Pregenerated sensors for LINC02021 (Homo sapiens)

Ensembl gene IDs: ENSG00000249846

Ensembl transcript IDs: ENST00000504808.3, ENST00000658712.1, ENST00000659120.1, ENST00000665912.1, ENST00000668664.1, ENST00000670900.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GACTCCTTTCCAGATCTTCTTGGCTTAGCAGCTGCAGACCGACACTaGCCGATCGATCGCCTTGGAAGCCTGGACGCTTCCGAAGCCCAG	+
Preference number: 5 (lower is better) Translates to: DSFPDLLGLAAADRH*PIDRLGSLDASEAQ Trigger: CTGGGCTTCGGAAGCGTCCAGGCTTCCAAGGCGATCGATCGGGCAGTGTCGGTCTGCAGCTGCTAAGCCAAGAAGATCTGGAAAGGAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665912.1
CDS GCA 90 bp	CGTGGCCTCTACCTATTAGCTGCCAGTAGCACCACCTCCTCCAGCTaGAACAACCAAAATTGTCTCCAGACATGGCCACATGTTCTCTTG	+
Preference number: 5 (lower is better) Translates to: RGLYLLAASSTTSSS*NNQNCLQTWPHVLL Trigger: CAAGAGAACATGTGGCCATGTCTGGAGACAATTTTGGTTGTTGCAGCTGGAGGAGGTGGTGCTACTGGCAGCTAATAGGTAGAGGCCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000665912.1 ENST00000668664.1 ENST00000670900.1
CDS TCA 90 bp	GGCATCTTGTTAAAATGCAGATTCTGGCCCAGGAGGTCCTTCCGGTaGGCGCTGAGAGTCTTCAATTCCAAAAGCTCCCAGGTGATGCAA	+
Preference number: 5 (lower is better) Translates to: GILLKCRFWPRRSFR*ALRVFNSKSSQVMQ Trigger: TTGCATCACCTGGGAGCTTTTGGAATTGAAGACTCTCAGCGCTCACCGGAAGGACCTCCTGGGCCAGAATCTGCATTTTAACAAGATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000659120.1 ENST00000665912.1 ENST00000668664.1 ENST00000670900.1
CDS TCA 72 bp	TTAAAATGCAGATTCTGGCCCAGGAGGTCCTTCCGGTaGGCGCTGAGAGTCTTCAATTCCAAAAGCTCCCAG	+
Preference number: 6 (lower is better) Translates to: LKCRFWPRRSFR*ALRVFNSKSSQ Trigger: CTGGGAGCTTTTGGAATTGAAGACTCTCAGCGCTCACCGGAAGGACCTCCTGGGCCAGAATCTGCATTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000659120.1 ENST00000665912.1 ENST00000668664.1 ENST00000670900.1
CDS GCA 72 bp	ATAAATATGTGGGTGGCGCCCCCTGGAGGTATGCAATaGACAACTTGCACAAATGGTAAGTCATCGTATCCC	+
Preference number: 6 (lower is better) Translates to: INMWVAPPGGMQ*TTCTNGKSSYP Trigger: GGGATACGATGACTTACCATTTGTGCAAGTTGTGCATTGCATACCTCCAGGGGGCGCCACCCACATATTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000665912.1 ENST00000668664.1 ENST00000670900.1
CDS TCA 72 bp	CCCATATACACAAAAAGCAGGGAGAGAATTATACCATaGACCCCCATGCACCCATCATCCCACTGCAAGAAC	+
Preference number: 6 (lower is better) Translates to: PIYTKSRERIIP*TPMHPSSHCKN Trigger: GTTCTTGCAGTGGGATGATGGGTGCATGGGGGTTCATGGTATAATTCTCTCCCTGCTTTTTGTGTATATGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000659120.1
CDS GCA 72 bp	AGAGCAACTGTTTATTGCCATGTAGACTATGTACTGTaGAATTCCTGGGGTGGCATTTTCATAAATATGTGG	+
Preference number: 6 (lower is better) Translates to: RATVYCHVDYVL*NSWGGIFINMW Trigger: CCACATATTTATGAAAATGCCACCCCAGGAATTGCACAGTACATAGTCTACATGGCAATAAACAGTTGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000665912.1 ENST00000668664.1 ENST00000670900.1
CDS TCA 72 bp	TTTCAGTGCTTTACATGTATTAATTTACAACAACTCTaGGGCAGGAGCTGTGATTACGCCCATTTAACAGAT	+
Preference number: 6 (lower is better) Translates to: FQCFTCINLQQL*GRSCDYAHLTD Trigger: ATCTGTTAAATGGGCGTAATCACAGCTCCTGCCTCAGAGTTGTTGTAAATTAATACATGTAAAGCACTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504808.3 ENST00000658712.1

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