Pregenerated sensors for LINC02011 (Homo sapiens)
Ensembl gene IDs: ENSG00000260902Ensembl transcript IDs: ENST00000566553.1
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCAGTCTCCTCATTGTGTGCCGGGCTATGTTCTCCGTGCTGGAGGTaGAGCAGCCACCAGGGAAGATCCAGCCCTGCCCTCCCGGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: SVSSLCAGLCSPCWR*SSHQGRSSPALPGL Trigger: CAACCCCGGGAGGGCAGGGCTGGATCTTCCCTGGTGGCTGCTCCACCTCCAGCACGGAGAACATAGCCCGGCACACAATGAGGAGACTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 90 bp | TGCAGGGTGCTTATGGTACTGGGAGCACCAGTGGCCCAACCAGCTTaGGGAGGCCCTGAACCCTCACCTACGCAGACAGGCAGGGAGCGT | + |
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Preference number: 5 (lower is better) Translates to: CRVLMVLGAPVAQPA*GGPEPSPTQTGRER Trigger: ACGCTCCCTGCCTGTCTGCGTAGGTGAGGGTTCAGGGCCTCCTCAAGCTGGTTGGGCCACTGGTGCTCCCAGTACCATAAGCACCCTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 90 bp | AGCTCCATGGCTATGCAACCAGTGTGGCCACACTGGGCCCCACATTaGGGAGGGCCCTGTGCTTGGCTCAGACCCCCACATGCTGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: SSMAMQPVWPHWAPH*GGPCAWLRPPHAAV Trigger: CACTGCAGCATGTGGGGGTCTGAGCCAAGCACAGGGCCCTCCTCAATGTGGGGCCCAGTGTGGCCACACTGGTTGCATAGCCATGGAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CCA 90 bp | CTTCTCTCAGTCTCCTCATTGTGTGCCGGGCTATGTTCTCCGTGCTaGAGGTGGAGCAGCCACCAGGGAAGATCCAGCCCTGCCCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: LLSVSSLCAGLCSPC*RWSSHQGRSSPALP Trigger: CGGGAGGGCAGGGCTGGATCTTCCCTGGTGGCTGCTCCACCTCCAGCACGGAGAACATAGCCCGGCACACAATGAGGAGACTGAGAGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 90 bp | TTCTGCAAAGCCAGCCCACAAGGGAAGGGTCGGCCCTGTGAGGACTaGGCTTCCCGTCCCCAGGATTCAAGGACAGGTGGCTGTCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: FCKASPQGKGRPCED*ASRPQDSRTGGCQR Trigger: CCTCTGACAGCCACCTGTCCTTGAATCCTGGGGACGGGAAGCTCAGTCCTCACAGGGCCGACCCTTCCCTTGTGGGCTGGCTTTGCAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 90 bp | ACCTCTGTTCTGCAAAGCCAGCCCACAAGGGAAGGGTCGGCCCTGTaGGGACTGAGCTTCCCGTCCCCAGGATTCAAGGACAGGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: TSVLQSQPTREGSAL*GLSFPSPGFKDRWL Trigger: CAGCCACCTGTCCTTGAATCCTGGGGACGGGAAGCTCAGTCCTCACAGGGCCGACCCTTCCCTTGTGGGCTGGCTTTGCAGAACAGAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CCA 90 bp | CCGTCCCCAGGATTCAAGGACAGGTGGCTGTCAGAGGTAGGAAGTTaGAGTCAATTGCTTGTCAGGGCCTTCCCGAGCTGCCCCGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: PSPGFKDRWLSEVGS*SQLLVRAFPSCPGS Trigger: GGAGCCGGGGCAGCTCGGGAAGGCCCTGACAAGCAATTGACTCCAACTTCCTACCTCTGACAGCCACCTGTCCTTGAATCCTGGGGACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CCA 90 bp | TCACCCTCTGCCACAGGGCCGGCAGAGAGAACGCAGTCTCCACTCTaGAGCTCGAATGGGGAAAATAAATCAGGAGTCGGCCCTGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: SPSATGPAERTQSPL*SSNGENKSGVGPGG Trigger: GCCACCAGGGCCGACTCCTGATTTATTTTCCCCATTCGAGCTCCAGAGTGGAGACTGCGTTCTCTCTGCCGGCCCTGTGGCAGAGGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CCA 90 bp | GAGGAGGCCCTGAACCCTCACCTACGCAGACAGGCAGGGAGCGTCTaGATCCTGAGGGAGGTGTTTATAGCCAGTGGCAAATTCTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: EEALNPHLRRQAGSV*ILREVFIASGKFSS Trigger: CGAGGAGAATTTGCCACTGGCTATAAACACCTCCCTCAGGATCCAGACGCTCCCTGCCTGTCTGCGTAGGTGAGGGTTCAGGGCCTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CCA 90 bp | ATGACATACATACGTGCAGGGTGCTTATGGTACTGGGAGCACCAGTaGCCCAACCAGCTTGAGGAGGCCCTGAACCCTCACCTACGCAGA | + |
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Preference number: 5 (lower is better) Translates to: MTYIRAGCLWYWEHQ*PNQLEEALNPHLRR Trigger: TCTGCGTAGGTGAGGGTTCAGGGCCTCCTCAAGCTGGTTGGGCCACTGGTGCTCCCAGTACCATAAGCACCCTGCACGTATGTATGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 90 bp | TCAAGCTGCAGGGAATCTCACCTCACTGGGCCTGGGGGCAGGCATTaGAATGTGTATTGTACCCAGCCCGGAAGATCCTTCAGATCAGGG | + |
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Preference number: 5 (lower is better) Translates to: SSCRESHLTGPGGRH*NVYCTQPGRSFRSG Trigger: CCCTGATCTGAAGGATCTTCCGGGCTGGGTACAATACACATTTCAATGCCTGCCCCCAGGCCCAGTGAGGTGAGATTCCCTGCAGCTTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 90 bp | CACGGACAGGCCCTGGCCCTTAGACTCTACCACACATTGAGTGAATaGTTAACGGCCGGGTTCTCCTCTGATGGCCTGGTTCAGACTTCA | + |
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Preference number: 5 (lower is better) Translates to: HGQALALRLYHTLSE*LTAGFSSDGLVQTS Trigger: TGAAGTCTGAACCAGGCCATCAGAGGAGAACCCGGCCGTTAATCATTCACTCAATGTGTGGTAGAGTCTAAGGGCCAGGGCCTGTCCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CCA 90 bp | TTCTTTCTGGGATCAGGAAAACAAAGGCCAGGATTGGGGTCAGCATaGAACAGTGGGCAAACAAGAGTGGTAGGAGGCAGGGACCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: FFLGSGKQRPGLGSA*NSGQTRVVGGRDLG Trigger: GCCCAGGTCCCTGCCTCCTACCACTCTTGTTTGCCCACTGTTCCATGCTGACCCCAATCCTGGCCTTTGTTTTCCTGATCCCAGAAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS GCA 90 bp | TACCCAGCCCGGAAGATCCTTCAGATCAGGGAGTTTGGGATGCCCTaGTTTAACCCAAAGGTGTGGACCTTGGCAGTGACCTTGTCAACT | + |
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Preference number: 5 (lower is better) Translates to: YPARKILQIREFGMP*FNPKVWTLAVTLST Trigger: AGTTGACAAGGTCACTGCCAAGGTCCACACCTTTGGGTTAAAGCAGGGCATCCCAAACTCCCTGATCTGAAGGATCTTCCGGGCTGGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CCA 90 bp | TCATACATGCTCGTATACATGACATACATACGTGCAGGGTGCTTATaGTACTGGGAGCACCAGTGGCCCAACCAGCTTGAGGAGGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: SYMLVYMTYIRAGCL*YWEHQWPNQLEEAL Trigger: CAGGGCCTCCTCAAGCTGGTTGGGCCACTGGTGCTCCCAGTACCATAAGCACCCTGCACGTATGTATGTCATGTATACGAGCATGTATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 90 bp | GGAAGGCACAGGTTTACCCTGGGTTTACCCTCAACTCCTCGGGAATaGACCTTTACTTCTCTCAGTCTCCTCATTGTGTGCCGGGCTATG | + |
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Preference number: 5 (lower is better) Translates to: GRHRFTLGLPSTPRE*TFTSLSLLIVCRAM Trigger: CATAGCCCGGCACACAATGAGGAGACTGAGAGAAGTAAAGGTTCATTCCCGAGGAGTTGAGGGTAAACCCAGGGTAAACCTGTGCCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CCA 90 bp | CTTTCAGCTTGGTGGGAGGGTAAGCAGGAAGGCACAGGTTTACCCTaGGTTTACCCTCAACTCCTCGGGAATGAACCTTTACTTCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: LSAWWEGKQEGTGLP*VYPQLLGNEPLLLS Trigger: TGAGAGAAGTAAAGGTTCATTCCCGAGGAGTTGAGGGTAAACCCAGGGTAAACCTGTGCCTTCCTGCTTACCCTCCCACCAAGCTGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CCA 90 bp | CCTGGTGGCTCATCAAAATGCCTCTCTTTAAACCACCACCCTTCCTaGTGCATTGGGGAAGGTGACATTGCTACCTCTGTTCTGCAAAGC | + |
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Preference number: 5 (lower is better) Translates to: PGGSSKCLSLNHHPS*CIGEGDIATSVLQS Trigger: GCTTTGCAGAACAGAGGTAGCAATGTCACCTTCCCCAATGCACCAGGAAGGGTGGTGGTTTAAAGAGAGGCATTTTGATGAGCCACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS GCA 90 bp | GGGTCACTATCTTATTTCATCTTCCTAGTGGGCATGTGCCATAGGTaGCAGCAAAGCCTCATCTTACAGATGAGGAGAGGGACACCCAGA | + |
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Preference number: 5 (lower is better) Translates to: GSLSYFIFLVGMCHR*QQSLILQMRRGTPR Trigger: TCTGGGTGTCCCTCTCCTCATCTGTAAGATGAGGCTTTGCTGGCACCTATGGCACATGCCCACTAGGAAGATGAAATAAGATAGTGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS GCA 90 bp | AAAGAGTCATACATGCTCGTATACATGACATACATACGTGCAGGGTaGTTATGGTACTGGGAGCACCAGTGGCCCAACCAGCTTGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: KESYMLVYMTYIRAG*LWYWEHQWPNQLEE Trigger: CTCCTCAAGCTGGTTGGGCCACTGGTGCTCCCAGTACCATAAGCACCCTGCACGTATGTATGTCATGTATACGAGCATGTATGACTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CCA 90 bp | CTTCAGATCAGGGAGTTTGGGATGCCCTGCTTTAACCCAAAGGTGTaGACCTTGGCAGTGACCTTGTCAACTCCTCAGAAAGTCAAATCA | + |
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Preference number: 5 (lower is better) Translates to: LQIREFGMPCFNPKV*TLAVTLSTPQKVKS Trigger: TGATTTGACTTTCTGAGGAGTTGACAAGGTCACTGCCAAGGTCCACACCTTTGGGTTAAAGCAGGGCATCCCAAACTCCCTGATCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS GCA 90 bp | TCTATGAAAAGAGTCATACATGCTCGTATACATGACATACATACGTaGAGGGTGCTTATGGTACTGGGAGCACCAGTGGCCCAACCAGCT | + |
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Preference number: 5 (lower is better) Translates to: SMKRVIHARIHDIHT*RVLMVLGAPVAQPA Trigger: AGCTGGTTGGGCCACTGGTGCTCCCAGTACCATAAGCACCCTGCACGTATGTATGTCATGTATACGAGCATGTATGACTCTTTTCATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 90 bp | CACCTGCAAATTCATGATCCTGAGTCCACCTCACAGAGTTGGGGGTaGACATGCCATTTCACTCACTCAATAAACATGTATTTTGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: HLQIHDPESTSQSWG*TCHFTHSINMYFAP Trigger: GGGAGCAAAATACATGTTTATTGAGTGAGTGAAATGGCATGTTCACCCCCAACTCTGTGAGGTGGACTCAGGATCATGAATTTGCAGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 90 bp | CTCAGTTTCCTCATCTATGAAAAGAGTCATACATGCTCGTATACATaGCATACATACGTGCAGGGTGCTTATGGTACTGGGAGCACCAGT | + |
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Preference number: 5 (lower is better) Translates to: LSFLIYEKSHTCSYT*HTYVQGAYGTGSTS Trigger: ACTGGTGCTCCCAGTACCATAAGCACCCTGCACGTATGTATGTCATGTATACGAGCATGTATGACTCTTTTCATAGATGAGGAAACTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 90 bp | TCCAATCCAAGATTATCACGGAGAAGGAAGGTGAGTTTTAGGCAATaGGTAGTCAATAAGAAAGTTCCGATTTCCTTTGGAGAAAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: SNPRLSRRRKVSFRQ*VVNKKVPISFGEKG Trigger: TCCTTTTTCTCCAAAGGAAATCGGAACTTTCTTATTGACTACTCATTGCCTAAAACTCACCTTCCTTCTCCGTGATAATCTTGGATTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 72 bp | GCCAGCCCACAAGGGAAGGGTCGGCCCTGTGAGGACTaGGCTTCCCGTCCCCAGGATTCAAGGACAGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: ASPQGKGRPCED*ASRPQDSRTGG Trigger: GCCACCTGTCCTTGAATCCTGGGGACGGGAAGCTCAGTCCTCACAGGGCCGACCCTTCCCTTGTGGGCTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 72 bp | GGGAGCACCAGTGGCCCAACCAGCTTGAGGAGGCCCTaGACCCTCACCTACGCAGACAGGCAGGGAGCGTCT | + |
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Preference number: 6 (lower is better) Translates to: GSTSGPTSLRRP*TLTYADRQGAS Trigger: AGACGCTCCCTGCCTGTCTGCGTAGGTGAGGGTTCAGGGCCTCCTCAAGCTGGTTGGGCCACTGGTGCTCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS GCA 72 bp | GTGGCCACACTGGGCCCCACATTGAGGAGGGCCCTGTaGTTGGCTCAGACCCCCACATGCTGCAGTGACCTC | + |
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Preference number: 6 (lower is better) Translates to: VATLGPTLRRAL*LAQTPTCCSDL Trigger: GAGGTCACTGCAGCATGTGGGGGTCTGAGCCAAGCACAGGGCCCTCCTCAATGTGGGGCCCAGTGTGGCCAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CAA 72 bp | GGCTATGCAACCAGTGTGGCCACACTGGGCCCCACATaGAGGAGGGCCCTGTGCTTGGCTCAGACCCCCACA | + |
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Preference number: 6 (lower is better) Translates to: GYATSVATLGPT*RRALCLAQTPT Trigger: TGTGGGGGTCTGAGCCAAGCACAGGGCCCTCCTCAATGTGGGGCCCAGTGTGGCCACACTGGTTGCATAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 72 bp | CTGCAAAGCCAGCCCACAAGGGAAGGGTCGGCCCTGTaGGGACTGAGCTTCCCGTCCCCAGGATTCAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: LQSQPTREGSAL*GLSFPSPGFKD Trigger: GTCCTTGAATCCTGGGGACGGGAAGCTCAGTCCTCACAGGGCCGACCCTTCCCTTGTGGGCTGGCTTTGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 72 bp | GCTATGCAACCAGTGTGGCCACACTGGGCCCCACATTaGGGAGGGCCCTGTGCTTGGCTCAGACCCCCACAT | + |
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Preference number: 6 (lower is better) Translates to: AMQPVWPHWAPH*GGPCAWLRPPH Trigger: ATGTGGGGGTCTGAGCCAAGCACAGGGCCCTCCTCAATGTGGGGCCCAGTGTGGCCACACTGGTTGCATAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CAA 90 bp | CCCGTCCCCAGGATTCAAGGACAGGTGGCTGTCAGAGGTAGGAAGTaGGAGTCAATTGCTTGTCAGGGCCTTCCCGAGCTGCCCCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: PVPRIQGQVAVRGRK*ESIACQGLPELPRL Trigger: GAGCCGGGGCAGCTCGGGAAGGCCCTGACAAGCAATTGACTCCAACTTCCTACCTCTGACAGCCACCTGTCCTTGAATCCTGGGGACGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 72 bp | CTTATGGTACTGGGAGCACCAGTGGCCCAACCAGCTTaGGGAGGCCCTGAACCCTCACCTACGCAGACAGGC | + |
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Preference number: 6 (lower is better) Translates to: LMVLGAPVAQPA*GGPEPSPTQTG Trigger: GCCTGTCTGCGTAGGTGAGGGTTCAGGGCCTCCTCAAGCTGGTTGGGCCACTGGTGCTCCCAGTACCATAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CCA 72 bp | GGAAATAATCAGCCCGACTCAGTGTGTGGCTCCTGCTaGGGGTGGAAGGTGCTTTCCCCACACCTGCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: GNNQPDSVCGSC*GWKVLSPHLLP Trigger: GGGGAGCAGGTGTGGGGAAAGCACCTTCCACCCCCAGCAGGAGCCACACACTGAGTCGGGCTGATTATTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CAA 90 bp | GGATTCAAGGACAGGTGGCTGTCAGAGGTAGGAAGTTGGAGTCAATaGCTTGTCAGGGCCTTCCCGAGCTGCCCCGGCTCCCTAGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GFKDRWLSEVGSWSQ*LVRAFPSCPGSLAG Trigger: CCCAGCTAGGGAGCCGGGGCAGCTCGGGAAGGCCCTGACAAGCAATTGACTCCAACTTCCTACCTCTGACAGCCACCTGTCCTTGAATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS GCA 72 bp | TATGGTCTTTCCGGAGCCACTACCTCCTTCACCCTCTaGCACAGGGCCGGCAGAGAGAACGCAGTCTCCACT | + |
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Preference number: 6 (lower is better) Translates to: YGLSGATTSFTL*HRAGRENAVST Trigger: AGTGGAGACTGCGTTCTCTCTGCCGGCCCTGTGGCAGAGGGTGAAGGAGGTAGTGGCTCCGGAAAGACCATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS GCA 72 bp | GCAGGAAATAATCAGCCCGACTCAGTGTGTGGCTCCTaGTGGGGGTGGAAGGTGCTTTCCCCACACCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: AGNNQPDSVCGS*WGWKVLSPHLL Trigger: GAGCAGGTGTGGGGAAAGCACCTTCCACCCCCAGCAGGAGCCACACACTGAGTCGGGCTGATTATTTCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CCA 72 bp | ATACGTGCAGGGTGCTTATGGTACTGGGAGCACCAGTaGCCCAACCAGCTTGAGGAGGCCCTGAACCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: IRAGCLWYWEHQ*PNQLEEALNPH Trigger: GTGAGGGTTCAGGGCCTCCTCAAGCTGGTTGGGCCACTGGTGCTCCCAGTACCATAAGCACCCTGCACGTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS GCA 72 bp | GGTGCATTGGGGAAGGTGACATTGCTACCTCTGTTCTaGAAAGCCAGCCCACAAGGGAAGGGTCGGCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: GALGKVTLLPLF*KASPQGKGRPC Trigger: ACAGGGCCGACCCTTCCCTTGTGGGCTGGCTTTGCAGAACAGAGGTAGCAATGTCACCTTCCCCAATGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CAA 72 bp | TTCTCCTCTGATGGCCTGGTTCAGACTTCAGGCCCTTaGGTGAGAAGGGAGTCCCTGTGTTCCCCCAACCCC | + |
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Preference number: 6 (lower is better) Translates to: FSSDGLVQTSGP*VRRESLCSPNP Trigger: GGGGTTGGGGGAACACAGGGACTCCCTTCTCACCAAAGGGCCTGAAGTCTGAACCAGGCCATCAGAGGAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 72 bp | TCCTCGAGGCCATGGGCCCCCACCACTGTGGTGCCATaGGGAAGTCGAAGGTTGAGCGAGCAAAACATGTTT | + |
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Preference number: 6 (lower is better) Translates to: SSRPWAPTTVVP*GSRRLSEQNMF Trigger: AAACATGTTTTGCTCGCTCAACCTTCGACTTCCTCATGGCACCACAGTGGTGGGGGCCCATGGCCTCGAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS GCA 72 bp | AATGAAGGTGCAAGGAGAAGCCAGGGGTATGGATACTaGTCTACCACCCACCCAGGTGTGCCTAGCCGCAAG | + |
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Preference number: 6 (lower is better) Translates to: NEGARRSQGYGY*STTHPGVPSRK Trigger: CTTGCGGCTAGGCACACCTGGGTGGGTGGTAGAGCAGTATCCATACCCCTGGCTTCTCCTTGCACCTTCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CCA 72 bp | CTGAACCCTCACCTACGCAGACAGGCAGGGAGCGTCTaGATCCTGAGGGAGGTGTTTATAGCCAGTGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: LNPHLRRQAGSV*ILREVFIASGK Trigger: TTTGCCACTGGCTATAAACACCTCCCTCAGGATCCAGACGCTCCCTGCCTGTCTGCGTAGGTGAGGGTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CAA 90 bp | CCTCAACTCCTCGGGAATGAACCTTTACTTCTCTCAGTCTCCTCATaGTGTGCCGGGCTATGTTCTCCGTGCTGGAGGTGGAGCAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: PQLLGNEPLLLSVSS*CAGLCSPCWRWSSH Trigger: GTGGCTGCTCCACCTCCAGCACGGAGAACATAGCCCGGCACACAATGAGGAGACTGAGAGAAGTAAAGGTTCATTCCCGAGGAGTTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS GCA 72 bp | CAGCCCGGAAGATCCTTCAGATCAGGGAGTTTGGGATaGCCTGCTTTAACCCAAAGGTGTGGACCTTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: QPGRSFRSGSLG*PALTQRCGPWQ Trigger: CTGCCAAGGTCCACACCTTTGGGTTAAAGCAGGGCATCCCAAACTCCCTGATCTGAAGGATCTTCCGGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CCA 72 bp | GGATTCAAGGACAGGTGGCTGTCAGAGGTAGGAAGTTaGAGTCAATTGCTTGTCAGGGCCTTCCCGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: GFKDRWLSEVGS*SQLLVRAFPSC Trigger: GCAGCTCGGGAAGGCCCTGACAAGCAATTGACTCCAACTTCCTACCTCTGACAGCCACCTGTCCTTGAATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CCA 72 bp | AAAACAAAGGCCAGGATTGGGGTCAGCATGGAACAGTaGGCAAACAAGAGTGGTAGGAGGCAGGGACCTGGG | + |
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Preference number: 6 (lower is better) Translates to: KTKARIGVSMEQ*ANKSGRRQGPG Trigger: CCCAGGTCCCTGCCTCCTACCACTCTTGTTTGCCCACTGTTCCATGCTGACCCCAATCCTGGCCTTTGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CAA 90 bp | TTCAAGCTGCAGGGAATCTCACCTCACTGGGCCTGGGGGCAGGCATaGAAATGTGTATTGTACCCAGCCCGGAAGATCCTTCAGATCAGG | + |
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Preference number: 6 (lower is better) Translates to: FKLQGISPHWAWGQA*KCVLYPARKILQIR Trigger: CCTGATCTGAAGGATCTTCCGGGCTGGGTACAATACACATTTCAATGCCTGCCCCCAGGCCCAGTGAGGTGAGATTCCCTGCAGCTTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 72 bp | GCCCTGGCCCTTAGACTCTACCACACATTGAGTGAATaGTTAACGGCCGGGTTCTCCTCTGATGGCCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: ALALRLYHTLSE*LTAGFSSDGLV Trigger: AACCAGGCCATCAGAGGAGAACCCGGCCGTTAATCATTCACTCAATGTGTGGTAGAGTCTAAGGGCCAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS GCA 72 bp | CGGAAGATCCTTCAGATCAGGGAGTTTGGGATGCCCTaGTTTAACCCAAAGGTGTGGACCTTGGCAGTGACC | + |
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Preference number: 6 (lower is better) Translates to: RKILQIREFGMP*FNPKVWTLAVT Trigger: GGTCACTGCCAAGGTCCACACCTTTGGGTTAAAGCAGGGCATCCCAAACTCCCTGATCTGAAGGATCTTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CCA 72 bp | GGATCAGGAAAACAAAGGCCAGGATTGGGGTCAGCATaGAACAGTGGGCAAACAAGAGTGGTAGGAGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GSGKQRPGLGSA*NSGQTRVVGGR Trigger: CCTGCCTCCTACCACTCTTGTTTGCCCACTGTTCCATGCTGACCCCAATCCTGGCCTTTGTTTTCCTGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CAA 72 bp | TGTACCCAGCCCGGAAGATCCTTCAGATCAGGGAGTTaGGGATGCCCTGCTTTAACCCAAAGGTGTGGACCT | + |
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Preference number: 6 (lower is better) Translates to: CTQPGRSFRSGS*GCPALTQRCGP Trigger: AGGTCCACACCTTTGGGTTAAAGCAGGGCATCCCAAACTCCCTGATCTGAAGGATCTTCCGGGCTGGGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CAA 72 bp | AGGATTCAAGGACAGGTGGCTGTCAGAGGTAGGAAGTaGGAGTCAATTGCTTGTCAGGGCCTTCCCGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: RIQGQVAVRGRK*ESIACQGLPEL Trigger: CAGCTCGGGAAGGCCCTGACAAGCAATTGACTCCAACTTCCTACCTCTGACAGCCACCTGTCCTTGAATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 72 bp | TTTAAACCACCACCCTTCCTGGTGCATTGGGGAAGGTaGCATTGCTACCTCTGTTCTGCAAAGCCAGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: FKPPPFLVHWGR*HCYLCSAKPAH Trigger: GTGGGCTGGCTTTGCAGAACAGAGGTAGCAATGTCACCTTCCCCAATGCACCAGGAAGGGTGGTGGTTTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 72 bp | GTGGCAAATTCTCCTCGGGCTTCCAATTTAAGAATTTaGCTTGACCCTGGGATGCTGCGCCTGGACAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: VANSPRASNLRI*LDPGMLRLDSE Trigger: CTCGCTGTCCAGGCGCAGCATCCCAGGGTCAAGTCAAATTCTTAAATTGGAAGCCCGAGGAGAATTTGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CCA 72 bp | CTCGTATACATGACATACATACGTGCAGGGTGCTTATaGTACTGGGAGCACCAGTGGCCCAACCAGCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: LVYMTYIRAGCL*YWEHQWPNQLE Trigger: CTCAAGCTGGTTGGGCCACTGGTGCTCCCAGTACCATAAGCACCCTGCACGTATGTATGTCATGTATACGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CAA 90 bp | CCACCAATTATGTCTCTGATCCTCAGAGTGAGGCAAGAGCCAGTGTaGCTTTTAATTGCTGGTCGGGTGCATCTGACCCCACTGGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: PPIMSLILRVRQEPV*LLIAGRVHLTPLGF Trigger: GAAACCCAGTGGGGTCAGATGCACCCGACCAGCAATTAAAAGCAACACTGGCTCTTGCCTCACTCTGAGGATCAGAGACATAATTGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS GCA 72 bp | TACATGCTCGTATACATGACATACATACGTGCAGGGTaGTTATGGTACTGGGAGCACCAGTGGCCCAACCAG | + |
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Preference number: 6 (lower is better) Translates to: YMLVYMTYIRAG*LWYWEHQWPNQ Trigger: CTGGTTGGGCCACTGGTGCTCCCAGTACCATAAGCACCCTGCACGTATGTATGTCATGTATACGAGCATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CCA 72 bp | AGGGAGTTTGGGATGCCCTGCTTTAACCCAAAGGTGTaGACCTTGGCAGTGACCTTGTCAACTCCTCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: REFGMPCFNPKV*TLAVTLSTPQK Trigger: TTTCTGAGGAGTTGACAAGGTCACTGCCAAGGTCCACACCTTTGGGTTAAAGCAGGGCATCCCAAACTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CCA 72 bp | TTTGGTTGGGAGGGTCTTGAGTTAAAACCAGGTGTGTaGTCACAAATGACCTGGGGTCAGACCTTTCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: FGWEGLELKPGV*SQMTWGQTFPL Trigger: CAGCGGAAAGGTCTGACCCCAGGTCATTTGTGACCACACACCTGGTTTTAACTCAAGACCCTCCCAACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS GCA 72 bp | AGAGTCATACATGCTCGTATACATGACATACATACGTaGAGGGTGCTTATGGTACTGGGAGCACCAGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RVIHARIHDIHT*RVLMVLGAPVA Trigger: GGCCACTGGTGCTCCCAGTACCATAAGCACCCTGCACGTATGTATGTCATGTATACGAGCATGTATGACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CCA 72 bp | AGAATCTCATTCAAGCTGCAGGGAATCTCACCTCACTaGGCCTGGGGGCAGGCATTGAAATGTGTATTGTAC | + |
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Preference number: 6 (lower is better) Translates to: RISFKLQGISPH*AWGQALKCVLY Trigger: GTACAATACACATTTCAATGCCTGCCCCCAGGCCCAGTGAGGTGAGATTCCCTGCAGCTTGAATGAGATTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 72 bp | TGCCCTGCTTTAACCCAAAGGTGTGGACCTTGGCAGTaGCCTTGTCAACTCCTCAGAAAGTCAAATCACCTT | + |
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Preference number: 6 (lower is better) Translates to: CPALTQRCGPWQ*PCQLLRKSNHL Trigger: AAGGTGATTTGACTTTCTGAGGAGTTGACAAGGTCACTGCCAAGGTCCACACCTTTGGGTTAAAGCAGGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS GCA 72 bp | TCTTATTTCATCTTCCTAGTGGGCATGTGCCATAGGTaGCAGCAAAGCCTCATCTTACAGATGAGGAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: SYFIFLVGMCHR*QQSLILQMRRG Trigger: CCCTCTCCTCATCTGTAAGATGAGGCTTTGCTGGCACCTATGGCACATGCCCACTAGGAAGATGAAATAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CAA 72 bp | TTTGGGATGCCCTGCTTTAACCCAAAGGTGTGGACCTaGGCAGTGACCTTGTCAACTCCTCAGAAAGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: FGMPCFNPKVWT*AVTLSTPQKVK Trigger: TTTGACTTTCTGAGGAGTTGACAAGGTCACTGCCAAGGTCCACACCTTTGGGTTAAAGCAGGGCATCCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CAA 90 bp | ATCAGGGAGTTTGGGATGCCCTGCTTTAACCCAAAGGTGTGGACCTaGGCAGTGACCTTGTCAACTCCTCAGAAAGTCAAATCACCTTTT | + |
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Preference number: 6 (lower is better) Translates to: IREFGMPCFNPKVWT*AVTLSTPQKVKSPF Trigger: AAAAGGTGATTTGACTTTCTGAGGAGTTGACAAGGTCACTGCCAAGGTCCACACCTTTGGGTTAAAGCAGGGCATCCCAAACTCCCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS GCA 72 bp | GGGTCACTATCTTATTTCATCTTCCTAGTGGGCATGTaGCATAGGTGCCAGCAAAGCCTCATCTTACAGATG | + |
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Preference number: 6 (lower is better) Translates to: GSLSYFIFLVGM*HRCQQSLILQM Trigger: CATCTGTAAGATGAGGCTTTGCTGGCACCTATGGCACATGCCCACTAGGAAGATGAAATAAGATAGTGACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CCA 72 bp | TCATCAAAATGCCTCTCTTTAAACCACCACCCTTCCTaGTGCATTGGGGAAGGTGACATTGCTACCTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: SSKCLSLNHHPS*CIGEGDIATSV Trigger: AACAGAGGTAGCAATGTCACCTTCCCCAATGCACCAGGAAGGGTGGTGGTTTAAAGAGAGGCATTTTGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 72 bp | CTCATCTATGAAAAGAGTCATACATGCTCGTATACATaGCATACATACGTGCAGGGTGCTTATGGTACTGGG | + |
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Preference number: 6 (lower is better) Translates to: LIYEKSHTCSYT*HTYVQGAYGTG Trigger: CCCAGTACCATAAGCACCCTGCACGTATGTATGTCATGTATACGAGCATGTATGACTCTTTTCATAGATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 72 bp | ATTCATGATCCTGAGTCCACCTCACAGAGTTGGGGGTaGACATGCCATTTCACTCACTCAATAAACATGTAT | + |
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Preference number: 6 (lower is better) Translates to: IHDPESTSQSWG*TCHFTHSINMY Trigger: ATACATGTTTATTGAGTGAGTGAAATGGCATGTTCACCCCCAACTCTGTGAGGTGGACTCAGGATCATGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS TCA 72 bp | AGATTATCACGGAGAAGGAAGGTGAGTTTTAGGCAATaGGTAGTCAATAAGAAAGTTCCGATTTCCTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: RLSRRRKVSFRQ*VVNKKVPISFG Trigger: TCCAAAGGAAATCGGAACTTTCTTATTGACTACTCATTGCCTAAAACTCACCTTCCTTCTCCGTGATAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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| CDS CAA 72 bp | GATAAATTGGACATTCACATGGGAATAAAAAGATTCTaGACCCCTTCCTCACACCATACACCTAATTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: DKLDIHMGIKRF*TPSSHHTPNSV Trigger: AACAGAATTAGGTGTATGGTGTGAGGAAGGGGTCAAGAATCTTTTTATTCCCATGTGAATGTCCAATTTATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566553.1 |
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