Pregenerated sensors for LINC02027 (Homo sapiens)
Ensembl gene IDs: ENSG00000243694Ensembl transcript IDs: ENST00000482617.1, ENST00000653347.1, ENST00000662919.1, ENST00000666491.1, ENST00000666975.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AAGCACTCCCCGTCACCGAGAGCAGTGATTGGCTCTGTTCTTAGCTaGCTTGACAGAAAGGCCAGGGATTCAATGAACATTGAAGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: KHSPSPRAVIGSVLS*LDRKARDSMNIEAG Trigger: TCCAGCTTCAATGTTCATTGAATCCCTGGCCTTTCTGTCAAGGCAGCTAAGAACAGAGCCAATCACTGCTCTCGGTGACGGGGAGTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653347.1 ENST00000662919.1 |
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| CDS CCA 90 bp | AGCTGTCACATGTTTCTAGTATCCTTCTCTACCCTAAGCTTACACTaGAGCTCAACGGGGGCTTTGCTGGATGGCTCCTGTACACGTCTA | + |
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Preference number: 5 (lower is better) Translates to: SCHMFLVSFSTLSLH*SSTGALLDGSCTRL Trigger: TAGACGTGTACAGGAGCCATCCAGCAAAGCCCCCGTTGAGCTCCAGTGTAAGCTTAGGGTAGAGAAGGATACTAGAAACATGTGACAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662919.1 |
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| CDS CCA 90 bp | ATGGCTGAAAGGACTGCTAATGGGATGTGTGAAGCCTTTCTTTTCTaGGTCAGCAGTCTGAATCCAGGCCGGGTCAGTAGAACCCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: MAERTANGMCEAFLF*VSSLNPGRVSRTQK Trigger: TTTTTGGGTTCTACTGACCCGGCCTGGATTCAGACTGCTGACCCAGAAAAGAAAGGCTTCACACATCCCATTAGCAGTCCTTTCAGCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653347.1 ENST00000662919.1 |
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| CDS CCA 90 bp | CATGGAGCTCTGCATGACATGCTTCAACCTAAGAGTAAAATGCCGTaGCCAAGTTATAACCCCTGTATGCGTAAGTTCATCATCGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: HGALHDMLQPKSKMP*PSYNPCMRKFIIAA Trigger: TGCTGCGATGATGAACTTACGCATACAGGGGTTATAACTTGGCCACGGCATTTTACTCTTAGGTTGAAGCATGTCATGCAGAGCTCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000653347.1 ENST00000662919.1 ENST00000666975.1 |
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| CDS CCA 90 bp | TCGGTTTTCATATTACATTGGTTATCAGAGGATAGGACAATAATGTaGGCATTCTCATCGCAGTCCACTCCATCAGTGTCAGTGCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: SVFILHWLSEDRTIM*AFSSQSTPSVSVLA Trigger: AGCCAGCACTGACACTGATGGAGTGGACTGCGATGAGAATGCCCACATTATTGTCCTATCCTCTGATAACCAATGTAATATGAAAACCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000482617.1 ENST00000653347.1 ENST00000662919.1 ENST00000666491.1 ENST00000666975.1 |
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| CDS CCA 90 bp | GAGTTTGAAAGTGTAAAACGAGTGGGAATTTCAGCTGTGAAGCTGTaGGATATTCTTGCTGGGAAGGCTAGTTGGAACAGAAAGCATGAA | + |
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Preference number: 5 (lower is better) Translates to: EFESVKRVGISAVKL*DILAGKASWNRKHE Trigger: TTCATGCTTTCTGTTCCAACTAGCCTTCCCAGCAAGAATATCCCACAGCTTCACAGCTGAAATTCCCACTCGTTTTACACTTTCAAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666491.1 |
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| CDS GCA 90 bp | GGATTTCAAAGAAGCTTATCAAAAATTGCGTTTGGCATGGAGCTCTaGATGACATGCTTCAACCTAAGAGTAAAATGCCGTGGCCAAGTT | + |
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Preference number: 5 (lower is better) Translates to: GFQRSLSKIAFGMEL*MTCFNLRVKCRGQV Trigger: AACTTGGCCACGGCATTTTACTCTTAGGTTGAAGCATGTCATGCAGAGCTCCATGCCAAACGCAATTTTTGATAAGCTTCTTTGAAATCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000653347.1 ENST00000662919.1 ENST00000666975.1 |
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| CDS TCA 90 bp | ACCACCCTTTTATTGGCTTTCTTCCGTCTCCATGTCACCACTTCATaGTTTCGTTGTGCTTCTGGAATCACTTCTCATATAAGCAAATTG | + |
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Preference number: 5 (lower is better) Translates to: TTLLLAFFRLHVTTS*FRCASGITSHISKL Trigger: CAATTTGCTTATATGAGAAGTGATTCCAGAAGCACAACGAAATCATGAAGTGGTGACATGGAGACGGAAGAAAGCCAATAAAAGGGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662919.1 |
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| CDS TCA 90 bp | CTGCAGAATCTTTCATCAATCTGTGTTACAGTCACAGGTTTGCTGTaGGGAATGGTAGACATGGAATTCCAGGCCTCAGATTTCTTTTAT | + |
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Preference number: 5 (lower is better) Translates to: LQNLSSICVTVTGLL*GMVDMEFQASDFFY Trigger: ATAAAAGAAATCTGAGGCCTGGAATTCCATGTCTACCATTCCTCACAGCAAACCTGTGACTGTAACACAGATTGATGAAAGATTCTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666975.1 |
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| CDS GCA 90 bp | ATTGGCTTTCTTCCGTCTCCATGTCACCACTTCATGATTTCGTTGTaGTTCTGGAATCACTTCTCATATAAGCAAATTGTACCCATATTC | + |
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Preference number: 5 (lower is better) Translates to: IGFLPSPCHHFMISL*FWNHFSYKQIVPIF Trigger: GAATATGGGTACAATTTGCTTATATGAGAAGTGATTCCAGAAGCACAACGAAATCATGAAGTGGTGACATGGAGACGGAAGAAAGCCAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662919.1 |
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| CDS CCA 90 bp | AATCTGTGTTACAGTCACCGTTTCATAGTAGGGCACAAATCTCCATaGTTGAAATCTGTAGTTCATTGGACTTTTCAGTGTGATATAAAA | + |
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Preference number: 5 (lower is better) Translates to: NLCYSHRFIVGHKSP*LKSVVHWTFQCDIK Trigger: TTTTATATCACACTGAAAAGTCCAATGAACTACAGATTTCAACCATGGAGATTTGTGCCCTACTATGAAACGGTGACTGTAACACAGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653347.1 |
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| CDS CCA 90 bp | GTGAACTTTAATGTTATTTGGCCTGATTCATTCAAACGCTATGCCTaGAAAGCTGCTGTTAAATTAGAGAAGTTACATCAAGGAACCAAA | + |
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Preference number: 5 (lower is better) Translates to: VNFNVIWPDSFKRYA*KAAVKLEKLHQGTK Trigger: TTTGGTTCCTTGATGTAACTTCTCTAATTTAACAGCAGCTTTCCAGGCATAGCGTTTGAATGAATCAGGCCAAATAACATTAAAGTTCAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653347.1 ENST00000662919.1 |
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| CDS TCA 90 bp | AAGGAGACTGGTAATTGTCAAAGCCATGGTGAAAGTTTTCTAAGGTaGCTGCTCATTGAGAAAATCAGCATGCTTATATATTCAAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: KETGNCQSHGESFLR*LLIEKISMLIYSKN Trigger: ATTCTTTGAATATATAAGCATGCTGATTTTCTCAATGAGCAGTCACCTTAGAAAACTTTCACCATGGCTTTGACAATTACCAGTCTCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666491.1 |
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| CDS TCA 72 bp | TGTCTGCAGCCAAGCACTCCCCGTCACCGAGAGCAGTaGTTGGCTCTGTTCTTAGCTGCCTTGACAGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: CLQPSTPRHREQ*LALFLAALTER Trigger: CCTTTCTGTCAAGGCAGCTAAGAACAGAGCCAATCACTGCTCTCGGTGACGGGGAGTGCTTGGCTGCAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653347.1 ENST00000662919.1 |
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| CDS CAA 72 bp | TCTACCCTAAGCTTACACTGGAGCTCAACGGGGGCTTaGCTGGATGGCTCCTGTACACGTCTATGGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: STLSLHWSSTGA*LDGSCTRLWLP Trigger: TGGAAGCCATAGACGTGTACAGGAGCCATCCAGCAAAGCCCCCGTTGAGCTCCAGTGTAAGCTTAGGGTAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662919.1 |
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| CDS CAA 90 bp | GTATCCTTCTCTACCCTAAGCTTACACTGGAGCTCAACGGGGGCTTaGCTGGATGGCTCCTGTACACGTCTATGGCTTCCACCTAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: VSFSTLSLHWSSTGA*LDGSCTRLWLPPKP Trigger: AGGCTTAGGTGGAAGCCATAGACGTGTACAGGAGCCATCCAGCAAAGCCCCCGTTGAGCTCCAGTGTAAGCTTAGGGTAGAGAAGGATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662919.1 |
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| CDS CAA 72 bp | TCTTCCAGAGGGCCCCACAGCAAGACTGAGCCCCAATaGCTCAGAGTGGTATTCCTCATTGTTTACCACCCT | + |
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Preference number: 6 (lower is better) Translates to: SSRGPHSKTEPQ*LRVVFLIVYHP Trigger: AGGGTGGTAAACAATGAGGAATACCACTCTGAGCAATTGGGGCTCAGTCTTGCTGTGGGGCCCTCTGGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662919.1 |
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| CDS CCA 72 bp | AGGACTGCTAATGGGATGTGTGAAGCCTTTCTTTTCTaGGTCAGCAGTCTGAATCCAGGCCGGGTCAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: RTANGMCEAFLF*VSSLNPGRVSR Trigger: TCTACTGACCCGGCCTGGATTCAGACTGCTGACCCAGAAAAGAAAGGCTTCACACATCCCATTAGCAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653347.1 ENST00000662919.1 |
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| CDS CCA 72 bp | ATGTTTCTAGTATCCTTCTCTACCCTAAGCTTACACTaGAGCTCAACGGGGGCTTTGCTGGATGGCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: MFLVSFSTLSLH*SSTGALLDGSC Trigger: ACAGGAGCCATCCAGCAAAGCCCCCGTTGAGCTCCAGTGTAAGCTTAGGGTAGAGAAGGATACTAGAAACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662919.1 |
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| CDS CAA 90 bp | CCCACAGCAAGACTGAGCCCCAATTGCTCAGAGTGGTATTCCTCATaGTTTACCACCCTTTTATTGGCTTTCTTCCGTCTCCATGTCACC | + |
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Preference number: 6 (lower is better) Translates to: PTARLSPNCSEWYSS*FTTLLLAFFRLHVT Trigger: GGTGACATGGAGACGGAAGAAAGCCAATAAAAGGGTGGTAAACAATGAGGAATACCACTCTGAGCAATTGGGGCTCAGTCTTGCTGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662919.1 |
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| CDS CCA 72 bp | AGGAGTAGTATACACTCCAGTGTTTGCCTCCTGGTTTaGCACCCTGAGGCGTTATCTAAAATGTCTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: RSSIHSSVCLLV*HPEALSKMSSR Trigger: TCTGGAAGACATTTTAGATAACGCCTCAGGGTGCCAAACCAGGAGGCAAACACTGGAGTGTATACTACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662919.1 |
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| CDS GCA 72 bp | GAGCTCTGCATGACATGCTTCAACCTAAGAGTAAAATaGCGTGGCCAAGTTATAACCCCTGTATGCGTAAGT | + |
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Preference number: 6 (lower is better) Translates to: ELCMTCFNLRVK*RGQVITPVCVS Trigger: ACTTACGCATACAGGGGTTATAACTTGGCCACGGCATTTTACTCTTAGGTTGAAGCATGTCATGCAGAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000653347.1 ENST00000662919.1 ENST00000666975.1 |
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| CDS CCA 72 bp | GGAAAGAAAGTCAGAATTGGATGGGGATGTCTTCAATaGCTGAAAGGACTGCTAATGGGATGTGTGAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: GKKVRIGWGCLQ*LKGLLMGCVKP Trigger: AGGCTTCACACATCCCATTAGCAGTCCTTTCAGCCATTGAAGACATCCCCATCCAATTCTGACTTTCTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653347.1 ENST00000662919.1 |
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| CDS CCA 72 bp | GTGAAGCTGTGGGATATTCTTGCTGGGAAGGCTAGTTaGAACAGAAAGCATGAACAAAGGAGCATCATAGTG | + |
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Preference number: 6 (lower is better) Translates to: VKLWDILAGKAS*NRKHEQRSIIV Trigger: CACTATGATGCTCCTTTGTTCATGCTTTCTGTTCCAACTAGCCTTCCCAGCAAGAATATCCCACAGCTTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666491.1 |
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| CDS CAA 72 bp | AGACTGAGCCCCAATTGCTCAGAGTGGTATTCCTCATaGTTTACCACCCTTTTATTGGCTTTCTTCCGTCTC | + |
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Preference number: 6 (lower is better) Translates to: RLSPNCSEWYSS*FTTLLLAFFRL Trigger: GAGACGGAAGAAAGCCAATAAAAGGGTGGTAAACAATGAGGAATACCACTCTGAGCAATTGGGGCTCAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662919.1 |
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| CDS TCA 72 bp | CACTTACTTTGGAAAAAGAAAACCCTTAGCTACTCCTaGAAGCTCCTACCCACTCCAGGACAACAGGGTAAA | + |
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Preference number: 6 (lower is better) Translates to: HLLWKKKTLSYS*KLLPTPGQQGK Trigger: TTTACCCTGTTGTCCTGGAGTGGGTAGGAGCTTTCAGGAGTAGCTAAGGGTTTTCTTTTTCCAAAGTAAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000653347.1 ENST00000662919.1 |
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| CDS TCA 72 bp | TTTGGCTTCGTTTCCATTGCTTTTGGTGTTTTGTCATaGAGTCTCTGCCCATGCCTATGTCCTGAATGGCAT | + |
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Preference number: 6 (lower is better) Translates to: FGFVSIAFGVLS*SLCPCLCPEWH Trigger: ATGCCATTCAGGACATAGGCATGGGCAGAGACTTCATGACAAAACACCAAAAGCAATGGAAACGAAGCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666491.1 |
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| CDS GCA 72 bp | TCAAAAATTGCGTTTGGCATGGAGCTCTGCATGACATaGTTCAACCTAAGAGTAAAATGCCGTGGCCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: SKIAFGMELCMT*FNLRVKCRGQV Trigger: AACTTGGCCACGGCATTTTACTCTTAGGTTGAAGCATGTCATGCAGAGCTCCATGCCAAACGCAATTTTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000653347.1 ENST00000662919.1 ENST00000666975.1 |
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| CDS CCA 72 bp | CTGCATGACATGCTTCAACCTAAGAGTAAAATGCCGTaGCCAAGTTATAACCCCTGTATGCGTAAGTTCATC | + |
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Preference number: 6 (lower is better) Translates to: LHDMLQPKSKMP*PSYNPCMRKFI Trigger: GATGAACTTACGCATACAGGGGTTATAACTTGGCCACGGCATTTTACTCTTAGGTTGAAGCATGTCATGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000653347.1 ENST00000662919.1 ENST00000666975.1 |
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| CDS CAA 90 bp | ACCTTGAACTTTGCTCTTCCAGCTTTAGCATGCTTGGAATCTAGATaGCTTTCAGTTTTCCTGATGACGCCCTATGTAACACATATCCCA | + |
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Preference number: 6 (lower is better) Translates to: TLNFALPALACLESR*LSVFLMTPYVTHIP Trigger: TGGGATATGTGTTACATAGGGCGTCATCAGGAAAACTGAAAGCAATCTAGATTCCAAGCATGCTAAAGCTGGAAGAGCAAAGTTCAAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662919.1 |
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| CDS CAA 90 bp | TGTGTTACAGTCACCTTGAACTTTGCTCTTCCAGCTTTAGCATGCTaGGAATCTAGATTGCTTTCAGTTTTCCTGATGACGCCCTATGTA | + |
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Preference number: 6 (lower is better) Translates to: CVTVTLNFALPALAC*ESRLLSVFLMTPYV Trigger: TACATAGGGCGTCATCAGGAAAACTGAAAGCAATCTAGATTCCAAGCATGCTAAAGCTGGAAGAGCAAAGTTCAAGGTGACTGTAACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662919.1 |
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| CDS GCA 72 bp | AGAAGCTTATCAAAAATTGCGTTTGGCATGGAGCTCTaGATGACATGCTTCAACCTAAGAGTAAAATGCCGT | + |
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Preference number: 6 (lower is better) Translates to: RSLSKIAFGMEL*MTCFNLRVKCR Trigger: ACGGCATTTTACTCTTAGGTTGAAGCATGTCATGCAGAGCTCCATGCCAAACGCAATTTTTGATAAGCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000653347.1 ENST00000662919.1 ENST00000666975.1 |
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| CDS CCA 72 bp | ATATTACATTGGTTATCAGAGGATAGGACAATAATGTaGGCATTCTCATCGCAGTCCACTCCATCAGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: ILHWLSEDRTIM*AFSSQSTPSVS Trigger: TGACACTGATGGAGTGGACTGCGATGAGAATGCCCACATTATTGTCCTATCCTCTGATAACCAATGTAATAT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000482617.1 ENST00000653347.1 ENST00000662919.1 ENST00000666491.1 ENST00000666975.1 |
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| CDS CAA 72 bp | TTTGCTCTTCCAGCTTTAGCATGCTTGGAATCTAGATaGCTTTCAGTTTTCCTGATGACGCCCTATGTAACA | + |
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Preference number: 6 (lower is better) Translates to: FALPALACLESR*LSVFLMTPYVT Trigger: TGTTACATAGGGCGTCATCAGGAAAACTGAAAGCAATCTAGATTCCAAGCATGCTAAAGCTGGAAGAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662919.1 |
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| CDS CAA 72 bp | TCCCATTTGTCAATTTTGGCTTCGTTTCCATTGCTTTaGGTGTTTTGTCATGAAGTCTCTGCCCATGCCTAT | + |
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Preference number: 6 (lower is better) Translates to: SHLSILASFPLL*VFCHEVSAHAY Trigger: ATAGGCATGGGCAGAGACTTCATGACAAAACACCAAAAGCAATGGAAACGAAGCCAAAATTGACAAATGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666491.1 |
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| CDS TCA 72 bp | TTATTGGCTTTCTTCCGTCTCCATGTCACCACTTCATaGTTTCGTTGTGCTTCTGGAATCACTTCTCATATA | + |
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Preference number: 6 (lower is better) Translates to: LLAFFRLHVTTS*FRCASGITSHI Trigger: TATATGAGAAGTGATTCCAGAAGCACAACGAAATCATGAAGTGGTGACATGGAGACGGAAGAAAGCCAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662919.1 |
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| CDS GCA 72 bp | CTTCCGTCTCCATGTCACCACTTCATGATTTCGTTGTaGTTCTGGAATCACTTCTCATATAAGCAAATTGTA | + |
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Preference number: 6 (lower is better) Translates to: LPSPCHHFMISL*FWNHFSYKQIV Trigger: TACAATTTGCTTATATGAGAAGTGATTCCAGAAGCACAACGAAATCATGAAGTGGTGACATGGAGACGGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662919.1 |
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| CDS CCA 72 bp | TACAGTCACCGTTTCATAGTAGGGCACAAATCTCCATaGTTGAAATCTGTAGTTCATTGGACTTTTCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: YSHRFIVGHKSP*LKSVVHWTFQC Trigger: ACACTGAAAAGTCCAATGAACTACAGATTTCAACCATGGAGATTTGTGCCCTACTATGAAACGGTGACTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653347.1 |
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| CDS CAA 90 bp | TTAATTAGATCCCATTTGTCAATTTTGGCTTCGTTTCCATTGCTTTaGGTGTTTTGTCATGAAGTCTCTGCCCATGCCTATGTCCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: LIRSHLSILASFPLL*VFCHEVSAHAYVLN Trigger: ATTCAGGACATAGGCATGGGCAGAGACTTCATGACAAAACACCAAAAGCAATGGAAACGAAGCCAAAATTGACAAATGGGATCTAATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666491.1 |
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| CDS CAA 90 bp | CAGCATGCTTATATATTCAAAGAATTATTACACAGAGAATGTGAGTaGACATGGATACCTGAACACCTGAAGAGTTTTTATGGCCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: QHAYIFKELLHRECE*TWIPEHLKSFYGPS Trigger: GGAGGGGCCATAAAAACTCTTCAGGTGTTCAGGTATCCATGTCAACTCACATTCTCTGTGTAATAATTCTTTGAATATATAAGCATGCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666491.1 |
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| CDS CCA 72 bp | AAAAGGATTTCAAAGAAGCTTATCAAAAATTGCGTTTaGCATGGAGCTCTGCATGACATGCTTCAACCTAAG | + |
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Preference number: 6 (lower is better) Translates to: KRISKKLIKNCV*HGALHDMLQPK Trigger: CTTAGGTTGAAGCATGTCATGCAGAGCTCCATGCCAAACGCAATTTTTGATAAGCTTCTTTGAAATCCTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000653347.1 ENST00000662919.1 ENST00000666975.1 |
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| CDS CCA 72 bp | CCTCTTAGAATGGAGCTATATGATCGCCATTCTAACTaGCATGAGATGATATCTCATTGTGGTTTTCATTTG | + |
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Preference number: 6 (lower is better) Translates to: PLRMELYDRHSN*HEMISHCGFHL Trigger: CAAATGAAAACCACAATGAGATATCATCTCATGCCAGTTAGAATGGCGATCATATAGCTCCATTCTAAGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666491.1 |
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| CDS CAA 72 bp | TTTCTTCCGTCTCCATGTCACCACTTCATGATTTCGTaGTGCTTCTGGAATCACTTCTCATATAAGCAAATT | + |
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Preference number: 6 (lower is better) Translates to: FLPSPCHHFMIS*CFWNHFSYKQI Trigger: AATTTGCTTATATGAGAAGTGATTCCAGAAGCACAACGAAATCATGAAGTGGTGACATGGAGACGGAAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662919.1 |
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| CDS CAA 72 bp | GCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTaGTCAATTTTGGCTTCGTTTCCATTGCTTTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: AVQKLFSLIRSH*SILASFPLLLV Trigger: CACCAAAAGCAATGGAAACGAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666491.1 |
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| CDS CAA 72 bp | AGGCCTCAGATTTCTTTTATTAAAACTTGCTGTGCTTaGTTCCAGTCCACTATAGATGAGGGTCTTAATGGT | + |
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Preference number: 6 (lower is better) Translates to: RPQISFIKTCCA*FQSTIDEGLNG Trigger: ACCATTAAGACCCTCATCTATAGTGGACTGGAACAAAGCACAGCAAGTTTTAATAAAAGAAATCTGAGGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666975.1 |
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| CDS CAA 90 bp | CTGTGTTACAGTCACCGTTTCATAGTAGGGCACAAATCTCCATGGTaGAAATCTGTAGTTCATTGGACTTTTCAGTGTGATATAAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: LCYSHRFIVGHKSPW*KSVVHWTFQCDIKS Trigger: ACTTTTTATATCACACTGAAAAGTCCAATGAACTACAGATTTCAACCATGGAGATTTGTGCCCTACTATGAAACGGTGACTGTAACACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653347.1 |
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| CDS CCA 72 bp | AATGTTATTTGGCCTGATTCATTCAAACGCTATGCCTaGAAAGCTGCTGTTAAATTAGAGAAGTTACATCAA | + |
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Preference number: 6 (lower is better) Translates to: NVIWPDSFKRYA*KAAVKLEKLHQ Trigger: TTGATGTAACTTCTCTAATTTAACAGCAGCTTTCCAGGCATAGCGTTTGAATGAATCAGGCCAAATAACATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653347.1 ENST00000662919.1 |
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| CDS GCA 72 bp | ATAAGCAAATTGTACCCATATTCTCCTCTTGGAATTTaGTTCGGAAAACTCAAACTAAGACATCTGTTTAGT | + |
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Preference number: 6 (lower is better) Translates to: ISKLYPYSPLGI*FGKLKLRHLFS Trigger: ACTAAACAGATGTCTTAGTTTGAGTTTTCCGAAGCAAATTCCAAGAGGAGAATATGGGTACAATTTGCTTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662919.1 |
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| CDS CCA 72 bp | TTCTCATATAAGCAAATTGTACCCATATTCTCCTCTTaGAATTTGCTTCGGAAAACTCAAACTAAGACATCT | + |
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Preference number: 6 (lower is better) Translates to: FSYKQIVPIFSS*NLLRKTQTKTS Trigger: AGATGTCTTAGTTTGAGTTTTCCGAAGCAAATTCCAAGAGGAGAATATGGGTACAATTTGCTTATATGAGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662919.1 |
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