translates to: NLSIHGLSSLVASGQ*DFLHSRSVFLILPH
Trigger: ATGAGGCAGGATCAGAAACACTGACCTGCTGTGTAAGAAGTCCAACTGCCCTGAGGCCACCAGGCTGGAGAGACCATGTATGGATAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593326.6
ENST00000597775.1
CDS CAA 90 bp GTAAACCCAACCCAACCATTTGGAAGCTGTGTGATTCTGAGGAAGTaGTTAAACCTCTCTGGGCCTTCTTTGGTGCCGGTTTGGGGGCGA +
Preference number: 6 (lower is better)
Translates to: VNPTQPFGSCVILRK*LNLSGPSLVPVWGR
Trigger: TCGCCCCCAAACCGGCACCAAAGAAGGCCCAGAGAGGTTTAACAACTTCCTCAGAATCACACAGCTTCCAAATGGTTGGGTTGGGTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000601524.5
ENST00000601913.2
ENST00000610423.4
ENST00000620876.4
ENST00000625668.3
ENST00000625879.2
ENST00000656867.1
ENST00000659267.1
ENST00000660359.1
ENST00000665835.1
ENST00000668727.1
CDS CAA 90 bp AACCTATCCATACATGGTCTCTCCAGCCTGGTGGCCTCAGGGCAGTaGGACTTCTTACACAGCAGGTCAGTGCTCCAAAAACAAGTACAC +
Preference number: 6 (lower is better)
Translates to: NLSIHGLSSLVASGQ*DFLHSRSVLQKQVH
Trigger: GTGTACTTGTTTTTGGAGCACTGACCTGCTGTGTAAGAAGTCCAACTGCCCTGAGGCCACCAGGCTGGAGAGACCATGTATGGATAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656099.1
CDS CAA 90 bp GGTGATGGCTCACGAAATGGAGCTGCAGAATCTGTCCTCCCCCTCTaGTATCTCTCCTGGCTGCCAACAGAAAGACTCCTGTTCTATAAG +
Preference number: 6 (lower is better)
Translates to: GDGSRNGAAESVLPL*YLSWLPTERLLFYK
Trigger: CTTATAGAACAGGAGTCTTTCTGTTGGCAGCCAGGAGAGATACAAGAGGGGGAGGACAGATTCTGCAGCTCCATTTCGTGAGCCATCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669285.1
CDS TCA 72 bp CTTCCAGATTTCCCAGCGTTTCCTTCTCCACTTTCTTaGGGTTCGTGGCTTGCAAAGGTTAGGAGCACTGGC +
Preference number: 6 (lower is better)
Translates to: LPDFPAFPSPLS*GSWLAKVRSTG
Trigger: GCCAGTGCTCCTAACCTTTGCAAGCCACGAACCTCAAGAAAGTGGAGAAGGAAACGCTGGGAAATCTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 37 transcripts:
ENST00000432154.5
ENST00000443776.6
ENST00000593326.6
ENST00000598535.6
ENST00000599735.3
ENST00000601524.5
ENST00000601913.2
ENST00000609015.6
ENST00000609304.5
ENST00000609933.3
ENST00000610423.4
ENST00000620876.4
ENST00000622169.5
ENST00000625668.3
ENST00000625879.2
ENST00000626476.3
ENST00000627909.2
ENST00000629693.1
ENST00000630262.2
ENST00000630484.2
ENST00000654490.1
ENST00000654593.1
ENST00000656867.1
ENST00000658493.1
ENST00000659267.1
ENST00000660052.1
ENST00000660199.1
ENST00000660359.1
ENST00000663517.1
ENST00000665835.1
ENST00000666958.1
ENST00000667864.1
ENST00000668599.1
ENST00000668727.1
ENST00000669236.1
ENST00000669285.1
ENST00000670206.1
CDS TCA 72 bp GTGAGAAAAACCTGTAATCTCAGCTACTCGGGAGGCTaGGGCAGAAGAATCGCTTCAACCCTGGAGACAGAG +
Preference number: 6 (lower is better)
Translates to: VRKTCNLSYSGG*GRRIASTLETE
Trigger: CTCTGTCTCCAGGGTTGAAGCGATTCTTCTGCCTCAGCCTCCCGAGTAGCTGAGATTACAGGTTTTTCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS GCA 72 bp AGGGGGAATCAATACAACAGTGCTGGTCATTCTGTCTaGAACAACTGGCCAGGTGCCTGGGAATGGGAATAC +
Preference number: 6 (lower is better)
Translates to: RGNQYNSAGHSV*NNWPGAWEWEY
Trigger: GTATTCCCATTCCCAGGCACCTGGCCAGTTGTTGCAGACAGAATGACCAGCACTGTTGTATTGATTCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS CCA 72 bp TGCATGACTGTTTCCATGTGGCATGACAGCTGCATGTaGAGATATCGAATTTCCCGTGAGGCTGACCTCCCA +
Preference number: 6 (lower is better)
Translates to: CMTVSMWHDSCM*RYRISREADLP
Trigger: TGGGAGGTCAGCCTCACGGGAAATTCGATATCTCCACATGCAGCTGTCATGCCACATGGAAACAGTCATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593326.6
ENST00000598535.6
ENST00000627894.1
ENST00000670206.1
CDS CAA 72 bp TCAGGCACATTGGTGGACATGGCTAGAAGGCTGGGCTaGATGGCTAGAAGGCTGGGCTTGATAGAAACTGTT +
Preference number: 6 (lower is better)
Translates to: SGTLVDMARRLG*MARRLGLIETV
Trigger: AACAGTTTCTATCAAGCCCAGCCTTCTAGCCATCAAGCCCAGCCTTCTAGCCATGTCCACCAATGTGCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593326.6
ENST00000597775.1
ENST00000656099.1
ENST00000668675.1
CDS CAA 90 bp CTGTTCCAAGGACGAAATGGAGCTGCAGAATCTGTCCTCCCCCTCTaGTATCTCTCCTGGCTGCCAACAGAAAGACTCCTGTTCTATAAG +
Preference number: 6 (lower is better)
Translates to: LFQGRNGAAESVLPL*YLSWLPTERLLFYK
Trigger: CTTATAGAACAGGAGTCTTTCTGTTGGCAGCCAGGAGAGATACAAGAGGGGGAGGACAGATTCTGCAGCTCCATTTCGTCCTTGGAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420947.3
ENST00000625668.3
ENST00000660052.1
CDS CAA 90 bp GTAAACCCAACCCAACCATTTGGAAGCTGTGTGATTCTGAGGAAGTaGTTAAACCTCTCTGGGCCTTCTTTGGTGCCTCCCAGAGCCTCT +
Preference number: 6 (lower is better)
Translates to: VNPTQPFGSCVILRK*LNLSGPSLVPPRAS
Trigger: AGAGGCTCTGGGAGGCACCAAAGAAGGCCCAGAGAGGTTTAACAACTTCCTCAGAATCACACAGCTTCCAAATGGTTGGGTTGGGTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000443776.6
ENST00000609015.6
ENST00000622169.5
ENST00000630262.2
ENST00000630484.2
ENST00000654593.1
ENST00000660052.1
ENST00000666958.1
ENST00000669285.1
CDS CAA 90 bp AGCTGTGTGATTCTGAGGAAGTTGTTAAACCTCTCTGGGCCTTCTTaGGTGCCGGTTTGGGGGCGAATATCAGGAAGGAGATTTAGCCCT +
Preference number: 6 (lower is better)
Translates to: SCVILRKLLNLSGPS*VPVWGRISGRRFSP
Trigger: AGGGCTAAATCTCCTTCCTGATATTCGCCCCCAAACCGGCACCAAAGAAGGCCCAGAGAGGTTTAACAACTTCCTCAGAATCACACAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000601524.5
ENST00000601913.2
ENST00000610423.4
ENST00000620876.4
ENST00000625668.3
ENST00000625879.2
ENST00000656867.1
ENST00000659267.1
ENST00000660359.1
ENST00000665835.1
ENST00000668727.1
CDS TCA 72 bp ACCCGTTTCCATCTGTTTGCATGGACCAGAGCCACTTaGGATAGGGCCTTCCTAGGAATAGAAGGTAAGACC +
Preference number: 6 (lower is better)
Translates to: TRFHLFAWTRAT*DRAFLGIEGKT
Trigger: GGTCTTACCTTCTATTCCTAGGAAGGCCCTATCTCAAGTGGCTCTGGTCCATGCAAACAGATGGAAACGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000449350.6
ENST00000654593.1
ENST00000656099.1
ENST00000656867.1
ENST00000657966.1
ENST00000659267.1
ENST00000660199.1
ENST00000660282.1
ENST00000665355.1
ENST00000666958.1
ENST00000668599.1
ENST00000668675.1
ENST00000669236.1
CDS CCA 72 bp AAGCTGTGTGATTCTGAGGAAGTTGTTAAACCTCTCTaGGCCTTCTTTGGTGCCGGTTTGGGGGCGAATATC +
Preference number: 6 (lower is better)
Translates to: KLCDSEEVVKPL*AFFGAGLGANI
Trigger: GATATTCGCCCCCAAACCGGCACCAAAGAAGGCCCAGAGAGGTTTAACAACTTCCTCAGAATCACACAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000601524.5
ENST00000601913.2
ENST00000610423.4
ENST00000620876.4
ENST00000625668.3
ENST00000625879.2
ENST00000656867.1
ENST00000659267.1
ENST00000660359.1
ENST00000665835.1
ENST00000668727.1
CDS CAA 90 bp AATGACTGCTGCATTGATCTCTGTGCCACTCAGGCCAGGGCATCCTaGTGGGGAGGATTCCAGTCTGCATTGCATCAAATACCTAGTATA +
Preference number: 6 (lower is better)
Translates to: NDCCIDLCATQARAS*WGGFQSALHQIPSI
Trigger: TATACTAGGTATTTGATGCAATGCAGACTGGAATCCTCCCCACAAGGATGCCCTGGCCTGAGTGGCACAGAGATCAATGCAGCAGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000449350.6
ENST00000654593.1
ENST00000656099.1
ENST00000656867.1
ENST00000657966.1
ENST00000659267.1
ENST00000660199.1
ENST00000660282.1
ENST00000665355.1
ENST00000666958.1
ENST00000668599.1
ENST00000668675.1
ENST00000669236.1
CDS CAA 90 bp GTGGACATGGCTAGAAGGCTGGGCTTGATGGCTAGAAGGCTGGGCTaGATAGAAACTGTTGATCAGAGAACCTATCCATACATGGTCTCT +
Preference number: 6 (lower is better)
Translates to: VDMARRLGLMARRLG*IETVDQRTYPYMVS
Trigger: AGAGACCATGTATGGATAGGTTCTCTGATCAACAGTTTCTATCAAGCCCAGCCTTCTAGCCATCAAGCCCAGCCTTCTAGCCATGTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593326.6
ENST00000597775.1
ENST00000656099.1
ENST00000668675.1
CDS TCA 72 bp ACAGAAAGACTCCTGTTCTATAAGCCAGCAGCTTCATaGGGTCTGAAAATAATCCCTCAGCCAAGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: TERLLFYKPAAS*GLKIIPQPSQG
Trigger: GCCCTGGCTTGGCTGAGGGATTATTTTCAGACCTCATGAAGCTGCTGGCTTATAGAACAGGAGTCTTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420947.3
ENST00000660052.1
ENST00000669285.1
CDS GCA 72 bp CCTCAGGGCAGTTGGACTTCTTACACAGCAGGTCAGTaGTCCAAAAACAAGTACACAGTGAACAAGCTGGAA +
Preference number: 6 (lower is better)
Translates to: PQGSWTSYTAGQ*SKNKYTVNKLE
Trigger: TTCCAGCTTGTTCACTGTGTACTTGTTTTTGGAGCACTGACCTGCTGTGTAAGAAGTCCAACTGCCCTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656099.1
CDS GCA 72 bp ACAGAGATCTGTGGGGGTGATTGGAAGGAAGAGAGTTaGCCCTTGACCTGTGGAAATACTGTTCAAACCCTT +
Preference number: 6 (lower is better)
Translates to: TEICGGDWKEES*PLTCGNTVQTL
Trigger: AAGGGTTTGAACAGTATTTCCACAGGTCAAGGGGCAACTCTCTTCCTTCCAATCACCCCCACAGATCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000669285.1
CDS CCA 72 bp TTTCAACGTATTGAGGGGGAATCAATACAACAGTGCTaGTCATTCTGTCTGCAACAACTGGCCAGGTGCCTG +
Preference number: 6 (lower is better)
Translates to: FQRIEGESIQQC*SFCLQQLARCL
Trigger: CAGGCACCTGGCCAGTTGTTGCAGACAGAATGACCAGCACTGTTGTATTGATTCCCCCTCAATACGTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS CCA 72 bp CCAGGCACTACCATATCCATAATCTCCTCTGAGACTTaGAAACCAAGCTGGGGCCAGGTTACAAATGACTTC +
Preference number: 6 (lower is better)
Translates to: PGTTISIISSET*KPSWGQVTNDF
Trigger: GAAGTCATTTGTAACCTGGCCCCAGCTTGGTTTCCAAGTCTCAGAGGAGATTATGGATATGGTAGTGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000449350.6
ENST00000654593.1
ENST00000656099.1
ENST00000656867.1
ENST00000657966.1
ENST00000659267.1
ENST00000660199.1
ENST00000660282.1
ENST00000661206.1
ENST00000665355.1
ENST00000666958.1
ENST00000668599.1
ENST00000668675.1
ENST00000668727.1
ENST00000669236.1
CDS CCA 72 bp TGGTGTCTTCATAAGAACAGACTTGCTCTCTCTCTGTaGTCACATGACGACACAGTGAGCAGACAGCCTTCT +
Preference number: 6 (lower is better)
Translates to: WCLHKNRLALSL*SHDDTVSRQPS
Trigger: AGAAGGCTGTCTGCTCACTGTGTCGTCATGTGACCACAGAGAGAGAGCAAGTCTGTTCTTATGAAGACACCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663517.1
CDS CAA 72 bp GCTAGAAGGCTGGGCTTGATGGCTAGAAGGCTGGGCTaGATAGAAACTGTTGATCAGAGAACCTATCCATAC +
Preference number: 6 (lower is better)
Translates to: ARRLGLMARRLG*IETVDQRTYPY
Trigger: GTATGGATAGGTTCTCTGATCAACAGTTTCTATCAAGCCCAGCCTTCTAGCCATCAAGCCCAGCCTTCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593326.6
ENST00000597775.1
ENST00000656099.1
ENST00000668675.1
CDS CAA 72 bp GTCCACAGCATTCAGTGGATGACATGCTGTACAAGTTaGTGGCCTGGGAGCAATAGGCTGTACAATATAGCC +
Preference number: 6 (lower is better)
Translates to: VHSIQWMTCCTS*WPGSNRLYNIA
Trigger: GGCTATATTGTACAGCCTATTGCTCCCAGGCCACAAACTTGTACAGCATGTCATCCACTGAATGCTGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609304.5
ENST00000609933.3
CDS CAA 72 bp ATCTGTGGGGGTGATTGGAAGGAAGAGAGTTGCCCCTaGACCTGTGGAAATACTGTTCAAACCCTTACTCTG +
Preference number: 6 (lower is better)
Translates to: ICGGDWKEESCP*TCGNTVQTLTL
Trigger: CAGAGTAAGGGTTTGAACAGTATTTCCACAGGTCAAGGGGCAACTCTCTTCCTTCCAATCACCCCCACAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669285.1
CDS CAA 90 bp GTAAACCCAACCCAACCATTTGGAAGCTGTGTGATTCTGAGGAAGTaGTTAAACCTCTCTGGGCCTTCTTTGGTGCCTATTTCCCACGAG +
Preference number: 6 (lower is better)
Translates to: VNPTQPFGSCVILRK*LNLSGPSLVPISHE
Trigger: CTCGTGGGAAATAGGCACCAAAGAAGGCCCAGAGAGGTTTAACAACTTCCTCAGAATCACACAGCTTCCAAATGGTTGGGTTGGGTTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000432154.5
ENST00000593326.6
ENST00000626476.3
ENST00000629693.1
ENST00000654490.1
ENST00000658493.1
ENST00000663517.1
ENST00000667864.1
ENST00000668599.1
ENST00000670206.1
CDS CAA 90 bp GTAAACCCAACCCAACCATTTGGAAGCTGTGTGATTCTGAGGAAGTaGTTAAACCTCTCTGGGCCTTCTTTGGTGCCTGTTAGGCAGAAA +
Preference number: 6 (lower is better)
Translates to: VNPTQPFGSCVILRK*LNLSGPSLVPVRQK
Trigger: TTTCTGCCTAACAGGCACCAAAGAAGGCCCAGAGAGGTTTAACAACTTCCTCAGAATCACACAGCTTCCAAATGGTTGGGTTGGGTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599735.3
CDS CAA 90 bp GGTGGGCTTCCTGGAGGCATGATTAAGTACTTCTTCTGTGACCATTaGCTAAGTGCTGGGGCAGAGTTGAAATTCAAATCCTTCTGGCTT +
Preference number: 6 (lower is better)
Translates to: GGLPGGMIKYFFCDH*LSAGAELKFKSFWL
Trigger: AAGCCAGAAGGATTTGAATTTCAACTCTGCCCCAGCACTTAGCAAATGGTCACAGAAGAAGTACTTAATCATGCCTCCAGGAAGCCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665835.1
CDS CAA 90 bp CTGAGAAGGAGGAAGCCTCTGTGCTTTGGAAGCATTTATAAGACTTaGTGTAACCAAGGGCCACCCTTGAGGTTTCCTTGCCTTATTGCT +
Preference number: 6 (lower is better)
Translates to: LRRRKPLCFGSIYKT*CNQGPPLRFPCLIA
Trigger: AGCAATAAGGCAAGGAAACCTCAAGGGTGGCCCTTGGTTACACAAAGTCTTATAAATGCTTCCAAAGCACAGAGGCTTCCTCCTTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669285.1
CDS TCA 72 bp TGCATTTCCCAGAACGTATCCCCATCCTGTTATTGGTaGACCCATTTTACAGAAGCGGGTTCAGCACAGTCA +
Preference number: 6 (lower is better)
Translates to: CISQNVSPSCYW*THFTEAGSAQS
Trigger: TGACTGTGCTGAACCCGCTTCTGTAAAATGGGTTCACCAATAACAGGATGGGGATACGTTCTGGGAAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609933.3
CDS GCA 72 bp CAGTGCTGGTCATTCTGTCTGCAACAACTGGCCAGGTaGCTGGGAATGGGAATACTTCATTTCTCTTACTTT +
Preference number: 6 (lower is better)
Translates to: QCWSFCLQQLAR*LGMGILHFSYF
Trigger: AAAGTAAGAGAAATGAAGTATTCCCATTCCCAGGCACCTGGCCAGTTGTTGCAGACAGAATGACCAGCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS GCA 72 bp CTTTTTCAACGTATTGAGGGGGAATCAATACAACAGTaGTGGTCATTCTGTCTGCAACAACTGGCCAGGTGC +
Preference number: 6 (lower is better)
Translates to: LFQRIEGESIQQ*WSFCLQQLARC
Trigger: GCACCTGGCCAGTTGTTGCAGACAGAATGACCAGCACTGTTGTATTGATTCCCCCTCAATACGTTGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS CCA 72 bp AAGCTGTGTGATTCTGAGGAAGTTGTTAAACCTCTCTaGGCCTTCTTTGGTGCCTATTTCCCACGAGCACAT +
Preference number: 6 (lower is better)
Translates to: KLCDSEEVVKPL*AFFGAYFPRAH
Trigger: ATGTGCTCGTGGGAAATAGGCACCAAAGAAGGCCCAGAGAGGTTTAACAACTTCCTCAGAATCACACAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000432154.5
ENST00000593326.6
ENST00000626476.3
ENST00000629693.1
ENST00000654490.1
ENST00000658493.1
ENST00000663517.1
ENST00000667864.1
ENST00000668599.1
ENST00000670206.1
CDS CCA 72 bp GCTGGTCATTCTGTCTGCAACAACTGGCCAGGTGCCTaGGAATGGGAATACTTCATTTCTCTTACTTTCCTT +
Preference number: 6 (lower is better)
Translates to: AGHSVCNNWPGA*EWEYFISLTFL
Trigger: AAGGAAAGTAAGAGAAATGAAGTATTCCCATTCCCAGGCACCTGGCCAGTTGTTGCAGACAGAATGACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS CCA 72 bp CAATACAACAGTGCTGGTCATTCTGTCTGCAACAACTaGCCAGGTGCCTGGGAATGGGAATACTTCATTTCT +
Preference number: 6 (lower is better)
Translates to: QYNSAGHSVCNN*PGAWEWEYFIS
Trigger: AGAAATGAAGTATTCCCATTCCCAGGCACCTGGCCAGTTGTTGCAGACAGAATGACCAGCACTGTTGTATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS CCA 72 bp AAGCTGTGTGATTCTGAGGAAGTTGTTAAACCTCTCTaGGCCTTCTTTGGTGCCAAAGGCCTAGCCAAAGAT +
Preference number: 6 (lower is better)
Translates to: KLCDSEEVVKPL*AFFGAKGLAKD
Trigger: ATCTTTGGCTAGGCCTTTGGCACCAAAGAAGGCCCAGAGAGGTTTAACAACTTCCTCAGAATCACACAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598535.6
ENST00000627909.2
ENST00000660199.1
ENST00000669236.1
CDS CAA 72 bp AGTGTGACTCCTCCAAAATCACTCTTGCTTCCAATTTaGTCTGCTGTTATGGAGGTCAGCAACTTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: SVTPPKSLLLPI*SAVMEVSNLGS
Trigger: GCTGCCCAAGTTGCTGACCTCCATAACAGCAGACAAAATTGGAAGCAAGAGTGATTTTGGAGGAGTCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622169.5
ENST00000666539.1
CDS CAA 72 bp CTCTGGAGGTCTTTTATGCCGATTTTACTGGCCTCGTaGAGAAGGCAGTTTCTTGACTTCTTGGCAAAGGGA +
Preference number: 6 (lower is better)
Translates to: LWRSFMPILLAS*RRQFLDFLAKG
Trigger: TCCCTTTGCCAAGAAGTCAAGAAACTGCCTTCTCAACGAGGCCAGTAAAATCGGCATAAAAGACCTCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000653573.1
CDS TCA 72 bp ACATTTAGCTTAGCACTCTCCCTTCCAACGTATTGGTaGCCCCCACTGTCCAGCAGAAATGAGTTTTCTAGA +
Preference number: 6 (lower is better)
Translates to: TFSLALSLPTYW*PPLSSRNEFSR
Trigger: TCTAGAAAACTCATTTCTGCTGGACAGTGGGGGTCACCAATACGTTGGAAGGGAGAGTGCTAAGCTAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000653573.1
CDS GCA 72 bp GTGTGTAGTAGGCCATACCATCCAGGTGTGTGTAAGTaGCCTCTATGGTGTGTTCACACAATGATGAAATCA +
Preference number: 6 (lower is better)
Translates to: VCSRPYHPGVCK*PLWCVHTMMKS
Trigger: TGATTTCATCATTGTGTGAACACACCATAGAGGGCACTTACACACACCTGGATGGTATGGCCTACTACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609304.5
ENST00000609933.3
CDS CAA 72 bp ACAATGCATTTCCCAGAACGTATCCCCATCCTGTTATaGGTGAACCCATTTTACAGAAGCGGGTTCAGCACA +
Preference number: 6 (lower is better)
Translates to: TMHFPERIPILL*VNPFYRSGFST
Trigger: TGTGCTGAACCCGCTTCTGTAAAATGGGTTCACCAATAACAGGATGGGGATACGTTCTGGGAAATGCATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609933.3
CDS CAA 90 bp GTAAACCCAACCCAACCATTTGGAAGCTGTGTGATTCTGAGGAAGTaGTTAAACCTCTCTGGGCCTTCTTTGGTGCCATTGAGTTATAAG +
Preference number: 6 (lower is better)
Translates to: VNPTQPFGSCVILRK*LNLSGPSLVPLSYK
Trigger: CTTATAACTCAATGGCACCAAAGAAGGCCCAGAGAGGTTTAACAACTTCCTCAGAATCACACAGCTTCCAAATGGTTGGGTTGGGTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609304.5
ENST00000609933.3
CDS CAA 90 bp CACTCAGCCTCTGGTGACATGTTTAAGGTGAATGAAACACTACCTTaGGTGTTAGTTGACACTGTGGTCGGAACAGTGATTTCTCCAAAC +
Preference number: 6 (lower is better)
Translates to: HSASGDMFKVNETLP*VLVDTVVGTVISPN
Trigger: GTTTGGAGAAATCACTGTTCCGACCACAGTGTCAACTAACACCAAAGGTAGTGTTTCATTCACCTTAAACATGTCACCAGAGGCTGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609304.5
CDS TCA 72 bp CCACATTTTGCAAAAATTTGCGCCATGTCACAGTTCTaGTTAGGTGCCAAGAGAACTATTTCCCAGGCCACA +
Preference number: 6 (lower is better)
Translates to: PHFAKICAMSQF*LGAKRTISQAT
Trigger: TGTGGCCTGGGAAATAGTTCTCTTGGCACCTAATCAGAACTGTGACATGGCGCAAATTTTTGCAAAATGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432154.5
CDS TCA 72 bp TGTCCTCTTCTTACAGTGAGAAAAACTTGCCATGTCTaGCTTCCAGATTTCCCAGCGTTTCCTTCTCCACTT +
Preference number: 6 (lower is better)
Translates to: CPLLTVRKTCHV*LPDFPAFPSPL
Trigger: AAGTGGAGAAGGAAACGCTGGGAAATCTGGAAGTCAGACATGGCAAGTTTTTCTCACTGTAAGAAGAGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000593326.6
ENST00000598535.6
ENST00000601913.2
ENST00000609015.6
ENST00000625668.3
ENST00000626476.3
ENST00000660359.1
ENST00000670206.1
CDS TCA 72 bp TTTGCGGAACAAGAATACTCTATATGCTGTGTGCCCTaGGTATCAGCTCAGAGGCAGTTCTGCACTCATATT +
Preference number: 6 (lower is better)
Translates to: FAEQEYSICCVP*VSAQRQFCTHI
Trigger: AATATGAGTGCAGAACTGCCTCTGAGCTGATACTCAGGGCACACAGCATATAGAGTATTCTTGTTCCGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665355.1
CDS CAA 72 bp ATTCTGAGGAAGTTGTTAAACCTCTCTGGGCCTTCTTaGGTGCCTATTTCCCACGAGCACATGCTTTTTGTA +
Preference number: 6 (lower is better)
Translates to: ILRKLLNLSGPS*VPISHEHMLFV
Trigger: TACAAAAAGCATGTGCTCGTGGGAAATAGGCACCAAAGAAGGCCCAGAGAGGTTTAACAACTTCCTCAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000432154.5
ENST00000593326.6
ENST00000626476.3
ENST00000629693.1
ENST00000654490.1
ENST00000658493.1
ENST00000663517.1
ENST00000667864.1
ENST00000668599.1
ENST00000670206.1
CDS CAA 72 bp AAGTTGTTAAACCTCTCTGGGCCTTCTTTGGTGCCATaGAGTTATAAGTGTCCACAGCATTCAGTGGATGAC +
Preference number: 6 (lower is better)
Translates to: KLLNLSGPSLVP*SYKCPQHSVDD
Trigger: GTCATCCACTGAATGCTGTGGACACTTATAACTCAATGGCACCAAAGAAGGCCCAGAGAGGTTTAACAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609304.5
ENST00000609933.3
CDS CAA 72 bp CCTGGAGGCATGATTAAGTACTTCTTCTGTGACCATTaGCTAAGTGCTGGGGCAGAGTTGAAATTCAAATCC +
Preference number: 6 (lower is better)
Translates to: PGGMIKYFFCDH*LSAGAELKFKS
Trigger: GGATTTGAATTTCAACTCTGCCCCAGCACTTAGCAAATGGTCACAGAAGAAGTACTTAATCATGCCTCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665835.1
CDS CAA 90 bp TGCTTTGGAAGCATTTATAAGACTTTGTGTAACCAAGGGCCACCCTaGAGGTTTCCTTGCCTTATTGCTCCCACATACCCTACTGAAAAA +
Preference number: 6 (lower is better)
Translates to: CFGSIYKTLCNQGPP*RFPCLIAPTYPTEK
Trigger: TTTTTCAGTAGGGTATGTGGGAGCAATAAGGCAAGGAAACCTCAAGGGTGGCCCTTGGTTACACAAAGTCTTATAAATGCTTCCAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669285.1
CDS TCA 72 bp CCACTTATTCTTCAGGATGAGCTGAGCTGTATTTCATaGGGATTGTTTGCTGTGGGTTTCAGTCATCCTGTA +
Preference number: 6 (lower is better)
Translates to: PLILQDELSCIS*GLFAVGFSHPV
Trigger: TACAGGATGACTGAAACCCACAGCAAACAATCCTCATGAAATACAGCTCAGCTCATCCTGAAGAATAAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593326.6
ENST00000627894.1
ENST00000670206.1
CDS GCA 72 bp AAGGATCAATGCATTTATCTGAGTCAAGTTCAACTTTaGACTCCAGTCCTTCAGGCAGGTAGAGAGGTATCT +
Preference number: 6 (lower is better)
Translates to: KDQCIYLSQVQL*TPVLQAGREVS
Trigger: AGATACCTCTCTACCTGCCTGAAGGACTGGAGTGCAAAGTTGAACTTGACTCAGATAAATGCATTGATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599735.3
CDS CAA 72 bp ATTCTGAGGAAGTTGTTAAACCTCTCTGGGCCTTCTTaGGTGCCATTGAGTTATAAGTGTCCACAGCATTCA +
Preference number: 6 (lower is better)
Translates to: ILRKLLNLSGPS*VPLSYKCPQHS
Trigger: TGAATGCTGTGGACACTTATAACTCAATGGCACCAAAGAAGGCCCAGAGAGGTTTAACAACTTCCTCAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609304.5
ENST00000609933.3
CDS CAA 90 bp TGGTACCCAGTGATAGTCTATCTTCATCATTCGTGGATTCCATATTaGCAAATGCACCTATTTGTAACCCCAAAGTCCGTACTCATGCTG +
Preference number: 6 (lower is better)
Translates to: WYPVIVYLHHSWIPY*QMHLFVTPKSVLML
Trigger: CAGCATGAGTACGGACTTTGGGGTTACAAATAGGTGCATTTGCAAATATGGAATCCACGAATGATGAAGATAGACTATCACTGGGTACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000662513.1
ENST00000665355.1
ENST00000666539.1
CDS CAA 90 bp GCAGAGTTGAAATTCAAATCCTTCTGGCTTAAGGACAACTTCATATaGCGTCTCATGAATGAGAGGATGACTGGTTCTTGGAGGTGTAAG +
Preference number: 6 (lower is better)
Translates to: AELKFKSFWLKDNFI*RLMNERMTGSWRCK
Trigger: CTTACACCTCCAAGAACCAGTCATCCTCTCATTCATGAGACGCAATATGAAGTTGTCCTTAAGCCAGAAGGATTTGAATTTCAACTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665835.1
CDS TCA 72 bp CCACTTATTCTTCAGGATGAGCTGAGCTGTATTTCATaGGGATTGTTTGCTGTGGGTTTCAGTCATCTTTCT +
Preference number: 6 (lower is better)
Translates to: PLILQDELSCIS*GLFAVGFSHLS
Trigger: AGAAAGATGACTGAAACCCACAGCAAACAATCCTCATGAAATACAGCTCAGCTCATCCTGAAGAATAAGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598535.6
CDS CCA 72 bp CTAAGTGCTGGGGCAGAGTTGAAATTCAAATCCTTCTaGCTTAAGGACAACTTCATATTGCGTCTCATGAAT +
Preference number: 6 (lower is better)
Translates to: LSAGAELKFKSF*LKDNFILRLMN
Trigger: ATTCATGAGACGCAATATGAAGTTGTCCTTAAGCCAGAAGGATTTGAATTTCAACTCTGCCCCAGCACTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000665835.1
CDS CAA 72 bp TCTGGTGACATGTTTAAGGTGAATGAAACACTACCTTaGGTGTTAGTTGACACTGTGGTCGGAACAGTGATT +
Preference number: 6 (lower is better)
Translates to: SGDMFKVNETLP*VLVDTVVGTVI
Trigger: AATCACTGTTCCGACCACAGTGTCAACTAACACCAAAGGTAGTGTTTCATTCACCTTAAACATGTCACCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609304.5
CDS CAA 72 bp AAATTCAAATCCTTCTGGCTTAAGGACAACTTCATATaGCGTCTCATGAATGAGAGGATGACTGGTTCTTGG +
Preference number: 6 (lower is better)
Translates to: KFKSFWLKDNFI*RLMNERMTGSW
Trigger: CCAAGAACCAGTCATCCTCTCATTCATGAGACGCAATATGAAGTTGTCCTTAAGCCAGAAGGATTTGAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665835.1
CDS CAA 72 bp GTGATAGTCTATCTTCATCATTCGTGGATTCCATATTaGCAAATGCACCTATTTGTAACCCCAAAGTCCGTA +
Preference number: 6 (lower is better)
Translates to: VIVYLHHSWIPY*QMHLFVTPKSV
Trigger: TACGGACTTTGGGGTTACAAATAGGTGCATTTGCAAATATGGAATCCACGAATGATGAAGATAGACTATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000662513.1
ENST00000665355.1
ENST00000666539.1
CDS TCA 72 bp TTCGAGATATGTCTAGAAGCTGTTTTCTCAGCACCTTaGAAATCTATGGGAGATCTTCCTTCTTGTTTTAAG +
Preference number: 6 (lower is better)
Translates to: FEICLEAVFSAP*KSMGDLPSCFK
Trigger: CTTAAAACAAGAAGGAAGATCTCCCATAGATTTTCAAGGTGCTGAGAAAACAGCTTCTAGACATATCTCGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593326.6