Pregenerated sensors for LINC02016 (Homo sapiens)
Ensembl gene IDs: ENSG00000244215Ensembl transcript IDs: ENST00000488425.1, ENST00000654968.1, ENST00000662154.1, ENST00000663573.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACACAGGTGACCTGGGCAGGGGCTCTGAGGAGCCGGTGGCGAGTCTaGGGTCTCAAGTGCCCAGGCCCTGTGTGCAGCTACAGAGTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: TQVTWAGALRSRWRV*GLKCPGPVCSYRVR Trigger: CCTAACTCTGTAGCTGCACACAGGGCCTGGGCACTTGAGACCTCAGACTCGCCACCGGCTCCTCAGAGCCCCTGCCCAGGTCACCTGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488425.1 |
||
| CDS GCA 90 bp | CCTGCTCCAGGCCCGGGAGACCCAGCAGTGAACAGGGCACAGAAATaGCTGCTCTCAGGCTTCCATTCTCCCAGGGAGAGGGAGTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: PAPGPGDPAVNRAQK*LLSGFHSPREREFT Trigger: CGTGAACTCCCTCTCCCTGGGAGAATGGAAGCCTGAGAGCAGGCATTTCTGTGCCCTGTTCACTGCTGGGTCTCCCGGGCCTGGAGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662154.1 |
||
| CDS GCA 90 bp | GCCTCCAATATGCTGCTTCCACAGAGAAGTCTGTCTTGGAGGGAGTaGAATCATGGTGGAAGGCACCTCTTCTCAGGGTGGCAGGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ASNMLLPQRSLSWRE*NHGGRHLFSGWQER Trigger: TCTCTCCTGCCACCCTGAGAAGAGGTGCCTTCCACCATGATTGCACTCCCTCCAAGACAGACTTCTCTGTGGAAGCAGCATATTGGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488425.1 |
||
| CDS GCA 90 bp | CCCTCCACAGCCATTCCTGTGAACTGTCCTAGCAGGCCTCCAATATaGTGCTTCCACAGAGAAGTCTGTCTTGGAGGGAGTGCAGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSTAIPVNCPSRPPI*CFHREVCLGGSAVP Trigger: TGGAACTGCACTCCCTCCAAGACAGACTTCTCTGTGGAAGCAGCATATTGGAGGCCTGCTAGGACAGTTCACAGGAATGGCTGTGGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654968.1 |
||
| CDS GCA 90 bp | CCCTCCACAGCCATTCCTGTGAACTGTCCTAGCAGGCCTCCAATATaGTGCTTCCACAGAGAAGTCTGTCTTGGAGGGAGTGCAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: PSTAIPVNCPSRPPI*CFHREVCLGGSAIM Trigger: CATGATTGCACTCCCTCCAAGACAGACTTCTCTGTGGAAGCAGCATATTGGAGGCCTGCTAGGACAGTTCACAGGAATGGCTGTGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488425.1 |
||
| CDS GCA 90 bp | TCCACAGCCATTCCTGTGAACTGTCCTAGCAGGCCTCCAATATGCTaGTTCCACAGAGAAGTCTGTCTTGGAGGGAGTGCAGTTCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: STAIPVNCPSRPPIC*FHREVCLGGSAVPR Trigger: CCTTGGAACTGCACTCCCTCCAAGACAGACTTCTCTGTGGAAGCAGCATATTGGAGGCCTGCTAGGACAGTTCACAGGAATGGCTGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654968.1 |
||
| CDS TCA 90 bp | AGGGAAGGACATCAGGAAGGGCAGGCTGGAAACTGCAGCAGGAACTaGAGCTGCTGTCTACAGGTAGAATTTCCCCTTCCTCAGAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: REGHQEGQAGNCSRN*SCCLQVEFPLPQRN Trigger: GTTTCTCTGAGGAAGGGGAAATTCTACCTGTAGACAGCAGCTTCAGTTCCTGCTGCAGTTTCCAGCCTGCCCTTCCTGATGTCCTTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000488425.1 ENST00000654968.1 ENST00000663573.1 |
||
| CDS GCA 90 bp | TCCACAGCCATTCCTGTGAACTGTCCTAGCAGGCCTCCAATATGCTaGTTCCACAGAGAAGTCTGTCTTGGAGGGAGTGCAATCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: STAIPVNCPSRPPIC*FHREVCLGGSAIMV Trigger: CACCATGATTGCACTCCCTCCAAGACAGACTTCTCTGTGGAAGCAGCATATTGGAGGCCTGCTAGGACAGTTCACAGGAATGGCTGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488425.1 |
||
| CDS TCA 90 bp | TCAGAGAAACTTTGGCTCTGTTCTCAAGGCTTTCCACTGATTCGATaGGGCCTATGCAGCTCATTCGGGATCATCTCCATGTCCCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SEKLWLCSQGFPLIR*GLCSSFGIISMSPT Trigger: GGTGGGGGACATGGAGATGATCCCGAATGAGCTGCATAGGCCTCATCGAATCAGTGGAAAGCCTTGAGAACAGAGCCAAAGTTTCTCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000488425.1 ENST00000654968.1 ENST00000663573.1 |
||
| CDS TCA 90 bp | CCCCTTCCTCAGAGAAACTTTGGCTCTGTTCTCAAGGCTTTCCACTaGTTCGATGAGGCCTATGCAGCTCATTCGGGATCATCTCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: PLPQRNFGSVLKAFH*FDEAYAAHSGSSPC Trigger: ACATGGAGATGATCCCGAATGAGCTGCATAGGCCTCATCGAATCAGTGGAAAGCCTTGAGAACAGAGCCAAAGTTTCTCTGAGGAAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000488425.1 ENST00000654968.1 ENST00000663573.1 |
||
| CDS TCA 90 bp | CGCTGTTGGCCAGCACCCTGGTCTCCAAGTGGAATTTTGTTAGTCTaGACTTTTCCTCCAGATATATCACATGGCTGTGTCCTACCCACA | + |
|
Preference number: 5 (lower is better) Translates to: RCWPAPWSPSGILLV*TFPPDISHGCVLPT Trigger: TGTGGGTAGGACACAGCCATGTGATATATCTGGAGGAAAAGTTCAGACTAACAAAATTCCACTTGGAGACCAGGGTGCTGGCCAACAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662154.1 |
||
| CDS GCA 90 bp | TTCGGGATCATCTCCATGTCCCCCACCTTCACTATGACCATAACTTaGACAGTACCCACTTCTTGGTGGAGAAAGTGCAGCTGTCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: FGIISMSPTFTMTIT*TVPTSWWRKCSCQS Trigger: TGATTGACAGCTGCACTTTCTCCACCAAGAAGTGGGTACTGTGCAAGTTATGGTCATAGTGAAGGTGGGGGACATGGAGATGATCCCGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000488425.1 ENST00000654968.1 ENST00000663573.1 |
||
| CDS TCA 90 bp | ATTAACACTAGGAGATTTATTACAAGCAATTGGCTTATGTGGCTATaGGGACTGGCTGGCAAATCTGGAATCCACAGGGAAGGACATCAG | + |
|
Preference number: 5 (lower is better) Translates to: INTRRFITSNWLMWL*GLAGKSGIHREGHQ Trigger: CTGATGTCCTTCCCTGTGGATTCCAGATTTGCCAGCCAGTCCTCATAGCCACATAAGCCAATTGCTTGTAATAAATCTCCTAGTGTTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000488425.1 ENST00000654968.1 ENST00000663573.1 |
||
| CDS CAA 90 bp | ACGGACACGCACGTTCCAGAGGAGGCACAGAGGCGGAGCTCCGATTaGGGAGCGACTCCCCGGTCTGGGGCAGGCAGAGGTGTCCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TDTHVPEEAQRRSSD*GATPRSGAGRGVQL Trigger: GAGCTGGACACCTCTGCCTGCCCCAGACCGGGGAGTCGCTCCCAAATCGGAGCTCCGCCTCTGTGCCTCCTCTGGAACGTGCGTGTCCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663573.1 |
||
| CDS CCA 72 bp | TCCCGGCAGGCCGGGTGTCACTATGCTGTGCTGCATTaGCACTGTGTTCTCCTTACACAGGTGACCTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRQAGCHYAVLH*HCVLLTQVTWA Trigger: TGCCCAGGTCACCTGTGTAAGGAGAACACAGTGCCAATGCAGCACAGCATAGTGACACCCGGCCTGCCGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488425.1 |
||
| CDS CAA 72 bp | ATCCCGGCAGGCCGGGTGTCACTATGCTGTGCTGCATaGGCACTGTGTTCTCCTTACACAGGTGACCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: IPAGRVSLCCAA*ALCSPYTGDLG Trigger: GCCCAGGTCACCTGTGTAAGGAGAACACAGTGCCAATGCAGCACAGCATAGTGACACCCGGCCTGCCGGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488425.1 |
||
| CDS GCA 72 bp | AGACAAGGCAAGTCCATTCCTCCTATGAGCCTGGGATaGTCGACCCTGCATGGGTCACAGTGGCAGCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RQGKSIPPMSLG*STLHGSQWQLQ Trigger: CTGGAGCTGCCACTGTGACCCATGCAGGGTCGAGCATCCCAGGCTCATAGGAGGAATGGACTTGCCTTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488425.1 |
||
| CDS CAA 90 bp | GTCCTAGCAGGCCTCCAATATGCTGCTTCCACAGAGAAGTCTGTCTaGGAGGGAGTGCAATCATGGTGGAAGGCACCTCTTCTCAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VLAGLQYAASTEKSV*EGVQSWWKAPLLRV Trigger: CACCCTGAGAAGAGGTGCCTTCCACCATGATTGCACTCCCTCCAAGACAGACTTCTCTGTGGAAGCAGCATATTGGAGGCCTGCTAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488425.1 |
||
| CDS GCA 72 bp | ATGCTGCTTCCACAGAGAAGTCTGTCTTGGAGGGAGTaGAATCATGGTGGAAGGCACCTCTTCTCAGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: MLLPQRSLSWRE*NHGGRHLFSGW Trigger: CCACCCTGAGAAGAGGTGCCTTCCACCATGATTGCACTCCCTCCAAGACAGACTTCTCTGTGGAAGCAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488425.1 |
||
| CDS CCA 72 bp | GAGTGCAATCATGGTGGAAGGCACCTCTTCTCAGGGTaGCAGGAGAGAGAATTCGAGCTGAGACAAGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: ECNHGGRHLFSG*QEREFELRQGK Trigger: CTTGCCTTGTCTCAGCTCGAATTCTCTCTCCTGCCACCCTGAGAAGAGGTGCCTTCCACCATGATTGCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488425.1 |
||
| CDS CCA 72 bp | ACAGAGAAGTCTGTCTTGGAGGGAGTGCAATCATGGTaGAAGGCACCTCTTCTCAGGGTGGCAGGAGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: TEKSVLEGVQSW*KAPLLRVAGER Trigger: TCTCTCTCCTGCCACCCTGAGAAGAGGTGCCTTCCACCATGATTGCACTCCCTCCAAGACAGACTTCTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488425.1 |
||
| CDS CCA 72 bp | GAGTGCAGTTCCAAGGCCTCAGGAAACTTACAATCATaGTGGAAGGCACCTCTTCTCAGGGTGGCAGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ECSSKASGNLQS*WKAPLLRVAGE Trigger: CTCTCCTGCCACCCTGAGAAGAGGTGCCTTCCACCATGATTGTAAGTTTCCTGAGGCCTTGGAACTGCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654968.1 |
||
| CDS TCA 72 bp | CATCAGGAAGGGCAGGCTGGAAACTGCAGCAGGAACTaGAGCTGCTGTCTACAGGTAGAATTTCCCCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: HQEGQAGNCSRN*SCCLQVEFPLP Trigger: AGGAAGGGGAAATTCTACCTGTAGACAGCAGCTTCAGTTCCTGCTGCAGTTTCCAGCCTGCCCTTCCTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000488425.1 ENST00000654968.1 ENST00000663573.1 |
||
| CDS CCA 72 bp | GCCTCCAATATGCTGCTTCCACAGAGAAGTCTGTCTTaGAGGGAGTGCAATCATGGTGGAAGGCACCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ASNMLLPQRSLS*RECNHGGRHLF Trigger: GAAGAGGTGCCTTCCACCATGATTGCACTCCCTCCAAGACAGACTTCTCTGTGGAAGCAGCATATTGGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488425.1 |
||
| CDS CAA 90 bp | CGAGCTGAGACAAGGCAAGTCCATTCCTCCTATGAGCCTGTTCCCTaGGCAACCGTCAACTCGCTGCTGCAATATTCAAAGGGAATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RAETRQVHSSYEPVP*ATVNSLLQYSKGIS Trigger: TGAGATTCCCTTTGAATATTGCAGCAGCGAGTTGACGGTTGCCAAGGGAACAGGCTCATAGGAGGAATGGACTTGCCTTGTCTCAGCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654968.1 |
||
| CDS CAA 90 bp | GTCCTAGCAGGCCTCCAATATGCTGCTTCCACAGAGAAGTCTGTCTaGGAGGGAGTGCAGTTCCAAGGCCTCAGGAAACTTACAATCATG | + |
|
Preference number: 6 (lower is better) Translates to: VLAGLQYAASTEKSV*EGVQFQGLRKLTIM Trigger: CATGATTGTAAGTTTCCTGAGGCCTTGGAACTGCACTCCCTCCAAGACAGACTTCTCTGTGGAAGCAGCATATTGGAGGCCTGCTAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654968.1 |
||
| CDS CCA 72 bp | CAAGGCAAGTCCATTCCTCCTATGAGCCTGTTCCCTTaGCAACCGTCAACTCGCTGCTGCAATATTCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: QGKSIPPMSLFP*QPSTRCCNIQR Trigger: CCTTTGAATATTGCAGCAGCGAGTTGACGGTTGCCAAGGGAACAGGCTCATAGGAGGAATGGACTTGCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654968.1 |
||
| CDS CCA 72 bp | ACTTACAATCATGGTGGAAGGCACCTCTTCTCAGGGTaGCAGGAGAGAGAATTCGAGCTGAGACAAGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: TYNHGGRHLFSG*QEREFELRQGK Trigger: CTTGCCTTGTCTCAGCTCGAATTCTCTCTCCTGCCACCCTGAGAAGAGGTGCCTTCCACCATGATTGTAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654968.1 |
||
| CDS CCA 72 bp | GCCTCCAATATGCTGCTTCCACAGAGAAGTCTGTCTTaGAGGGAGTGCAGTTCCAAGGCCTCAGGAAACTTA | + |
|
Preference number: 6 (lower is better) Translates to: ASNMLLPQRSLS*RECSSKASGNL Trigger: TAAGTTTCCTGAGGCCTTGGAACTGCACTCCCTCCAAGACAGACTTCTCTGTGGAAGCAGCATATTGGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654968.1 |
||
| CDS TCA 72 bp | CTTTGGCTCTGTTCTCAAGGCTTTCCACTGATTCGATaGGGCCTATGCAGCTCATTCGGGATCATCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: LWLCSQGFPLIR*GLCSSFGIISM Trigger: CATGGAGATGATCCCGAATGAGCTGCATAGGCCTCATCGAATCAGTGGAAAGCCTTGAGAACAGAGCCAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000488425.1 ENST00000654968.1 ENST00000663573.1 |
||
| CDS GCA 72 bp | ATCTCCATGTCCCCCACCTTCACTATGACCATAACTTaGACAGTACCCACTTCTTGGTGGAGAAAGTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ISMSPTFTMTIT*TVPTSWWRKCS Trigger: GCTGCACTTTCTCCACCAAGAAGTGGGTACTGTGCAAGTTATGGTCATAGTGAAGGTGGGGGACATGGAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000488425.1 ENST00000654968.1 ENST00000663573.1 |
||
| CDS GCA 72 bp | TCTGTCATGTCCCCCACCTTCACTATGACCATAACTTaGACAGTACCCACTTCTTGGTGGAGAAAGTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SVMSPTFTMTIT*TVPTSWWRKCS Trigger: GCTGCACTTTCTCCACCAAGAAGTGGGTACTGTGCAAGTTATGGTCATAGTGAAGGTGGGGGACATGACAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662154.1 |
||
| CDS CAA 72 bp | ACAAGGCAAGTCCATTCCTCCTATGAGCCTGTTCCCTaGGCAACCGTCAACTCGCTGCTGCAATATTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TRQVHSSYEPVP*ATVNSLLQYSK Trigger: CTTTGAATATTGCAGCAGCGAGTTGACGGTTGCCAAGGGAACAGGCTCATAGGAGGAATGGACTTGCCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654968.1 |
||
| CDS TCA 72 bp | CAGAGAAACTTTGGCTCTGTTCTCAAGGCTTTCCACTaGTTCGATGAGGCCTATGCAGCTCATTCGGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: QRNFGSVLKAFH*FDEAYAAHSGS Trigger: TGATCCCGAATGAGCTGCATAGGCCTCATCGAATCAGTGGAAAGCCTTGAGAACAGAGCCAAAGTTTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000488425.1 ENST00000654968.1 ENST00000663573.1 |
||
| CDS CCA 72 bp | TTGGTGCCGCTGTTGGCCAGCACCCTGGTCTCCAAGTaGAATTTTGTTAGTCTGAACTTTTCCTCCAGATAT | + |
|
Preference number: 6 (lower is better) Translates to: LVPLLASTLVSK*NFVSLNFSSRY Trigger: ATATCTGGAGGAAAAGTTCAGACTAACAAAATTCCACTTGGAGACCAGGGTGCTGGCCAACAGCGGCACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662154.1 |
||
| CDS CCA 72 bp | TCTATACATGACTTTAGGGATGTTTGGTGCCGCTGTTaGCCAGCACCCTGGTCTCCAAGTGGAATTTTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: SIHDFRDVWCRC*PAPWSPSGILL Trigger: TAACAAAATTCCACTTGGAGACCAGGGTGCTGGCCAACAGCGGCACCAAACATCCCTAAAGTCATGTATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662154.1 |
||
| CDS CCA 72 bp | TTATTACAAGCAATTGGCTTATGTGGCTATGAGGACTaGCTGGCAAATCTGGAATCCACAGGGAAGGACATC | + |
|
Preference number: 6 (lower is better) Translates to: LLQAIGLCGYED*LANLESTGKDI Trigger: GATGTCCTTCCCTGTGGATTCCAGATTTGCCAGCCAGTCCTCATAGCCACATAAGCCAATTGCTTGTAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000488425.1 ENST00000654968.1 ENST00000663573.1 |
||
| CDS TCA 72 bp | AGGAGATTTATTACAAGCAATTGGCTTATGTGGCTATaGGGACTGGCTGGCAAATCTGGAATCCACAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RRFITSNWLMWL*GLAGKSGIHRE Trigger: TTCCCTGTGGATTCCAGATTTGCCAGCCAGTCCTCATAGCCACATAAGCCAATTGCTTGTAATAAATCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000488425.1 ENST00000654968.1 ENST00000663573.1 |
||
| CDS CCA 72 bp | CAGATATATCACATGGCTGTGTCCTACCCACACTTCTaGGGACAATTTAGAAAGGACATGGGCTATGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: QIYHMAVSYPHF*GQFRKDMGYVL Trigger: AAGAACATAGCCCATGTCCTTTCTAAATTGTCCCCAGAAGTGTGGGTAGGACACAGCCATGTGATATATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662154.1 |
||
| CDS CCA 72 bp | ACTATGACCATAACTTGCACAGTACCCACTTCTTGGTaGAGAAAGTGCAGCTGTCAATCAAAAAGACAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: TMTITCTVPTSW*RKCSCQSKRQA Trigger: TGCTTGTCTTTTTGATTGACAGCTGCACTTTCTCCACCAAGAAGTGGGTACTGTGCAAGTTATGGTCATAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000488425.1 ENST00000654968.1 ENST00000662154.1 ENST00000663573.1 |
||
| CDS CAA 72 bp | CTTCACTATGACCATAACTTGCACAGTACCCACTTCTaGGTGGAGAAAGTGCAGCTGTCAATCAAAAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: LHYDHNLHSTHF*VEKVQLSIKKT Trigger: TGTCTTTTTGATTGACAGCTGCACTTTCTCCACCAAGAAGTGGGTACTGTGCAAGTTATGGTCATAGTGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000488425.1 ENST00000654968.1 ENST00000662154.1 ENST00000663573.1 |
||
| CDS CCA 72 bp | TTCACTATGACCATAACTTGCACAGTACCCACTTCTTaGTGGAGAAAGTGCAGCTGTCAATCAAAAAGACAA | + |
|
Preference number: 6 (lower is better) Translates to: FTMTITCTVPTS*WRKCSCQSKRQ Trigger: TTGTCTTTTTGATTGACAGCTGCACTTTCTCCACCAAGAAGTGGGTACTGTGCAAGTTATGGTCATAGTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000488425.1 ENST00000654968.1 ENST00000662154.1 ENST00000663573.1 |
||