Pregenerated sensors for LINC02010 (Homo sapiens)
Ensembl gene IDs: ENSG00000242671Ensembl transcript IDs: ENST00000470860.2, ENST00000471638.1, ENST00000658020.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCCGGGAGTAGCGGTGTGCAGCCGTATCACTGTCCCACAGAGCAGTaGTTCCTTATAGGCAGAGTGGCCCGGAGTAGCGGTGTACAGCAA | + |
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Preference number: 5 (lower is better) Translates to: PGSSGVQPYHCPTEQ*FLIGRVARSSGVQQ Trigger: TTGCTGTACACCGCTACTCCGGGCCACTCTGCCTATAAGGAAGCACTGCTCTGTGGGACAGTGATACGGCTGCACACCGCTACTCCCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000470860.2 ENST00000658020.1 |
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| CDS GCA 90 bp | CTTATAGGCAGAGTGGCCCGGAGTAGCGGTGTACAGCAAAGTGGCTaGTCCATAGGCAGAACAGACCAGAGCAGCAGCAGCCCCAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: LIGRVARSSGVQQSG*SIGRTDQSSSSPSS Trigger: ACTGCTGGGGCTGCTGCTGCTCTGGTCTGTTCTGCCTATGGAGCAGCCACTTTGCTGTACACCGCTACTCCGGGCCACTCTGCCTATAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000470860.2 ENST00000658020.1 |
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| CDS CCA 90 bp | AAGTTATCCAGCGGATGCAGGTTTATCCCGAATTGGCGTTCAGCCTaGGAGGATTCTTGGCTTCACTCAGGAAAGAATTCAAGCGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: KLSSGCRFIPNWRSA*EDSWLHSGKNSSAS Trigger: GCTGGCGCTTGAATTCTTTCCTGAGTGAAGCCAAGAATCCTCCCAGGCTGAACGCCAATTCGGGATAAACCTGCATCCGCTGGATAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000470860.2 ENST00000471638.1 ENST00000658020.1 |
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| CDS CCA 90 bp | ACTGATGGATCTGGTGAACTGGAAGGGGTTACTAGAGGTGTTTTGTaGGGTGCCACTGACATTCTGTCTCTTTGGGTGTTGGTTACTTGG | + |
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Preference number: 5 (lower is better) Translates to: TDGSGELEGVTRGVL*GATDILSLWVLVTW Trigger: CCAAGTAACCAACACCCAAAGAGACAGAATGTCAGTGGCACCCCACAAAACACCTCTAGTAACCCCTTCCAGTTCACCAGATCCATCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658020.1 |
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| CDS GCA 90 bp | CTCTCTGAACTTCATCTTCAGGAGGCCCAGGTTCCAACCGGTCACTaGTTGTGGTTGTTTAAAGATTCTTTCTCATTGACCACCACTTTC | + |
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Preference number: 5 (lower is better) Translates to: LSELHLQEAQVPTGH*LWLFKDSFSLTTTF Trigger: GAAAGTGGTGGTCAATGAGAAAGAATCTTTAAACAACCACAAGCAGTGACCGGTTGGAACCTGGGCCTCCTGAAGATGAAGTTCAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000470860.2 ENST00000471638.1 ENST00000658020.1 |
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| CDS TCA 90 bp | GCTACAAGTAATAAGGGACTGTTCTGTACACTCACACAAGGATTCTaGATTTCATCCTGTGCTTTGAAACCCATAAGGCCTGGGCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: ATSNKGLFCTLTQGF*ISSCALKPIRPGLS Trigger: GGAAAGCCCAGGCCTTATGGGTTTCAAAGCACAGGATGAAATTCAGAATCCTTGTGTGAGTGTACAGAACAGTCCCTTATTACTTGTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000470860.2 ENST00000471638.1 ENST00000658020.1 |
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| CDS CCA 90 bp | ACAAGGATTCTGAATTTCATCCTGTGCTTTGAAACCCATAAGGCCTaGGCTTTCCAGTCTCCAATTTCATTACTAGGCCTGTCAGATGTA | + |
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Preference number: 5 (lower is better) Translates to: TRILNFILCFETHKA*AFQSPISLLGLSDV Trigger: TACATCTGACAGGCCTAGTAATGAAATTGGAGACTGGAAAGCCCAGGCCTTATGGGTTTCAAAGCACAGGATGAAATTCAGAATCCTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000470860.2 ENST00000471638.1 ENST00000658020.1 |
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| CDS CCA 90 bp | TCCAATTTCATTACTAGGCCTGTCAGATGTAGCCATTCTACTCGGTaGGCCTACCATTCCTCATTCTATTTAAGCAGTTCTATGACAACA | + |
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Preference number: 5 (lower is better) Translates to: SNFITRPVRCSHSTR*AYHSSFYLSSSMTT Trigger: TGTTGTCATAGAACTGCTTAAATAGAATGAGGAATGGTAGGCCCACCGAGTAGAATGGCTACATCTGACAGGCCTAGTAATGAAATTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000470860.2 ENST00000471638.1 ENST00000658020.1 |
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| CDS TCA 90 bp | CATTCTGTCTCTTTGGGTGTTGGTTACTTGGGTGTGTTCACATTGTaGAAATTCATCCAGCGGTTCACTTTTAGTCAAACACAAGCTTTA | + |
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Preference number: 5 (lower is better) Translates to: HSVSLGVGYLGVFTL*KFIQRFTFSQTQAL Trigger: TAAAGCTTGTGTTTGACTAAAAGTGAACCGCTGGATGAATTTTCACAATGTGAACACACCCAAGTAACCAACACCCAAAGAGACAGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658020.1 |
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| CDS CCA 90 bp | CACAAGACAATGTGTTTTGGGAGGCTAGGTGTATTAAATTATATATaGTCACTTAGGGAATTGTTCAAGGAAATACTAACAGTCACAGTA | + |
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Preference number: 5 (lower is better) Translates to: HKTMCFGRLGVLNYI*SLRELFKEILTVTV Trigger: TACTGTGACTGTTAGTATTTCCTTGAACAATTCCCTAAGTGACCATATATAATTTAATACACCTAGCCTCCCAAAACACATTGTCTTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000470860.2 ENST00000471638.1 ENST00000658020.1 |
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| CDS GCA 72 bp | AGCGGTGTGCAGCCGTATCACTGTCCCACAGAGCAGTaGTTCCTTATAGGCAGAGTGGCCCGGAGTAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: SGVQPYHCPTEQ*FLIGRVARSSG Trigger: ACCGCTACTCCGGGCCACTCTGCCTATAAGGAAGCACTGCTCTGTGGGACAGTGATACGGCTGCACACCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000470860.2 ENST00000658020.1 |
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| CDS GCA 72 bp | GCTGACCCAAAGACAGAGTTCCCGGGAGTAGCGGTGTaGAGCCGTATCACTGTCCCACAGAGCAGTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ADPKTEFPGVAV*SRITVPQSSAS Trigger: GGAAGCACTGCTCTGTGGGACAGTGATACGGCTGCACACCGCTACTCCCGGGAACTCTGTCTTTGGGTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000470860.2 ENST00000658020.1 |
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| CDS CAA 90 bp | CGGATGCAGGTTTATCCCGAATTGGCGTTCAGCCTGGGAGGATTCTaGGCTTCACTCAGGAAAGAATTCAAGCGCCAGCCAGCAGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: RMQVYPELAFSLGGF*ASLRKEFKRQPAVK Trigger: TTTCACTGCTGGCTGGCGCTTGAATTCTTTCCTGAGTGAAGCCAAGAATCCTCCCAGGCTGAACGCCAATTCGGGATAAACCTGCATCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000470860.2 ENST00000471638.1 ENST00000658020.1 |
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| CDS CAA 72 bp | GTTTATCCCGAATTGGCGTTCAGCCTGGGAGGATTCTaGGCTTCACTCAGGAAAGAATTCAAGCGCCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: VYPELAFSLGGF*ASLRKEFKRQP Trigger: TGGCTGGCGCTTGAATTCTTTCCTGAGTGAAGCCAAGAATCCTCCCAGGCTGAACGCCAATTCGGGATAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000470860.2 ENST00000471638.1 ENST00000658020.1 |
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| CDS CAA 72 bp | GGATCTGGTGAACTGGAAGGGGTTACTAGAGGTGTTTaGTGGGGTGCCACTGACATTCTGTCTCTTTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: GSGELEGVTRGV*WGATDILSLWV Trigger: CACCCAAAGAGACAGAATGTCAGTGGCACCCCACAAAACACCTCTAGTAACCCCTTCCAGTTCACCAGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658020.1 |
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| CDS CCA 72 bp | ATCAAGTTATCCAGCGGATGCAGGTTTATCCCGAATTaGCGTTCAGCCTGGGAGGATTCTTGGCTTCACTCA | + |
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Preference number: 6 (lower is better) Translates to: IKLSSGCRFIPN*RSAWEDSWLHS Trigger: TGAGTGAAGCCAAGAATCCTCCCAGGCTGAACGCCAATTCGGGATAAACCTGCATCCGCTGGATAACTTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000470860.2 ENST00000471638.1 ENST00000658020.1 |
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| CDS CCA 72 bp | TCTGGTGAACTGGAAGGGGTTACTAGAGGTGTTTTGTaGGGTGCCACTGACATTCTGTCTCTTTGGGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: SGELEGVTRGVL*GATDILSLWVL Trigger: CAACACCCAAAGAGACAGAATGTCAGTGGCACCCCACAAAACACCTCTAGTAACCCCTTCCAGTTCACCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658020.1 |
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| CDS CAA 72 bp | TATCAAGTTATCCAGCGGATGCAGGTTTATCCCGAATaGGCGTTCAGCCTGGGAGGATTCTTGGCTTCACTC | + |
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Preference number: 6 (lower is better) Translates to: YQVIQRMQVYPE*AFSLGGFLASL Trigger: GAGTGAAGCCAAGAATCCTCCCAGGCTGAACGCCAATTCGGGATAAACCTGCATCCGCTGGATAACTTGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000470860.2 ENST00000471638.1 ENST00000658020.1 |
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| CDS CAA 90 bp | CCTACTGATGGATCTGGTGAACTGGAAGGGGTTACTAGAGGTGTTTaGTGGGGTGCCACTGACATTCTGTCTCTTTGGGTGTTGGTTACT | + |
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Preference number: 6 (lower is better) Translates to: PTDGSGELEGVTRGV*WGATDILSLWVLVT Trigger: AGTAACCAACACCCAAAGAGACAGAATGTCAGTGGCACCCCACAAAACACCTCTAGTAACCCCTTCCAGTTCACCAGATCCATCAGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658020.1 |
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| CDS CAA 72 bp | CATCTTCAGGAGGCCCAGGTTCCAACCGGTCACTGCTaGTGGTTGTTTAAAGATTCTTTCTCATTGACCACC | + |
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Preference number: 6 (lower is better) Translates to: HLQEAQVPTGHC*WLFKDSFSLTT Trigger: GGTGGTCAATGAGAAAGAATCTTTAAACAACCACAAGCAGTGACCGGTTGGAACCTGGGCCTCCTGAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000470860.2 ENST00000471638.1 ENST00000658020.1 |
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| CDS TCA 72 bp | GTTTCATGGGAGTGTCAGGAAGAATTGGGGTCTGGATaGAAAGCAGGGGTCAATGACAGTAGACCTTCACTT | + |
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Preference number: 6 (lower is better) Translates to: VSWECQEELGSG*KAGVNDSRPSL Trigger: AAGTGAAGGTCTACTGTCATTGACCCCTGCTTTTCATCCAGACCCCAATTCTTCCTGACACTCCCATGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658020.1 |
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| CDS GCA 72 bp | CTTCATCTTCAGGAGGCCCAGGTTCCAACCGGTCACTaGTTGTGGTTGTTTAAAGATTCTTTCTCATTGACC | + |
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Preference number: 6 (lower is better) Translates to: LHLQEAQVPTGH*LWLFKDSFSLT Trigger: GGTCAATGAGAAAGAATCTTTAAACAACCACAAGCAGTGACCGGTTGGAACCTGGGCCTCCTGAAGATGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000470860.2 ENST00000471638.1 ENST00000658020.1 |
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| CDS CCA 72 bp | CTGAATTTCATCCTGTGCTTTGAAACCCATAAGGCCTaGGCTTTCCAGTCTCCAATTTCATTACTAGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LNFILCFETHKA*AFQSPISLLGL Trigger: CAGGCCTAGTAATGAAATTGGAGACTGGAAAGCCCAGGCCTTATGGGTTTCAAAGCACAGGATGAAATTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000470860.2 ENST00000471638.1 ENST00000658020.1 |
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| CDS CAA 90 bp | GTTCCAACCGGTCACTGCTTGTGGTTGTTTAAAGATTCTTTCTCATaGACCACCACTTTCATATCTCTGAACATGGGTAGGAGTCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: VPTGHCLWLFKDSFS*TTTFISLNMGRSLS Trigger: GCTGAGACTCCTACCCATGTTCAGAGATATGAAAGTGGTGGTCAATGAGAAAGAATCTTTAAACAACCACAAGCAGTGACCGGTTGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000470860.2 ENST00000471638.1 ENST00000658020.1 |
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| CDS CAA 90 bp | TCTGAACTTCATCTTCAGGAGGCCCAGGTTCCAACCGGTCACTGCTaGTGGTTGTTTAAAGATTCTTTCTCATTGACCACCACTTTCATA | + |
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Preference number: 6 (lower is better) Translates to: SELHLQEAQVPTGHC*WLFKDSFSLTTTFI Trigger: TATGAAAGTGGTGGTCAATGAGAAAGAATCTTTAAACAACCACAAGCAGTGACCGGTTGGAACCTGGGCCTCCTGAAGATGAAGTTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000470860.2 ENST00000471638.1 ENST00000658020.1 |
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| CDS CCA 72 bp | ATTACTAGGCCTGTCAGATGTAGCCATTCTACTCGGTaGGCCTACCATTCCTCATTCTATTTAAGCAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: ITRPVRCSHSTR*AYHSSFYLSSS Trigger: AGAACTGCTTAAATAGAATGAGGAATGGTAGGCCCACCGAGTAGAATGGCTACATCTGACAGGCCTAGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000470860.2 ENST00000471638.1 ENST00000658020.1 |
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| CDS TCA 72 bp | AATAAGGGACTGTTCTGTACACTCACACAAGGATTCTaGATTTCATCCTGTGCTTTGAAACCCATAAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: NKGLFCTLTQGF*ISSCALKPIRP Trigger: AGGCCTTATGGGTTTCAAAGCACAGGATGAAATTCAGAATCCTTGTGTGAGTGTACAGAACAGTCCCTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000470860.2 ENST00000471638.1 ENST00000658020.1 |
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| CDS CCA 72 bp | GATACACTACTGACAAATCCACAAGACAATGTGTTTTaGGAGGCTAGGTGTATTAAATTATATATGGTCACT | + |
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Preference number: 6 (lower is better) Translates to: DTLLTNPQDNVF*EARCIKLYMVT Trigger: AGTGACCATATATAATTTAATACACCTAGCCTCCCAAAACACATTGTCTTGTGGATTTGTCAGTAGTGTATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000470860.2 ENST00000471638.1 ENST00000658020.1 |
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