Pregenerated sensors for LINC02020 (Homo sapiens)
Ensembl gene IDs: ENSG00000234548Ensembl transcript IDs: ENST00000414102.6, ENST00000421006.2, ENST00000434896.1, ENST00000435548.2, ENST00000651581.1, ENST00000653290.1, ENST00000653327.1, ENST00000655604.1, ENST00000657246.1, ENST00000657428.1, ENST00000658003.1, ENST00000658309.1, ENST00000659303.1, ENST00000659833.1, ENST00000660881.1, ENST00000661596.1, ENST00000662106.1, ENST00000662985.1, ENST00000663132.1, ENST00000663703.1, ENST00000664789.1, ENST00000665288.1, ENST00000665684.1, ENST00000667882.1, ENST00000670005.1, ENST00000670102.1, ENST00000671153.1
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGTCGTCTGTCAGCTTGGCGAGGGCTGGATGATCTGCTTCCGGAATaGCCCACTCACATGGCTGTGGGAAACAGGCCTCAGCCCCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SRLSAWRGLDDLLPE*PTHMAVGNRPQPLS Trigger: GGAGAGGGGCTGAGGCCTGTTTCCCACAGCCATGTGAGTGGGCCATTCCGGAAGCAGATCATCCAGCCCTCGCCAAGCTGACAGACGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000659303.1 ENST00000663132.1 ENST00000663703.1 |
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| CDS CCA 90 bp | GGGTCAGGGATTCTGGAGTGGCTTAGCTGGGTGGGGTCTCCGGGTTaGTCTCTCGTGAGGCTCCAGTCTAGATGTTGGCTGGGGATGCAG | + |
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Preference number: 5 (lower is better) Translates to: GSGILEWLSWVGSPG*SLVRLQSRCWLGMQ Trigger: CTGCATCCCCAGCCAACATCTAGACTGGAGCCTCACGAGAGACCAACCCGGAGACCCCACCCAGCTAAGCCACTCCAGAATCCCTGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000659303.1 ENST00000663132.1 ENST00000663703.1 |
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| CDS TCA 90 bp | TTCTGGAGTGGCTTAGCTGGGTGGGGTCTCCGGGTTGGTCTCTCGTaGGGCTCCAGTCTAGATGTTGGCTGGGGATGCAGTCGTCTGTCA | + |
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Preference number: 5 (lower is better) Translates to: FWSGLAGWGLRVGLS*GSSLDVGWGCSRLS Trigger: TGACAGACGACTGCATCCCCAGCCAACATCTAGACTGGAGCCTCACGAGAGACCAACCCGGAGACCCCACCCAGCTAAGCCACTCCAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000659303.1 ENST00000663132.1 ENST00000663703.1 |
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| CDS CCA 90 bp | GGCTTGAGAGCAGCGACCAATGTGTGGTGTTGTCCCTCTTATAGGTaGATGACTCAGATCCAGCAGGCCGATCCTTCACCAAGAGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: GLRAATNVWCCPSYR*MTQIQQADPSPRAR Trigger: CCTGGCTCTTGGTGAAGGATCGGCCTGCTGGATCTGAGTCATCCACCTATAAGAGGGACAACACCACACATTGGTCGCTGCTCTCAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000414102.6 ENST00000421006.2 ENST00000434896.1 ENST00000435548.2 ENST00000651581.1 ENST00000653290.1 ENST00000653327.1 ENST00000657246.1 ENST00000657428.1 ENST00000659303.1 ENST00000659833.1 ENST00000660881.1 ENST00000661596.1 ENST00000662106.1 ENST00000662985.1 ENST00000663132.1 ENST00000663703.1 ENST00000664789.1 ENST00000665288.1 ENST00000665684.1 ENST00000667882.1 ENST00000670005.1 |
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| CDS CCA 90 bp | CAAGTGGGGTGGTATTCCAGGGGCTTGAGAGCAGCGACCAATGTGTaGTGTTGTCCCTCTTATAGGTGGATGACTCAGATCCAGCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: QVGWYSRGLRAATNV*CCPSYRWMTQIQQA Trigger: GGCCTGCTGGATCTGAGTCATCCACCTATAAGAGGGACAACACCACACATTGGTCGCTGCTCTCAAGCCCCTGGAATACCACCCCACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 23 transcripts: ENST00000414102.6 ENST00000421006.2 ENST00000434896.1 ENST00000435548.2 ENST00000651581.1 ENST00000653290.1 ENST00000653327.1 ENST00000657246.1 ENST00000657428.1 ENST00000658309.1 ENST00000659303.1 ENST00000659833.1 ENST00000660881.1 ENST00000661596.1 ENST00000662106.1 ENST00000662985.1 ENST00000663132.1 ENST00000663703.1 ENST00000664789.1 ENST00000665288.1 ENST00000665684.1 ENST00000667882.1 ENST00000670005.1 |
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| CDS CCA 90 bp | GCTATAGTGAGAGCCCATCTAGTCAGCAATGCTCTTGGGAGGAGTTaGAGACAGGCAAGCAAAGGCAGCCACTGTTACCAGGAGAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: AIVRAHLVSNALGRS*RQASKGSHCYQEKP Trigger: TGGCTTCTCCTGGTAACAGTGGCTGCCTTTGCTTGCCTGTCTCCAACTCCTCCCAAGAGCATTGCTGACTAGATGGGCTCTCACTATAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657428.1 ENST00000659303.1 |
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| CDS CCA 90 bp | GATTCAAAGGTACAGCTCACAGTCAGCAATGCTCTTGGGAGGAGTTaGAGACAGGCAAGCAAAGGCAGCCACTGTTACCAGGAGAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: DSKVQLTVSNALGRS*RQASKGSHCYQEKP Trigger: TGGCTTCTCCTGGTAACAGTGGCTGCCTTTGCTTGCCTGTCTCCAACTCCTCCCAAGAGCATTGCTGACTGTGAGCTGTACCTTTGAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662106.1 ENST00000667882.1 |
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| CDS CCA 90 bp | GGCTTGAGAGCAGCGACCAATGTGTGGTGTTGTCCCTCTTATAGGTaGATGACTCAGATCCAGCAGGCCGATCCTTTCAGACACTCAGTA | + |
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Preference number: 5 (lower is better) Translates to: GLRAATNVWCCPSYR*MTQIQQADPFRHSV Trigger: TACTGAGTGTCTGAAAGGATCGGCCTGCTGGATCTGAGTCATCCACCTATAAGAGGGACAACACCACACATTGGTCGCTGCTCTCAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658309.1 |
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| CDS TCA 90 bp | AGGCTGCTTCTCATGGCTCAATGTGAAGTCTGTTGGGCAAGGAATTaGCTCTGGTCCGAGATCACACTGCTCCAGCTGGATAAGGAAACT | + |
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Preference number: 5 (lower is better) Translates to: RLLLMAQCEVCWARN*LWSEITLLQLDKET Trigger: AGTTTCCTTATCCAGCTGGAGCAGTGTGATCTCGGACCAGAGTCAATTCCTTGCCCAACAGACTTCACATTGAGCCATGAGAAGCAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 17 transcripts: ENST00000421006.2 ENST00000653290.1 ENST00000653327.1 ENST00000655604.1 ENST00000657246.1 ENST00000657428.1 ENST00000658003.1 ENST00000658309.1 ENST00000659833.1 ENST00000660881.1 ENST00000661596.1 ENST00000662106.1 ENST00000662985.1 ENST00000665288.1 ENST00000670005.1 ENST00000670102.1 ENST00000671153.1 |
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| CDS CCA 90 bp | TTTGTTTATGTGGGTGGTATAGTCAGCAATGCTCTTGGGAGGAGTTaGAGACAGGCAAGCAAAGGCAGCCACTGTTACCAGGAGAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: FVYVGGIVSNALGRS*RQASKGSHCYQEKP Trigger: TGGCTTCTCCTGGTAACAGTGGCTGCCTTTGCTTGCCTGTCTCCAACTCCTCCCAAGAGCATTGCTGACTATACCACCCACATAAACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000414102.6 ENST00000435548.2 ENST00000651581.1 ENST00000660881.1 ENST00000661596.1 ENST00000664789.1 |
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| CDS TCA 90 bp | AGACCTGTAGCTGATAGCAGAATCAAGGATGAGGCTTTGAGGCAGTaGCAGAGGCCATTTCACAGGTTTTGGAGAAGTGTCCAGGTAAGG | + |
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Preference number: 5 (lower is better) Translates to: RPVADSRIKDEALRQ*QRPFHRFWRSVQVR Trigger: CCTTACCTGGACACTTCTCCAAAACCTGTGAAATGGCCTCTGTCACTGCCTCAAAGCCTCATCCTTGATTCTGCTATCAGCTACAGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657246.1 ENST00000671153.1 |
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| CDS TCA 90 bp | TCCTCCAGGAAGGATTCGAGAAGAAGGCATTGTTATCAGAGGAAATaGAGCTCCACGCTTGTTATTGCCCCTGAAGACCTTCCAGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: SSRKDSRRRHCYQRK*SSTLVIAPEDLPVG Trigger: TCCCACTGGAAGGTCTTCAGGGGCAATAACAAGCGTGGAGCTTCATTTCCTCTGATAACAATGCCTTCTTCTCGAATCCTTCCTGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665288.1 ENST00000667882.1 |
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| CDS CCA 90 bp | TCCTTCACCAAGAGCCAGGGCAAGAATTCAAGCAGAACATGTATGTaGTTATGCTGGGGTAAACAAATTGACTGCTCTGCCAGTTGTATA | + |
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Preference number: 5 (lower is better) Translates to: SFTKSQGKNSSRTCM*LCWGKQIDCSASCI Trigger: TATACAACTGGCAGAGCAGTCAATTTGTTTACCCCAGCATAACCACATACATGTTCTGCTTGAATTCTTGCCCTGGCTCTTGGTGAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000665288.1 ENST00000667882.1 ENST00000670005.1 |
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| CDS TCA 90 bp | AGTGTCTCAGAATGCATCAGAAGCCTGAACCCAAGCTCTGTTCTTTaGGGTGTCAATAGTTTGAAGTATACGGTACAGTCCTTTTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: SVSECIRSLNPSSVL*GVNSLKYTVQSFSV Trigger: CACAGAAAAGGACTGTACCGTATACTTCAAACTATTGACACCTCAAAGAACAGAGCTTGGGTTCAGGCTTCTGATGCATTCTGAGACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000414102.6 ENST00000434896.1 ENST00000435548.2 ENST00000651581.1 ENST00000657246.1 ENST00000658309.1 ENST00000659833.1 ENST00000661596.1 ENST00000664789.1 ENST00000665684.1 ENST00000671153.1 |
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| CDS TCA 90 bp | CAGAATCACTGGGTAGAGCAAGGCGAGAATATCTACATCTTAGTGTaGAAAGATAGTAGGTTTACAGCAGAGGAGCAGTTCATTAAGCTC | + |
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Preference number: 5 (lower is better) Translates to: QNHWVEQGENIYILV*KDSRFTAEEQFIKL Trigger: GAGCTTAATGAACTGCTCCTCTGCTGTAAACCTACTATCTTTTCACACTAAGATGTAGATATTCTCGCCTTGCTCTACCCAGTGATTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658309.1 ENST00000659833.1 ENST00000661596.1 |
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| CDS GCA 90 bp | ACCAAGAGCCAGGGCAAGAATTCAAGCAGAACATGTATGTGGTTATaGTGGGGTAAACAAATTGACTGCTCTGCCAGTTGTATAATAAAA | + |
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Preference number: 5 (lower is better) Translates to: TKSQGKNSSRTCMWL*WGKQIDCSASCIIK Trigger: TTTTATTATACAACTGGCAGAGCAGTCAATTTGTTTACCCCAGCATAACCACATACATGTTCTGCTTGAATTCTTGCCCTGGCTCTTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000665288.1 ENST00000667882.1 ENST00000670005.1 |
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| CDS GCA 90 bp | AAATATCATTGCGTTACATTGCCTACATTGTTCAGTACAATAACATaGTGTGCAGGTTGGCAGCCTAGGAGCAATACGCTATACCATATT | + |
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Preference number: 5 (lower is better) Translates to: KYHCVTLPTLFSTIT*CAGWQPRSNTLYHI Trigger: AATATGGTATAGCGTATTGCTCCTAGGCTGCCAACCTGCACAGCATGTTATTGTACTGAACAATGTAGGCAATGTAACGCAATGATATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000651581.1 ENST00000653290.1 ENST00000664789.1 ENST00000665684.1 |
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| CDS CCA 90 bp | AAGAGCCAGGGCAAGAATTCAAGCAGAACATGTATGTGGTTATGCTaGGGTAAACAAATTGACTGCTCTGCCAGTTGTATAATAAAAGTA | + |
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Preference number: 5 (lower is better) Translates to: KSQGKNSSRTCMWLC*GKQIDCSASCIIKV Trigger: TACTTTTATTATACAACTGGCAGAGCAGTCAATTTGTTTACCCCAGCATAACCACATACATGTTCTGCTTGAATTCTTGCCCTGGCTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000665288.1 ENST00000667882.1 ENST00000670005.1 |
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| CDS GCA 90 bp | AGCAGAACCATATTGGATAGTGTGGATATAGAGCATTTTCATCATTaGTTAAAGTTCTACAGTCATGCACCAAATAATGATGCTTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: SRTILDSVDIEHFHH*LKFYSHAPNNDASA Trigger: GGCTGAAGCATCATTATTTGGTGCATGACTGTAGAACTTTAAGCAATGATGAAAATGCTCTATATCCACACTATCCAATATGGTTCTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653327.1 ENST00000661596.1 ENST00000662106.1 ENST00000663132.1 |
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| CDS GCA 90 bp | GTGGTTACCATATTGGATAGTGTGGATATAGAGCATTTTCATCATTaGTTAAAGTTCTACAGTCATGCACCAAATAATGATGCTTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: VVTILDSVDIEHFHH*LKFYSHAPNNDASA Trigger: GGCTGAAGCATCATTATTTGGTGCATGACTGTAGAACTTTAAGCAATGATGAAAATGCTCTATATCCACACTATCCAATATGGTAACCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658309.1 ENST00000659833.1 ENST00000660881.1 |
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| CDS GCA 90 bp | GGTGGTATCATATTGGATAGTGTGGATATAGAGCATTTTCATCATTaGTTAAAGTTCTACAGTCATGCACCAAATAATGATGCTTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: GGIILDSVDIEHFHH*LKFYSHAPNNDASA Trigger: GGCTGAAGCATCATTATTTGGTGCATGACTGTAGAACTTTAAGCAATGATGAAAATGCTCTATATCCACACTATCCAATATGATACCACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655604.1 |
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| CDS GCA 90 bp | GAACCCAGAGATATTTCCAAGCCTGCAAGTTCAATTCATGGTAAGTaGCTTCTACAGGTGGACTTAAAAACAATCTTTTATGTTGTATAT | + |
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Preference number: 5 (lower is better) Translates to: EPRDISKPASSIHGK*LLQVDLKTIFYVVY Trigger: ATATACAACATAAAAGATTGTTTTTAAGTCCACCTGTAGAAGGCACTTACCATGAATTGAACTTGCAGGCTTGGAAATATCTCTGGGTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000651581.1 ENST00000653290.1 ENST00000664789.1 ENST00000665684.1 |
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| CDS TCA 72 bp | GGCTTAGCTGGGTGGGGTCTCCGGGTTGGTCTCTCGTaGGGCTCCAGTCTAGATGTTGGCTGGGGATGCAGT | + |
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Preference number: 6 (lower is better) Translates to: GLAGWGLRVGLS*GSSLDVGWGCS Trigger: ACTGCATCCCCAGCCAACATCTAGACTGGAGCCTCACGAGAGACCAACCCGGAGACCCCACCCAGCTAAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000659303.1 ENST00000663132.1 ENST00000663703.1 |
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| CDS CCA 72 bp | CTCTGGGGGCCTGGGCATCAGCAAGTCGGATGGCAGTaGAAGGTGGAGAAATGGAATCCTGCTGGGGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LWGPGHQQVGWQ*KVEKWNPAGGS Trigger: TGAGCCCCCAGCAGGATTCCATTTCTCCACCTTCCACTGCCATCCGACTTGCTGATGCCCAGGCCCCCAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000663132.1 |
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| CDS CCA 72 bp | TCAGCTTGGCGAGGGCTGGATGATCTGCTTCCGGAATaGCCCACTCACATGGCTGTGGGAAACAGGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: SAWRGLDDLLPE*PTHMAVGNRPQ Trigger: CTGAGGCCTGTTTCCCACAGCCATGTGAGTGGGCCATTCCGGAAGCAGATCATCCAGCCCTCGCCAAGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659303.1 ENST00000663132.1 ENST00000663703.1 |
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| CDS CCA 72 bp | CAATGTTTGGGGTCAGGGATTCTGGAGTGGCTTAGCTaGGTGGGGTCTCCGGGTTGGTCTCTCGTGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: QCLGSGILEWLS*VGSPGWSLVRL Trigger: GAGCCTCACGAGAGACCAACCCGGAGACCCCACCCAGCTAAGCCACTCCAGAATCCCTGACCCCAAACATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000659303.1 ENST00000663132.1 ENST00000663703.1 |
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| CDS CCA 72 bp | TTCCTCCTCTGGGGGCCTGGGCATCAGCAAGTCGGATaGCAGTGGAAGGTGGAGAAATGGAATCCTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: FLLWGPGHQQVG*QWKVEKWNPAG Trigger: CCCAGCAGGATTCCATTTCTCCACCTTCCACTGCCATCCGACTTGCTGATGCCCAGGCCCCCAGAGGAGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663132.1 |
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| CDS CAA 90 bp | CAGCTGGCTCCCAGGAGAAGCCAAGTGGGGTGGTATTCCAGGGGCTaGAGAGCAGCGACCAATGTGTGGTGTTGTCCCTCTTATAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: QLAPRRSQVGWYSRG*RAATNVWCCPSYRW Trigger: CCACCTATAAGAGGGACAACACCACACATTGGTCGCTGCTCTCAAGCCCCTGGAATACCACCCCACTTGGCTTCTCCTGGGAGCCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663703.1 |
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| CDS CCA 72 bp | ATTCTGGAGTGGCTTAGCTGGGTGGGGTCTCCGGGTTaGTCTCTCGTGAGGCTCCAGTCTAGATGTTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ILEWLSWVGSPG*SLVRLQSRCWL Trigger: CAGCCAACATCTAGACTGGAGCCTCACGAGAGACCAACCCGGAGACCCCACCCAGCTAAGCCACTCCAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000659303.1 ENST00000663132.1 ENST00000663703.1 |
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| CDS CAA 72 bp | CCCAGGAGAAGCCAAGTGGGGTGGTATTCCAGGGGCTaGAGAGCAGCGACCAATGTGTGGTGTTGTCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: PRRSQVGWYSRG*RAATNVWCCPS Trigger: AGAGGGACAACACCACACATTGGTCGCTGCTCTCAAGCCCCTGGAATACCACCCCACTTGGCTTCTCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663703.1 |
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| CDS CAA 72 bp | ACCAGGAGAAGCCAAGTGGGGTGGTATTCCAGGGGCTaGAGAGCAGCGACCAATGTGTGGTGTTGTCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: TRRSQVGWYSRG*RAATNVWCCPS Trigger: AGAGGGACAACACCACACATTGGTCGCTGCTCTCAAGCCCCTGGAATACCACCCCACTTGGCTTCTCCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000414102.6 ENST00000435548.2 ENST00000651581.1 ENST00000657428.1 ENST00000659303.1 ENST00000660881.1 ENST00000661596.1 ENST00000662106.1 ENST00000663132.1 ENST00000664789.1 ENST00000667882.1 |
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| CDS CAA 72 bp | CTCAGGAGAAGCCAAGTGGGGTGGTATTCCAGGGGCTaGAGAGCAGCGACCAATGTGTGGTGTTGTCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LRRSQVGWYSRG*RAATNVWCCPS Trigger: AGAGGGACAACACCACACATTGGTCGCTGCTCTCAAGCCCCTGGAATACCACCCCACTTGGCTTCTCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000421006.2 ENST00000665288.1 ENST00000665684.1 |
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| CDS CAA 90 bp | GCCACTGTTACCAGGAGAAGCCAAGTGGGGTGGTATTCCAGGGGCTaGAGAGCAGCGACCAATGTGTGGTGTTGTCCCTCTTATAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: ATVTRRSQVGWYSRG*RAATNVWCCPSYRW Trigger: CCACCTATAAGAGGGACAACACCACACATTGGTCGCTGCTCTCAAGCCCCTGGAATACCACCCCACTTGGCTTCTCCTGGTAACAGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000414102.6 ENST00000435548.2 ENST00000651581.1 ENST00000657428.1 ENST00000659303.1 ENST00000660881.1 ENST00000661596.1 ENST00000662106.1 ENST00000664789.1 ENST00000667882.1 |
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| CDS CAA 90 bp | AGAGCCCATCTCAGGAGAAGCCAAGTGGGGTGGTATTCCAGGGGCTaGAGAGCAGCGACCAATGTGTGGTGTTGTCCCTCTTATAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: RAHLRRSQVGWYSRG*RAATNVWCCPSYRW Trigger: CCACCTATAAGAGGGACAACACCACACATTGGTCGCTGCTCTCAAGCCCCTGGAATACCACCCCACTTGGCTTCTCCTGAGATGGGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000421006.2 ENST00000665288.1 ENST00000665684.1 |
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| CDS TCA 72 bp | CCAGCATTTTGGGGAGGCCAAAGTGGGAGGATGGCTTaGGCCCAGGAGTTCCAGAACAGGGCTATAGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: PAFWGGQSGRMA*AQEFQNRAIVR Trigger: TCTCACTATAGCCCTGTTCTGGAACTCCTGGGCTCAAGCCATCCTCCCACTTTGGCCTCCCCAAAATGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000421006.2 ENST00000657428.1 ENST00000658003.1 ENST00000659303.1 ENST00000662106.1 ENST00000665288.1 ENST00000665684.1 |
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| CDS TCA 72 bp | TCAGAGGAAATGAAGCTCCACGCTTGTTATTGCCCCTaGAGACCTTCCAGTGGGACAGGAGGGGAGGCGGAA | + |
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Preference number: 6 (lower is better) Translates to: SEEMKLHACYCP*RPSSGTGGEAE Trigger: TTCCGCCTCCCCTCCTGTCCCACTGGAAGGTCTTCAGGGGCAATAACAAGCGTGGAGCTTCATTTCCTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000665288.1 ENST00000667882.1 |
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| CDS CCA 72 bp | ATCATGTCACAATGTTTGGGGTCAGGGATTCTGGAGTaGCTTAGCTGGGTGGGGTCTCCGGGTTGGTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: IMSQCLGSGILE*LSWVGSPGWSL Trigger: GAGAGACCAACCCGGAGACCCCACCCAGCTAAGCCACTCCAGAATCCCTGACCCCAAACATTGTGACATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000659303.1 ENST00000663132.1 ENST00000663703.1 |
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| CDS CAA 72 bp | ATCAGGAGAAGCCAAGTGGGGTGGTATTCCAGGGGCTaGAGAGCAGCGACCAATGTGTGGTGTTGTCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: IRRSQVGWYSRG*RAATNVWCCPS Trigger: AGAGGGACAACACCACACATTGGTCGCTGCTCTCAAGCCCCTGGAATACCACCCCACTTGGCTTCTCCTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000434896.1 ENST00000653290.1 ENST00000653327.1 ENST00000657246.1 ENST00000658309.1 ENST00000659833.1 ENST00000662985.1 ENST00000670005.1 |
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| CDS CAA 72 bp | GCAAGAATGAGAACGGCATGGTGGTTGGTAGGCATTTaGCGGGCCAGAATGCTCCCTGACAGTGTCCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: ARMRTAWWLVGI*RARMLPDSVPR Trigger: CCTTGGGACACTGTCAGGGAGCATTCTGGCCCGCAAAATGCCTACCAACCACCATGCCGTTCTCATTCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662106.1 ENST00000667882.1 |
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| CDS CCA 72 bp | GCAGCGACCAATGTGTGGTGTTGTCCCTCTTATAGGTaGATGACTCAGATCCAGCAGGCCGATCCTTCACCA | + |
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Preference number: 6 (lower is better) Translates to: AATNVWCCPSYR*MTQIQQADPSP Trigger: TGGTGAAGGATCGGCCTGCTGGATCTGAGTCATCCACCTATAAGAGGGACAACACCACACATTGGTCGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000414102.6 ENST00000421006.2 ENST00000434896.1 ENST00000435548.2 ENST00000651581.1 ENST00000653290.1 ENST00000653327.1 ENST00000657246.1 ENST00000657428.1 ENST00000659303.1 ENST00000659833.1 ENST00000660881.1 ENST00000661596.1 ENST00000662106.1 ENST00000662985.1 ENST00000663132.1 ENST00000663703.1 ENST00000664789.1 ENST00000665288.1 ENST00000665684.1 ENST00000667882.1 ENST00000670005.1 |
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| CDS TCA 72 bp | CGACCAATGTGTGGTGTTGTCCCTCTTATAGGTGGATaGCTCAGATCCAGCAGGCCGATCCTTCACCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: RPMCGVVPLIGG*LRSSRPILHQE Trigger: CTCTTGGTGAAGGATCGGCCTGCTGGATCTGAGTCATCCACCTATAAGAGGGACAACACCACACATTGGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000414102.6 ENST00000421006.2 ENST00000434896.1 ENST00000435548.2 ENST00000651581.1 ENST00000653290.1 ENST00000653327.1 ENST00000657246.1 ENST00000657428.1 ENST00000659303.1 ENST00000659833.1 ENST00000660881.1 ENST00000661596.1 ENST00000662106.1 ENST00000662985.1 ENST00000663132.1 ENST00000663703.1 ENST00000664789.1 ENST00000665288.1 ENST00000665684.1 ENST00000667882.1 ENST00000670005.1 |
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| CDS CCA 72 bp | GCAGCGACCAATGTGTGGTGTTGTCCCTCTTATAGGTaGATGACTCAGATCCAGCAGGCCGATCCTTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AATNVWCCPSYR*MTQIQQADPFR Trigger: TCTGAAAGGATCGGCCTGCTGGATCTGAGTCATCCACCTATAAGAGGGACAACACCACACATTGGTCGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658309.1 |
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| CDS CAA 72 bp | AGGTTGCTAATGGCAAGAATGAGAACGGCATGGTGGTaGGTAGGCATTTTGCGGGCCAGAATGCTCCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: RLLMARMRTAWW*VGILRARMLPD Trigger: GTCAGGGAGCATTCTGGCCCGCAAAATGCCTACCAACCACCATGCCGTTCTCATTCTTGCCATTAGCAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000662106.1 ENST00000667882.1 |
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| CDS CAA 90 bp | TTGCTAATGGCAAGAATGAGAACGGCATGGTGGTTGGTAGGCATTTaGCGGGCCAGAATGCTCCCTGACAGTGTCCCAAGGGTTTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LLMARMRTAWWLVGI*RARMLPDSVPRVFL Trigger: CAGAAAAACCCTTGGGACACTGTCAGGGAGCATTCTGGCCCGCAAAATGCCTACCAACCACCATGCCGTTCTCATTCTTGCCATTAGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000662106.1 ENST00000667882.1 |
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| CDS CAA 90 bp | AGAAAGAGAAGGTTGCTAATGGCAAGAATGAGAACGGCATGGTGGTaGGTAGGCATTTTGCGGGCCAGAATGCTCCCTGACAGTGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RKRRLLMARMRTAWW*VGILRARMLPDSVP Trigger: TGGGACACTGTCAGGGAGCATTCTGGCCCGCAAAATGCCTACCAACCACCATGCCGTTCTCATTCTTGCCATTAGCAACCTTCTCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000662106.1 ENST00000667882.1 |
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| CDS CAA 90 bp | ATTCGAGAAGAAGGCATTGTTATCAGAGGAAATGAAGCTCCACGCTaGTTATTGCCCCTGAAGACCTTCCAGTGGGACAGGAGGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: IREEGIVIRGNEAPR*LLPLKTFQWDRRGG Trigger: GCCTCCCCTCCTGTCCCACTGGAAGGTCTTCAGGGGCAATAACAAGCGTGGAGCTTCATTTCCTCTGATAACAATGCCTTCTTCTCGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000665288.1 ENST00000667882.1 |
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| CDS TCA 72 bp | CTCATGGCTCAATGTGAAGTCTGTTGGGCAAGGAATTaGCTCTGGTCCGAGATCACACTGCTCCAGCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LMAQCEVCWARN*LWSEITLLQLD Trigger: ATCCAGCTGGAGCAGTGTGATCTCGGACCAGAGTCAATTCCTTGCCCAACAGACTTCACATTGAGCCATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 17 transcripts: ENST00000421006.2 ENST00000653290.1 ENST00000653327.1 ENST00000655604.1 ENST00000657246.1 ENST00000657428.1 ENST00000658003.1 ENST00000658309.1 ENST00000659833.1 ENST00000660881.1 ENST00000661596.1 ENST00000662106.1 ENST00000662985.1 ENST00000665288.1 ENST00000670005.1 ENST00000670102.1 ENST00000671153.1 |
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| CDS TCA 72 bp | CGACCAATGTGTGGTGTTGTCCCTCTTATAGGTGGATaGCTCAGATCCAGCAGGCCGATCCTTTCAGACACT | + |
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Preference number: 6 (lower is better) Translates to: RPMCGVVPLIGG*LRSSRPILSDT Trigger: AGTGTCTGAAAGGATCGGCCTGCTGGATCTGAGTCATCCACCTATAAGAGGGACAACACCACACATTGGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658309.1 |
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| CDS CCA 72 bp | TGGTATTCCAGGGGCTTGAGAGCAGCGACCAATGTGTaGTGTTGTCCCTCTTATAGGTGGATGACTCAGATC | + |
|
Preference number: 6 (lower is better) Translates to: WYSRGLRAATNV*CCPSYRWMTQI Trigger: GATCTGAGTCATCCACCTATAAGAGGGACAACACCACACATTGGTCGCTGCTCTCAAGCCCCTGGAATACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 23 transcripts: ENST00000414102.6 ENST00000421006.2 ENST00000434896.1 ENST00000435548.2 ENST00000651581.1 ENST00000653290.1 ENST00000653327.1 ENST00000657246.1 ENST00000657428.1 ENST00000658309.1 ENST00000659303.1 ENST00000659833.1 ENST00000660881.1 ENST00000661596.1 ENST00000662106.1 ENST00000662985.1 ENST00000663132.1 ENST00000663703.1 ENST00000664789.1 ENST00000665288.1 ENST00000665684.1 ENST00000667882.1 ENST00000670005.1 |
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| CDS CCA 72 bp | AGAAGGTTGCTAATGGCAAGAATGAGAACGGCATGGTaGTTGGTAGGCATTTTGCGGGCCAGAATGCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RRLLMARMRTAW*LVGILRARMLP Trigger: AGGGAGCATTCTGGCCCGCAAAATGCCTACCAACCACCATGCCGTTCTCATTCTTGCCATTAGCAACCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000662106.1 ENST00000667882.1 |
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| CDS CCA 72 bp | AAGAGAAGGTTGCTAATGGCAAGAATGAGAACGGCATaGTGGTTGGTAGGCATTTTGCGGGCCAGAATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: KRRLLMARMRTA*WLVGILRARML Trigger: GAGCATTCTGGCCCGCAAAATGCCTACCAACCACCATGCCGTTCTCATTCTTGCCATTAGCAACCTTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000662106.1 ENST00000667882.1 |
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| CDS CAA 72 bp | ATTGTTATCAGAGGAAATGAAGCTCCACGCTTGTTATaGCCCCTGAAGACCTTCCAGTGGGACAGGAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: IVIRGNEAPRLL*PLKTFQWDRRG Trigger: TCCCCTCCTGTCCCACTGGAAGGTCTTCAGGGGCAATAACAAGCGTGGAGCTTCATTTCCTCTGATAACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000665288.1 ENST00000667882.1 |
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| CDS TCA 72 bp | GCTGATAGCAGAATCAAGGATGAGGCTTTGAGGCAGTaGCAGAGGCCATTTCACAGGTTTTGGAGAAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ADSRIKDEALRQ*QRPFHRFWRSV Trigger: GACACTTCTCCAAAACCTGTGAAATGGCCTCTGTCACTGCCTCAAAGCCTCATCCTTGATTCTGCTATCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657246.1 ENST00000671153.1 |
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| CDS CAA 90 bp | AGGCCAGGGAAGAGAAAAACTTATTCGGAATTCACTGCAGGACTATaGACAGAGATAGATTACCGGATTTGTTGGTGGGGGATGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RPGKRKTYSEFTAGL*TEIDYRICWWGMVV Trigger: CACCACCATCCCCCACCAACAAATCCGGTAATCTATCTCTGTCAATAGTCCTGCAGTGAATTCCGAATAAGTTTTTCTCTTCCCTGGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 17 transcripts: ENST00000421006.2 ENST00000653290.1 ENST00000653327.1 ENST00000655604.1 ENST00000657246.1 ENST00000657428.1 ENST00000658003.1 ENST00000658309.1 ENST00000659833.1 ENST00000660881.1 ENST00000661596.1 ENST00000662106.1 ENST00000662985.1 ENST00000665288.1 ENST00000670005.1 ENST00000670102.1 ENST00000671153.1 |
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| CDS TCA 72 bp | GTCACTCAGAATAGCCTACATTCAAGAGGAGAGGAATaGGGCTGCATTGAAGGGAGCACACTGCAAAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: VTQNSLHSRGEE*GCIEGSTLQRM Trigger: CATTCTTTGCAGTGTGCTCCCTTCAATGCAGCCTCATTCCTCTCCTCTTGAATGTAGGCTATTCTGAGTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663132.1 |
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| CDS CAA 72 bp | TTTGAAGTATACGGTACAGTCCTTTTCTGTGGGGCTTaGAGGTGGTTCTTTGTCGGAGACACAAACCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: FEVYGTVLFCGA*RWFFVGDTNPD Trigger: GTCTGGGTTTGTGTCTCCGACAAAGAACCACCTCAAAGCCCCACAGAAAAGGACTGTACCGTATACTTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000414102.6 ENST00000434896.1 ENST00000435548.2 ENST00000651581.1 ENST00000657246.1 ENST00000658309.1 ENST00000659833.1 ENST00000661596.1 ENST00000664789.1 ENST00000665684.1 ENST00000671153.1 |
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| CDS GCA 72 bp | TGCGTTACATTGCCTACATTGTTCAGTACAATAACATaGTGTGCAGGTTGGCAGCCTAGGAGCAATACGCTA | + |
|
Preference number: 6 (lower is better) Translates to: CVTLPTLFSTIT*CAGWQPRSNTL Trigger: TAGCGTATTGCTCCTAGGCTGCCAACCTGCACAGCATGTTATTGTACTGAACAATGTAGGCAATGTAACGCA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000651581.1 ENST00000653290.1 ENST00000664789.1 ENST00000665684.1 |
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| CDS CCA 72 bp | TCTGGAGGACTCCCAAAAAGTTTTTGTTTATGTGGGTaGTATAGTCAGCAATGCTCTTGGGAGGAGTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SGGLPKSFCLCG*YSQQCSWEELE Trigger: CTCCAACTCCTCCCAAGAGCATTGCTGACTATACCACCCACATAAACAAAAACTTTTTGGGAGTCCTCCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENST00000414102.6 ENST00000435548.2 ENST00000651581.1 ENST00000660881.1 ENST00000661596.1 ENST00000664789.1 |
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| CDS CCA 72 bp | TTACAGCAGAGGAGCAGTTCATTAAGCTCTATATTTTaGTCTCAGGATCCAGGTGAGTTGCCCACCAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LQQRSSSLSSIF*SQDPGELPTKD Trigger: ATCCTTGGTGGGCAACTCACCTGGATCCTGAGACCAAAATATAGAGCTTAATGAACTGCTCCTCTGCTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658309.1 ENST00000659833.1 ENST00000661596.1 |
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| CDS CCA 72 bp | AAGAGCCAGGGCAAGAATTCAAGCAGAACATGTATGTaGTTATGCTGGGGTAAACAAATTGACTGCTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: KSQGKNSSRTCM*LCWGKQIDCSA Trigger: GGCAGAGCAGTCAATTTGTTTACCCCAGCATAACCACATACATGTTCTGCTTGAATTCTTGCCCTGGCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000665288.1 ENST00000667882.1 ENST00000670005.1 |
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| CDS CAA 72 bp | TCCGAGATCACACTGCTCCAGCTGGATAAGGAAACTTaGACTCCTTTCAGGATGCACTATTTCCTGGTGATT | + |
|
Preference number: 6 (lower is better) Translates to: SEITLLQLDKET*TPFRMHYFLVI Trigger: AATCACCAGGAAATAGTGCATCCTGAAAGGAGTCAAAGTTTCCTTATCCAGCTGGAGCAGTGTGATCTCGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 17 transcripts: ENST00000421006.2 ENST00000653290.1 ENST00000653327.1 ENST00000655604.1 ENST00000657246.1 ENST00000657428.1 ENST00000658003.1 ENST00000658309.1 ENST00000659833.1 ENST00000660881.1 ENST00000661596.1 ENST00000662106.1 ENST00000662985.1 ENST00000665288.1 ENST00000670005.1 ENST00000670102.1 ENST00000671153.1 |
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| CDS TCA 72 bp | GAATGCATCAGAAGCCTGAACCCAAGCTCTGTTCTTTaGGGTGTCAATAGTTTGAAGTATACGGTACAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ECIRSLNPSSVL*GVNSLKYTVQS Trigger: GGACTGTACCGTATACTTCAAACTATTGACACCTCAAAGAACAGAGCTTGGGTTCAGGCTTCTGATGCATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000414102.6 ENST00000434896.1 ENST00000435548.2 ENST00000651581.1 ENST00000657246.1 ENST00000658309.1 ENST00000659833.1 ENST00000661596.1 ENST00000664789.1 ENST00000665684.1 ENST00000671153.1 |
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| CDS TCA 72 bp | AAGGATTCGAGAAGAAGGCATTGTTATCAGAGGAAATaGAGCTCCACGCTTGTTATTGCCCCTGAAGACCTT | + |
|
Preference number: 6 (lower is better) Translates to: KDSRRRHCYQRK*SSTLVIAPEDL Trigger: AAGGTCTTCAGGGGCAATAACAAGCGTGGAGCTTCATTTCCTCTGATAACAATGCCTTCTTCTCGAATCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665288.1 ENST00000667882.1 |
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| CDS TCA 72 bp | AAAACCACTATAAGCCCCTTCAGTGCTGAGTTATTGTaGTGCCTTATGCATTCCGAAGCCAAACGTGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: KTTISPFSAELL*CLMHSEAKRGC Trigger: ACATCCACGTTTGGCTTCGGAATGCATAAGGCATCACAATAACTCAGCACTGAAGGGGCTTATAGTGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663132.1 |
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| CDS GCA 72 bp | AAAAGTTTTTGTTTATGTGGGTGGTATAGTCAGCAATaGTCTTGGGAGGAGTTGGAGACAGGCAAGCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: KSFCLCGWYSQQ*SWEELETGKQR Trigger: CCTTTGCTTGCCTGTCTCCAACTCCTCCCAAGAGCATTGCTGACTATACCACCCACATAAACAAAAACTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000414102.6 ENST00000435548.2 ENST00000651581.1 ENST00000660881.1 ENST00000661596.1 ENST00000664789.1 |
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| CDS GCA 72 bp | CAGGGCAAGAATTCAAGCAGAACATGTATGTGGTTATaGTGGGGTAAACAAATTGACTGCTCTGCCAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: QGKNSSRTCMWL*WGKQIDCSASC Trigger: ACAACTGGCAGAGCAGTCAATTTGTTTACCCCAGCATAACCACATACATGTTCTGCTTGAATTCTTGCCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000665288.1 ENST00000667882.1 ENST00000670005.1 |
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| CDS CCA 72 bp | TCTGGAGGACTCCCAAAAAGTTTTTGTTTATGTGGGTaGTATCTGCAGATAGCCACACAGCTGATGGAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: SGGLPKSFCLCG*YLQIATQLMEL Trigger: TAACTCCATCAGCTGTGTGGCTATCTGCAGATACCACCCACATAAACAAAAACTTTTTGGGAGTCCTCCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000421006.2 ENST00000657428.1 ENST00000658003.1 ENST00000662106.1 ENST00000665288.1 |
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| CDS CCA 72 bp | AGCTTAAACAACACATTTTTATCATGTCACAATGTTTaGGGTCAGGGATTCTGGAGTGGCTTAGCTGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLNNTFLSCHNV*GQGFWSGLAGW Trigger: CCACCCAGCTAAGCCACTCCAGAATCCCTGACCCCAAACATTGTGACATGATAAAAATGTGTTGTTTAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663703.1 |
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| CDS TCA 72 bp | TGGGTAGAGCAAGGCGAGAATATCTACATCTTAGTGTaGAAAGATAGTAGGTTTACAGCAGAGGAGCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: WVEQGENIYILV*KDSRFTAEEQF Trigger: GAACTGCTCCTCTGCTGTAAACCTACTATCTTTTCACACTAAGATGTAGATATTCTCGCCTTGCTCTACCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658309.1 ENST00000659833.1 ENST00000661596.1 |
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| CDS CCA 72 bp | AAATTCTGGAGGACTCCCAAAAAGTTTTTGTTTATGTaGGTGGTATCTGCAGATAGCCACACAGCTGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: KFWRTPKKFLFM*VVSADSHTADG Trigger: TCCATCAGCTGTGTGGCTATCTGCAGATACCACCCACATAAACAAAAACTTTTTGGGAGTCCTCCAGAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000421006.2 ENST00000657428.1 ENST00000658003.1 ENST00000662106.1 ENST00000665288.1 |
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| CDS CAA 72 bp | AAGCTTAAACAACACATTTTTATCATGTCACAATGTTaGGGGTCAGGGATTCTGGAGTGGCTTAGCTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: KLKQHIFIMSQC*GSGILEWLSWV Trigger: CACCCAGCTAAGCCACTCCAGAATCCCTGACCCCAAACATTGTGACATGATAAAAATGTGTTGTTTAAGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663703.1 |
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| CDS CCA 72 bp | GGCAAGAATTCAAGCAGAACATGTATGTGGTTATGCTaGGGTAAACAAATTGACTGCTCTGCCAGTTGTATA | + |
|
Preference number: 6 (lower is better) Translates to: GKNSSRTCMWLC*GKQIDCSASCI Trigger: TATACAACTGGCAGAGCAGTCAATTTGTTTACCCCAGCATAACCACATACATGTTCTGCTTGAATTCTTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000665288.1 ENST00000667882.1 ENST00000670005.1 |
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| CDS CAA 72 bp | ACCAAGAGCCAGGGCAAGAATTCAAGCAGAACCATATaGGATAGTGTGGATATAGAGCATTTTCATCATTGC | + |
|
Preference number: 6 (lower is better) Translates to: TKSQGKNSSRTI*DSVDIEHFHHC Trigger: GCAATGATGAAAATGCTCTATATCCACACTATCCAATATGGTTCTGCTTGAATTCTTGCCCTGGCTCTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000414102.6 ENST00000653327.1 ENST00000661596.1 ENST00000662106.1 ENST00000663132.1 |
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| CDS CAA 72 bp | AAGAGAAAAACTTATTCGGAATTCACTGCAGGACTATaGACAGAGATAGATTACCGGATTTGTTGGTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: KRKTYSEFTAGL*TEIDYRICWWG Trigger: CCCCCACCAACAAATCCGGTAATCTATCTCTGTCAATAGTCCTGCAGTGAATTCCGAATAAGTTTTTCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 17 transcripts: ENST00000421006.2 ENST00000653290.1 ENST00000653327.1 ENST00000655604.1 ENST00000657246.1 ENST00000657428.1 ENST00000658003.1 ENST00000658309.1 ENST00000659833.1 ENST00000660881.1 ENST00000661596.1 ENST00000662106.1 ENST00000662985.1 ENST00000665288.1 ENST00000670005.1 ENST00000670102.1 ENST00000671153.1 |
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| CDS CAA 72 bp | GCAAGACAGAAGCGCAGTGTCTTCAACAGCATATCTTaGAAAGTCATATTCCACCGTTTTCACTACATTCTA | + |
|
Preference number: 6 (lower is better) Translates to: ARQKRSVFNSIS*KVIFHRFHYIL Trigger: TAGAATGTAGTGAAAACGGTGGAATATGACTTTCAAAGATATGCTGTTGAAGACACTGCGCTTCTGTCTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663132.1 |
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| CDS TCA 72 bp | CATATTCCACCGTTTTCACTACATTCTATTGATAAGTaGGTCACTCAGAATAGCCTACATTCAAGAGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: HIPPFSLHSIDK*VTQNSLHSRGE Trigger: CTCTCCTCTTGAATGTAGGCTATTCTGAGTGACTCACTTATCAATAGAATGTAGTGAAAACGGTGGAATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663132.1 |
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| CDS CCA 72 bp | AAATTCTGGAGGACTCCCAAAAAGTTTTTGTTTATGTaGGTGGTATCTTTCAGACACTCAGTAGTCACAAGT | + |
|
Preference number: 6 (lower is better) Translates to: KFWRTPKKFLFM*VVSFRHSVVTS Trigger: ACTTGTGACTACTGAGTGTCTGAAAGATACCACCCACATAAACAAAAACTTTTTGGGAGTCCTCCAGAATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000670102.1 ENST00000671153.1 |
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| CDS CAA 90 bp | AAAGAGAGAGCAAGACAGAAGCGCAGTGTCTTCAACAGCATATCTTaGAAAGTCATATTCCACCGTTTTCACTACATTCTATTGATAAGT | + |
|
Preference number: 6 (lower is better) Translates to: KERARQKRSVFNSIS*KVIFHRFHYILLIS Trigger: ACTTATCAATAGAATGTAGTGAAAACGGTGGAATATGACTTTCAAAGATATGCTGTTGAAGACACTGCGCTTCTGTCTTGCTCTCTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663132.1 |
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| CDS GCA 72 bp | GATATTTCCAAGCCTGCAAGTTCAATTCATGGTAAGTaGCTTCTACAGGTGGACTTAAAAACAATCTTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: DISKPASSIHGK*LLQVDLKTIFY Trigger: ATAAAAGATTGTTTTTAAGTCCACCTGTAGAAGGCACTTACCATGAATTGAACTTGCAGGCTTGGAAATATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000651581.1 ENST00000653290.1 ENST00000664789.1 ENST00000665684.1 |
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