Pregenerated sensors for LINC02015 (Homo sapiens)
Ensembl gene IDs: ENSG00000231574Ensembl transcript IDs: ENST00000434309.2, ENST00000436078.5, ENST00000654164.1, ENST00000668196.1
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTTCCAGGGCCCCTGAGAGCACAGGTATGCCTAGGGCTGGAGCCATaGCTGGGCAGCTGCAGCTATGCCTGGGAGCACAGGCTCCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: LPGPLRAQVCLGLEP*LGSCSYAWEHRLPP Trigger: GGGTGGGAGCCTGTGCTCCCAGGCATAGCTGCAGCTGCCCAGCCATGGCTCCAGCCCTAGGCATACCTGTGCTCTCAGGGGCCCTGGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS CCA 90 bp | TGCAACCGGAACTGGCAGCCAGGCCCCCATGCTTCAAGCTGTCCCTaGCTTGAAGGTGAGGTTTCACCAGGGACCCACCCGTTCCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: CNRNWQPGPHASSCP*LEGEVSPGTHPFPP Trigger: AGGTGGGAACGGGTGGGTCCCTGGTGAAACCTCACCTTCAAGCCAGGGACAGCTTGAAGCATGGGGGCCTGGCTGCCAGTTCCGGTTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS GCA 90 bp | CCAGGGACCCACCCGTTCCCACCTAGGAACATGTCTGCCTCTCGCTaGCATCAACATGCCATCCACAGCACCCAGACTGTCCGCACTAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGTHPFPPRNMSASR*HQHAIHSTQTVRTK Trigger: CTTAGTGCGGACAGTCTGGGTGCTGTGGATGGCATGTTGATGGCAGCGAGAGGCAGACATGTTCCTAGGTGGGAACGGGTGGGTCCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS TCA 90 bp | AGAGGGGGCAAAGGCAGTGGGGAGTCTGGTGTATCAGAACTGCCCTaGACACACACACCTGACCACGTCACAACAGCTCCCAGGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RGGKGSGESGVSELP*THTPDHVTTAPRLS Trigger: GCTGAGCCTGGGAGCTGTTGTGACGTGGTCAGGTGTGTGTGTTCAGGGCAGTTCTGATACACCAGACTCCCCACTGCCTTTGCCCCCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS GCA 90 bp | TTTCCAGAGGGGGCAAAGGCAGTGGGGAGTCTGGTGTATCAGAACTaGCCTGAACACACACACCTGACCACGTCACAACAGCTCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FPEGAKAVGSLVYQN*PEHTHLTTSQQLPG Trigger: GCCTGGGAGCTGTTGTGACGTGGTCAGGTGTGTGTGTTCAGGGCAGTTCTGATACACCAGACTCCCCACTGCCTTTGCCCCCTCTGGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS CCA 90 bp | CTAAGGGGTGTCCACAGGCCCACACCTAGCTGCCCTCAGCCGTCCTaGCCTCCCCCACCATCCTTGCTCATTAATATCCAAAGTTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LRGVHRPTPSCPQPS*PPPPSLLINIQSFS Trigger: GCTGAAACTTTGGATATTAATGAGCAAGGATGGTGGGGGAGGCCAGGACGGCTGAGGGCAGCTAGGTGTGGGCCTGTGGACACCCCTTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS GCA 90 bp | ACAGCTCCCAGGCTCAGCTATCACAACACATCCACAACTTTGCTCTaGCACAGAGCAGGTGCCAGCAGTGGAAAGAGGCCAGGGAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: TAPRLSYHNTSTTLL*HRAGASSGKRPGNG Trigger: CCCATTCCCTGGCCTCTTTCCACTGCTGGCACCTGCTCTGTGGCAGAGCAAAGTTGTGGATGTGTTGTGATAGCTGAGCCTGGGAGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS TCA 90 bp | TGGGAGGATCGCTTGAGCCCAGAAGTTCATGGCAGCAGTGAGCTATaGTTACACTGCTGCACTCCAACCAGGGCGATAGACCCCTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: WEDRLSPEVHGSSEL*LHCCTPTRAIDPFR Trigger: ACGGAAGGGGTCTATCGCCCTGGTTGGAGTGCAGCAGTGTAATCATAGCTCACTGCTGCCATGAACTTCTGGGCTCAAGCGATCCTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS TCA 90 bp | TGGGAGGATCGCTTGAGCCCAGAAGTTCATGGCAGCAGTGAGCTATaGTTACACTGCTGCACTCCAACCAGGGCGATAGACCCCCTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: WEDRLSPEVHGSSEL*LHCCTPTRAIDPLL Trigger: TAGGAGGGGGTCTATCGCCCTGGTTGGAGTGCAGCAGTGTAATCATAGCTCACTGCTGCCATGAACTTCTGGGCTCAAGCGATCCTCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000434309.2 ENST00000654164.1 |
||
| CDS GCA 90 bp | CAGCTATCACAACACATCCACAACTTTGCTCTGCCACAGAGCAGGTaGCAGCAGTGGAAAGAGGCCAGGGAATGGGAGCAGGCACTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QLSQHIHNFALPQSR*QQWKEAREWEQALP Trigger: TGGAAGTGCCTGCTCCCATTCCCTGGCCTCTTTCCACTGCTGGCACCTGCTCTGTGGCAGAGCAAAGTTGTGGATGTGTTGTGATAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS CCA 90 bp | ACATCAATGAAGTTTTCACTCCAGGTCACAGACTGCAACCGGAACTaGCAGCCAGGCCCCCATGCTTCAAGCTGTCCCTGGCTTGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: TSMKFSLQVTDCNRN*QPGPHASSCPWLEG Trigger: ACCTTCAAGCCAGGGACAGCTTGAAGCATGGGGGCCTGGCTGCCAGTTCCGGTTGCAGTCTGTGACCTGGAGTGAAAACTTCATTGATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS TCA 90 bp | TGGGAGGATCGCTTGAGCCCAGAAGTTCATGGCAGCAGTGAGCTATaGTTACACTGCTGCACTCCAACCAGGGCGATAGACCTTTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: WEDRLSPEVHGSSEL*LHCCTPTRAIDLSV Trigger: TACAGAAAGGTCTATCGCCCTGGTTGGAGTGCAGCAGTGTAATCATAGCTCACTGCTGCCATGAACTTCTGGGCTCAAGCGATCCTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668196.1 |
||
| CDS CCA 90 bp | GAGTGTCAGAGTCTGACTGAGTCTGGGGTTTTCATGGGCTCAGAATaGAGGAAGTACATACTGCTTGGTCCATGGGCAGCCATTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ECQSLTESGVFMGSE*RKYILLGPWAAICG Trigger: CCCACAAATGGCTGCCCATGGACCAAGCAGTATGTACTTCCTCCATTCTGAGCCCATGAAAACCCCAGACTCAGTCAGACTCTGACACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000434309.2 ENST00000436078.5 ENST00000668196.1 |
||
| CDS TCA 90 bp | TGTGGGTCTGGAAAAAGCACCATCCAATTGGCTGAAAGACATCAATaGAGTTTTCACTCCAGGTCACAGACTGCAACCGGAACTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CGSGKSTIQLAERHQ*SFHSRSQTATGTGS Trigger: GCTGCCAGTTCCGGTTGCAGTCTGTGACCTGGAGTGAAAACTTCATTGATGTCTTTCAGCCAATTGGATGGTGCTTTTTCCAGACCCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS CCA 90 bp | GTTTTCATGGGCTCAGAATGGAGGAAGTACATACTGCTTGGTCCATaGGCAGCCATTTGTGGGTCTGGAAAAAGCACCATCCAATTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VFMGSEWRKYILLGP*AAICGSGKSTIQLA Trigger: AGCCAATTGGATGGTGCTTTTTCCAGACCCACAAATGGCTGCCCATGGACCAAGCAGTATGTACTTCCTCCATTCTGAGCCCATGAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS CCA 90 bp | GTTTTCATGGGCTCAGAATGGAGGAAGTACATACTGCTTGGTCCATaGGCAGCCATTTGTGGGTCTGGAAAAAGCACCATCCAATTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VFMGSEWRKYILLGP*AAICGSGKSTIQLV Trigger: GACCAATTGGATGGTGCTTTTTCCAGACCCACAAATGGCTGCCCATGGACCAAGCAGTATGTACTTCCTCCATTCTGAGCCCATGAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434309.2 |
||
| CDS TCA 90 bp | GTAGATCCTATTTGCAGGCTTGTCATCCTGATGAGTGTCAGAGTCTaGCTGAGTCTGGGGTTTTCATGGGCTCAGAATGGAGGAAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: VDPICRLVILMSVRV*LSLGFSWAQNGGST Trigger: TGTACTTCCTCCATTCTGAGCCCATGAAAACCCCAGACTCAGTCAGACTCTGACACTCATCAGGATGACAAGCCTGCAAATAGGATCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000434309.2 ENST00000436078.5 ENST00000668196.1 |
||
| CDS TCA 90 bp | ATGGGCAGCCATTTGTGGGTCTGGAAAAAGCACCATCCAATTGGATaGAATAGGGTTTCTTTTAAGACCCTTACGATGAGGCACGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: MGSHLWVWKKHHPIG*NRVSFKTLTMRHGG Trigger: GCCACCGTGCCTCATCGTAAGGGTCTTAAAAGAAACCCTATTTCATCCAATTGGATGGTGCTTTTTCCAGACCCACAAATGGCTGCCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668196.1 |
||
| CDS CCA 90 bp | GTTTTCATGGGCTCAGAATGGAGGAAGTACATACTGCTTGGTCCATaGGCAGCCATTTGTGGGTCTGGAAAAAGCACCATCCAATTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VFMGSEWRKYILLGP*AAICGSGKSTIQLD Trigger: ATCCAATTGGATGGTGCTTTTTCCAGACCCACAAATGGCTGCCCATGGACCAAGCAGTATGTACTTCCTCCATTCTGAGCCCATGAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668196.1 |
||
| CDS TCA 90 bp | ATGGGCAGCCATTTGTGGGTCTGGAAAAAGCACCATCCAATTGGCTaGAAGACATCAATGAAGTTTTCACTCCAGGTCACAGACTGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: MGSHLWVWKKHHPIG*KTSMKFSLQVTDCN Trigger: GTTGCAGTCTGTGACCTGGAGTGAAAACTTCATTGATGTCTTTCAGCCAATTGGATGGTGCTTTTTCCAGACCCACAAATGGCTGCCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS GCA 90 bp | CAGGGCGATAGACCTTTCTGTAGAATCTTTGTGGTTTCCAATCCCTaGATGACTTCCCAGCACTTCTGCATCACTCTTCCCCTTATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QGDRPFCRIFVVSNP*MTSQHFCITLPLIL Trigger: AAGAATAAGGGGAAGAGTGATGCAGAAGTGCTGGGAAGTCATGCAGGGATTGGAAACCACAAAGATTCTACAGAAAGGTCTATCGCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668196.1 |
||
| CDS TCA 90 bp | GCGATAGACCTTTCTGTAGAATCTTTGTGGTTTCCAATCCCTGCATaGCTTCCCAGCACTTCTGCATCACTCTTCCCCTTATTCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AIDLSVESLWFPIPA*LPSTSASLFPLFFS Trigger: AGAGAAGAATAAGGGGAAGAGTGATGCAGAAGTGCTGGGAAGTCATGCAGGGATTGGAAACCACAAAGATTCTACAGAAAGGTCTATCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668196.1 |
||
| CDS GCA 90 bp | TCAATTTTGTATTCCTCCCAATCCTTCAAAGTTGAGCCTGCTGACTaGATGTACTCAAAAGCTGTAGGTAAATGCTCACACTCACCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SILYSSQSFKVEPAD*MYSKAVGKCSHSPS Trigger: AGATGGTGAGTGTGAGCATTTACCTACAGCTTTTGAGTACATGCAGTCAGCAGGCTCAACTTTGAAGGATTGGGAGGAATACAAAATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS CCA 90 bp | GGCTCTCTCAGATCTTTTCTATGGATTCACCCAATCCACACTTCTTaGATGGGTGGAGAAGAAATTCTGATGATTGTGTGTCTTCTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GSLRSFLWIHPIHTS*MGGEEILMIVCLLL Trigger: TAAGAGAAGACACACAATCATCAGAATTTCTTCTCCACCCATCCAAGAAGTGTGGATTGGGTGAATCCATAGAAAAGATCTGAGAGAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS CCA 90 bp | AATTCTGATGATTGTGTGTCTTCTCTTAAATCCACAAAACCAAACTaGGTCCTGAAAGCTTTCTGTTTGTTTCCTCTAGGACAGTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: NSDDCVSSLKSTKPN*VLKAFCLFPLGQCP Trigger: AGGGCACTGTCCTAGAGGAAACAAACAGAAAGCTTTCAGGACCCAGTTTGGTTTTGTGGATTTAAGAGAAGACACACAATCATCAGAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS TCA 90 bp | TTGGGTACCAGAAAATTATGTTCCTTTGGTGGTACTAGGTGTCCTTaGTTTTTCATGTTCCTCAAAGTCTTGCACTGCTGTCTTCACATT | + |
|
Preference number: 5 (lower is better) Translates to: LGTRKLCSFGGTRCP*FFMFLKVLHCCLHI Trigger: AATGTGAAGACAGCAGTGCAAGACTTTGAGGAACATGAAAAATCAAGGACACCTAGTACCACCAAAGGAACATAATTTTCTGGTACCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS GCA 90 bp | TTGGTGGTACTAGGTGTCCTTGATTTTTCATGTTCCTCAAAGTCTTaGACTGCTGTCTTCACATTTGAAGAAAGAGTCACTTTCTCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: LVVLGVLDFSCSSKS*TAVFTFEERVTFSS Trigger: ACTAGAGAAAGTGACTCTTTCTTCAAATGTGAAGACAGCAGTGCAAGACTTTGAGGAACATGAAAAATCAAGGACACCTAGTACCACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS CCA 90 bp | CAGATCTTTTCTATGGATTCACCCAATCCACACTTCTTGGATGGGTaGAGAAGAAATTCTGATGATTGTGTGTCTTCTCTTAAATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: QIFSMDSPNPHFLDG*RRNSDDCVSSLKST Trigger: TGTGGATTTAAGAGAAGACACACAATCATCAGAATTTCTTCTCCACCCATCCAAGAAGTGTGGATTGGGTGAATCCATAGAAAAGATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS GCA 72 bp | CAGGTATGCCTAGGGCTGGAGCCATGGCTGGGCAGCTaGAGCTATGCCTGGGAGCACAGGCTCCCACCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QVCLGLEPWLGS*SYAWEHRLPPH Trigger: GTGGGGTGGGAGCCTGTGCTCCCAGGCATAGCTGCAGCTGCCCAGCCATGGCTCCAGCCCTAGGCATACCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS CAA 72 bp | GGCAGCCAGGCCCCCATGCTTCAAGCTGTCCCTGGCTaGAAGGTGAGGTTTCACCAGGGACCCACCCGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GSQAPMLQAVPG*KVRFHQGPTRS Trigger: GGAACGGGTGGGTCCCTGGTGAAACCTCACCTTCAAGCCAGGGACAGCTTGAAGCATGGGGGCCTGGCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS CAA 90 bp | ACCGGAACTGGCAGCCAGGCCCCCATGCTTCAAGCTGTCCCTGGCTaGAAGGTGAGGTTTCACCAGGGACCCACCCGTTCCCACCTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: TGTGSQAPMLQAVPG*KVRFHQGPTRSHLG Trigger: TCCTAGGTGGGAACGGGTGGGTCCCTGGTGAAACCTCACCTTCAAGCCAGGGACAGCTTGAAGCATGGGGGCCTGGCTGCCAGTTCCGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS GCA 72 bp | CACCCGTTCCCACCTAGGAACATGTCTGCCTCTCGCTaGCATCAACATGCCATCCACAGCACCCAGACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: HPFPPRNMSASR*HQHAIHSTQTV Trigger: GACAGTCTGGGTGCTGTGGATGGCATGTTGATGGCAGCGAGAGGCAGACATGTTCCTAGGTGGGAACGGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS CCA 72 bp | AAGTTTTCACTCCAGGTCACAGACTGCAACCGGAACTaGCAGCCAGGCCCCCATGCTTCAAGCTGTCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KFSLQVTDCNRN*QPGPHASSCPW Trigger: CCAGGGACAGCTTGAAGCATGGGGGCCTGGCTGCCAGTTCCGGTTGCAGTCTGTGACCTGGAGTGAAAACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS GCA 72 bp | GGGGCAAAGGCAGTGGGGAGTCTGGTGTATCAGAACTaGCCTGAACACACACACCTGACCACGTCACAACAG | + |
|
Preference number: 6 (lower is better) Translates to: GAKAVGSLVYQN*PEHTHLTTSQQ Trigger: CTGTTGTGACGTGGTCAGGTGTGTGTGTTCAGGGCAGTTCTGATACACCAGACTCCCCACTGCCTTTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS TCA 72 bp | GGAGGATCGCTTGAGCCCAGAAGTTCATGGCAGCAGTaGGCTATGATTACACTGCTGCACTCCAACCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GGSLEPRSSWQQ*AMITLLHSNQG Trigger: GCCCTGGTTGGAGTGCAGCAGTGTAATCATAGCTCACTGCTGCCATGAACTTCTGGGCTCAAGCGATCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000434309.2 ENST00000436078.5 ENST00000654164.1 ENST00000668196.1 |
||
| CDS TCA 72 bp | AAAGGCAGTGGGGAGTCTGGTGTATCAGAACTGCCCTaGACACACACACCTGACCACGTCACAACAGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: KGSGESGVSELP*THTPDHVTTAP Trigger: GGGAGCTGTTGTGACGTGGTCAGGTGTGTGTGTTCAGGGCAGTTCTGATACACCAGACTCCCCACTGCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS CAA 72 bp | GCTCCCAGGCTCAGCTATCACAACACATCCACAACTTaGCTCTGCCACAGAGCAGGTGCCAGCAGTGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: APRLSYHNTSTT*LCHRAGASSGK Trigger: CTTTCCACTGCTGGCACCTGCTCTGTGGCAGAGCAAAGTTGTGGATGTGTTGTGATAGCTGAGCCTGGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS TCA 72 bp | CGCTTGAGCCCAGAAGTTCATGGCAGCAGTGAGCTATaGTTACACTGCTGCACTCCAACCAGGGCGATAGAC | + |
|
Preference number: 6 (lower is better) Translates to: RLSPEVHGSSEL*LHCCTPTRAID Trigger: GTCTATCGCCCTGGTTGGAGTGCAGCAGTGTAATCATAGCTCACTGCTGCCATGAACTTCTGGGCTCAAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000434309.2 ENST00000436078.5 ENST00000654164.1 ENST00000668196.1 |
||
| CDS TCA 72 bp | GTCTGGTGTATCAGAACTGCCCTGAACACACACACCTaGCCACGTCACAACAGCTCCCAGGCTCAGCTATCA | + |
|
Preference number: 6 (lower is better) Translates to: VWCIRTALNTHT*PRHNSSQAQLS Trigger: TGATAGCTGAGCCTGGGAGCTGTTGTGACGTGGTCAGGTGTGTGTGTTCAGGGCAGTTCTGATACACCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS GCA 72 bp | AGGCTCAGCTATCACAACACATCCACAACTTTGCTCTaGCACAGAGCAGGTGCCAGCAGTGGAAAGAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RLSYHNTSTTLL*HRAGASSGKRP Trigger: TGGCCTCTTTCCACTGCTGGCACCTGCTCTGTGGCAGAGCAAAGTTGTGGATGTGTTGTGATAGCTGAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS CCA 72 bp | AGTTGCAGGGAGATGCTACAGATATGGTGTCCCAAGTaGTTCATGGGTGGGCCTCCTGATGGGCTCTGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SCREMLQIWCPK*FMGGPPDGLCE Trigger: TTCACAGAGCCCATCAGGAGGCCCACCCATGAACCACTTGGGACACCATATCTGTAGCATCTCCCTGCAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS GCA 72 bp | AAGACATCAATGAAGTTTTCACTCCAGGTCACAGACTaGAACCGGAACTGGCAGCCAGGCCCCCATGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: KTSMKFSLQVTD*NRNWQPGPHAS Trigger: TGAAGCATGGGGGCCTGGCTGCCAGTTCCGGTTGCAGTCTGTGACCTGGAGTGAAAACTTCATTGATGTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS GCA 72 bp | GGGTTTTCATGGGCTCAGAATGGAGGAAGTACATACTaGTTGGTCCATGGGCAGCCATTTGTGGGTCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GFSWAQNGGSTY*LVHGQPFVGLE Trigger: TTCCAGACCCACAAATGGCTGCCCATGGACCAAGCAGTATGTACTTCCTCCATTCTGAGCCCATGAAAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000434309.2 ENST00000436078.5 ENST00000668196.1 |
||
| CDS CCA 72 bp | GGCTCAGAATGGAGGAAGTACATACTGCTTGGTCCATaGGCAGCCATTTGTGGGTCTGGAAAAAGCACCATC | + |
|
Preference number: 6 (lower is better) Translates to: GSEWRKYILLGP*AAICGSGKSTI Trigger: GATGGTGCTTTTTCCAGACCCACAAATGGCTGCCCATGGACCAAGCAGTATGTACTTCCTCCATTCTGAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000434309.2 ENST00000436078.5 ENST00000668196.1 |
||
| CDS TCA 72 bp | ATTTGCAGGCTTGTCATCCTGATGAGTGTCAGAGTCTaGCTGAGTCTGGGGTTTTCATGGGCTCAGAATGGA | + |
|
Preference number: 6 (lower is better) Translates to: ICRLVILMSVRV*LSLGFSWAQNG Trigger: TCCATTCTGAGCCCATGAAAACCCCAGACTCAGTCAGACTCTGACACTCATCAGGATGACAAGCCTGCAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000434309.2 ENST00000436078.5 ENST00000668196.1 |
||
| CDS CCA 72 bp | TTTCATGGGCTCAGAATGGAGGAAGTACATACTGCTTaGTCCATGGGCAGCCATTTGTGGGTCTGGAAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: FHGLRMEEVHTA*SMGSHLWVWKK Trigger: CTTTTTCCAGACCCACAAATGGCTGCCCATGGACCAAGCAGTATGTACTTCCTCCATTCTGAGCCCATGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000434309.2 ENST00000436078.5 ENST00000668196.1 |
||
| CDS CAA 72 bp | GAGGAAGTACATACTGCTTGGTCCATGGGCAGCCATTaGTGGGTCTGGAAAAAGCACCATCCAATTGGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: EEVHTAWSMGSH*WVWKKHHPIGH Trigger: ATGACCAATTGGATGGTGCTTTTTCCAGACCCACAAATGGCTGCCCATGGACCAAGCAGTATGTACTTCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434309.2 |
||
| CDS GCA 72 bp | AGACCTTTCTGTAGAATCTTTGTGGTTTCCAATCCCTaGATGACTTCCCAGCACTTCTGCATCACTCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RPFCRIFVVSNP*MTSQHFCITLP Trigger: GGGAAGAGTGATGCAGAAGTGCTGGGAAGTCATGCAGGGATTGGAAACCACAAAGATTCTACAGAAAGGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668196.1 |
||
| CDS CCA 72 bp | GCTGGATACTCACTCATTATACTCTCCTTTTCCCCATaGGAGAAATTGCCTGCTGAAGGGAGTCTATCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AGYSLIILSFSP*EKLPAEGSLSW Trigger: CCAAGATAGACTCCCTTCAGCAGGCAATTTCTCCCATGGGGAAAAGGAGAGTATAATGAGTGAGTATCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS CCA 72 bp | CATACTGCTTGGTCCATGGGCAGCCATTTGTGGGTCTaGAAAAAGCACCATCCAATTGGTCATTATACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: HTAWSMGSHLWV*KKHHPIGHYTL Trigger: GAGAGTATAATGACCAATTGGATGGTGCTTTTTCCAGACCCACAAATGGCTGCCCATGGACCAAGCAGTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434309.2 |
||
| CDS CAA 72 bp | TTTTCATGGGCTCAGAATGGAGGAAGTACATACTGCTaGGTCCATGGGCAGCCATTTGTGGGTCTGGAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: FSWAQNGGSTYC*VHGQPFVGLEK Trigger: TTTTTCCAGACCCACAAATGGCTGCCCATGGACCAAGCAGTATGTACTTCCTCCATTCTGAGCCCATGAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000434309.2 ENST00000436078.5 ENST00000668196.1 |
||
| CDS CAA 72 bp | TCAGTGGAGTGCATACCCAAAATGGGTAGATCCTATTaGCAGGCTTGTCATCCTGATGAGTGTCAGAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SVECIPKMGRSY*QACHPDECQSL Trigger: CAGACTCTGACACTCATCAGGATGACAAGCCTGCAAATAGGATCTACCCATTTTGGGTATGCACTCCACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000434309.2 ENST00000436078.5 ENST00000668196.1 |
||
| CDS TCA 72 bp | CTCTGTGAAATGCTTCAAAGGATATGTACCCTGTACTaGGTTTCAAGTCCTGGTTGCTGTGAGTCCTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LCEMLQRICTLY*VSSPGCCESSP Trigger: AGGAGAGGACTCACAGCAACCAGGACTTGAAACTCAGTACAGGGTACATATCCTTTGAAGCATTTCACAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS GCA 72 bp | CACTCATTATACTCTCCTTTTCCCCATGGGAGAAATTaGCTGCTGAAGGGAGTCTATCTTGGCACTAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: HSLYSPFPHGRN*LLKGVYLGTKK Trigger: CTTCTTAGTGCCAAGATAGACTCCCTTCAGCAGGCAATTTCTCCCATGGGGAAAAGGAGAGTATAATGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS GCA 72 bp | TGGTCATTATACTCTCCTTTTCCCCATGGGAGAAATTaGCTGCTGAAGGGAGTCTATCTTGGCACTAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: WSLYSPFPHGRN*LLKGVYLGTKK Trigger: CTTCTTAGTGCCAAGATAGACTCCCTTCAGCAGGCAATTTCTCCCATGGGGAAAAGGAGAGTATAATGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434309.2 |
||
| CDS TCA 72 bp | CCACTTAGCCATGCTAATACCCTCAATATTCTGAGTTaGGTGAAAGAAAGATGGGCTTCTTGGGATGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PLSHANTLNILS*VKERWASWDVP Trigger: AGGCACATCCCAAGAAGCCCATCTTTCTTTCACTCAACTCAGAATATTGAGGGTATTAGCATGGCTAAGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS GCA 72 bp | TATTCCTCCCAATCCTTCAAAGTTGAGCCTGCTGACTaGATGTACTCAAAAGCTGTAGGTAAATGCTCACAC | + |
|
Preference number: 6 (lower is better) Translates to: YSSQSFKVEPAD*MYSKAVGKCSH Trigger: GTGTGAGCATTTACCTACAGCTTTTGAGTACATGCAGTCAGCAGGCTCAACTTTGAAGGATTGGGAGGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS GCA 72 bp | GTCAAGATCAAGTTTGCATTCCCTTCCGTGCCAAAGTaGTCTCTTTTCCTACAATTTTCTTCCCGGCTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: VKIKFAFPSVPK*SLFLQFSSRLL Trigger: TAACAGCCGGGAAGAAAATTGTAGGAAAAGAGAGCACTTTGGCACGGAAGGGAATGCAAACTTGATCTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668196.1 |
||
| CDS CCA 72 bp | CAGCCATTTGTGGGTCTGGAAAAAGCACCATCCAATTaGCTGAAAGACATCAATGAAGTTTTCACTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: QPFVGLEKAPSN*LKDINEVFTPG Trigger: ACCTGGAGTGAAAACTTCATTGATGTCTTTCAGCCAATTGGATGGTGCTTTTTCCAGACCCACAAATGGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS CAA 72 bp | CAATATTCTGAGTTGAGTGAAAGAAAGATGGGCTTCTaGGGATGTGCCTCACACAGCTGGAAAAGCTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: QYSELSERKMGF*GCASHSWKSWI Trigger: TATCCAGCTTTTCCAGCTGTGTGAGGCACATCCCAAGAAGCCCATCTTTCTTTCACTCAACTCAGAATATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS CAA 72 bp | TCCACAAAACCAAACTGGGTCCTGAAAGCTTTCTGTTaGTTTCCTCTAGGACAGTGCCCTGAAATGCTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: STKPNWVLKAFC*FPLGQCPEMLN Trigger: ATTGAGCATTTCAGGGCACTGTCCTAGAGGAAACAAACAGAAAGCTTTCAGGACCCAGTTTGGTTTTGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS TCA 72 bp | CATTTGTGGGTCTGGAAAAAGCACCATCCAATTGGCTaGAAGACATCAATGAAGTTTTCACTCCAGGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: HLWVWKKHHPIG*KTSMKFSLQVT Trigger: TGTGACCTGGAGTGAAAACTTCATTGATGTCTTTCAGCCAATTGGATGGTGCTTTTTCCAGACCCACAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436078.5 |
||
| CDS GCA 72 bp | GGTGATGCAGGTAATTGTTCTTCTTACTCCCTTGAATaGATCTACTCCCAGATATTTTTCTCCAACGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GDAGNCSSYSLE*IYSQIFFSNGV Trigger: CACACCGTTGGAGAAAAATATCTGGGAGTAGATGCATTCAAGGGAGTAAGAAGAACAATTACCTGCATCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000434309.2 ENST00000436078.5 ENST00000654164.1 |
||
| CDS GCA 72 bp | GTCCTGAAAGCTTTCTGTTTGTTTCCTCTAGGACAGTaGCCTGAAATGCTCAATTTTGTATTCCTCCCAATC | + |
|
Preference number: 6 (lower is better) Translates to: VLKAFCLFPLGQ*PEMLNFVFLPI Trigger: GATTGGGAGGAATACAAAATTGAGCATTTCAGGGCACTGTCCTAGAGGAAACAAACAGAAAGCTTTCAGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS CAA 72 bp | GCAGCCATTTGTGGGTCTGGAAAAAGCACCATCCAATaGGATGAAATAGGGTTTCTTTTAAGACCCTTACGA | + |
|
Preference number: 6 (lower is better) Translates to: AAICGSGKSTIQ*DEIGFLLRPLR Trigger: TCGTAAGGGTCTTAAAAGAAACCCTATTTCATCCAATTGGATGGTGCTTTTTCCAGACCCACAAATGGCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668196.1 |
||
| CDS CAA 90 bp | AGGCTCTCTCAGATCTTTTCTATGGATTCACCCAATCCACACTTCTaGGATGGGTGGAGAAGAAATTCTGATGATTGTGTGTCTTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RLSQIFSMDSPNPHF*DGWRRNSDDCVSSL Trigger: AAGAGAAGACACACAATCATCAGAATTTCTTCTCCACCCATCCAAGAAGTGTGGATTGGGTGAATCCATAGAAAAGATCTGAGAGAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS TCA 72 bp | GAAAGCTTTCTGTTTGTTTCCTCTAGGACAGTGCCCTaGAATGCTCAATTTTGTATTCCTCCCAATCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: ESFLFVSSRTVP*NAQFCIPPNPS Trigger: TGAAGGATTGGGAGGAATACAAAATTGAGCATTTCAGGGCACTGTCCTAGAGGAAACAAACAGAAAGCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS CAA 72 bp | CAGATCTTTTCTATGGATTCACCCAATCCACACTTCTaGGATGGGTGGAGAAGAAATTCTGATGATTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: QIFSMDSPNPHF*DGWRRNSDDCV Trigger: CACACAATCATCAGAATTTCTTCTCCACCCATCCAAGAAGTGTGGATTGGGTGAATCCATAGAAAAGATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS CAA 90 bp | TCTCTTAAATCCACAAAACCAAACTGGGTCCTGAAAGCTTTCTGTTaGTTTCCTCTAGGACAGTGCCCTGAAATGCTCAATTTTGTATTC | + |
|
Preference number: 6 (lower is better) Translates to: SLKSTKPNWVLKAFC*FPLGQCPEMLNFVF Trigger: GAATACAAAATTGAGCATTTCAGGGCACTGTCCTAGAGGAAACAAACAGAAAGCTTTCAGGACCCAGTTTGGTTTTGTGGATTTAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS CCA 72 bp | AGATCTTTTCTATGGATTCACCCAATCCACACTTCTTaGATGGGTGGAGAAGAAATTCTGATGATTGTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RSFLWIHPIHTS*MGGEEILMIVC Trigger: ACACACAATCATCAGAATTTCTTCTCCACCCATCCAAGAAGTGTGGATTGGGTGAATCCATAGAAAAGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS CAA 72 bp | CATGTTCCTCAAAGTCTTGCACTGCTGTCTTCACATTaGAAGAAAGAGTCACTTTCTCTAGTCTTTACTGAC | + |
|
Preference number: 6 (lower is better) Translates to: HVPQSLALLSSH*KKESLSLVFTD Trigger: GTCAGTAAAGACTAGAGAAAGTGACTCTTTCTTCAAATGTGAAGACAGCAGTGCAAGACTTTGAGGAACATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS CAA 90 bp | GTATCTCCATTTCTTTGTGGTTGGGTACCAGAAAATTATGTTCCTTaGGTGGTACTAGGTGTCCTTGATTTTTCATGTTCCTCAAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VSPFLCGWVPENYVP*VVLGVLDFSCSSKS Trigger: AGACTTTGAGGAACATGAAAAATCAAGGACACCTAGTACCACCAAAGGAACATAATTTTCTGGTACCCAACCACAAAGAAATGGAGATAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS TCA 72 bp | TCTCTTTCTTTTTCTGAGACTCCCATAGTGCATATATaGCTACTCTTCATGGTGTTGCATCAATCGCATAAG | + |
|
Preference number: 6 (lower is better) Translates to: SLSFSETPIVHI*LLFMVLHQSHK Trigger: CTTATGCGATTGATGCAACACCATGAAGAGTAGTCATATATGCACTATGGGAGTCTCAGAAAAAGAAAGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS CAA 72 bp | TTTCTTTGTGGTTGGGTACCAGAAAATTATGTTCCTTaGGTGGTACTAGGTGTCCTTGATTTTTCATGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: FLCGWVPENYVP*VVLGVLDFSCS Trigger: GGAACATGAAAAATCAAGGACACCTAGTACCACCAAAGGAACATAATTTTCTGGTACCCAACCACAAAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS CCA 72 bp | TGTCAGACAATTTGTGTATCTCCATTTCTTTGTGGTTaGGTACCAGAAAATTATGTTCCTTTGGTGGTACTA | + |
|
Preference number: 6 (lower is better) Translates to: CQTICVSPFLCG*VPENYVPLVVL Trigger: TAGTACCACCAAAGGAACATAATTTTCTGGTACCCAACCACAAAGAAATGGAGATACACAAATTGTCTGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS CAA 90 bp | ATTGTTGTGAATTCTTTGTCAGACAATTTGTGTATCTCCATTTCTTaGTGGTTGGGTACCAGAAAATTATGTTCCTTTGGTGGTACTAGG | + |
|
Preference number: 6 (lower is better) Translates to: IVVNSLSDNLCISIS*WLGTRKLCSFGGTR Trigger: CCTAGTACCACCAAAGGAACATAATTTTCTGGTACCCAACCACAAAGAAATGGAGATACACAAATTGTCTGACAAAGAATTCACAACAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||
| CDS CAA 72 bp | CTTAAAACAATTGTTGTGAATTCTTTGTCAGACAATTaGTGTATCTCCATTTCTTTGTGGTTGGGTACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LKTIVVNSLSDN*CISISLWLGTR Trigger: TCTGGTACCCAACCACAAAGAAATGGAGATACACAAATTGTCTGACAAAGAATTCACAACAATTGTTTTAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436078.5 ENST00000654164.1 |
||